Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:35:24 (3659298): wrapper (7.7.26015): starting
12:35:24 (3659298): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 12:35:24] Arguments: --nthreads 8
[2025-07-27 12:35:24] Threads: 8
[2025-07-27 12:35:24] Checking for CVMFS
[2025-07-27 12:35:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:35:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:35:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:35:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:35:24] 2.13.1.0 681289 14393 169516 148818 3 484 40842173 40960001 15266 16776704 0 37559365 99.896 20106875 47087 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 12:35:24] CVMFS is ok
[2025-07-27 12:35:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:35:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:35:24] Further information can be found at the LHC@home message board.
[2025-07-27 12:35:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:35:24] Checking for apptainer binary...
[2025-07-27 12:35:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:35:24] Running /usr/bin/apptainer --version
[2025-07-27 12:35:24] apptainer version 1.4.1-1.el9
[2025-07-27 12:35:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:35:25] c-212-14.aglt2.org
[2025-07-27 12:35:25] apptainer works
[2025-07-27 12:35:25] Set ATHENA_PROC_NUMBER=8
[2025-07-27 12:35:25] Set ATHENA_CORE_NUMBER=8
[2025-07-27 12:35:25] Starting ATLAS job with PandaID=6746600139
[2025-07-27 12:35:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:59:58]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:59:58]  is_tar=False
[2025-07-27 13:59:58]  lfn=log.45743349._046265.job.log.tgz.1
[2025-07-27 13:59:58]  mtime=0
[2025-07-27 13:59:58]  protocol_id=None
[2025-07-27 13:59:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 13:59:58]  replicas=None
[2025-07-27 13:59:58]  scope=mc23_13p6TeV
[2025-07-27 13:59:58]  status=None
[2025-07-27 13:59:58]  status_code=0
[2025-07-27 13:59:58]  storage_token=
[2025-07-27 13:59:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746600139/log.45743349._046265.job.log.tgz.1
[2025-07-27 13:59:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/8d/log.45743349._046265.job.log.tgz.1
[2025-07-27 13:59:58]  workdir=None
[2025-07-27 13:59:58] ]
[2025-07-27 13:59:58] 2025-07-27 17:59:09,415 | INFO     | transferring file log.45743349._046265.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746600139/log.45743349._046265.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 13:59:58] 2025-07-27 17:59:09,415 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746600139/log.45743349._046265.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._046265.job
[2025-07-27 13:59:58] 2025-07-27 17:59:09,433 | INFO     | adding to output.list: log.45743349._046265.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/8d/log.45743349._046265.job.log.tg
[2025-07-27 13:59:58] 2025-07-27 17:59:09,434 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 13:59:58] 2025-07-27 17:59:09,434 | INFO     | summary of transferred files:
[2025-07-27 13:59:58] 2025-07-27 17:59:09,434 | INFO     |  -- lfn=log.45743349._046265.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 13:59:58] 2025-07-27 17:59:09,434 | INFO     | stage-out finished correctly
[2025-07-27 13:59:58] 2025-07-27 17:59:09,489 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 13:59:58] 2025-07-27 17:59:09,541 | INFO     | job 6746600139 has state=finished
[2025-07-27 13:59:58] 2025-07-27 17:59:09,542 | INFO     | preparing for final server update for job 6746600139 in state='finished'
[2025-07-27 13:59:58] 2025-07-27 17:59:09,542 | INFO     | this job has now completed (state=finished)
[2025-07-27 13:59:58] 2025-07-27 17:59:09,542 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 13:59:58] 2025-07-27 17:59:09,542 | INFO     | log transfer has been attempted: DONE
[2025-07-27 13:59:58] 2025-07-27 17:59:09,542 | INFO     | job 6746600139 has finished - writing final server update
[2025-07-27 13:59:58] 2025-07-27 17:59:09,542 | INFO     | total number of processed events: 400 (read)
[2025-07-27 13:59:58] 2025-07-27 17:59:09,546 | INFO     | executing command: lscpu
[2025-07-27 13:59:58] 2025-07-27 17:59:09,607 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 13:59:58] 2025-07-27 17:59:09,869 | WARNING  | process 3670703 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 13:59:58] 2025-07-27 17:59:09,870 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746600139/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:59:58] 2025-07-27 17:59:10,199 | INFO     | number of running child processes to parent process 3670703: 1
[2025-07-27 13:59:58] 2025-07-27 17:59:10,199 | INFO     | maximum number of monitored processes: 6
[2025-07-27 13:59:58] 2025-07-27 17:59:12,702 | INFO     | monitor loop #368: job 0:6746600139 is in state 'finished'
[2025-07-27 13:59:58] 2025-07-27 17:59:12,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:59:58] 2025-07-27 17:59:13,748 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 13:59:58] 2025-07-27 17:59:13,753 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3093.6375000000003
[2025-07-27 13:59:58] 2025-07-27 17:59:13,764 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746600139/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:59:58] 2025-07-27 17:59:13,764 | INFO     | extracted standard info from prmon json
[2025-07-27 13:59:58] 2025-07-27 17:59:13,764 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:59:58] 2025-07-27 17:59:13,764 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:59:58] 2025-07-27 17:59:13,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:59:58] 2025-07-27 17:59:13,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:59:58] 2025-07-27 17:59:13,766 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:59:58] 2025-07-27 17:59:13,766 | INFO     | sum of square deviations: 130793150.0
[2025-07-27 13:59:58] 2025-07-27 17:59:13,767 | INFO     | sum of deviations: -7560798842.0
[2025-07-27 13:59:58] 2025-07-27 17:59:13,767 | INFO     | mean x: 1753636729.0
[2025-07-27 13:59:58] 2025-07-27 17:59:13,767 | INFO     | mean y: 2624807.3066666666
[2025-07-27 13:59:58] 2025-07-27 17:59:13,767 | INFO     | -- intersect: 101375629050.35661
[2025-07-27 13:59:58] 2025-07-27 17:59:13,767 | INFO     | intersect: 101375629050.35661
[2025-07-27 13:59:58] 2025-07-27 17:59:13,767 | INFO     | chi2: 0.027961957184641673
[2025-07-27 13:59:58] 2025-07-27 17:59:13,767 | INFO     | -- intersect: 101375629050.35661
[2025-07-27 13:59:58] 2025-07-27 17:59:13,767 | INFO     | current memory leak: -57.81 B/s (using 75 data points, chi2=0.03)
[2025-07-27 13:59:58] 2025-07-27 17:59:13,767 | INFO     | could have reported an average CPU frequency of 3001 MHz (6 samples)
[2025-07-27 13:59:58] 2025-07-27 17:59:13,768 | INFO     | ..............................
[2025-07-27 13:59:58] 2025-07-27 17:59:13,768 | INFO     | . Timing measurements:
[2025-07-27 13:59:58] 2025-07-27 17:59:13,768 | INFO     | . get job = 0 s
[2025-07-27 13:59:58] 2025-07-27 17:59:13,768 | INFO     | . initial setup = 2 s
[2025-07-27 13:59:58] 2025-07-27 17:59:13,768 | INFO     | . payload setup = 7 s
[2025-07-27 13:59:58] 2025-07-27 17:59:13,768 | INFO     | . stage-in = 0 s
[2025-07-27 13:59:58] 2025-07-27 17:59:13,768 | INFO     | . payload execution = 4981 s
[2025-07-27 13:59:58] 2025-07-27 17:59:13,768 | INFO     | . stage-out = 0 s
[2025-07-27 13:59:58] 2025-07-27 17:59:13,768 | INFO     | . log creation = 0 s
[2025-07-27 13:59:58] 2025-07-27 17:59:13,768 | INFO     | ..............................
[2025-07-27 13:59:58] 2025-07-27 17:59:14,174 | INFO     | 
[2025-07-27 13:59:58] 2025-07-27 17:59:14,174 | INFO     | job summary report
[2025-07-27 13:59:58] 2025-07-27 17:59:14,174 | INFO     | --------------------------------------------------
[2025-07-27 13:59:58] 2025-07-27 17:59:14,174 | INFO     | PanDA job id: 6746600139
[2025-07-27 13:59:58] 2025-07-27 17:59:14,174 | INFO     | task id: 45743349
[2025-07-27 13:59:58] 2025-07-27 17:59:14,174 | INFO     | errors: (none)
[2025-07-27 13:59:58] 2025-07-27 17:59:14,174 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:59:58] 2025-07-27 17:59:14,174 | INFO     | pilot state: finished 
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | transexitcode: 0
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | exeerrorcode: 0
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | exeerrordiag: 
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | exitcode: 0
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | exitmsg: OK
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | cpuconsumptiontime: 36833 s
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | nevents: 400
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | neventsw: 0
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | pid: 3670703
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | pgrp: 3670703
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | corecount: 8
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | event service: False
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | sizes: {0: 2397423, 6: 2397685, 11: 2397713, 4993: 2423931, 4995: 2432985, 5000: 2433123}
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | --------------------------------------------------
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | 
[2025-07-27 13:59:58] 2025-07-27 17:59:14,175 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 13:59:58] 2025-07-27 17:59:14,194 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,194 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,194 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,194 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,194 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,194 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | job 6746600139 has completed (purged errors)
[2025-07-27 13:59:58] 2025-07-27 17:59:14,195 | INFO     | overall cleanup function is called
[2025-07-27 13:59:58] 2025-07-27 17:59:15,203 | INFO     | --- collectZombieJob: --- 10, [3670703]
[2025-07-27 13:59:58] 2025-07-27 17:59:15,203 | INFO     | zombie collector waiting for pid 3670703
[2025-07-27 13:59:58] 2025-07-27 17:59:15,203 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:59:58] 2025-07-27 17:59:15,203 | INFO     | collected zombie processes
[2025-07-27 13:59:58] 2025-07-27 17:59:15,203 | INFO     | will attempt to kill all subprocesses of pid=3670703
[2025-07-27 13:59:58] 2025-07-27 17:59:15,539 | INFO     | process IDs to be killed: [3670703] (in reverse order)
[2025-07-27 13:59:58] 2025-07-27 17:59:15,661 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:59:58] 2025-07-27 17:59:15,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:59:58] 2025-07-27 17:59:15,674 | INFO     | did not find any defunct processes belonging to 3670703
[2025-07-27 13:59:58] 2025-07-27 17:59:15,684 | INFO     | did not find any defunct processes belonging to 3670703
[2025-07-27 13:59:58] 2025-07-27 17:59:15,685 | INFO     | ready for new job
[2025-07-27 13:59:58] 2025-07-27 17:59:15,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:59:58] 2025-07-27 17:59:15,686 | INFO     | ***************************************
[2025-07-27 13:59:58] 2025-07-27 17:59:15,686 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:59:58] 2025-07-27 17:59:15,686 | INFO     | ***************************************
[2025-07-27 13:59:58] 2025-07-27 17:59:15,686 | INFO     | 
[2025-07-27 13:59:58] 2025-07-27 17:59:15,691 | INFO     | architecture information:
[2025-07-27 13:59:58] 2025-07-27 17:59:15,691 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:59:58] 2025-07-27 17:59:15,707 | INFO     | cat /etc/os-release:
[2025-07-27 13:59:58] NAME="CentOS Linux"
[2025-07-27 13:59:58] VERSION="7 (Core)"
[2025-07-27 13:59:58] ID="centos"
[2025-07-27 13:59:58] ID_LIKE="rhel fedora"
[2025-07-27 13:59:58] VERSION_ID="7"
[2025-07-27 13:59:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:59:58] ANSI_COLOR="0;31"
[2025-07-27 13:59:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:59:58] HOME_URL="https://www.centos.org/"
[2025-07-27 13:59:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:59:58] 
[2025-07-27 13:59:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:59:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:59:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:59:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:59:58] 
[2025-07-27 13:59:58] 2025-07-27 17:59:15,707 | INFO     | ***************************************
[2025-07-27 13:59:58] 2025-07-27 17:59:16,210 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 13:59:58] 2025-07-27 17:59:16,224 | INFO     | sufficient remaining disk space (129112211456 B)
[2025-07-27 13:59:58] 2025-07-27 17:59:16,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:59:58] 2025-07-27 17:59:16,225 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:59:58] 2025-07-27 17:59:16,225 | INFO     | update_server=False
[2025-07-27 13:59:58] 2025-07-27 17:59:16,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:59:58] 2025-07-27 17:59:16,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:59:58] 2025-07-27 17:59:16,225 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:59:58] 2025-07-27 17:59:16,226 | INFO     | aborting loop
[2025-07-27 13:59:58] 2025-07-27 17:59:16,755 | INFO     | all data control threads have been joined
[2025-07-27 13:59:58] 2025-07-27 17:59:17,230 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:17,231 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:17,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:59:58] 2025-07-27 17:59:17,623 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:17,639 | INFO     | all payload control threads have been joined
[2025-07-27 13:59:58] 2025-07-27 17:59:17,744 | INFO     | all job control threads have been joined
[2025-07-27 13:59:58] 2025-07-27 17:59:17,760 | INFO     | [data] control thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:17,805 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:17,858 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:17,860 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:18,092 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:18,097 | INFO     | [job] validate thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:18,465 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:18,644 | INFO     | [payload] control thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:18,729 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:18,749 | INFO     | [job] control thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:18,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:59:58] 2025-07-27 17:59:19,499 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:19,849 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:20,231 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:59:58] 2025-07-27 17:59:21,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139946525824832)>', '<ExcThread(monitor, started 139945737975552)>']
[2025-07-27 13:59:58] 2025-07-27 17:59:26,462 | INFO     | all workflow threads have been joined
[2025-07-27 13:59:58] 2025-07-27 17:59:26,462 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:59:58] 2025-07-27 17:59:26,462 | INFO     | traces error code: 0
[2025-07-27 13:59:58] 2025-07-27 17:59:26,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:59:58] 2025-07-27 17:59:46,338 | INFO     | PID=3662886 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:59:58] 2025-07-27 17:59:46,338 | INFO     | .. there are 15 such processes running
[2025-07-27 13:59:58] 2025-07-27 17:59:46,339 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:59:58] 2025-07-27 17:59:46,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:59:58] 2025-07-27 17:59:46,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:59:58] 2025-07-27 17:59:46,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:59:58] 2025-07-27 17:59:46,339 | INFO     | [monitor] control thread has ended
[2025-07-27 13:59:58] 2025-07-27 17:59:46,520 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:59:58] 2025-07-27 17:59:46,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:59:58] 2025-07-27 17:59:46,527 [wrapper] pilotpid: 3662886
[2025-07-27 13:59:58] 2025-07-27 17:59:46,530 [wrapper] Pilot exit status: 0
[2025-07-27 13:59:58] 2025-07-27 17:59:46,544 [wrapper] pandaids: 6746600139
[2025-07-27 13:59:58] 2025-07-27 17:59:46,624 [wrapper] cleanup supervisor_pilot 3819327 3662887
[2025-07-27 13:59:58] 2025-07-27 17:59:46,627 [wrapper] Test setup, not cleaning
[2025-07-27 13:59:58] 2025-07-27 17:59:46,630 [wrapper] apfmon messages muted
[2025-07-27 13:59:58] 2025-07-27 17:59:46,633 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:59:58] 2025-07-27 17:59:46,635 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:59:58]  *** Error codes and diagnostics ***
[2025-07-27 13:59:58]     "exeErrorCode": 0,
[2025-07-27 13:59:58]     "exeErrorDiag": "",
[2025-07-27 13:59:58]     "pilotErrorCode": 0,
[2025-07-27 13:59:58]     "pilotErrorDiag": "",
[2025-07-27 13:59:58]  *** Listing of results directory ***
[2025-07-27 13:59:58] total 355316
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 04:09 pilot3.tar.gz
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 04:30 queuedata.json
[2025-07-27 13:59:58] -rwx------. 1 boincer umatlas     36292 Jul 27 04:31 runpilot2-wrapper.sh
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas       100 Jul 27 12:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:59:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 12:35 run_atlas
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas       105 Jul 27 12:35 job.xml
[2025-07-27 13:59:58] -rw-r--r--. 2 boincer umatlas 145658287 Jul 27 12:35 EVNT.45743347._000997.pool.root.1
[2025-07-27 13:59:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:35 start_atlas.sh
[2025-07-27 13:59:58] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 12:35 shared
[2025-07-27 13:59:58] -rw-r--r--. 2 boincer umatlas    542901 Jul 27 12:35 input.tar.gz
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas         0 Jul 27 12:35 boinc_lockfile
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 12:35 pandaJob.out
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas    980125 Jul 27 12:35 agis_schedconf.cvmfs.json
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas   1593052 Jul 27 12:35 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:59:58] drwx------. 4 boincer umatlas      4096 Jul 27 12:35 pilot3
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 13:57 init_data.xml
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas 212717240 Jul 27 13:58 HITS.45743349._046265.pool.root.1
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas       529 Jul 27 13:58 boinc_task_state.xml
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas      1032 Jul 27 13:59 memory_monitor_summary.json
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas    306854 Jul 27 13:59 log.45743349._046265.job.log.tgz.1
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas      7771 Jul 27 13:59 heartbeat.json
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas       823 Jul 27 13:59 pilotlog.txt
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas        95 Jul 27 13:59 pilot_heartbeat.json
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas    488463 Jul 27 13:59 log.45743349._046265.job.log.1
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas       357 Jul 27 13:59 output.list
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas       620 Jul 27 13:59 runtime_log
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas    819200 Jul 27 13:59 result.tar.gz
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas       651 Jul 27 13:59 z9PLDm1xB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdmULDmICbPDm.diag
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 13:59 runtime_log.err
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas        27 Jul 27 13:59 wrapper_checkpoint.txt
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 13:59 boinc_mmap_file
[2025-07-27 13:59:58] -rw-r--r--. 1 boincer umatlas     21592 Jul 27 13:59 stderr.txt
[2025-07-27 13:59:58] HITS file was successfully produced:
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas 212717240 Jul 27 13:58 shared/HITS.pool.root.1
[2025-07-27 13:59:58]  *** Contents of shared directory: ***
[2025-07-27 13:59:58] total 351332
[2025-07-27 13:59:58] -rw-r--r--. 2 boincer umatlas 145658287 Jul 27 12:35 ATLAS.root_0
[2025-07-27 13:59:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:35 start_atlas.sh
[2025-07-27 13:59:58] -rw-r--r--. 2 boincer umatlas    542901 Jul 27 12:35 input.tar.gz
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas 212717240 Jul 27 13:58 HITS.pool.root.1
[2025-07-27 13:59:58] -rw-------. 1 boincer umatlas    819200 Jul 27 13:59 result.tar.gz
14:00:00 (3659298): run_atlas exited; CPU time 36987.644263
14:00:00 (3659298): called boinc_finish(0)

</stderr_txt>
]]>

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