Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:31:48 (24147): wrapper (7.7.26015): starting
12:31:48 (24147): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 12:31:48] Arguments: --nthreads 12
[2025-07-27 12:31:48] Threads: 12
[2025-07-27 12:31:48] Checking for CVMFS
[2025-07-27 12:31:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:31:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:31:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:31:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:31:49] 2.11.2.0 25590 12926 78680 148818 2 59 14768378 20275201 1 130560 0 7318873 99.989 442468 41959 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 12:31:49] CVMFS is ok
[2025-07-27 12:31:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:31:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:31:49] Further information can be found at the LHC@home message board.
[2025-07-27 12:31:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:31:49] Checking for apptainer binary...
[2025-07-27 12:31:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:31:49] Running /usr/bin/apptainer --version
[2025-07-27 12:31:49] apptainer version 1.3.2-1.el7
[2025-07-27 12:31:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:31:50] c-205-24.aglt2.org
[2025-07-27 12:31:50] apptainer works
[2025-07-27 12:31:50] Set ATHENA_PROC_NUMBER=12
[2025-07-27 12:31:50] Set ATHENA_CORE_NUMBER=12
[2025-07-27 12:31:50] Starting ATLAS job with PandaID=6746570993
[2025-07-27 12:31:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:57:03]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:57:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 13:57:03]  replicas=None
[2025-07-27 13:57:03]  scope=mc23_13p6TeV
[2025-07-27 13:57:03]  status=None
[2025-07-27 13:57:03]  status_code=0
[2025-07-27 13:57:03]  storage_token=
[2025-07-27 13:57:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746570993/log.45759290._000033.job.log.tgz.1
[2025-07-27 13:57:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/d8/log.45759290._000033.job.log.tgz.1
[2025-07-27 13:57:03]  workdir=None
[2025-07-27 13:57:03] ]
[2025-07-27 13:57:03] 2025-07-27 17:56:20,892 | INFO     | transferring file log.45759290._000033.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746570993/log.45759290._000033.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 13:57:03] 2025-07-27 17:56:20,892 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746570993/log.45759290._000033.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759290._000033.job
[2025-07-27 13:57:03] 2025-07-27 17:56:20,914 | INFO     | adding to output.list: log.45759290._000033.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/d8/log.45759290._000033.job.log.tg
[2025-07-27 13:57:03] 2025-07-27 17:56:20,915 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 13:57:03] 2025-07-27 17:56:20,915 | INFO     | summary of transferred files:
[2025-07-27 13:57:03] 2025-07-27 17:56:20,915 | INFO     |  -- lfn=log.45759290._000033.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 13:57:03] 2025-07-27 17:56:20,915 | INFO     | stage-out finished correctly
[2025-07-27 13:57:03] 2025-07-27 17:56:22,455 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 13:57:03] 2025-07-27 17:56:23,997 | WARNING  | process 1839 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 13:57:03] 2025-07-27 17:56:23,997 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746570993/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:57:03] 2025-07-27 17:56:24,082 | INFO     | number of running child processes to parent process 1839: 1
[2025-07-27 13:57:03] 2025-07-27 17:56:24,082 | INFO     | maximum number of monitored processes: 6
[2025-07-27 13:57:03] 2025-07-27 17:56:24,529 | INFO     | PID=27776 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 13:57:03] 2025-07-27 17:56:24,536 | INFO     | job 6746570993 has state=finished
[2025-07-27 13:57:03] 2025-07-27 17:56:24,536 | INFO     | preparing for final server update for job 6746570993 in state='finished'
[2025-07-27 13:57:03] 2025-07-27 17:56:25,064 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 13:57:03] 2025-07-27 17:56:25,064 | INFO     | this job has now completed (state=finished)
[2025-07-27 13:57:03] 2025-07-27 17:56:25,064 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 13:57:03] 2025-07-27 17:56:25,064 | INFO     | log transfer has been attempted: DONE
[2025-07-27 13:57:03] 2025-07-27 17:56:25,064 | INFO     | job 6746570993 has finished - writing final server update
[2025-07-27 13:57:03] 2025-07-27 17:56:25,065 | INFO     | total number of processed events: 400 (read)
[2025-07-27 13:57:03] 2025-07-27 17:56:25,066 | INFO     | executing command: lscpu
[2025-07-27 13:57:03] 2025-07-27 17:56:25,092 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 13:57:03] 2025-07-27 17:56:26,585 | INFO     | monitor loop #378: job 0:6746570993 is in state 'finished'
[2025-07-27 13:57:03] 2025-07-27 17:56:26,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:57:03] 2025-07-27 17:56:29,088 | INFO     | monitor loop #379: job 0:6746570993 is in state 'finished'
[2025-07-27 13:57:03] 2025-07-27 17:56:29,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:57:03] 2025-07-27 17:56:30,853 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 13:57:03] 2025-07-27 17:56:30,857 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-27 13:57:03] 2025-07-27 17:56:30,859 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746570993/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:57:03] 2025-07-27 17:56:30,860 | INFO     | extracted standard info from prmon json
[2025-07-27 13:57:03] 2025-07-27 17:56:30,860 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:57:03] 2025-07-27 17:56:30,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:57:03] 2025-07-27 17:56:30,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:57:03] 2025-07-27 17:56:30,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:57:03] 2025-07-27 17:56:30,862 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:57:03] 2025-07-27 17:56:30,862 | INFO     | sum of square deviations: 136095575.0
[2025-07-27 13:57:03] 2025-07-27 17:56:30,863 | INFO     | sum of deviations: -9464612685.0
[2025-07-27 13:57:03] 2025-07-27 17:56:30,863 | INFO     | mean x: 1753636548.5
[2025-07-27 13:57:03] 2025-07-27 17:56:30,863 | INFO     | mean y: 2825586.552631579
[2025-07-27 13:57:03] 2025-07-27 17:56:30,863 | INFO     | -- intersect: 121957494001.10406
[2025-07-27 13:57:03] 2025-07-27 17:56:30,863 | INFO     | intersect: 121957494001.10406
[2025-07-27 13:57:03] 2025-07-27 17:56:30,863 | INFO     | chi2: 0.14092657622118643
[2025-07-27 13:57:03] 2025-07-27 17:56:30,863 | INFO     | -- intersect: 121957494001.10406
[2025-07-27 13:57:03] 2025-07-27 17:56:30,864 | INFO     | current memory leak: -69.54 B/s (using 76 data points, chi2=0.14)
[2025-07-27 13:57:03] 2025-07-27 17:56:30,864 | INFO     | could have reported an average CPU frequency of 2036 MHz (6 samples)
[2025-07-27 13:57:03] 2025-07-27 17:56:30,864 | INFO     | ..............................
[2025-07-27 13:57:03] 2025-07-27 17:56:30,864 | INFO     | . Timing measurements:
[2025-07-27 13:57:03] 2025-07-27 17:56:30,864 | INFO     | . get job = 0 s
[2025-07-27 13:57:03] 2025-07-27 17:56:30,864 | INFO     | . initial setup = 2 s
[2025-07-27 13:57:03] 2025-07-27 17:56:30,864 | INFO     | . payload setup = 9 s
[2025-07-27 13:57:03] 2025-07-27 17:56:30,865 | INFO     | . stage-in = 0 s
[2025-07-27 13:57:03] 2025-07-27 17:56:30,865 | INFO     | . payload execution = 5026 s
[2025-07-27 13:57:03] 2025-07-27 17:56:30,865 | INFO     | . stage-out = 0 s
[2025-07-27 13:57:03] 2025-07-27 17:56:30,865 | INFO     | . log creation = 0 s
[2025-07-27 13:57:03] 2025-07-27 17:56:30,865 | INFO     | ..............................
[2025-07-27 13:57:03] 2025-07-27 17:56:31,041 | INFO     | 
[2025-07-27 13:57:03] 2025-07-27 17:56:31,041 | INFO     | job summary report
[2025-07-27 13:57:03] 2025-07-27 17:56:31,041 | INFO     | --------------------------------------------------
[2025-07-27 13:57:03] 2025-07-27 17:56:31,041 | INFO     | PanDA job id: 6746570993
[2025-07-27 13:57:03] 2025-07-27 17:56:31,041 | INFO     | task id: 45759290
[2025-07-27 13:57:03] 2025-07-27 17:56:31,042 | INFO     | errors: (none)
[2025-07-27 13:57:03] 2025-07-27 17:56:31,042 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:57:03] 2025-07-27 17:56:31,042 | INFO     | pilot state: finished 
[2025-07-27 13:57:03] 2025-07-27 17:56:31,042 | INFO     | transexitcode: 0
[2025-07-27 13:57:03] 2025-07-27 17:56:31,042 | INFO     | exeerrorcode: 0
[2025-07-27 13:57:03] 2025-07-27 17:56:31,042 | INFO     | exeerrordiag: 
[2025-07-27 13:57:03] 2025-07-27 17:56:31,043 | INFO     | exitcode: 0
[2025-07-27 13:57:03] 2025-07-27 17:56:31,043 | INFO     | exitmsg: OK
[2025-07-27 13:57:03] 2025-07-27 17:56:31,043 | INFO     | cpuconsumptiontime: 54942 s
[2025-07-27 13:57:03] 2025-07-27 17:56:31,043 | INFO     | nevents: 400
[2025-07-27 13:57:03] 2025-07-27 17:56:31,043 | INFO     | neventsw: 0
[2025-07-27 13:57:03] 2025-07-27 17:56:31,043 | INFO     | pid: 1839
[2025-07-27 13:57:03] 2025-07-27 17:56:31,043 | INFO     | pgrp: 1839
[2025-07-27 13:57:03] 2025-07-27 17:56:31,044 | INFO     | corecount: 12
[2025-07-27 13:57:03] 2025-07-27 17:56:31,044 | INFO     | event service: False
[2025-07-27 13:57:03] 2025-07-27 17:56:31,044 | INFO     | sizes: {0: 2397461, 5: 2397723, 11: 2397779, 5039: 2424044, 5040: 2433042, 5042: 2433098, 5050: 2433420}
[2025-07-27 13:57:03] 2025-07-27 17:56:31,044 | INFO     | --------------------------------------------------
[2025-07-27 13:57:03] 2025-07-27 17:56:31,044 | INFO     | 
[2025-07-27 13:57:03] 2025-07-27 17:56:31,045 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 13:57:03] 2025-07-27 17:56:31,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,069 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,069 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,070 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,070 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,070 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,071 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,071 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:57:03] 2025-07-27 17:56:31,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,072 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:57:03] 2025-07-27 17:56:31,072 | INFO     | job 6746570993 has completed (purged errors)
[2025-07-27 13:57:03] 2025-07-27 17:56:31,072 | INFO     | overall cleanup function is called
[2025-07-27 13:57:03] 2025-07-27 17:56:32,080 | INFO     | --- collectZombieJob: --- 10, [1839]
[2025-07-27 13:57:03] 2025-07-27 17:56:32,080 | INFO     | zombie collector waiting for pid 1839
[2025-07-27 13:57:03] 2025-07-27 17:56:32,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:57:03] 2025-07-27 17:56:32,081 | INFO     | collected zombie processes
[2025-07-27 13:57:03] 2025-07-27 17:56:32,081 | INFO     | will attempt to kill all subprocesses of pid=1839
[2025-07-27 13:57:03] 2025-07-27 17:56:32,171 | INFO     | process IDs to be killed: [1839] (in reverse order)
[2025-07-27 13:57:03] 2025-07-27 17:56:32,227 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:57:03] 2025-07-27 17:56:32,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:57:03] 2025-07-27 17:56:32,230 | INFO     | did not find any defunct processes belonging to 1839
[2025-07-27 13:57:03] 2025-07-27 17:56:32,232 | INFO     | did not find any defunct processes belonging to 1839
[2025-07-27 13:57:03] 2025-07-27 17:56:32,232 | INFO     | ready for new job
[2025-07-27 13:57:03] 2025-07-27 17:56:32,233 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:57:03] 2025-07-27 17:56:32,234 | INFO     | ***************************************
[2025-07-27 13:57:03] 2025-07-27 17:56:32,234 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:57:03] 2025-07-27 17:56:32,234 | INFO     | ***************************************
[2025-07-27 13:57:03] 2025-07-27 17:56:32,234 | INFO     | 
[2025-07-27 13:57:03] 2025-07-27 17:56:32,235 | INFO     | architecture information:
[2025-07-27 13:57:03] 2025-07-27 17:56:32,235 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:57:03] 2025-07-27 17:56:32,252 | INFO     | cat /etc/os-release:
[2025-07-27 13:57:03] NAME="CentOS Linux"
[2025-07-27 13:57:03] VERSION="7 (Core)"
[2025-07-27 13:57:03] ID="centos"
[2025-07-27 13:57:03] ID_LIKE="rhel fedora"
[2025-07-27 13:57:03] VERSION_ID="7"
[2025-07-27 13:57:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:57:03] ANSI_COLOR="0;31"
[2025-07-27 13:57:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:57:03] HOME_URL="https://www.centos.org/"
[2025-07-27 13:57:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:57:03] 
[2025-07-27 13:57:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:57:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:57:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:57:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:57:03] 
[2025-07-27 13:57:03] 2025-07-27 17:56:32,252 | INFO     | ***************************************
[2025-07-27 13:57:03] 2025-07-27 17:56:32,755 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 13:57:03] 2025-07-27 17:56:32,774 | INFO     | sufficient remaining disk space (29343350784 B)
[2025-07-27 13:57:03] 2025-07-27 17:56:32,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:57:03] 2025-07-27 17:56:32,775 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:57:03] 2025-07-27 17:56:32,775 | INFO     | update_server=False
[2025-07-27 13:57:03] 2025-07-27 17:56:32,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:57:03] 2025-07-27 17:56:32,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:57:03] 2025-07-27 17:56:32,776 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:57:03] 2025-07-27 17:56:32,776 | INFO     | aborting loop
[2025-07-27 13:57:03] 2025-07-27 17:56:33,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:57:03] 2025-07-27 17:56:33,328 | INFO     | all data control threads have been joined
[2025-07-27 13:57:03] 2025-07-27 17:56:33,697 | INFO     | all job control threads have been joined
[2025-07-27 13:57:03] 2025-07-27 17:56:33,779 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:33,781 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:33,782 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:33,895 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:33,987 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:34,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:57:03] 2025-07-27 17:56:34,257 | INFO     | all payload control threads have been joined
[2025-07-27 13:57:03] 2025-07-27 17:56:34,333 | INFO     | [data] control thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:34,472 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:34,603 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:34,704 | INFO     | [job] control thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:34,719 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:35,076 | INFO     | [job] validate thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:35,081 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:35,262 | INFO     | [payload] control thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:36,036 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:37,050 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:43,432 | INFO     | job.realtimelogging is not enabled
[2025-07-27 13:57:03] 2025-07-27 17:56:44,438 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:57:03] 2025-07-27 17:56:46,463 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139779973412672)>', '<ExcThread(monitor, started 139778997593856)>']
[2025-07-27 13:57:03] 2025-07-27 17:56:51,488 | INFO     | all workflow threads have been joined
[2025-07-27 13:57:03] 2025-07-27 17:56:51,488 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:57:03] 2025-07-27 17:56:51,488 | INFO     | traces error code: 0
[2025-07-27 13:57:03] 2025-07-27 17:56:51,489 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:57:03] 2025-07-27 17:57:02,727 | INFO     | PID=27776 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 13:57:03] 2025-07-27 17:57:02,728 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:57:03] 2025-07-27 17:57:02,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:57:03] 2025-07-27 17:57:02,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:57:03] 2025-07-27 17:57:02,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:57:03] 2025-07-27 17:57:02,728 | INFO     | [monitor] control thread has ended
[2025-07-27 13:57:03] 2025-07-27 17:57:02,817 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:57:03] 2025-07-27 17:57:02,821 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:57:03] 2025-07-27 17:57:02,825 [wrapper] pilotpid: 27776
[2025-07-27 13:57:03] 2025-07-27 17:57:02,829 [wrapper] Pilot exit status: 0
[2025-07-27 13:57:03] 2025-07-27 17:57:02,845 [wrapper] pandaids: 6746570993
[2025-07-27 13:57:03] 2025-07-27 17:57:02,887 [wrapper] cleanup supervisor_pilot 23538 27777
[2025-07-27 13:57:03] 2025-07-27 17:57:02,891 [wrapper] Test setup, not cleaning
[2025-07-27 13:57:03] 2025-07-27 17:57:02,895 [wrapper] apfmon messages muted
[2025-07-27 13:57:03] 2025-07-27 17:57:02,899 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:57:03] 2025-07-27 17:57:02,902 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:57:03]  *** Error codes and diagnostics ***
[2025-07-27 13:57:03]     "exeErrorCode": 0,
[2025-07-27 13:57:03]     "exeErrorDiag": "",
[2025-07-27 13:57:03]     "pilotErrorCode": 0,
[2025-07-27 13:57:03]     "pilotErrorDiag": "",
[2025-07-27 13:57:03]  *** Listing of results directory ***
[2025-07-27 13:57:03] total 419448
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 04:09 pilot3.tar.gz
[2025-07-27 13:57:03] -rwx------ 1 boincer umatlas     36292 Jul 27 04:23 runpilot2-wrapper.sh
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 04:23 queuedata.json
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas       100 Jul 27 12:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:57:03] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 12:31 run_atlas
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas       105 Jul 27 12:31 job.xml
[2025-07-27 13:57:03] -rw-r--r-- 2 boincer umatlas 245880117 Jul 27 12:31 EVNT.45759282._000004.pool.root.1
[2025-07-27 13:57:03] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:31 start_atlas.sh
[2025-07-27 13:57:03] drwxrwx--x 2 boincer umatlas      4096 Jul 27 12:31 shared
[2025-07-27 13:57:03] -rw-r--r-- 2 boincer umatlas    542877 Jul 27 12:31 input.tar.gz
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas         0 Jul 27 12:31 boinc_lockfile
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas      2555 Jul 27 12:31 pandaJob.out
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas    980125 Jul 27 12:32 agis_schedconf.cvmfs.json
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas   1593052 Jul 27 12:32 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:57:03] drwx------ 4 boincer umatlas      4096 Jul 27 12:32 pilot3
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 13:49 init_data.xml
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas 178074040 Jul 27 13:55 HITS.45759290._000033.pool.root.1
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas        95 Jul 27 13:56 pilot_heartbeat.json
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas       529 Jul 27 13:56 boinc_task_state.xml
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas      1049 Jul 27 13:56 memory_monitor_summary.json
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas    361376 Jul 27 13:56 log.45759290._000033.job.log.tgz.1
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas      7843 Jul 27 13:56 heartbeat.json
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 13:56 boinc_mmap_file
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas        27 Jul 27 13:56 wrapper_checkpoint.txt
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas       745 Jul 27 13:57 pilotlog.txt
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas    479398 Jul 27 13:57 log.45759290._000033.job.log.1
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas       357 Jul 27 13:57 output.list
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas       620 Jul 27 13:57 runtime_log
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas    860160 Jul 27 13:57 result.tar.gz
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas       659 Jul 27 13:57 TVMLDmGqB07n9Rq4apOajLDm4fhM0noT9bVof3QYDmfG2KDm8btxwm.diag
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 13:57 runtime_log.err
[2025-07-27 13:57:03] -rw-r--r-- 1 boincer umatlas     21983 Jul 27 13:57 stderr.txt
[2025-07-27 13:57:03] HITS file was successfully produced:
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas 178074040 Jul 27 13:55 shared/HITS.pool.root.1
[2025-07-27 13:57:03]  *** Contents of shared directory: ***
[2025-07-27 13:57:03] total 415416
[2025-07-27 13:57:03] -rw-r--r-- 2 boincer umatlas 245880117 Jul 27 12:31 ATLAS.root_0
[2025-07-27 13:57:03] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:31 start_atlas.sh
[2025-07-27 13:57:03] -rw-r--r-- 2 boincer umatlas    542877 Jul 27 12:31 input.tar.gz
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas 178074040 Jul 27 13:55 HITS.pool.root.1
[2025-07-27 13:57:03] -rw------- 1 boincer umatlas    860160 Jul 27 13:57 result.tar.gz
13:57:04 (24147): run_atlas exited; CPU time 54920.003927
13:57:04 (24147): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN