Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:41:32 (10195): wrapper (7.7.26015): starting
12:41:32 (10195): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 12:41:32] Arguments: --nthreads 8
[2025-07-27 12:41:32] Threads: 8
[2025-07-27 12:41:32] Checking for CVMFS
[2025-07-27 12:41:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:41:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:41:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:41:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:41:32] 2.11.2.0 21479 145531 482036 148818 0 59 10243894 18432000 3665 130560 0 287770011 99.003 643027295 41003 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 12:41:32] CVMFS is ok
[2025-07-27 12:41:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:41:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:41:32] Further information can be found at the LHC@home message board.
[2025-07-27 12:41:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:41:32] Checking for apptainer binary...
[2025-07-27 12:41:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:41:32] Running /usr/bin/apptainer --version
[2025-07-27 12:41:33] apptainer version 1.3.2-1.el7
[2025-07-27 12:41:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:41:33] c-211-24.aglt2.org
[2025-07-27 12:41:33] apptainer works
[2025-07-27 12:41:33] Set ATHENA_PROC_NUMBER=8
[2025-07-27 12:41:33] Set ATHENA_CORE_NUMBER=8
[2025-07-27 12:41:33] Starting ATLAS job with PandaID=6747376033
[2025-07-27 12:41:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:02:10]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:02:10] 2025-07-27 20:01:34,282 | INFO     | monitor loop #858: job 0:6747376033 is in state 'finished'
[2025-07-27 16:02:10] 2025-07-27 20:01:34,282 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:02:10] 2025-07-27 20:01:36,787 | INFO     | monitor loop #859: job 0:6747376033 is in state 'finished'
[2025-07-27 16:02:10] 2025-07-27 20:01:36,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:02:10] 2025-07-27 20:01:37,344 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 16:02:10] 2025-07-27 20:01:37,353 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.924400000001
[2025-07-27 16:02:10] 2025-07-27 20:01:37,361 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747376033/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:02:10] 2025-07-27 20:01:37,362 | INFO     | extracted standard info from prmon json
[2025-07-27 16:02:10] 2025-07-27 20:01:37,362 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:02:10] 2025-07-27 20:01:37,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:02:10] 2025-07-27 20:01:37,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:02:10] 2025-07-27 20:01:37,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:02:10] 2025-07-27 20:01:37,366 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:02:10] 2025-07-27 20:01:37,366 | INFO     | sum of square deviations: 2334722845.0
[2025-07-27 16:02:10] 2025-07-27 20:01:37,367 | INFO     | sum of deviations: 63598051.00000238
[2025-07-27 16:02:10] 2025-07-27 20:01:37,368 | INFO     | mean x: 1753640478.5
[2025-07-27 16:02:10] 2025-07-27 20:01:37,368 | INFO     | mean y: 2501890.4285714286
[2025-07-27 16:02:10] 2025-07-27 20:01:37,368 | INFO     | -- intersect: -45267426.95578457
[2025-07-27 16:02:10] 2025-07-27 20:01:37,368 | INFO     | intersect: -45267426.95578457
[2025-07-27 16:02:10] 2025-07-27 20:01:37,368 | INFO     | chi2: 1.5048463245983739
[2025-07-27 16:02:10] 2025-07-27 20:01:37,368 | INFO     | sum of square deviations: 2160561440.0
[2025-07-27 16:02:10] 2025-07-27 20:01:37,369 | INFO     | sum of deviations: -176690525.99999973
[2025-07-27 16:02:10] 2025-07-27 20:01:37,369 | INFO     | mean x: 1753640326.0
[2025-07-27 16:02:10] 2025-07-27 20:01:37,369 | INFO     | mean y: 2501679.9685863876
[2025-07-27 16:02:10] 2025-07-27 20:01:37,370 | INFO     | -- intersect: 145914232.77974412
[2025-07-27 16:02:10] 2025-07-27 20:01:37,370 | INFO     | intersect: 145914232.77974412
[2025-07-27 16:02:10] 2025-07-27 20:01:37,370 | INFO     | chi2: 1.5043073712230126
[2025-07-27 16:02:10] 2025-07-27 20:01:37,370 | INFO     | current chi2=1.5043073712230126 (change=0.03581451252207372 %)
[2025-07-27 16:02:10] 2025-07-27 20:01:37,370 | INFO     | right removable region: 190
[2025-07-27 16:02:10] 2025-07-27 20:01:37,370 | INFO     | sum of square deviations: 2160561440.0
[2025-07-27 16:02:10] 2025-07-27 20:01:37,371 | INFO     | sum of deviations: -27684113425.000004
[2025-07-27 16:02:10] 2025-07-27 20:01:37,371 | INFO     | mean x: 1753640631.0
[2025-07-27 16:02:10] 2025-07-27 20:01:37,371 | INFO     | mean y: 2525891.8167539267
[2025-07-27 16:02:10] 2025-07-27 20:01:37,372 | INFO     | -- intersect: 22472604842.819683
[2025-07-27 16:02:10] 2025-07-27 20:01:37,372 | INFO     | intersect: 22472604842.819683
[2025-07-27 16:02:10] 2025-07-27 20:01:37,372 | INFO     | chi2: 0.15109513195806454
[2025-07-27 16:02:10] 2025-07-27 20:01:37,372 | INFO     | current chi2=0.15109513195806454 (change=89.95943110680156 %)
[2025-07-27 16:02:10] 2025-07-27 20:01:37,372 | INFO     | sum of square deviations: 1995283922.5
[2025-07-27 16:02:10] 2025-07-27 20:01:37,373 | INFO     | sum of deviations: -25070380667.000023
[2025-07-27 16:02:10] 2025-07-27 20:01:37,373 | INFO     | mean x: 1753640783.5
[2025-07-27 16:02:10] 2025-07-27 20:01:37,373 | INFO     | mean y: 2523442.3333333335
[2025-07-27 16:02:10] 2025-07-27 20:01:37,373 | INFO     | -- intersect: 22036701886.69013
[2025-07-27 16:02:10] 2025-07-27 20:01:37,373 | INFO     | intersect: 22036701886.69013
[2025-07-27 16:02:10] 2025-07-27 20:01:37,374 | INFO     | chi2: 0.14075271178064083
[2025-07-27 16:02:10] 2025-07-27 20:01:37,374 | INFO     | current chi2=0.14075271178064083 (change=6.844972464297642 %)
[2025-07-27 16:02:10] 2025-07-27 20:01:37,374 | INFO     | left removable region: 20
[2025-07-27 16:02:10] 2025-07-27 20:01:37,374 | INFO     | sum of square deviations: 1523386702.5
[2025-07-27 16:02:10] 2025-07-27 20:01:37,375 | INFO     | sum of deviations: -13476237974.0
[2025-07-27 16:02:10] 2025-07-27 20:01:37,375 | INFO     | mean x: 1753640905.5
[2025-07-27 16:02:10] 2025-07-27 20:01:37,375 | INFO     | mean y: 2511937.2588235294
[2025-07-27 16:02:10] 2025-07-27 20:01:37,375 | INFO     | -- intersect: 15515632883.29048
[2025-07-27 16:02:10] 2025-07-27 20:01:37,375 | INFO     | intersect: 15515632883.29048
[2025-07-27 16:02:10] 2025-07-27 20:01:37,375 | INFO     | chi2: 0.10529298306869252
[2025-07-27 16:02:10] 2025-07-27 20:01:37,376 | INFO     | -- intersect: 15515632883.29048
[2025-07-27 16:02:10] 2025-07-27 20:01:37,376 | INFO     | current memory leak: -8.85 B/s (using 170 data points, chi2=0.11)
[2025-07-27 16:02:10] 2025-07-27 20:01:37,376 | INFO     | could have reported an average CPU frequency of 2899 MHz (10 samples)
[2025-07-27 16:02:10] 2025-07-27 20:01:37,376 | INFO     | ..............................
[2025-07-27 16:02:10] 2025-07-27 20:01:37,376 | INFO     | . Timing measurements:
[2025-07-27 16:02:10] 2025-07-27 20:01:37,376 | INFO     | . get job = 0 s
[2025-07-27 16:02:10] 2025-07-27 20:01:37,376 | INFO     | . initial setup = 2 s
[2025-07-27 16:02:10] 2025-07-27 20:01:37,376 | INFO     | . payload setup = 6 s
[2025-07-27 16:02:10] 2025-07-27 20:01:37,377 | INFO     | . stage-in = 0 s
[2025-07-27 16:02:10] 2025-07-27 20:01:37,377 | INFO     | . payload execution = 11957 s
[2025-07-27 16:02:10] 2025-07-27 20:01:37,377 | INFO     | . stage-out = 2 s
[2025-07-27 16:02:10] 2025-07-27 20:01:37,377 | INFO     | . log creation = 0 s
[2025-07-27 16:02:10] 2025-07-27 20:01:37,377 | INFO     | ..............................
[2025-07-27 16:02:10] 2025-07-27 20:01:37,496 | INFO     | 
[2025-07-27 16:02:10] 2025-07-27 20:01:37,496 | INFO     | job summary report
[2025-07-27 16:02:10] 2025-07-27 20:01:37,496 | INFO     | --------------------------------------------------
[2025-07-27 16:02:10] 2025-07-27 20:01:37,496 | INFO     | PanDA job id: 6747376033
[2025-07-27 16:02:10] 2025-07-27 20:01:37,496 | INFO     | task id: 45743349
[2025-07-27 16:02:10] 2025-07-27 20:01:37,497 | INFO     | errors: (none)
[2025-07-27 16:02:10] 2025-07-27 20:01:37,497 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:02:10] 2025-07-27 20:01:37,497 | INFO     | pilot state: finished 
[2025-07-27 16:02:10] 2025-07-27 20:01:37,497 | INFO     | transexitcode: 0
[2025-07-27 16:02:10] 2025-07-27 20:01:37,497 | INFO     | exeerrorcode: 0
[2025-07-27 16:02:10] 2025-07-27 20:01:37,497 | INFO     | exeerrordiag: 
[2025-07-27 16:02:10] 2025-07-27 20:01:37,498 | INFO     | exitcode: 0
[2025-07-27 16:02:10] 2025-07-27 20:01:37,498 | INFO     | exitmsg: OK
[2025-07-27 16:02:10] 2025-07-27 20:01:37,498 | INFO     | cpuconsumptiontime: 88849 s
[2025-07-27 16:02:10] 2025-07-27 20:01:37,498 | INFO     | nevents: 400
[2025-07-27 16:02:10] 2025-07-27 20:01:37,498 | INFO     | neventsw: 0
[2025-07-27 16:02:10] 2025-07-27 20:01:37,498 | INFO     | pid: 20326
[2025-07-27 16:02:10] 2025-07-27 20:01:37,499 | INFO     | pgrp: 20326
[2025-07-27 16:02:10] 2025-07-27 20:01:37,499 | INFO     | corecount: 8
[2025-07-27 16:02:10] 2025-07-27 20:01:37,499 | INFO     | event service: False
[2025-07-27 16:02:10] 2025-07-27 20:01:37,499 | INFO     | sizes: {0: 2397475, 4: 2397737, 11: 2397765, 11967: 2427108, 11971: 2436190, 11978: 2436328}
[2025-07-27 16:02:10] 2025-07-27 20:01:37,499 | INFO     | --------------------------------------------------
[2025-07-27 16:02:10] 2025-07-27 20:01:37,499 | INFO     | 
[2025-07-27 16:02:10] 2025-07-27 20:01:37,500 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 16:02:10] 2025-07-27 20:01:37,519 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,520 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,520 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,520 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,520 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,520 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,520 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,521 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,521 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,521 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,521 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:02:10] 2025-07-27 20:01:37,521 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,521 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:02:10] 2025-07-27 20:01:37,522 | INFO     | job 6747376033 has completed (purged errors)
[2025-07-27 16:02:10] 2025-07-27 20:01:37,522 | INFO     | overall cleanup function is called
[2025-07-27 16:02:10] 2025-07-27 20:01:38,529 | INFO     | --- collectZombieJob: --- 10, [20326]
[2025-07-27 16:02:10] 2025-07-27 20:01:38,529 | INFO     | zombie collector waiting for pid 20326
[2025-07-27 16:02:10] 2025-07-27 20:01:38,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:02:10] 2025-07-27 20:01:38,530 | INFO     | collected zombie processes
[2025-07-27 16:02:10] 2025-07-27 20:01:38,530 | INFO     | will attempt to kill all subprocesses of pid=20326
[2025-07-27 16:02:10] 2025-07-27 20:01:38,772 | INFO     | process IDs to be killed: [20326] (in reverse order)
[2025-07-27 16:02:10] 2025-07-27 20:01:38,848 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:02:10] 2025-07-27 20:01:38,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:02:10] 2025-07-27 20:01:38,852 | INFO     | did not find any defunct processes belonging to 20326
[2025-07-27 16:02:10] 2025-07-27 20:01:38,855 | INFO     | did not find any defunct processes belonging to 20326
[2025-07-27 16:02:10] 2025-07-27 20:01:38,856 | INFO     | ready for new job
[2025-07-27 16:02:10] 2025-07-27 20:01:38,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:02:10] 2025-07-27 20:01:38,857 | INFO     | ***************************************
[2025-07-27 16:02:10] 2025-07-27 20:01:38,857 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:02:10] 2025-07-27 20:01:38,857 | INFO     | ***************************************
[2025-07-27 16:02:10] 2025-07-27 20:01:38,857 | INFO     | 
[2025-07-27 16:02:10] 2025-07-27 20:01:38,859 | INFO     | architecture information:
[2025-07-27 16:02:10] 2025-07-27 20:01:38,859 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:02:10] 2025-07-27 20:01:38,869 | INFO     | cat /etc/os-release:
[2025-07-27 16:02:10] NAME="CentOS Linux"
[2025-07-27 16:02:10] VERSION="7 (Core)"
[2025-07-27 16:02:10] ID="centos"
[2025-07-27 16:02:10] ID_LIKE="rhel fedora"
[2025-07-27 16:02:10] VERSION_ID="7"
[2025-07-27 16:02:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:02:10] ANSI_COLOR="0;31"
[2025-07-27 16:02:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:02:10] HOME_URL="https://www.centos.org/"
[2025-07-27 16:02:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:02:10] 
[2025-07-27 16:02:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:02:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:02:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:02:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:02:10] 
[2025-07-27 16:02:10] 2025-07-27 20:01:38,869 | INFO     | ***************************************
[2025-07-27 16:02:10] 2025-07-27 20:01:39,371 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 16:02:10] 2025-07-27 20:01:39,388 | INFO     | sufficient remaining disk space (55922655232 B)
[2025-07-27 16:02:10] 2025-07-27 20:01:39,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:02:10] 2025-07-27 20:01:39,389 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:02:10] 2025-07-27 20:01:39,389 | INFO     | update_server=False
[2025-07-27 16:02:10] 2025-07-27 20:01:39,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:02:10] 2025-07-27 20:01:39,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:02:10] 2025-07-27 20:01:39,924 | INFO     | all data control threads have been joined
[2025-07-27 16:02:10] 2025-07-27 20:01:40,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:02:10] 2025-07-27 20:01:40,296 | INFO     | aborting loop
[2025-07-27 16:02:10] 2025-07-27 20:01:40,382 | INFO     | all payload control threads have been joined
[2025-07-27 16:02:10] 2025-07-27 20:01:40,395 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:40,396 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:40,509 | INFO     | all job control threads have been joined
[2025-07-27 16:02:10] 2025-07-27 20:01:40,668 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:40,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:02:10] 2025-07-27 20:01:40,883 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:40,930 | INFO     | [data] control thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:40,952 | INFO     | [job] validate thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:41,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:02:10] 2025-07-27 20:01:41,170 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:41,302 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:41,387 | INFO     | [payload] control thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:41,422 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:41,515 | INFO     | [job] control thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:41,524 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:41,640 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:41,985 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:42,864 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:45,012 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:02:10] 2025-07-27 20:01:46,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139922656053056)>', '<ExcThread(monitor, started 139922199516928)>']
[2025-07-27 16:02:10] 2025-07-27 20:01:51,731 | INFO     | all workflow threads have been joined
[2025-07-27 16:02:10] 2025-07-27 20:01:51,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:02:10] 2025-07-27 20:01:51,732 | INFO     | traces error code: 0
[2025-07-27 16:02:10] 2025-07-27 20:01:51,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:02:10] 2025-07-27 20:02:10,559 | INFO     | PID=13829 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 16:02:10] 2025-07-27 20:02:10,560 | INFO     | .. there are 5 such processes running
[2025-07-27 16:02:10] 2025-07-27 20:02:10,561 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:02:10] 2025-07-27 20:02:10,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:02:10] 2025-07-27 20:02:10,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:02:10] 2025-07-27 20:02:10,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:02:10] 2025-07-27 20:02:10,562 | INFO     | [monitor] control thread has ended
[2025-07-27 16:02:10] 2025-07-27 20:02:10,655 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:02:10] 2025-07-27 20:02:10,657 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:02:10] 2025-07-27 20:02:10,660 [wrapper] pilotpid: 13829
[2025-07-27 16:02:10] 2025-07-27 20:02:10,663 [wrapper] Pilot exit status: 0
[2025-07-27 16:02:10] 2025-07-27 20:02:10,675 [wrapper] pandaids: 6747376033
[2025-07-27 16:02:10] 2025-07-27 20:02:10,722 [wrapper] cleanup supervisor_pilot 23136 13830
[2025-07-27 16:02:10] 2025-07-27 20:02:10,724 [wrapper] Test setup, not cleaning
[2025-07-27 16:02:10] 2025-07-27 20:02:10,730 [wrapper] apfmon messages muted
[2025-07-27 16:02:10] 2025-07-27 20:02:10,732 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:02:10] 2025-07-27 20:02:10,734 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:02:10]  *** Error codes and diagnostics ***
[2025-07-27 16:02:10]     "exeErrorCode": 0,
[2025-07-27 16:02:10]     "exeErrorDiag": "",
[2025-07-27 16:02:10]     "pilotErrorCode": 0,
[2025-07-27 16:02:10]     "pilotErrorDiag": "",
[2025-07-27 16:02:10]  *** Listing of results directory ***
[2025-07-27 16:02:10] total 353588
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 06:53 pilot3.tar.gz
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 06:59 queuedata.json
[2025-07-27 16:02:10] -rwx------ 1 boincer umatlas     36292 Jul 27 06:59 runpilot2-wrapper.sh
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas       100 Jul 27 12:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:02:10] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 12:41 run_atlas
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas       105 Jul 27 12:41 job.xml
[2025-07-27 16:02:10] -rw-r--r-- 2 boincer umatlas 146610436 Jul 27 12:41 EVNT.45743347._002626.pool.root.1
[2025-07-27 16:02:10] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:41 start_atlas.sh
[2025-07-27 16:02:10] drwxrwx--x 2 boincer umatlas      4096 Jul 27 12:41 shared
[2025-07-27 16:02:10] -rw-r--r-- 2 boincer umatlas    542897 Jul 27 12:41 input.tar.gz
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas         0 Jul 27 12:41 boinc_lockfile
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 12:41 pandaJob.out
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas    980125 Jul 27 12:41 agis_schedconf.cvmfs.json
[2025-07-27 16:02:10] drwx------ 4 boincer umatlas      4096 Jul 27 12:41 pilot3
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas      6035 Jul 27 16:00 init_data.xml
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas 208676631 Jul 27 16:00 HITS.45743349._047268.pool.root.1
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas       531 Jul 27 16:01 boinc_task_state.xml
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas      1062 Jul 27 16:01 memory_monitor_summary.json
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas   1593052 Jul 27 16:01 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas    368741 Jul 27 16:01 log.45743349._047268.job.log.tgz.1
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas      7840 Jul 27 16:01 heartbeat.json
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 16:01 boinc_mmap_file
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas        28 Jul 27 16:01 wrapper_checkpoint.txt
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas        95 Jul 27 16:02 pilot_heartbeat.json
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas       820 Jul 27 16:02 pilotlog.txt
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas   1087425 Jul 27 16:02 log.45743349._047268.job.log.1
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas       357 Jul 27 16:02 output.list
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas       620 Jul 27 16:02 runtime_log
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas   1474560 Jul 27 16:02 result.tar.gz
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas      8661 Jul 27 16:02 runtime_log.err
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas       662 Jul 27 16:02 L5nKDmFHE07n9Rq4apOajLDm4fhM0noT9bVof3QYDmuR2KDmt5UrDo.diag
[2025-07-27 16:02:10] -rw-r--r-- 1 boincer umatlas     21141 Jul 27 16:02 stderr.txt
[2025-07-27 16:02:10] HITS file was successfully produced:
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas 208676631 Jul 27 16:00 shared/HITS.pool.root.1
[2025-07-27 16:02:10]  *** Contents of shared directory: ***
[2025-07-27 16:02:10] total 348956
[2025-07-27 16:02:10] -rw-r--r-- 2 boincer umatlas 146610436 Jul 27 12:41 ATLAS.root_0
[2025-07-27 16:02:10] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:41 start_atlas.sh
[2025-07-27 16:02:10] -rw-r--r-- 2 boincer umatlas    542897 Jul 27 12:41 input.tar.gz
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas 208676631 Jul 27 16:00 HITS.pool.root.1
[2025-07-27 16:02:10] -rw------- 1 boincer umatlas   1474560 Jul 27 16:02 result.tar.gz
16:02:11 (10195): run_atlas exited; CPU time 89134.583816
16:02:11 (10195): called boinc_finish(0)

</stderr_txt>
]]>

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