Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:11:59 (3594785): wrapper (7.7.26015): starting
00:11:59 (3594785): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 00:11:59] Arguments: --nthreads 12
[2025-07-28 00:11:59] Threads: 12
[2025-07-28 00:11:59] Checking for CVMFS
[2025-07-28 00:11:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 00:11:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 00:11:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 00:11:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 00:11:59] 2.13.1.0 659355 8710 108996 148826 2 57 2478253 4097024 0 130560 0 7334842 99.991 314450 8164 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-28 00:11:59] CVMFS is ok
[2025-07-28 00:11:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 00:11:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 00:11:59] Further information can be found at the LHC@home message board.
[2025-07-28 00:11:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 00:11:59] Checking for apptainer binary...
[2025-07-28 00:11:59] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-28 00:11:59] apptainer is not installed, using version from CVMFS
[2025-07-28 00:11:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 00:11:59] pckelar8.cern.ch
[2025-07-28 00:11:59] apptainer works
[2025-07-28 00:11:59] Set ATHENA_PROC_NUMBER=12
[2025-07-28 00:11:59] Set ATHENA_CORE_NUMBER=12
[2025-07-28 00:11:59] Starting ATLAS job with PandaID=6747376272
[2025-07-28 00:11:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:23:51]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:23:51]  is_altstaged=None
[2025-07-28 01:23:51]  is_tar=False
[2025-07-28 01:23:51]  lfn=log.45743349._047507.job.log.tgz.1
[2025-07-28 01:23:51]  mtime=0
[2025-07-28 01:23:51]  protocol_id=None
[2025-07-28 01:23:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 01:23:51]  replicas=None
[2025-07-28 01:23:51]  scope=mc23_13p6TeV
[2025-07-28 01:23:51]  status=None
[2025-07-28 01:23:51]  status_code=0
[2025-07-28 01:23:51]  storage_token=
[2025-07-28 01:23:51]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6747376272/log.45743349._047507.job.log.tgz.1
[2025-07-28 01:23:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/ab/log.45743349._047507.job.log.tgz.1
[2025-07-28 01:23:51]  workdir=None
[2025-07-28 01:23:51] ]
[2025-07-28 01:23:51] 2025-07-27 23:23:09,201 | INFO     | transferring file log.45743349._047507.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6747376272/log.45743349._047507.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 01:23:51] 2025-07-27 23:23:09,201 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6747376272/log.45743349._047507.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._047507.job
[2025-07-28 01:23:51] 2025-07-27 23:23:09,217 | INFO     | adding to output.list: log.45743349._047507.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/ab/log.45743349._047507.job.log.tg
[2025-07-28 01:23:51] 2025-07-27 23:23:09,218 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 01:23:51] 2025-07-27 23:23:09,218 | INFO     | summary of transferred files:
[2025-07-28 01:23:51] 2025-07-27 23:23:09,218 | INFO     |  -- lfn=log.45743349._047507.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 01:23:51] 2025-07-27 23:23:09,218 | INFO     | stage-out finished correctly
[2025-07-28 01:23:51] 2025-07-27 23:23:12,422 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 01:23:51] 2025-07-27 23:23:14,378 | WARNING  | process 3605574 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 01:23:51] 2025-07-27 23:23:14,379 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6747376272/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:23:51] 2025-07-27 23:23:14,443 | INFO     | number of running child processes to parent process 3605574: 1
[2025-07-28 01:23:51] 2025-07-27 23:23:14,443 | INFO     | maximum number of monitored processes: 6
[2025-07-28 01:23:51] 2025-07-27 23:23:14,544 | INFO     | job 6747376272 has state=finished
[2025-07-28 01:23:51] 2025-07-27 23:23:14,544 | INFO     | preparing for final server update for job 6747376272 in state='finished'
[2025-07-28 01:23:51] 2025-07-27 23:23:14,545 | INFO     | this job has now completed (state=finished)
[2025-07-28 01:23:51] 2025-07-27 23:23:14,545 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 01:23:51] 2025-07-27 23:23:14,545 | INFO     | log transfer has been attempted: DONE
[2025-07-28 01:23:51] 2025-07-27 23:23:14,545 | INFO     | job 6747376272 has finished - writing final server update
[2025-07-28 01:23:51] 2025-07-27 23:23:14,545 | INFO     | total number of processed events: 400 (read)
[2025-07-28 01:23:51] 2025-07-27 23:23:14,547 | INFO     | executing command: lscpu
[2025-07-28 01:23:51] 2025-07-27 23:23:14,565 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 01:23:51] 2025-07-27 23:23:16,946 | INFO     | monitor loop #325: job 0:6747376272 is in state 'finished'
[2025-07-28 01:23:51] 2025-07-27 23:23:16,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:23:51] 2025-07-27 23:23:18,610 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 01:23:51] 2025-07-27 23:23:18,612 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2608.7135
[2025-07-28 01:23:51] 2025-07-27 23:23:18,614 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6747376272/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:23:51] 2025-07-27 23:23:18,614 | INFO     | extracted standard info from prmon json
[2025-07-28 01:23:51] 2025-07-27 23:23:18,615 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:23:51] 2025-07-27 23:23:18,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:23:51] 2025-07-27 23:23:18,615 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:23:51] 2025-07-27 23:23:18,615 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:23:51] 2025-07-27 23:23:18,616 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:23:51] 2025-07-27 23:23:18,617 | INFO     | sum of square deviations: 77515872.0
[2025-07-28 01:23:51] 2025-07-27 23:23:18,617 | INFO     | sum of deviations: -559786508.0
[2025-07-28 01:23:51] 2025-07-27 23:23:18,617 | INFO     | mean x: 1753656545.0
[2025-07-28 01:23:51] 2025-07-27 23:23:18,617 | INFO     | mean y: 2869878.285714286
[2025-07-28 01:23:51] 2025-07-27 23:23:18,617 | INFO     | -- intersect: 12667028175.5296
[2025-07-28 01:23:51] 2025-07-27 23:23:18,617 | INFO     | intersect: 12667028175.5296
[2025-07-28 01:23:51] 2025-07-27 23:23:18,617 | INFO     | chi2: 0.015074281884343598
[2025-07-28 01:23:51] 2025-07-27 23:23:18,618 | INFO     | -- intersect: 12667028175.5296
[2025-07-28 01:23:51] 2025-07-27 23:23:18,618 | INFO     | current memory leak: -7.22 B/s (using 63 data points, chi2=0.02)
[2025-07-28 01:23:51] 2025-07-27 23:23:18,618 | INFO     | could have reported an average CPU frequency of 2622 MHz (6 samples)
[2025-07-28 01:23:51] 2025-07-27 23:23:18,618 | INFO     | ..............................
[2025-07-28 01:23:51] 2025-07-27 23:23:18,618 | INFO     | . Timing measurements:
[2025-07-28 01:23:51] 2025-07-27 23:23:18,618 | INFO     | . get job = 0 s
[2025-07-28 01:23:51] 2025-07-27 23:23:18,618 | INFO     | . initial setup = 1 s
[2025-07-28 01:23:51] 2025-07-27 23:23:18,618 | INFO     | . payload setup = 5 s
[2025-07-28 01:23:51] 2025-07-27 23:23:18,619 | INFO     | . stage-in = 0 s
[2025-07-28 01:23:51] 2025-07-27 23:23:18,619 | INFO     | . payload execution = 4238 s
[2025-07-28 01:23:51] 2025-07-27 23:23:18,619 | INFO     | . stage-out = 0 s
[2025-07-28 01:23:51] 2025-07-27 23:23:18,619 | INFO     | . log creation = 0 s
[2025-07-28 01:23:51] 2025-07-27 23:23:18,619 | INFO     | ..............................
[2025-07-28 01:23:51] 2025-07-27 23:23:18,689 | INFO     | 
[2025-07-28 01:23:51] 2025-07-27 23:23:18,689 | INFO     | job summary report
[2025-07-28 01:23:51] 2025-07-27 23:23:18,689 | INFO     | --------------------------------------------------
[2025-07-28 01:23:51] 2025-07-27 23:23:18,690 | INFO     | PanDA job id: 6747376272
[2025-07-28 01:23:51] 2025-07-27 23:23:18,690 | INFO     | task id: 45743349
[2025-07-28 01:23:51] 2025-07-27 23:23:18,690 | INFO     | errors: (none)
[2025-07-28 01:23:51] 2025-07-27 23:23:18,690 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:23:51] 2025-07-27 23:23:18,690 | INFO     | pilot state: finished 
[2025-07-28 01:23:51] 2025-07-27 23:23:18,690 | INFO     | transexitcode: 0
[2025-07-28 01:23:51] 2025-07-27 23:23:18,690 | INFO     | exeerrorcode: 0
[2025-07-28 01:23:51] 2025-07-27 23:23:18,690 | INFO     | exeerrordiag: 
[2025-07-28 01:23:51] 2025-07-27 23:23:18,690 | INFO     | exitcode: 0
[2025-07-28 01:23:51] 2025-07-27 23:23:18,690 | INFO     | exitmsg: OK
[2025-07-28 01:23:51] 2025-07-27 23:23:18,691 | INFO     | cpuconsumptiontime: 46946 s
[2025-07-28 01:23:51] 2025-07-27 23:23:18,691 | INFO     | nevents: 400
[2025-07-28 01:23:51] 2025-07-27 23:23:18,691 | INFO     | neventsw: 0
[2025-07-28 01:23:51] 2025-07-27 23:23:18,691 | INFO     | pid: 3605574
[2025-07-28 01:23:51] 2025-07-27 23:23:18,691 | INFO     | pgrp: 3605574
[2025-07-28 01:23:51] 2025-07-27 23:23:18,691 | INFO     | corecount: 12
[2025-07-28 01:23:51] 2025-07-27 23:23:18,691 | INFO     | event service: False
[2025-07-28 01:23:51] 2025-07-27 23:23:18,691 | INFO     | sizes: {0: 2397253, 1: 2397452, 4: 2397714, 11: 2397742, 4248: 2423870, 4249: 2432868, 4252: 2433052, 4258: 2433246}
[2025-07-28 01:23:51] 2025-07-27 23:23:18,691 | INFO     | --------------------------------------------------
[2025-07-28 01:23:51] 2025-07-27 23:23:18,691 | INFO     | 
[2025-07-28 01:23:51] 2025-07-27 23:23:18,691 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 01:23:51] 2025-07-27 23:23:18,711 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,711 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,711 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,711 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,712 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,712 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,712 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,713 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,713 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,713 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:23:51] 2025-07-27 23:23:18,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,713 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:23:51] 2025-07-27 23:23:18,713 | INFO     | job 6747376272 has completed (purged errors)
[2025-07-28 01:23:51] 2025-07-27 23:23:18,713 | INFO     | overall cleanup function is called
[2025-07-28 01:23:51] 2025-07-27 23:23:19,721 | INFO     | --- collectZombieJob: --- 10, [3605574]
[2025-07-28 01:23:51] 2025-07-27 23:23:19,721 | INFO     | zombie collector waiting for pid 3605574
[2025-07-28 01:23:51] 2025-07-27 23:23:19,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:23:51] 2025-07-27 23:23:19,722 | INFO     | collected zombie processes
[2025-07-28 01:23:51] 2025-07-27 23:23:19,723 | INFO     | will attempt to kill all subprocesses of pid=3605574
[2025-07-28 01:23:51] 2025-07-27 23:23:19,791 | INFO     | process IDs to be killed: [3605574] (in reverse order)
[2025-07-28 01:23:51] 2025-07-27 23:23:19,822 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:23:51] 2025-07-27 23:23:19,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:23:51] 2025-07-27 23:23:19,824 | INFO     | did not find any defunct processes belonging to 3605574
[2025-07-28 01:23:51] 2025-07-27 23:23:19,826 | INFO     | did not find any defunct processes belonging to 3605574
[2025-07-28 01:23:51] 2025-07-27 23:23:19,826 | INFO     | ready for new job
[2025-07-28 01:23:51] 2025-07-27 23:23:19,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:23:51] 2025-07-27 23:23:19,828 | INFO     | ***************************************
[2025-07-28 01:23:51] 2025-07-27 23:23:19,828 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:23:51] 2025-07-27 23:23:19,828 | INFO     | ***************************************
[2025-07-28 01:23:51] 2025-07-27 23:23:19,828 | INFO     | 
[2025-07-28 01:23:51] 2025-07-27 23:23:19,828 | INFO     | architecture information:
[2025-07-28 01:23:51] 2025-07-27 23:23:19,829 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:23:51] 2025-07-27 23:23:19,840 | INFO     | cat /etc/os-release:
[2025-07-28 01:23:51] NAME="CentOS Linux"
[2025-07-28 01:23:51] VERSION="7 (Core)"
[2025-07-28 01:23:51] ID="centos"
[2025-07-28 01:23:51] ID_LIKE="rhel fedora"
[2025-07-28 01:23:51] VERSION_ID="7"
[2025-07-28 01:23:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:23:51] ANSI_COLOR="0;31"
[2025-07-28 01:23:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:23:51] HOME_URL="https://www.centos.org/"
[2025-07-28 01:23:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:23:51] 
[2025-07-28 01:23:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:23:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:23:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:23:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:23:51] 
[2025-07-28 01:23:51] 2025-07-27 23:23:19,840 | INFO     | ***************************************
[2025-07-28 01:23:51] 2025-07-27 23:23:20,343 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 01:23:51] 2025-07-27 23:23:20,356 | INFO     | sufficient remaining disk space (1717851652096 B)
[2025-07-28 01:23:51] 2025-07-27 23:23:20,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:23:51] 2025-07-27 23:23:20,357 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:23:51] 2025-07-27 23:23:20,357 | INFO     | update_server=False
[2025-07-28 01:23:51] 2025-07-27 23:23:20,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:23:51] 2025-07-27 23:23:20,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:23:51] 2025-07-27 23:23:20,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:23:51] 2025-07-27 23:23:20,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:23:51] 2025-07-27 23:23:20,454 | INFO     | aborting loop
[2025-07-28 01:23:51] 2025-07-27 23:23:20,471 | INFO     | all data control threads have been joined
[2025-07-28 01:23:51] 2025-07-27 23:23:20,816 | INFO     | all job control threads have been joined
[2025-07-28 01:23:51] 2025-07-27 23:23:21,301 | INFO     | all payload control threads have been joined
[2025-07-28 01:23:51] 2025-07-27 23:23:21,362 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:21,362 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:21,385 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:21,392 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:21,460 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:21,476 | INFO     | [data] control thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:21,632 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:21,800 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:21,822 | INFO     | [job] control thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:21,924 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:22,306 | INFO     | [payload] control thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:22,363 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:22,455 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:22,554 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:22,665 | INFO     | [job] validate thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:22,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:23:51] 2025-07-27 23:23:27,000 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:23:51] 2025-07-27 23:23:27,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960969217856)>', '<ExcThread(monitor, started 139960292206336)>']
[2025-07-28 01:23:51] 2025-07-27 23:23:32,172 | INFO     | all workflow threads have been joined
[2025-07-28 01:23:51] 2025-07-27 23:23:32,172 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:23:51] 2025-07-27 23:23:32,173 | INFO     | traces error code: 0
[2025-07-28 01:23:51] 2025-07-27 23:23:32,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:23:51] 2025-07-27 23:23:51,349 | INFO     | PID=3598463 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:23:51] 2025-07-27 23:23:51,350 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:23:51] 2025-07-27 23:23:51,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:23:51] 2025-07-27 23:23:51,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:23:51] 2025-07-27 23:23:51,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:23:51] 2025-07-27 23:23:51,350 | INFO     | [monitor] control thread has ended
[2025-07-28 01:23:51] 2025-07-27 23:23:51,423 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:23:51] 2025-07-27 23:23:51,426 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:23:51] 2025-07-27 23:23:51,428 [wrapper] pilotpid: 3598463
[2025-07-28 01:23:51] 2025-07-27 23:23:51,431 [wrapper] Pilot exit status: 0
[2025-07-28 01:23:51] 2025-07-27 23:23:51,440 [wrapper] pandaids: 6747376272
[2025-07-28 01:23:51] 2025-07-27 23:23:51,459 [wrapper] cleanup supervisor_pilot 3617182 3598464
[2025-07-28 01:23:51] 2025-07-27 23:23:51,462 [wrapper] Test setup, not cleaning
[2025-07-28 01:23:51] 2025-07-27 23:23:51,464 [wrapper] apfmon messages muted
[2025-07-28 01:23:51] 2025-07-27 23:23:51,466 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:23:51] 2025-07-27 23:23:51,468 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:23:51]  *** Error codes and diagnostics ***
[2025-07-28 01:23:51]     "exeErrorCode": 0,
[2025-07-28 01:23:51]     "exeErrorDiag": "",
[2025-07-28 01:23:51]     "pilotErrorCode": 0,
[2025-07-28 01:23:51]     "pilotErrorDiag": "",
[2025-07-28 01:23:51]  *** Listing of results directory ***
[2025-07-28 01:23:51] total 425264
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc    550332 Jun 18 17:33 pilot3.tar.gz
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc      5112 Jul 27 13:02 queuedata.json
[2025-07-28 01:23:51] -rwx------ 1 boinc boinc     36292 Jul 27 13:03 runpilot2-wrapper.sh
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc       100 Jul 28 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:23:51] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 00:11 run_atlas
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc       105 Jul 28 00:11 job.xml
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc      6251 Jul 28 00:11 init_data.xml
[2025-07-28 01:23:51] -rw-r--r-- 2 boinc boinc 230843077 Jul 28 00:11 EVNT.45743347._002639.pool.root.1
[2025-07-28 01:23:51] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:11 start_atlas.sh
[2025-07-28 01:23:51] drwxrwx--x 2 boinc boinc      4096 Jul 28 00:11 shared
[2025-07-28 01:23:51] -rw-r--r-- 2 boinc boinc    564556 Jul 28 00:11 input.tar.gz
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc         0 Jul 28 00:11 boinc_lockfile
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc      2562 Jul 28 00:11 pandaJob.out
[2025-07-28 01:23:51] -rw------- 1 boinc boinc    980117 Jul 28 00:12 agis_schedconf.cvmfs.json
[2025-07-28 01:23:51] -rw------- 1 boinc boinc   1593052 Jul 28 00:12 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:23:51] drwx------ 6 boinc boinc      4096 Jul 28 00:12 pilot3
[2025-07-28 01:23:51] -rw------- 1 boinc boinc 199151223 Jul 28 01:22 HITS.45743349._047507.pool.root.1
[2025-07-28 01:23:51] -rw------- 1 boinc boinc      1017 Jul 28 01:23 memory_monitor_summary.json
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc       529 Jul 28 01:23 boinc_task_state.xml
[2025-07-28 01:23:51] -rw------- 1 boinc boinc    356109 Jul 28 01:23 log.45743349._047507.job.log.tgz.1
[2025-07-28 01:23:51] -rw------- 1 boinc boinc      7782 Jul 28 01:23 heartbeat.json
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc      8192 Jul 28 01:23 boinc_mmap_file
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc        27 Jul 28 01:23 wrapper_checkpoint.txt
[2025-07-28 01:23:51] -rw------- 1 boinc boinc        95 Jul 28 01:23 pilot_heartbeat.json
[2025-07-28 01:23:51] -rw------- 1 boinc boinc       747 Jul 28 01:23 pilotlog.txt
[2025-07-28 01:23:51] -rw------- 1 boinc boinc    423943 Jul 28 01:23 log.45743349._047507.job.log.1
[2025-07-28 01:23:51] -rw------- 1 boinc boinc       357 Jul 28 01:23 output.list
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc       620 Jul 28 01:23 runtime_log
[2025-07-28 01:23:51] -rw------- 1 boinc boinc    798720 Jul 28 01:23 result.tar.gz
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc      8684 Jul 28 01:23 runtime_log.err
[2025-07-28 01:23:51] -rw------- 1 boinc boinc       655 Jul 28 01:23 d8CNDm9KE07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT6ULDmrt9dQo.diag
[2025-07-28 01:23:51] -rw-r--r-- 1 boinc boinc     21634 Jul 28 01:23 stderr.txt
[2025-07-28 01:23:51] HITS file was successfully produced:
[2025-07-28 01:23:51] -rw------- 1 boinc boinc 199151223 Jul 28 01:22 shared/HITS.pool.root.1
[2025-07-28 01:23:51]  *** Contents of shared directory: ***
[2025-07-28 01:23:51] total 421276
[2025-07-28 01:23:51] -rw-r--r-- 2 boinc boinc 230843077 Jul 28 00:11 ATLAS.root_0
[2025-07-28 01:23:51] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:11 start_atlas.sh
[2025-07-28 01:23:51] -rw-r--r-- 2 boinc boinc    564556 Jul 28 00:11 input.tar.gz
[2025-07-28 01:23:51] -rw------- 1 boinc boinc 199151223 Jul 28 01:22 HITS.pool.root.1
[2025-07-28 01:23:51] -rw------- 1 boinc boinc    798720 Jul 28 01:23 result.tar.gz
01:23:52 (3594785): run_atlas exited; CPU time 46966.349003
01:23:52 (3594785): called boinc_finish(0)

</stderr_txt>
]]>

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