Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:29:33 (3501576): wrapper (7.7.26015): starting
12:29:33 (3501576): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 12:29:33] Arguments: --nthreads 8
[2025-07-27 12:29:33] Threads: 8
[2025-07-27 12:29:33] Checking for CVMFS
[2025-07-27 12:29:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:29:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:29:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:29:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:29:34] 2.13.1.0 3153527 8613 149760 148818 3 188 22423355 40960000 12841 16776704 0 117667079 99.999 308999 59400 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 12:29:34] CVMFS is ok
[2025-07-27 12:29:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:29:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:29:34] Further information can be found at the LHC@home message board.
[2025-07-27 12:29:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:29:34] Checking for apptainer binary...
[2025-07-27 12:29:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:29:34] Running /usr/bin/apptainer --version
[2025-07-27 12:29:34] apptainer version 1.4.1-1.el9
[2025-07-27 12:29:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:29:34] c-208-37.aglt2.org
[2025-07-27 12:29:34] apptainer works
[2025-07-27 12:29:34] Set ATHENA_PROC_NUMBER=8
[2025-07-27 12:29:34] Set ATHENA_CORE_NUMBER=8
[2025-07-27 12:29:34] Starting ATLAS job with PandaID=6746329844
[2025-07-27 12:29:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:32:03]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:32:03]  is_altstaged=None
[2025-07-27 13:32:03]  is_tar=False
[2025-07-27 13:32:03]  lfn=log.45758416._000076.job.log.tgz.1
[2025-07-27 13:32:03]  mtime=0
[2025-07-27 13:32:03]  protocol_id=None
[2025-07-27 13:32:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 13:32:03]  replicas=None
[2025-07-27 13:32:03]  scope=mc23_13p6TeV
[2025-07-27 13:32:03]  status=None
[2025-07-27 13:32:03]  status_code=0
[2025-07-27 13:32:03]  storage_token=
[2025-07-27 13:32:03]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6746329844/log.45758416._000076.job.log.tgz.1
[2025-07-27 13:32:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/24/log.45758416._000076.job.log.tgz.1
[2025-07-27 13:32:03]  workdir=None
[2025-07-27 13:32:03] ]
[2025-07-27 13:32:03] 2025-07-27 17:31:26,852 | INFO     | transferring file log.45758416._000076.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6746329844/log.45758416._000076.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 13:32:03] 2025-07-27 17:31:26,852 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6746329844/log.45758416._000076.job.log.tgz.1 /tmp/boinchome/slots/1/log.45758416._000076.job
[2025-07-27 13:32:03] 2025-07-27 17:31:26,870 | INFO     | adding to output.list: log.45758416._000076.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/24/log.45758416._000076.job.log.tg
[2025-07-27 13:32:03] 2025-07-27 17:31:26,871 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 13:32:03] 2025-07-27 17:31:26,871 | INFO     | summary of transferred files:
[2025-07-27 13:32:03] 2025-07-27 17:31:26,871 | INFO     |  -- lfn=log.45758416._000076.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 13:32:03] 2025-07-27 17:31:26,871 | INFO     | stage-out finished correctly
[2025-07-27 13:32:03] 2025-07-27 17:31:26,931 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 13:32:03] 2025-07-27 17:31:26,990 | INFO     | job 6746329844 has state=finished
[2025-07-27 13:32:03] 2025-07-27 17:31:26,990 | INFO     | preparing for final server update for job 6746329844 in state='finished'
[2025-07-27 13:32:03] 2025-07-27 17:31:26,991 | INFO     | this job has now completed (state=finished)
[2025-07-27 13:32:03] 2025-07-27 17:31:26,991 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 13:32:03] 2025-07-27 17:31:26,991 | INFO     | log transfer has been attempted: DONE
[2025-07-27 13:32:03] 2025-07-27 17:31:26,991 | INFO     | job 6746329844 has finished - writing final server update
[2025-07-27 13:32:03] 2025-07-27 17:31:26,991 | INFO     | total number of processed events: 400 (read)
[2025-07-27 13:32:03] 2025-07-27 17:31:26,992 | INFO     | executing command: lscpu
[2025-07-27 13:32:03] 2025-07-27 17:31:27,047 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 13:32:03] 2025-07-27 17:31:28,924 | WARNING  | process 3511804 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 13:32:03] 2025-07-27 17:31:28,924 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6746329844/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:32:03] 2025-07-27 17:31:29,276 | INFO     | number of running child processes to parent process 3511804: 1
[2025-07-27 13:32:03] 2025-07-27 17:31:29,277 | INFO     | maximum number of monitored processes: 6
[2025-07-27 13:32:03] 2025-07-27 17:31:30,765 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 13:32:03] 2025-07-27 17:31:30,769 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3782.6851171875005
[2025-07-27 13:32:03] 2025-07-27 17:31:30,783 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6746329844/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:32:03] 2025-07-27 17:31:30,783 | INFO     | extracted standard info from prmon json
[2025-07-27 13:32:03] 2025-07-27 17:31:30,783 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:32:03] 2025-07-27 17:31:30,783 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:32:03] 2025-07-27 17:31:30,783 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:32:03] 2025-07-27 17:31:30,783 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:32:03] 2025-07-27 17:31:30,784 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | sum of square deviations: 48810217.5
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | sum of deviations: -1712808904.5
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | mean x: 1753635729.5
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | mean y: 2554379.574074074
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | -- intersect: 61539729310.9694
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | intersect: 61539729310.9694
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | chi2: 0.0017705443787491757
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | -- intersect: 61539729310.9694
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | current memory leak: -35.09 B/s (using 54 data points, chi2=0.00)
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | could have reported an average CPU frequency of 3785 MHz (6 samples)
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | ..............................
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | . Timing measurements:
[2025-07-27 13:32:03] 2025-07-27 17:31:30,785 | INFO     | . get job = 0 s
[2025-07-27 13:32:03] 2025-07-27 17:31:30,786 | INFO     | . initial setup = 2 s
[2025-07-27 13:32:03] 2025-07-27 17:31:30,786 | INFO     | . payload setup = 5 s
[2025-07-27 13:32:03] 2025-07-27 17:31:30,786 | INFO     | . stage-in = 0 s
[2025-07-27 13:32:03] 2025-07-27 17:31:30,786 | INFO     | . payload execution = 3679 s
[2025-07-27 13:32:03] 2025-07-27 17:31:30,786 | INFO     | . stage-out = 0 s
[2025-07-27 13:32:03] 2025-07-27 17:31:30,786 | INFO     | . log creation = 0 s
[2025-07-27 13:32:03] 2025-07-27 17:31:30,786 | INFO     | ..............................
[2025-07-27 13:32:03] 2025-07-27 17:31:30,842 | INFO     | 
[2025-07-27 13:32:03] 2025-07-27 17:31:30,842 | INFO     | job summary report
[2025-07-27 13:32:03] 2025-07-27 17:31:30,842 | INFO     | --------------------------------------------------
[2025-07-27 13:32:03] 2025-07-27 17:31:30,842 | INFO     | PanDA job id: 6746329844
[2025-07-27 13:32:03] 2025-07-27 17:31:30,842 | INFO     | task id: 45758416
[2025-07-27 13:32:03] 2025-07-27 17:31:30,842 | INFO     | errors: (none)
[2025-07-27 13:32:03] 2025-07-27 17:31:30,842 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:32:03] 2025-07-27 17:31:30,842 | INFO     | pilot state: finished 
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | transexitcode: 0
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | exeerrorcode: 0
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | exeerrordiag: 
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | exitcode: 0
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | exitmsg: OK
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | cpuconsumptiontime: 27774 s
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | nevents: 400
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | neventsw: 0
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | pid: 3511804
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | pgrp: 3511804
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | corecount: 8
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | event service: False
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | sizes: {0: 2397463, 4: 2397725, 11: 2397753, 3688: 2423619, 3689: 2432673, 3693: 2432811}
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | --------------------------------------------------
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | 
[2025-07-27 13:32:03] 2025-07-27 17:31:30,843 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 13:32:03] 2025-07-27 17:31:30,862 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,862 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,862 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,862 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,862 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:32:03] 2025-07-27 17:31:30,863 | INFO     | job 6746329844 has completed (purged errors)
[2025-07-27 13:32:03] 2025-07-27 17:31:30,864 | INFO     | overall cleanup function is called
[2025-07-27 13:32:03] 2025-07-27 17:31:31,871 | INFO     | --- collectZombieJob: --- 10, [3511804]
[2025-07-27 13:32:03] 2025-07-27 17:31:31,871 | INFO     | zombie collector waiting for pid 3511804
[2025-07-27 13:32:03] 2025-07-27 17:31:31,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:32:03] 2025-07-27 17:31:31,871 | INFO     | collected zombie processes
[2025-07-27 13:32:03] 2025-07-27 17:31:31,871 | INFO     | will attempt to kill all subprocesses of pid=3511804
[2025-07-27 13:32:03] 2025-07-27 17:31:32,204 | INFO     | process IDs to be killed: [3511804] (in reverse order)
[2025-07-27 13:32:03] 2025-07-27 17:31:32,317 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:32:03] 2025-07-27 17:31:32,318 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:32:03] 2025-07-27 17:31:32,333 | INFO     | did not find any defunct processes belonging to 3511804
[2025-07-27 13:32:03] 2025-07-27 17:31:32,344 | INFO     | did not find any defunct processes belonging to 3511804
[2025-07-27 13:32:03] 2025-07-27 17:31:32,344 | INFO     | ready for new job
[2025-07-27 13:32:03] 2025-07-27 17:31:32,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:32:03] 2025-07-27 17:31:32,346 | INFO     | ***************************************
[2025-07-27 13:32:03] 2025-07-27 17:31:32,346 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:32:03] 2025-07-27 17:31:32,346 | INFO     | ***************************************
[2025-07-27 13:32:03] 2025-07-27 17:31:32,346 | INFO     | 
[2025-07-27 13:32:03] 2025-07-27 17:31:32,350 | INFO     | architecture information:
[2025-07-27 13:32:03] 2025-07-27 17:31:32,350 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:32:03] 2025-07-27 17:31:32,361 | INFO     | cat /etc/os-release:
[2025-07-27 13:32:03] NAME="CentOS Linux"
[2025-07-27 13:32:03] VERSION="7 (Core)"
[2025-07-27 13:32:03] ID="centos"
[2025-07-27 13:32:03] ID_LIKE="rhel fedora"
[2025-07-27 13:32:03] VERSION_ID="7"
[2025-07-27 13:32:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:32:03] ANSI_COLOR="0;31"
[2025-07-27 13:32:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:32:03] HOME_URL="https://www.centos.org/"
[2025-07-27 13:32:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:32:03] 
[2025-07-27 13:32:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:32:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:32:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:32:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:32:03] 
[2025-07-27 13:32:03] 2025-07-27 17:31:32,361 | INFO     | ***************************************
[2025-07-27 13:32:03] 2025-07-27 17:31:32,863 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 13:32:03] 2025-07-27 17:31:32,876 | INFO     | sufficient remaining disk space (165085708288 B)
[2025-07-27 13:32:03] 2025-07-27 17:31:32,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:32:03] 2025-07-27 17:31:32,876 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:32:03] 2025-07-27 17:31:32,876 | INFO     | update_server=False
[2025-07-27 13:32:03] 2025-07-27 17:31:32,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:32:03] 2025-07-27 17:31:32,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:32:03] 2025-07-27 17:31:32,877 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:32:03] 2025-07-27 17:31:32,878 | INFO     | aborting loop
[2025-07-27 13:32:03] 2025-07-27 17:31:32,997 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:32:03] 2025-07-27 17:31:33,537 | INFO     | all payload control threads have been joined
[2025-07-27 13:32:03] 2025-07-27 17:31:33,824 | INFO     | all data control threads have been joined
[2025-07-27 13:32:03] 2025-07-27 17:31:33,879 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:33,881 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:34,075 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:34,140 | INFO     | all job control threads have been joined
[2025-07-27 13:32:03] 2025-07-27 17:31:34,214 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:34,293 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:34,542 | INFO     | [payload] control thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:34,783 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:34,786 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:34,829 | INFO     | [data] control thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:34,882 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:35,145 | INFO     | [job] control thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:35,355 | INFO     | [job] validate thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:35,356 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:35,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:32:03] 2025-07-27 17:31:36,855 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:37,003 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:43,134 | INFO     | job.realtimelogging is not enabled
[2025-07-27 13:32:03] 2025-07-27 17:31:44,139 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:32:03] 2025-07-27 17:31:45,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140146581763904)>', '<ExcThread(monitor, started 140146083079936)>']
[2025-07-27 13:32:03] 2025-07-27 17:31:50,725 | INFO     | all workflow threads have been joined
[2025-07-27 13:32:03] 2025-07-27 17:31:50,726 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:32:03] 2025-07-27 17:31:50,726 | INFO     | traces error code: 0
[2025-07-27 13:32:03] 2025-07-27 17:31:50,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:32:03] 2025-07-27 17:32:03,552 | INFO     | PID=3505169 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:32:03] 2025-07-27 17:32:03,553 | INFO     | .. there are 15 such processes running
[2025-07-27 13:32:03] 2025-07-27 17:32:03,554 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:32:03] 2025-07-27 17:32:03,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:32:03] 2025-07-27 17:32:03,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:32:03] 2025-07-27 17:32:03,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:32:03] 2025-07-27 17:32:03,554 | INFO     | [monitor] control thread has ended
[2025-07-27 13:32:03] 2025-07-27 17:32:03,653 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:32:03] 2025-07-27 17:32:03,656 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:32:03] 2025-07-27 17:32:03,658 [wrapper] pilotpid: 3505169
[2025-07-27 13:32:03] 2025-07-27 17:32:03,661 [wrapper] Pilot exit status: 0
[2025-07-27 13:32:03] 2025-07-27 17:32:03,673 [wrapper] pandaids: 6746329844
[2025-07-27 13:32:03] 2025-07-27 17:32:03,753 [wrapper] cleanup supervisor_pilot 3870479 3505170
[2025-07-27 13:32:03] 2025-07-27 17:32:03,756 [wrapper] Test setup, not cleaning
[2025-07-27 13:32:03] 2025-07-27 17:32:03,759 [wrapper] apfmon messages muted
[2025-07-27 13:32:03] 2025-07-27 17:32:03,761 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:32:03] 2025-07-27 17:32:03,763 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:32:03]  *** Error codes and diagnostics ***
[2025-07-27 13:32:03]     "exeErrorCode": 0,
[2025-07-27 13:32:03]     "exeErrorDiag": "",
[2025-07-27 13:32:03]     "pilotErrorCode": 0,
[2025-07-27 13:32:03]     "pilotErrorDiag": "",
[2025-07-27 13:32:03]  *** Listing of results directory ***
[2025-07-27 13:32:03] total 404192
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 02:49 pilot3.tar.gz
[2025-07-27 13:32:03] -rwx------. 1 boincer umatlas     36292 Jul 27 03:04 runpilot2-wrapper.sh
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 03:04 queuedata.json
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas       100 Jul 27 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:32:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 12:29 run_atlas
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas       105 Jul 27 12:29 job.xml
[2025-07-27 13:32:03] -rw-r--r--. 2 boincer umatlas 238159143 Jul 27 12:29 EVNT.45758414._000004.pool.root.1
[2025-07-27 13:32:03] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:29 start_atlas.sh
[2025-07-27 13:32:03] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 12:29 shared
[2025-07-27 13:32:03] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 12:29 input.tar.gz
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas         0 Jul 27 12:29 boinc_lockfile
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas      2559 Jul 27 12:29 pandaJob.out
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas    980125 Jul 27 12:29 agis_schedconf.cvmfs.json
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas   1593052 Jul 27 12:29 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:32:03] drwx------. 4 boincer umatlas      4096 Jul 27 12:29 pilot3
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas      7174 Jul 27 13:29 init_data.xml
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas 170544271 Jul 27 13:31 HITS.45758416._000076.pool.root.1
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas       529 Jul 27 13:31 boinc_task_state.xml
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas      1030 Jul 27 13:31 memory_monitor_summary.json
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas    281430 Jul 27 13:31 log.45758416._000076.job.log.tgz.1
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas      7760 Jul 27 13:31 heartbeat.json
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 13:32 boinc_mmap_file
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas        27 Jul 27 13:32 wrapper_checkpoint.txt
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas        95 Jul 27 13:32 pilot_heartbeat.json
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas       823 Jul 27 13:32 pilotlog.txt
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas    378440 Jul 27 13:32 log.45758416._000076.job.log.1
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas       357 Jul 27 13:32 output.list
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas       620 Jul 27 13:32 runtime_log
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas    675840 Jul 27 13:32 result.tar.gz
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 13:32 runtime_log.err
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas       651 Jul 27 13:32 9OfMDmqbA07n9Rq4apOajLDm4fhM0noT9bVof3QYDm271KDmPrOPHm.diag
[2025-07-27 13:32:03] -rw-r--r--. 1 boincer umatlas     21462 Jul 27 13:32 stderr.txt
[2025-07-27 13:32:03] HITS file was successfully produced:
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas 170544271 Jul 27 13:31 shared/HITS.pool.root.1
[2025-07-27 13:32:03]  *** Contents of shared directory: ***
[2025-07-27 13:32:03] total 400340
[2025-07-27 13:32:03] -rw-r--r--. 2 boincer umatlas 238159143 Jul 27 12:29 ATLAS.root_0
[2025-07-27 13:32:03] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:29 start_atlas.sh
[2025-07-27 13:32:03] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 12:29 input.tar.gz
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas 170544271 Jul 27 13:31 HITS.pool.root.1
[2025-07-27 13:32:03] -rw-------. 1 boincer umatlas    675840 Jul 27 13:32 result.tar.gz
13:32:04 (3501576): run_atlas exited; CPU time 27862.923964
13:32:04 (3501576): called boinc_finish(0)

</stderr_txt>
]]>

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