Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:32:48 (320717): wrapper (7.7.26015): starting
12:32:48 (320717): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 12:32:48] Arguments: --nthreads 10
[2025-07-27 12:32:48] Threads: 10
[2025-07-27 12:32:48] Checking for CVMFS
[2025-07-27 12:32:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:32:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:32:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:32:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:32:49] 2.13.1.0 158023 6931 157960 148818 0 105 36521745 39288833 4764 16776704 0 6521010 99.625 8875503 39460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 12:32:49] CVMFS is ok
[2025-07-27 12:32:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:32:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:32:49] Further information can be found at the LHC@home message board.
[2025-07-27 12:32:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:32:49] Checking for apptainer binary...
[2025-07-27 12:32:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:32:49] Running /usr/bin/apptainer --version
[2025-07-27 12:32:49] apptainer version 1.4.1-1.el9
[2025-07-27 12:32:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:32:49] c-210-6.aglt2.org
[2025-07-27 12:32:49] apptainer works
[2025-07-27 12:32:49] Set ATHENA_PROC_NUMBER=10
[2025-07-27 12:32:49] Set ATHENA_CORE_NUMBER=10
[2025-07-27 12:32:49] Starting ATLAS job with PandaID=6747376145
[2025-07-27 12:32:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 14:13:14]  *** The last 200 lines of the pilot log: ***
[2025-07-27 14:13:14]  scope=mc23_13p6TeV
[2025-07-27 14:13:14]  status=None
[2025-07-27 14:13:14]  status_code=0
[2025-07-27 14:13:14]  storage_token=
[2025-07-27 14:13:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747376145/log.45743349._047380.job.log.tgz.1
[2025-07-27 14:13:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/45/log.45743349._047380.job.log.tgz.1
[2025-07-27 14:13:14]  workdir=None
[2025-07-27 14:13:14] ]
[2025-07-27 14:13:14] 2025-07-27 18:12:31,983 | INFO     | transferring file log.45743349._047380.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747376145/log.45743349._047380.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 14:13:14] 2025-07-27 18:12:31,984 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747376145/log.45743349._047380.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._047380.job
[2025-07-27 14:13:14] 2025-07-27 18:12:32,010 | INFO     | adding to output.list: log.45743349._047380.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/45/log.45743349._047380.job.log.tg
[2025-07-27 14:13:14] 2025-07-27 18:12:32,011 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 14:13:14] 2025-07-27 18:12:32,011 | INFO     | summary of transferred files:
[2025-07-27 14:13:14] 2025-07-27 18:12:32,011 | INFO     |  -- lfn=log.45743349._047380.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 14:13:14] 2025-07-27 18:12:32,012 | INFO     | stage-out finished correctly
[2025-07-27 14:13:14] 2025-07-27 18:12:33,167 | INFO     | monitor loop #444: job 0:6747376145 is in state 'finished'
[2025-07-27 14:13:14] 2025-07-27 18:12:33,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 14:13:14] 2025-07-27 18:12:33,381 | INFO     | PID=324300 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 14:13:14] 2025-07-27 18:12:33,382 | INFO     | .. there are 6 such processes running
[2025-07-27 14:13:14] 2025-07-27 18:12:34,350 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 14:13:14] 2025-07-27 18:12:35,671 | INFO     | monitor loop #445: job 0:6747376145 is in state 'finished'
[2025-07-27 14:13:14] 2025-07-27 18:12:35,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 14:13:14] 2025-07-27 18:12:36,910 | INFO     | job 6747376145 has state=finished
[2025-07-27 14:13:14] 2025-07-27 18:12:36,910 | INFO     | preparing for final server update for job 6747376145 in state='finished'
[2025-07-27 14:13:14] 2025-07-27 18:12:36,978 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 14:13:14] 2025-07-27 18:12:36,978 | INFO     | this job has now completed (state=finished)
[2025-07-27 14:13:14] 2025-07-27 18:12:36,978 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 14:13:14] 2025-07-27 18:12:36,979 | INFO     | log transfer has been attempted: DONE
[2025-07-27 14:13:14] 2025-07-27 18:12:36,979 | INFO     | job 6747376145 has finished - writing final server update
[2025-07-27 14:13:14] 2025-07-27 18:12:36,979 | INFO     | total number of processed events: 400 (read)
[2025-07-27 14:13:14] 2025-07-27 18:12:36,980 | INFO     | executing command: lscpu
[2025-07-27 14:13:14] 2025-07-27 18:12:37,035 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 14:13:14] 2025-07-27 18:12:38,174 | INFO     | monitor loop #446: job 0:6747376145 is in state 'finished'
[2025-07-27 14:13:14] 2025-07-27 18:12:38,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 14:13:14] 2025-07-27 18:12:40,678 | INFO     | monitor loop #447: job 0:6747376145 is in state 'finished'
[2025-07-27 14:13:14] 2025-07-27 18:12:40,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 14:13:14] 2025-07-27 18:12:41,783 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 14:13:14] 2025-07-27 18:12:41,789 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1715249999997
[2025-07-27 14:13:14] 2025-07-27 18:12:41,796 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747376145/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 14:13:14] 2025-07-27 18:12:41,797 | INFO     | extracted standard info from prmon json
[2025-07-27 14:13:14] 2025-07-27 18:12:41,797 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 14:13:14] 2025-07-27 18:12:41,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 14:13:14] 2025-07-27 18:12:41,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 14:13:14] 2025-07-27 18:12:41,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 14:13:14] 2025-07-27 18:12:41,800 | INFO     | fitting pss+swap vs Time
[2025-07-27 14:13:14] 2025-07-27 18:12:41,800 | INFO     | sum of square deviations: 233641590.0
[2025-07-27 14:13:14] 2025-07-27 18:12:41,801 | INFO     | sum of deviations: -22146975553.0
[2025-07-27 14:13:14] 2025-07-27 18:12:41,801 | INFO     | mean x: 1753637059.0
[2025-07-27 14:13:14] 2025-07-27 18:12:41,801 | INFO     | mean y: 2820769.824175824
[2025-07-27 14:13:14] 2025-07-27 18:12:41,801 | INFO     | -- intersect: 166230747375.30493
[2025-07-27 14:13:14] 2025-07-27 18:12:41,801 | INFO     | intersect: 166230747375.30493
[2025-07-27 14:13:14] 2025-07-27 18:12:41,802 | INFO     | chi2: 0.15937950875895168
[2025-07-27 14:13:14] 2025-07-27 18:12:41,802 | INFO     | -- intersect: 166230747375.30493
[2025-07-27 14:13:14] 2025-07-27 18:12:41,802 | INFO     | current memory leak: -94.79 B/s (using 91 data points, chi2=0.16)
[2025-07-27 14:13:14] 2025-07-27 18:12:41,802 | INFO     | could have reported an average CPU frequency of 2594 MHz (7 samples)
[2025-07-27 14:13:14] 2025-07-27 18:12:41,802 | INFO     | ..............................
[2025-07-27 14:13:14] 2025-07-27 18:12:41,802 | INFO     | . Timing measurements:
[2025-07-27 14:13:14] 2025-07-27 18:12:41,803 | INFO     | . get job = 0 s
[2025-07-27 14:13:14] 2025-07-27 18:12:41,803 | INFO     | . initial setup = 2 s
[2025-07-27 14:13:14] 2025-07-27 18:12:41,803 | INFO     | . payload setup = 7 s
[2025-07-27 14:13:14] 2025-07-27 18:12:41,803 | INFO     | . stage-in = 0 s
[2025-07-27 14:13:14] 2025-07-27 18:12:41,803 | INFO     | . payload execution = 5941 s
[2025-07-27 14:13:14] 2025-07-27 18:12:41,803 | INFO     | . stage-out = 0 s
[2025-07-27 14:13:14] 2025-07-27 18:12:41,803 | INFO     | . log creation = 0 s
[2025-07-27 14:13:14] 2025-07-27 18:12:41,803 | INFO     | ..............................
[2025-07-27 14:13:14] 2025-07-27 18:12:41,911 | INFO     | 
[2025-07-27 14:13:14] 2025-07-27 18:12:41,911 | INFO     | job summary report
[2025-07-27 14:13:14] 2025-07-27 18:12:41,911 | INFO     | --------------------------------------------------
[2025-07-27 14:13:14] 2025-07-27 18:12:41,912 | INFO     | PanDA job id: 6747376145
[2025-07-27 14:13:14] 2025-07-27 18:12:41,912 | INFO     | task id: 45743349
[2025-07-27 14:13:14] 2025-07-27 18:12:41,912 | INFO     | errors: (none)
[2025-07-27 14:13:14] 2025-07-27 18:12:41,912 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 14:13:14] 2025-07-27 18:12:41,912 | INFO     | pilot state: finished 
[2025-07-27 14:13:14] 2025-07-27 18:12:41,913 | INFO     | transexitcode: 0
[2025-07-27 14:13:14] 2025-07-27 18:12:41,913 | INFO     | exeerrorcode: 0
[2025-07-27 14:13:14] 2025-07-27 18:12:41,913 | INFO     | exeerrordiag: 
[2025-07-27 14:13:14] 2025-07-27 18:12:41,913 | INFO     | exitcode: 0
[2025-07-27 14:13:14] 2025-07-27 18:12:41,913 | INFO     | exitmsg: OK
[2025-07-27 14:13:14] 2025-07-27 18:12:41,913 | INFO     | cpuconsumptiontime: 54358 s
[2025-07-27 14:13:14] 2025-07-27 18:12:41,913 | INFO     | nevents: 400
[2025-07-27 14:13:14] 2025-07-27 18:12:41,913 | INFO     | neventsw: 0
[2025-07-27 14:13:14] 2025-07-27 18:12:41,913 | INFO     | pid: 330702
[2025-07-27 14:13:14] 2025-07-27 18:12:41,913 | INFO     | pgrp: 330702
[2025-07-27 14:13:14] 2025-07-27 18:12:41,914 | INFO     | corecount: 10
[2025-07-27 14:13:14] 2025-07-27 18:12:41,914 | INFO     | event service: False
[2025-07-27 14:13:14] 2025-07-27 18:12:41,914 | INFO     | sizes: {0: 2397475, 1: 2397475, 5: 2397765, 11: 2397821, 5952: 2424487, 5953: 2424486, 5955: 2433668, 5957: 2433724, 5965: 2433918}
[2025-07-27 14:13:14] 2025-07-27 18:12:41,914 | INFO     | --------------------------------------------------
[2025-07-27 14:13:14] 2025-07-27 18:12:41,914 | INFO     | 
[2025-07-27 14:13:14] 2025-07-27 18:12:41,914 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 14:13:14] 2025-07-27 18:12:41,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,940 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,940 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,940 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,941 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,941 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,941 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,941 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,942 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,942 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,942 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,942 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,942 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,942 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 14:13:14] 2025-07-27 18:12:41,943 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,943 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 14:13:14] 2025-07-27 18:12:41,943 | INFO     | job 6747376145 has completed (purged errors)
[2025-07-27 14:13:14] 2025-07-27 18:12:41,943 | INFO     | overall cleanup function is called
[2025-07-27 14:13:14] 2025-07-27 18:12:42,951 | INFO     | --- collectZombieJob: --- 10, [330702]
[2025-07-27 14:13:14] 2025-07-27 18:12:42,952 | INFO     | zombie collector waiting for pid 330702
[2025-07-27 14:13:14] 2025-07-27 18:12:42,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 14:13:14] 2025-07-27 18:12:42,952 | INFO     | collected zombie processes
[2025-07-27 14:13:14] 2025-07-27 18:12:42,952 | INFO     | will attempt to kill all subprocesses of pid=330702
[2025-07-27 14:13:14] 2025-07-27 18:12:43,192 | INFO     | process IDs to be killed: [330702] (in reverse order)
[2025-07-27 14:13:14] 2025-07-27 18:12:43,263 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 14:13:14] 2025-07-27 18:12:43,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 14:13:14] 2025-07-27 18:12:43,270 | INFO     | did not find any defunct processes belonging to 330702
[2025-07-27 14:13:14] 2025-07-27 18:12:43,276 | INFO     | did not find any defunct processes belonging to 330702
[2025-07-27 14:13:14] 2025-07-27 18:12:43,277 | INFO     | ready for new job
[2025-07-27 14:13:14] 2025-07-27 18:12:43,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 14:13:14] 2025-07-27 18:12:43,278 | INFO     | ***************************************
[2025-07-27 14:13:14] 2025-07-27 18:12:43,279 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 14:13:14] 2025-07-27 18:12:43,279 | INFO     | ***************************************
[2025-07-27 14:13:14] 2025-07-27 18:12:43,279 | INFO     | 
[2025-07-27 14:13:14] 2025-07-27 18:12:43,280 | INFO     | architecture information:
[2025-07-27 14:13:14] 2025-07-27 18:12:43,281 | INFO     | executing command: cat /etc/os-release
[2025-07-27 14:13:14] 2025-07-27 18:12:43,295 | INFO     | cat /etc/os-release:
[2025-07-27 14:13:14] NAME="CentOS Linux"
[2025-07-27 14:13:14] VERSION="7 (Core)"
[2025-07-27 14:13:14] ID="centos"
[2025-07-27 14:13:14] ID_LIKE="rhel fedora"
[2025-07-27 14:13:14] VERSION_ID="7"
[2025-07-27 14:13:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 14:13:14] ANSI_COLOR="0;31"
[2025-07-27 14:13:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 14:13:14] HOME_URL="https://www.centos.org/"
[2025-07-27 14:13:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 14:13:14] 
[2025-07-27 14:13:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 14:13:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 14:13:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 14:13:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 14:13:14] 
[2025-07-27 14:13:14] 2025-07-27 18:12:43,295 | INFO     | ***************************************
[2025-07-27 14:13:14] 2025-07-27 18:12:43,797 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 14:13:14] 2025-07-27 18:12:43,814 | INFO     | sufficient remaining disk space (54002712576 B)
[2025-07-27 14:13:14] 2025-07-27 18:12:43,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 14:13:14] 2025-07-27 18:12:43,815 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 14:13:14] 2025-07-27 18:12:43,815 | INFO     | update_server=False
[2025-07-27 14:13:14] 2025-07-27 18:12:43,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 14:13:14] 2025-07-27 18:12:43,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:13:14] 2025-07-27 18:12:43,827 | INFO     | all job control threads have been joined
[2025-07-27 14:13:14] 2025-07-27 18:12:44,188 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:13:14] 2025-07-27 18:12:44,188 | INFO     | aborting loop
[2025-07-27 14:13:14] 2025-07-27 18:12:44,507 | INFO     | all data control threads have been joined
[2025-07-27 14:13:14] 2025-07-27 18:12:44,820 | INFO     | [job] retrieve thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:44,821 | INFO     | [job] queue monitor thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:44,824 | INFO     | all payload control threads have been joined
[2025-07-27 14:13:14] 2025-07-27 18:12:44,832 | INFO     | [job] control thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:44,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 14:13:14] 2025-07-27 18:12:44,984 | INFO     | [job] validate thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:45,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 14:13:14] 2025-07-27 18:12:45,193 | INFO     | [job] job monitor thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:45,247 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:45,285 | INFO     | [payload] validate_post thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:45,395 | INFO     | [data] copytool_in thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:45,512 | INFO     | [data] control thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:45,829 | INFO     | [payload] control thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:45,885 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:45,909 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:45,982 | INFO     | [payload] failed_post thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:47,136 | INFO     | [data] copytool_out thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:48,953 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:53,972 | INFO     | job.realtimelogging is not enabled
[2025-07-27 14:13:14] 2025-07-27 18:12:54,977 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 14:13:14] 2025-07-27 18:12:56,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229682521920)>', '<ExcThread(monitor, started 140229046421248)>']
[2025-07-27 14:13:14] 2025-07-27 18:13:01,385 | INFO     | all workflow threads have been joined
[2025-07-27 14:13:14] 2025-07-27 18:13:01,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 14:13:14] 2025-07-27 18:13:01,386 | INFO     | traces error code: 0
[2025-07-27 14:13:14] 2025-07-27 18:13:01,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 14:13:14] 2025-07-27 18:13:13,816 | INFO     | PID=324300 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 14:13:14] 2025-07-27 18:13:13,816 | INFO     | .. there are 6 such processes running
[2025-07-27 14:13:14] 2025-07-27 18:13:13,817 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 14:13:14] 2025-07-27 18:13:13,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 14:13:14] 2025-07-27 18:13:13,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 14:13:14] 2025-07-27 18:13:13,818 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 14:13:14] 2025-07-27 18:13:13,818 | INFO     | [monitor] control thread has ended
[2025-07-27 14:13:14] 2025-07-27 18:13:14,027 [wrapper] ==== pilot stdout END ====
[2025-07-27 14:13:14] 2025-07-27 18:13:14,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 14:13:14] 2025-07-27 18:13:14,034 [wrapper] pilotpid: 324300
[2025-07-27 14:13:14] 2025-07-27 18:13:14,037 [wrapper] Pilot exit status: 0
[2025-07-27 14:13:14] 2025-07-27 18:13:14,050 [wrapper] pandaids: 6747376145
[2025-07-27 14:13:14] 2025-07-27 18:13:14,091 [wrapper] cleanup supervisor_pilot  424096 324301
[2025-07-27 14:13:14] 2025-07-27 18:13:14,094 [wrapper] Test setup, not cleaning
[2025-07-27 14:13:14] 2025-07-27 18:13:14,098 [wrapper] apfmon messages muted
[2025-07-27 14:13:14] 2025-07-27 18:13:14,101 [wrapper] ==== wrapper stdout END ====
[2025-07-27 14:13:14] 2025-07-27 18:13:14,103 [wrapper] ==== wrapper stderr END ====
[2025-07-27 14:13:14]  *** Error codes and diagnostics ***
[2025-07-27 14:13:14]     "exeErrorCode": 0,
[2025-07-27 14:13:14]     "exeErrorDiag": "",
[2025-07-27 14:13:14]     "pilotErrorCode": 0,
[2025-07-27 14:13:14]     "pilotErrorDiag": "",
[2025-07-27 14:13:14]  *** Listing of results directory ***
[2025-07-27 14:13:14] total 349904
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 06:53 pilot3.tar.gz
[2025-07-27 14:13:14] -rwx------. 1 boincer umatlas     36292 Jul 27 06:59 runpilot2-wrapper.sh
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 06:59 queuedata.json
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas       100 Jul 27 12:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 14:13:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 12:32 run_atlas
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas       105 Jul 27 12:32 job.xml
[2025-07-27 14:13:14] -rw-r--r--. 2 boincer umatlas 142267418 Jul 27 12:32 EVNT.45743347._002633.pool.root.1
[2025-07-27 14:13:14] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:32 start_atlas.sh
[2025-07-27 14:13:14] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 12:32 shared
[2025-07-27 14:13:14] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 12:32 input.tar.gz
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas         0 Jul 27 12:32 boinc_lockfile
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 12:32 pandaJob.out
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas    980125 Jul 27 12:32 agis_schedconf.cvmfs.json
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas   1593052 Jul 27 12:32 agis_ddmendpoints.agis.ALL.json
[2025-07-27 14:13:14] drwx------. 4 boincer umatlas      4096 Jul 27 12:33 pilot3
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas      6657 Jul 27 14:09 init_data.xml
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas 210316420 Jul 27 14:11 HITS.45743349._047380.pool.root.1
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas       529 Jul 27 14:11 boinc_task_state.xml
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas      1030 Jul 27 14:12 memory_monitor_summary.json
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas    343231 Jul 27 14:12 log.45743349._047380.job.log.tgz.1
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas      7810 Jul 27 14:12 heartbeat.json
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 14:13 boinc_mmap_file
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas        27 Jul 27 14:13 wrapper_checkpoint.txt
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas       821 Jul 27 14:13 pilotlog.txt
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas        95 Jul 27 14:13 pilot_heartbeat.json
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas    578600 Jul 27 14:13 log.45743349._047380.job.log.1
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas       357 Jul 27 14:13 output.list
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas       620 Jul 27 14:13 runtime_log
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas    942080 Jul 27 14:13 result.tar.gz
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas      8657 Jul 27 14:13 runtime_log.err
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas       652 Jul 27 14:13 1JhMDmPHE07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmc5ULDmxFKvjm.diag
[2025-07-27 14:13:14] -rw-r--r--. 1 boincer umatlas     22049 Jul 27 14:13 stderr.txt
[2025-07-27 14:13:14] HITS file was successfully produced:
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas 210316420 Jul 27 14:11 shared/HITS.pool.root.1
[2025-07-27 14:13:14]  *** Contents of shared directory: ***
[2025-07-27 14:13:14] total 345796
[2025-07-27 14:13:14] -rw-r--r--. 2 boincer umatlas 142267418 Jul 27 12:32 ATLAS.root_0
[2025-07-27 14:13:14] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:32 start_atlas.sh
[2025-07-27 14:13:14] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 12:32 input.tar.gz
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas 210316420 Jul 27 14:11 HITS.pool.root.1
[2025-07-27 14:13:14] -rw-------. 1 boincer umatlas    942080 Jul 27 14:13 result.tar.gz
14:13:15 (320717): run_atlas exited; CPU time 54449.218545
14:13:15 (320717): called boinc_finish(0)

</stderr_txt>
]]>

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