Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:07:08 (271807): wrapper (7.7.26015): starting
14:07:08 (271807): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 14:07:08] Arguments: --nthreads 12
[2025-07-27 14:07:08] Threads: 12
[2025-07-27 14:07:08] Checking for CVMFS
[2025-07-27 14:07:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:07:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:07:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:07:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:07:09] 2.12.6.0 1263230 18703 333404 148820 0 64 28336998 32935937 6359 16776704 0 36508174 99.607 57956149 29027 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 14:07:09] CVMFS is ok
[2025-07-27 14:07:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:07:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:07:09] Further information can be found at the LHC@home message board.
[2025-07-27 14:07:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:07:09] Checking for apptainer binary...
[2025-07-27 14:07:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:07:09] Running /usr/bin/apptainer --version
[2025-07-27 14:07:09] apptainer version 1.4.1-1.el9
[2025-07-27 14:07:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:07:09] c6-5-7-2.aglt2.org
[2025-07-27 14:07:09] apptainer works
[2025-07-27 14:07:09] Set ATHENA_PROC_NUMBER=12
[2025-07-27 14:07:09] Set ATHENA_CORE_NUMBER=12
[2025-07-27 14:07:09] Starting ATLAS job with PandaID=6747376084
[2025-07-27 14:07:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:30:07]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:30:07]  mtime=0
[2025-07-27 15:30:07]  protocol_id=None
[2025-07-27 15:30:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 15:30:07]  replicas=None
[2025-07-27 15:30:07]  scope=mc23_13p6TeV
[2025-07-27 15:30:07]  status=None
[2025-07-27 15:30:07]  status_code=0
[2025-07-27 15:30:07]  storage_token=
[2025-07-27 15:30:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747376084/log.45743349._047319.job.log.tgz.1
[2025-07-27 15:30:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/8e/log.45743349._047319.job.log.tgz.1
[2025-07-27 15:30:07]  workdir=None
[2025-07-27 15:30:07] ]
[2025-07-27 15:30:07] 2025-07-27 19:29:39,174 | INFO     | transferring file log.45743349._047319.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747376084/log.45743349._047319.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 15:30:07] 2025-07-27 19:29:39,174 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747376084/log.45743349._047319.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._047319.job
[2025-07-27 15:30:07] 2025-07-27 19:29:39,197 | INFO     | adding to output.list: log.45743349._047319.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/8e/log.45743349._047319.job.log.tg
[2025-07-27 15:30:07] 2025-07-27 19:29:39,198 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 15:30:07] 2025-07-27 19:29:39,198 | INFO     | summary of transferred files:
[2025-07-27 15:30:07] 2025-07-27 19:29:39,199 | INFO     |  -- lfn=log.45743349._047319.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 15:30:07] 2025-07-27 19:29:39,199 | INFO     | stage-out finished correctly
[2025-07-27 15:30:07] 2025-07-27 19:29:39,531 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 15:30:07] 2025-07-27 19:29:40,174 | INFO     | job 6747376084 has state=finished
[2025-07-27 15:30:07] 2025-07-27 19:29:40,174 | INFO     | preparing for final server update for job 6747376084 in state='finished'
[2025-07-27 15:30:07] 2025-07-27 19:29:40,175 | INFO     | this job has now completed (state=finished)
[2025-07-27 15:30:07] 2025-07-27 19:29:40,175 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 15:30:07] 2025-07-27 19:29:40,175 | INFO     | log transfer has been attempted: DONE
[2025-07-27 15:30:07] 2025-07-27 19:29:40,175 | INFO     | job 6747376084 has finished - writing final server update
[2025-07-27 15:30:07] 2025-07-27 19:29:40,175 | INFO     | total number of processed events: 400 (read)
[2025-07-27 15:30:07] 2025-07-27 19:29:40,177 | INFO     | executing command: lscpu
[2025-07-27 15:30:07] 2025-07-27 19:29:40,244 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 15:30:07] 2025-07-27 19:29:40,281 | INFO     | monitor loop #363: job 0:6747376084 is in state 'finished'
[2025-07-27 15:30:07] 2025-07-27 19:29:40,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:30:07] 2025-07-27 19:29:42,787 | INFO     | monitor loop #364: job 0:6747376084 is in state 'finished'
[2025-07-27 15:30:07] 2025-07-27 19:29:42,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:30:07] 2025-07-27 19:29:45,289 | INFO     | monitor loop #365: job 0:6747376084 is in state 'finished'
[2025-07-27 15:30:07] 2025-07-27 19:29:45,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:30:07] 2025-07-27 19:29:45,748 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 15:30:07] 2025-07-27 19:29:45,756 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2733.6814285714286
[2025-07-27 15:30:07] 2025-07-27 19:29:45,779 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747376084/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:30:07] 2025-07-27 19:29:45,780 | INFO     | extracted standard info from prmon json
[2025-07-27 15:30:07] 2025-07-27 19:29:45,780 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:30:07] 2025-07-27 19:29:45,780 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:30:07] 2025-07-27 19:29:45,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:30:07] 2025-07-27 19:29:45,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:30:07] 2025-07-27 19:29:45,782 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:30:07] 2025-07-27 19:29:45,783 | INFO     | sum of square deviations: 125630262.5
[2025-07-27 15:30:07] 2025-07-27 19:29:45,783 | INFO     | sum of deviations: 3288979669.5000014
[2025-07-27 15:30:07] 2025-07-27 19:29:45,783 | INFO     | mean x: 1753642201.5
[2025-07-27 15:30:07] 2025-07-27 19:29:45,783 | INFO     | mean y: 2381453.689189189
[2025-07-27 15:30:07] 2025-07-27 19:29:45,783 | INFO     | -- intersect: -45907683792.8172
[2025-07-27 15:30:07] 2025-07-27 19:29:45,783 | INFO     | intersect: -45907683792.8172
[2025-07-27 15:30:07] 2025-07-27 19:29:45,784 | INFO     | chi2: 0.027959915752502923
[2025-07-27 15:30:07] 2025-07-27 19:29:45,784 | INFO     | -- intersect: -45907683792.8172
[2025-07-27 15:30:07] 2025-07-27 19:29:45,784 | INFO     | current memory leak: 26.18 B/s (using 74 data points, chi2=0.03)
[2025-07-27 15:30:07] 2025-07-27 19:29:45,784 | INFO     | could have reported an average CPU frequency of 2755 MHz (6 samples)
[2025-07-27 15:30:07] 2025-07-27 19:29:45,784 | INFO     | ..............................
[2025-07-27 15:30:07] 2025-07-27 19:29:45,784 | INFO     | . Timing measurements:
[2025-07-27 15:30:07] 2025-07-27 19:29:45,784 | INFO     | . get job = 0 s
[2025-07-27 15:30:07] 2025-07-27 19:29:45,785 | INFO     | . initial setup = 2 s
[2025-07-27 15:30:07] 2025-07-27 19:29:45,785 | INFO     | . payload setup = 7 s
[2025-07-27 15:30:07] 2025-07-27 19:29:45,785 | INFO     | . stage-in = 0 s
[2025-07-27 15:30:07] 2025-07-27 19:29:45,785 | INFO     | . payload execution = 4908 s
[2025-07-27 15:30:07] 2025-07-27 19:29:45,785 | INFO     | . stage-out = 0 s
[2025-07-27 15:30:07] 2025-07-27 19:29:45,785 | INFO     | . log creation = 0 s
[2025-07-27 15:30:07] 2025-07-27 19:29:45,785 | INFO     | ..............................
[2025-07-27 15:30:07] 2025-07-27 19:29:45,870 | INFO     | 
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | job summary report
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | --------------------------------------------------
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | PanDA job id: 6747376084
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | task id: 45743349
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | errors: (none)
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | pilot state: finished 
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | transexitcode: 0
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | exeerrorcode: 0
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | exeerrordiag: 
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | exitcode: 0
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | exitmsg: OK
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | cpuconsumptiontime: 50086 s
[2025-07-27 15:30:07] 2025-07-27 19:29:45,871 | INFO     | nevents: 400
[2025-07-27 15:30:07] 2025-07-27 19:29:45,872 | INFO     | neventsw: 0
[2025-07-27 15:30:07] 2025-07-27 19:29:45,872 | INFO     | pid: 283782
[2025-07-27 15:30:07] 2025-07-27 19:29:45,872 | INFO     | pgrp: 283782
[2025-07-27 15:30:07] 2025-07-27 19:29:45,872 | INFO     | corecount: 12
[2025-07-27 15:30:07] 2025-07-27 19:29:45,872 | INFO     | event service: False
[2025-07-27 15:30:07] 2025-07-27 19:29:45,872 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 4919: 2424095, 4920: 2424094, 4921: 2433148, 4922: 2433332, 4928: 2433526}
[2025-07-27 15:30:07] 2025-07-27 19:29:45,872 | INFO     | --------------------------------------------------
[2025-07-27 15:30:07] 2025-07-27 19:29:45,872 | INFO     | 
[2025-07-27 15:30:07] 2025-07-27 19:29:45,872 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 15:30:07] 2025-07-27 19:29:45,894 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,894 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,894 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,894 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:30:07] 2025-07-27 19:29:45,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,896 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:30:07] 2025-07-27 19:29:45,896 | INFO     | job 6747376084 has completed (purged errors)
[2025-07-27 15:30:07] 2025-07-27 19:29:45,896 | INFO     | overall cleanup function is called
[2025-07-27 15:30:07] 2025-07-27 19:29:46,904 | INFO     | --- collectZombieJob: --- 10, [283782]
[2025-07-27 15:30:07] 2025-07-27 19:29:46,904 | INFO     | zombie collector waiting for pid 283782
[2025-07-27 15:30:07] 2025-07-27 19:29:46,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:30:07] 2025-07-27 19:29:46,905 | INFO     | collected zombie processes
[2025-07-27 15:30:07] 2025-07-27 19:29:46,905 | INFO     | will attempt to kill all subprocesses of pid=283782
[2025-07-27 15:30:07] 2025-07-27 19:29:47,181 | INFO     | PID=275560 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 15:30:07] 2025-07-27 19:29:47,181 | INFO     | .. there are 11 such processes running
[2025-07-27 15:30:07] 2025-07-27 19:29:47,355 | INFO     | process IDs to be killed: [283782] (in reverse order)
[2025-07-27 15:30:07] 2025-07-27 19:29:47,468 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:30:07] 2025-07-27 19:29:47,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:30:07] 2025-07-27 19:29:47,480 | INFO     | did not find any defunct processes belonging to 283782
[2025-07-27 15:30:07] 2025-07-27 19:29:47,490 | INFO     | did not find any defunct processes belonging to 283782
[2025-07-27 15:30:07] 2025-07-27 19:29:47,491 | INFO     | ready for new job
[2025-07-27 15:30:07] 2025-07-27 19:29:47,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:30:07] 2025-07-27 19:29:47,493 | INFO     | ***************************************
[2025-07-27 15:30:07] 2025-07-27 19:29:47,493 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:30:07] 2025-07-27 19:29:47,493 | INFO     | ***************************************
[2025-07-27 15:30:07] 2025-07-27 19:29:47,493 | INFO     | 
[2025-07-27 15:30:07] 2025-07-27 19:29:47,508 | INFO     | architecture information:
[2025-07-27 15:30:07] 2025-07-27 19:29:47,509 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:30:07] 2025-07-27 19:29:47,525 | INFO     | cat /etc/os-release:
[2025-07-27 15:30:07] NAME="CentOS Linux"
[2025-07-27 15:30:07] VERSION="7 (Core)"
[2025-07-27 15:30:07] ID="centos"
[2025-07-27 15:30:07] ID_LIKE="rhel fedora"
[2025-07-27 15:30:07] VERSION_ID="7"
[2025-07-27 15:30:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:30:07] ANSI_COLOR="0;31"
[2025-07-27 15:30:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:30:07] HOME_URL="https://www.centos.org/"
[2025-07-27 15:30:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:30:07] 
[2025-07-27 15:30:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:30:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:30:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:30:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:30:07] 
[2025-07-27 15:30:07] 2025-07-27 19:29:47,526 | INFO     | ***************************************
[2025-07-27 15:30:07] 2025-07-27 19:29:48,029 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 15:30:07] 2025-07-27 19:29:48,049 | INFO     | sufficient remaining disk space (76459016192 B)
[2025-07-27 15:30:07] 2025-07-27 19:29:48,050 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:30:07] 2025-07-27 19:29:48,051 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:30:07] 2025-07-27 19:29:48,051 | INFO     | update_server=False
[2025-07-27 15:30:07] 2025-07-27 19:29:48,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:30:07] 2025-07-27 19:29:48,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:30:07] 2025-07-27 19:29:48,052 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 15:30:07] 2025-07-27 19:29:48,052 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:30:07] 2025-07-27 19:29:48,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:30:07] 2025-07-27 19:29:48,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:30:07] 2025-07-27 19:29:48,398 | INFO     | all data control threads have been joined
[2025-07-27 15:30:07] 2025-07-27 19:29:48,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:30:07] 2025-07-27 19:29:48,799 | INFO     | aborting loop
[2025-07-27 15:30:07] 2025-07-27 19:29:48,824 | INFO     | all job control threads have been joined
[2025-07-27 15:30:07] 2025-07-27 19:29:49,056 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:49,200 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:49,228 | INFO     | all payload control threads have been joined
[2025-07-27 15:30:07] 2025-07-27 19:29:49,375 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:49,402 | INFO     | [data] control thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:49,405 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:49,436 | INFO     | [job] validate thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:49,747 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:49,804 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:49,829 | INFO     | [job] control thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:49,833 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:50,058 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:50,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:30:07] 2025-07-27 19:29:50,233 | INFO     | [payload] control thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:50,253 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:50,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:30:07] 2025-07-27 19:29:51,885 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:54,140 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:29:58,996 | INFO     | job.realtimelogging is not enabled
[2025-07-27 15:30:07] 2025-07-27 19:30:00,001 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:30:07] 2025-07-27 19:30:02,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474178361152)>', '<ExcThread(monitor, started 140473414973184)>']
[2025-07-27 15:30:07] 2025-07-27 19:30:02,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:30:07] 2025-07-27 19:30:02,123 | INFO     | [monitor] control thread has ended
[2025-07-27 15:30:07] 2025-07-27 19:30:07,115 | INFO     | all workflow threads have been joined
[2025-07-27 15:30:07] 2025-07-27 19:30:07,116 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:30:07] 2025-07-27 19:30:07,116 | INFO     | traces error code: 0
[2025-07-27 15:30:07] 2025-07-27 19:30:07,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:30:07] 2025-07-27 19:30:07,404 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:30:07] 2025-07-27 19:30:07,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:30:07] 2025-07-27 19:30:07,412 [wrapper] pilotpid: 275560
[2025-07-27 15:30:07] 2025-07-27 19:30:07,415 [wrapper] Pilot exit status: 0
[2025-07-27 15:30:07] 2025-07-27 19:30:07,432 [wrapper] pandaids: 6747376084
[2025-07-27 15:30:07] 2025-07-27 19:30:07,514 [wrapper] cleanup supervisor_pilot  546745 275561
[2025-07-27 15:30:07] 2025-07-27 19:30:07,519 [wrapper] Test setup, not cleaning
[2025-07-27 15:30:07] 2025-07-27 19:30:07,524 [wrapper] apfmon messages muted
[2025-07-27 15:30:07] 2025-07-27 19:30:07,529 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:30:07] 2025-07-27 19:30:07,533 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:30:07]  *** Error codes and diagnostics ***
[2025-07-27 15:30:07]     "exeErrorCode": 0,
[2025-07-27 15:30:07]     "exeErrorDiag": "",
[2025-07-27 15:30:07]     "pilotErrorCode": 0,
[2025-07-27 15:30:07]     "pilotErrorDiag": "",
[2025-07-27 15:30:07]  *** Listing of results directory ***
[2025-07-27 15:30:07] total 351960
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 06:53 pilot3.tar.gz
[2025-07-27 15:30:07] -rwx------. 1 boincer umatlas     36292 Jul 27 06:57 runpilot2-wrapper.sh
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 06:57 queuedata.json
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas       100 Jul 27 14:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:30:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 14:07 run_atlas
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas       105 Jul 27 14:07 job.xml
[2025-07-27 15:30:07] -rw-r--r--. 2 boincer umatlas 145419195 Jul 27 14:07 EVNT.45743347._002629.pool.root.1
[2025-07-27 15:30:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:07 start_atlas.sh
[2025-07-27 15:30:07] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 14:07 shared
[2025-07-27 15:30:07] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 14:07 input.tar.gz
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas         0 Jul 27 14:07 boinc_lockfile
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 14:07 pandaJob.out
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas    980117 Jul 27 14:07 agis_schedconf.cvmfs.json
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas   1593052 Jul 27 14:07 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:30:07] drwx------. 4 boincer umatlas      4096 Jul 27 14:07 pilot3
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 15:19 init_data.xml
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas 209408038 Jul 27 15:28 HITS.45743349._047319.pool.root.1
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas       529 Jul 27 15:29 boinc_task_state.xml
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas        95 Jul 27 15:29 pilot_heartbeat.json
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas      1038 Jul 27 15:29 memory_monitor_summary.json
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas    366465 Jul 27 15:29 log.45743349._047319.job.log.tgz.1
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas      7824 Jul 27 15:29 heartbeat.json
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas        27 Jul 27 15:29 wrapper_checkpoint.txt
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 15:29 boinc_mmap_file
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas      4552 Jul 27 15:30 pilotlog.txt
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas    483273 Jul 27 15:30 log.45743349._047319.job.log.1
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas       357 Jul 27 15:30 output.list
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas       620 Jul 27 15:30 runtime_log
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas    870400 Jul 27 15:30 result.tar.gz
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 15:30 runtime_log.err
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas       654 Jul 27 15:30 DgsNDmHFE07n9Rq4apOajLDm4fhM0noT9bVof3QYDmdR2KDmUceMFo.diag
[2025-07-27 15:30:07] -rw-r--r--. 1 boincer umatlas     21749 Jul 27 15:30 stderr.txt
[2025-07-27 15:30:07] HITS file was successfully produced:
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas 209408038 Jul 27 15:28 shared/HITS.pool.root.1
[2025-07-27 15:30:07]  *** Contents of shared directory: ***
[2025-07-27 15:30:07] total 347920
[2025-07-27 15:30:07] -rw-r--r--. 2 boincer umatlas 145419195 Jul 27 14:07 ATLAS.root_0
[2025-07-27 15:30:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:07 start_atlas.sh
[2025-07-27 15:30:07] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 14:07 input.tar.gz
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas 209408038 Jul 27 15:28 HITS.pool.root.1
[2025-07-27 15:30:07] -rw-------. 1 boincer umatlas    870400 Jul 27 15:30 result.tar.gz
15:30:09 (271807): run_atlas exited; CPU time 50155.460094
15:30:09 (271807): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN