Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:59:23 (5261): wrapper (7.7.26015): starting
05:59:23 (5261): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 05:59:23] Arguments: --nthreads 8
[2025-07-28 05:59:23] Threads: 8
[2025-07-28 05:59:23] Checking for CVMFS
[2025-07-28 05:59:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 05:59:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 05:59:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 05:59:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 05:59:24] 2.11.2.0 28846 110625 138304 148834 2 109 21086741 25165825 4353 130560 0 85477361 99.881 48554975 5185 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 05:59:24] CVMFS is ok
[2025-07-28 05:59:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 05:59:24] Checking for apptainer binary...
[2025-07-28 05:59:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 05:59:24] Running /usr/bin/apptainer --version
[2025-07-28 05:59:24] apptainer version 1.3.2-1.el7
[2025-07-28 05:59:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 05:59:25] cg-vwn318.simple-grid.lan
[2025-07-28 05:59:25] apptainer works
[2025-07-28 05:59:25] Set ATHENA_PROC_NUMBER=8
[2025-07-28 05:59:25] Set ATHENA_CORE_NUMBER=8
[2025-07-28 05:59:25] Starting ATLAS job with PandaID=6747375716
[2025-07-28 05:59:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 12:17:12]  *** The last 200 lines of the pilot log: ***
[2025-07-28 12:17:12] 2025-07-28 08:34:57,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 12:17:12] 2025-07-28 08:34:57,128 | INFO     | fitting pss+swap vs Time
[2025-07-28 12:17:12] 2025-07-28 08:34:57,129 | INFO     | sum of square deviations: 6035722470.0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,132 | INFO     | sum of deviations: 23267104889.0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,132 | INFO     | mean x: 1753683412.0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,132 | INFO     | mean y: 2457232.907063197
[2025-07-28 12:17:12] 2025-07-28 08:34:57,133 | INFO     | -- intersect: -6757816469.522367
[2025-07-28 12:17:12] 2025-07-28 08:34:57,133 | INFO     | intersect: -6757816469.522367
[2025-07-28 12:17:12] 2025-07-28 08:34:57,133 | INFO     | chi2: 3.128501491109818
[2025-07-28 12:17:12] 2025-07-28 08:34:57,134 | INFO     | sum of square deviations: 5705372090.0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,137 | INFO     | sum of deviations: 58834165872.5
[2025-07-28 12:17:12] 2025-07-28 08:34:57,137 | INFO     | mean x: 1753683259.5
[2025-07-28 12:17:12] 2025-07-28 08:34:57,137 | INFO     | mean y: 2473463.5492424243
[2025-07-28 12:17:12] 2025-07-28 08:34:57,137 | INFO     | -- intersect: -18081621692.67911
[2025-07-28 12:17:12] 2025-07-28 08:34:57,137 | INFO     | intersect: -18081621692.67911
[2025-07-28 12:17:12] 2025-07-28 08:34:57,138 | INFO     | chi2: 1.4805083181527674
[2025-07-28 12:17:12] 2025-07-28 08:34:57,138 | INFO     | current chi2=1.4805083181527674 (change=52.676758430197665 %)
[2025-07-28 12:17:12] 2025-07-28 08:34:57,139 | INFO     | sum of square deviations: 5387301010.0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,141 | INFO     | sum of deviations: 57461123369.00001
[2025-07-28 12:17:12] 2025-07-28 08:34:57,141 | INFO     | mean x: 1753683107.0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,141 | INFO     | mean y: 2472805.1776061775
[2025-07-28 12:17:12] 2025-07-28 08:34:57,142 | INFO     | -- intersect: -18702366811.990593
[2025-07-28 12:17:12] 2025-07-28 08:34:57,142 | INFO     | intersect: -18702366811.990593
[2025-07-28 12:17:12] 2025-07-28 08:34:57,142 | INFO     | chi2: 1.4806029751053789
[2025-07-28 12:17:12] 2025-07-28 08:34:57,142 | INFO     | current chi2=1.4806029751053789 (change=-0.006393544126085295 %)
[2025-07-28 12:17:12] 2025-07-28 08:34:57,142 | INFO     | right removable region: 258
[2025-07-28 12:17:12] 2025-07-28 08:34:57,143 | INFO     | sum of square deviations: 5705372090.0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,145 | INFO     | sum of deviations: -19807765639.500004
[2025-07-28 12:17:12] 2025-07-28 08:34:57,146 | INFO     | mean x: 1753683564.5
[2025-07-28 12:17:12] 2025-07-28 08:34:57,146 | INFO     | mean y: 2476967.784090909
[2025-07-28 12:17:12] 2025-07-28 08:34:57,146 | INFO     | -- intersect: 6090870941.657053
[2025-07-28 12:17:12] 2025-07-28 08:34:57,146 | INFO     | intersect: 6090870941.657053
[2025-07-28 12:17:12] 2025-07-28 08:34:57,146 | INFO     | chi2: 1.6940069502665236
[2025-07-28 12:17:12] 2025-07-28 08:34:57,146 | INFO     | current chi2=1.6940069502665236 (change=45.852448685725754 %)
[2025-07-28 12:17:12] 2025-07-28 08:34:57,147 | INFO     | sum of square deviations: 5387301010.0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,149 | INFO     | sum of deviations: -20339728431.0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,149 | INFO     | mean x: 1753683717.0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,149 | INFO     | mean y: 2477216.525096525
[2025-07-28 12:17:12] 2025-07-28 08:34:57,150 | INFO     | -- intersect: 6623501453.232201
[2025-07-28 12:17:12] 2025-07-28 08:34:57,150 | INFO     | intersect: 6623501453.232201
[2025-07-28 12:17:12] 2025-07-28 08:34:57,150 | INFO     | chi2: 1.684792560326652
[2025-07-28 12:17:12] 2025-07-28 08:34:57,150 | INFO     | current chi2=1.684792560326652 (change=0.54394050381091 %)
[2025-07-28 12:17:12] 2025-07-28 08:34:57,151 | INFO     | left removable region: 20
[2025-07-28 12:17:12] 2025-07-28 08:34:57,151 | INFO     | sum of square deviations: 4180243959.5
[2025-07-28 12:17:12] 2025-07-28 08:34:57,153 | INFO     | sum of deviations: 9410209804.499998
[2025-07-28 12:17:12] 2025-07-28 08:34:57,153 | INFO     | mean x: 1753683686.5
[2025-07-28 12:17:12] 2025-07-28 08:34:57,153 | INFO     | mean y: 2496757.5420168065
[2025-07-28 12:17:12] 2025-07-28 08:34:57,153 | INFO     | -- intersect: -3945246862.346587
[2025-07-28 12:17:12] 2025-07-28 08:34:57,153 | INFO     | intersect: -3945246862.346587
[2025-07-28 12:17:12] 2025-07-28 08:34:57,153 | INFO     | chi2: 0.0016265268895779338
[2025-07-28 12:17:12] 2025-07-28 08:34:57,154 | INFO     | -- intersect: -3945246862.346587
[2025-07-28 12:17:12] 2025-07-28 08:34:57,154 | INFO     | current memory leak: 2.25 B/s (using 238 data points, chi2=0.00)
[2025-07-28 12:17:12] 2025-07-28 08:34:57,154 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-28 12:17:12] 2025-07-28 08:34:57,155 | INFO     | ..............................
[2025-07-28 12:17:12] 2025-07-28 08:34:57,155 | INFO     | . Timing measurements:
[2025-07-28 12:17:12] 2025-07-28 08:34:57,155 | INFO     | . get job = 0 s
[2025-07-28 12:17:12] 2025-07-28 08:34:57,155 | INFO     | . initial setup = 2 s
[2025-07-28 12:17:12] 2025-07-28 08:34:57,155 | INFO     | . payload setup = 11 s
[2025-07-28 12:17:12] 2025-07-28 08:34:57,155 | INFO     | . stage-in = 0 s
[2025-07-28 12:17:12] 2025-07-28 08:34:57,155 | INFO     | . payload execution = 16374 s
[2025-07-28 12:17:12] 2025-07-28 08:34:57,155 | INFO     | . stage-out = 4 s
[2025-07-28 12:17:12] 2025-07-28 08:34:57,155 | INFO     | . log creation = 0 s
[2025-07-28 12:17:12] 2025-07-28 08:34:57,156 | INFO     | ..............................
[2025-07-28 12:17:12] 2025-07-28 08:34:57,302 | INFO     | 
[2025-07-28 12:17:12] 2025-07-28 08:34:57,302 | INFO     | job summary report
[2025-07-28 12:17:12] 2025-07-28 08:34:57,302 | INFO     | --------------------------------------------------
[2025-07-28 12:17:12] 2025-07-28 08:34:57,302 | INFO     | PanDA job id: 6747375716
[2025-07-28 12:17:12] 2025-07-28 08:34:57,302 | INFO     | task id: 45743349
[2025-07-28 12:17:12] 2025-07-28 08:34:57,302 | INFO     | errors: (none)
[2025-07-28 12:17:12] 2025-07-28 08:34:57,302 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 12:17:12] 2025-07-28 08:34:57,302 | INFO     | pilot state: finished 
[2025-07-28 12:17:12] 2025-07-28 08:34:57,303 | INFO     | transexitcode: 0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,303 | INFO     | exeerrorcode: 0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,303 | INFO     | exeerrordiag: 
[2025-07-28 12:17:12] 2025-07-28 08:34:57,303 | INFO     | exitcode: 0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,303 | INFO     | exitmsg: OK
[2025-07-28 12:17:12] 2025-07-28 08:34:57,303 | INFO     | cpuconsumptiontime: 61921 s
[2025-07-28 12:17:12] 2025-07-28 08:34:57,303 | INFO     | nevents: 400
[2025-07-28 12:17:12] 2025-07-28 08:34:57,303 | INFO     | neventsw: 0
[2025-07-28 12:17:12] 2025-07-28 08:34:57,303 | INFO     | pid: 15849
[2025-07-28 12:17:12] 2025-07-28 08:34:57,303 | INFO     | pgrp: 15849
[2025-07-28 12:17:12] 2025-07-28 08:34:57,304 | INFO     | corecount: 8
[2025-07-28 12:17:12] 2025-07-28 08:34:57,304 | INFO     | event service: False
[2025-07-28 12:17:12] 2025-07-28 08:34:57,304 | INFO     | sizes: {0: 2397476, 1: 2397476, 8: 2397766, 12: 2397794, 16390: 2428968, 16395: 2437968, 16397: 2438152, 16490: 2438346}
[2025-07-28 12:17:12] 2025-07-28 08:34:57,304 | INFO     | --------------------------------------------------
[2025-07-28 12:17:12] 2025-07-28 08:34:57,304 | INFO     | 
[2025-07-28 12:17:12] 2025-07-28 08:34:57,304 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-07-28 12:17:12] 2025-07-28 08:34:57,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,779 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,779 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,779 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,780 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,780 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,780 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,780 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,781 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,781 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 12:17:12] 2025-07-28 08:34:57,781 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,781 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 12:17:12] 2025-07-28 08:34:57,781 | INFO     | job 6747375716 has completed (purged errors)
[2025-07-28 12:17:12] 2025-07-28 08:34:57,781 | INFO     | overall cleanup function is called
[2025-07-28 12:17:12] 2025-07-28 08:34:58,791 | INFO     | --- collectZombieJob: --- 10, [15849]
[2025-07-28 12:17:12] 2025-07-28 08:34:58,791 | INFO     | zombie collector waiting for pid 15849
[2025-07-28 12:17:12] 2025-07-28 08:34:58,791 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 12:17:12] 2025-07-28 08:34:58,791 | INFO     | collected zombie processes
[2025-07-28 12:17:12] 2025-07-28 08:34:58,791 | INFO     | will attempt to kill all subprocesses of pid=15849
[2025-07-28 12:17:12] 2025-07-28 08:34:58,924 | INFO     | process IDs to be killed: [15849] (in reverse order)
[2025-07-28 12:17:12] 2025-07-28 08:35:00,045 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 12:17:12] 2025-07-28 08:35:00,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 12:17:12] 2025-07-28 08:35:00,049 | INFO     | did not find any defunct processes belonging to 15849
[2025-07-28 12:17:12] 2025-07-28 08:35:00,052 | INFO     | did not find any defunct processes belonging to 15849
[2025-07-28 12:17:12] 2025-07-28 08:35:00,052 | INFO     | ready for new job
[2025-07-28 12:17:12] 2025-07-28 08:35:00,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 12:17:12] 2025-07-28 08:35:00,054 | INFO     | ***************************************
[2025-07-28 12:17:12] 2025-07-28 08:35:00,054 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 12:17:12] 2025-07-28 08:35:00,055 | INFO     | ***************************************
[2025-07-28 12:17:12] 2025-07-28 08:35:00,055 | INFO     | 
[2025-07-28 12:17:12] 2025-07-28 08:35:00,055 | INFO     | pilot is running in a VM
[2025-07-28 12:17:12] 2025-07-28 08:35:00,055 | INFO     | architecture information:
[2025-07-28 12:17:12] 2025-07-28 08:35:00,078 | INFO     | executing command: cat /etc/os-release
[2025-07-28 12:17:12] 2025-07-28 08:35:00,369 | INFO     | cat /etc/os-release:
[2025-07-28 12:17:12] NAME="CentOS Linux"
[2025-07-28 12:17:12] VERSION="7 (Core)"
[2025-07-28 12:17:12] ID="centos"
[2025-07-28 12:17:12] ID_LIKE="rhel fedora"
[2025-07-28 12:17:12] VERSION_ID="7"
[2025-07-28 12:17:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 12:17:12] ANSI_COLOR="0;31"
[2025-07-28 12:17:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 12:17:12] HOME_URL="https://www.centos.org/"
[2025-07-28 12:17:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 12:17:12] 
[2025-07-28 12:17:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 12:17:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 12:17:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 12:17:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 12:17:12] 
[2025-07-28 12:17:12] 2025-07-28 08:35:00,370 | INFO     | ***************************************
[2025-07-28 12:17:12] 2025-07-28 08:35:00,873 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-07-28 12:17:12] 2025-07-28 08:35:01,167 | INFO     | sufficient remaining disk space (497215864832 B)
[2025-07-28 12:17:12] 2025-07-28 08:35:01,167 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 12:17:12] 2025-07-28 08:35:01,167 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 12:17:12] 2025-07-28 08:35:01,167 | INFO     | update_server=False
[2025-07-28 12:17:12] 2025-07-28 08:35:01,167 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 12:17:12] 2025-07-28 08:35:01,529 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 12:17:12] 2025-07-28 08:35:01,529 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 12:17:12] 2025-07-28 08:35:01,529 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:17:12] 2025-07-28 08:35:01,529 | INFO     | will abort loop
[2025-07-28 12:17:12] 2025-07-28 08:35:01,716 | INFO     | all payload control threads have been joined
[2025-07-28 12:17:12] 2025-07-28 08:35:02,174 | INFO     | [job] retrieve thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:02,204 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:02,260 | INFO     | all data control threads have been joined
[2025-07-28 12:17:12] 2025-07-28 08:35:02,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:17:12] 2025-07-28 08:35:02,356 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:02,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 12:17:12] 2025-07-28 08:35:02,501 | INFO     | [payload] failed_post thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:02,535 | INFO     | [job] job monitor thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:02,612 | INFO     | all job control threads have been joined
[2025-07-28 12:17:12] 2025-07-28 08:35:02,641 | INFO     | [payload] validate_post thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:02,722 | INFO     | [payload] control thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:02,753 | INFO     | [job] validate thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:03,162 | INFO     | [data] copytool_in thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:03,266 | INFO     | [data] control thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:03,323 | INFO     | [job] queue monitor thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:03,352 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:03,519 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:03,617 | INFO     | [job] control thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:04,436 | INFO     | [data] copytool_out thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:04,599 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 12:17:12] 2025-07-28 08:35:08,609 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 12:17:12] 2025-07-28 08:35:09,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730410899264)>', '<ExcThread(monitor, started 139729815189248)>']
[2025-07-28 12:17:12] 2025-07-28 08:35:14,261 | INFO     | all workflow threads have been joined
[2025-07-28 12:17:12] 2025-07-28 08:35:14,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 12:17:12] 2025-07-28 08:35:14,261 | INFO     | traces error code: 0
[2025-07-28 12:17:12] 2025-07-28 08:35:14,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 12:17:12] 2025-07-28 08:35:29,718 | INFO     | PID=9316 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-28 12:17:12] 2025-07-28 08:35:29,719 | INFO     | .. there are 9 such processes running
[2025-07-28 12:17:12] 2025-07-28 08:35:29,720 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 12:17:12] 2025-07-28 08:35:29,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 12:17:12] 2025-07-28 08:35:29,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 12:17:12] 2025-07-28 08:35:29,720 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 12:17:12] 2025-07-28 08:35:29,720 | INFO     | [monitor] control thread has ended
[2025-07-28 12:17:12] 2025-07-28 08:35:29,998 [wrapper] ==== pilot stdout END ====
[2025-07-28 12:17:12] 2025-07-28 08:35:30,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 12:17:12] 2025-07-28 08:35:30,067 [wrapper] pilotpid: 9316
[2025-07-28 12:17:12] 2025-07-28 08:35:30,173 [wrapper] Pilot exit status: 0
[2025-07-28 12:17:12] 2025-07-28 08:35:30,731 [wrapper] pandaids: 6747375716
[2025-07-28 12:17:12] 2025-07-28 08:35:31,724 [wrapper] cleanup supervisor_pilot 30274 9317
[2025-07-28 12:17:12] 2025-07-28 08:35:31,846 [wrapper] Test setup, not cleaning
[2025-07-28 12:17:12] 2025-07-28 08:35:31,931 [wrapper] apfmon messages muted
[2025-07-28 12:17:12] 2025-07-28 08:35:31,971 [wrapper] ==== wrapper stdout END ====
[2025-07-28 12:17:12] 2025-07-28 08:35:32,016 [wrapper] ==== wrapper stderr END ====
[2025-07-28 12:17:12]  *** Error codes and diagnostics ***
[2025-07-28 12:17:12]     "exeErrorCode": 0,
[2025-07-28 12:17:12]     "exeErrorDiag": "",
[2025-07-28 12:17:12]     "pilotErrorCode": 0,
[2025-07-28 12:17:12]     "pilotErrorDiag": "",
[2025-07-28 12:17:12]  *** Listing of results directory ***
[2025-07-28 12:17:12] total 352712
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc    530466 Jul 27 12:10 pilot3.tar.gz
[2025-07-28 12:17:12] -rwx------. 1 boinc boinc     36292 Jul 27 12:33 runpilot2-wrapper.sh
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc      5112 Jul 27 12:33 queuedata.json
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc       100 Jul 28 05:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 12:17:12] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 05:59 run_atlas
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc       105 Jul 28 05:59 job.xml
[2025-07-28 12:17:12] -rw-r--r--. 2 boinc boinc 146439366 Jul 28 05:59 EVNT.45743347._002606.pool.root.1
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc      6392 Jul 28 05:59 init_data.xml
[2025-07-28 12:17:12] -rw-r--r--. 2 boinc boinc     15095 Jul 28 05:59 start_atlas.sh
[2025-07-28 12:17:12] drwxrwx--x. 2 boinc boinc        68 Jul 28 05:59 shared
[2025-07-28 12:17:12] -rw-r--r--. 2 boinc boinc    542890 Jul 28 05:59 input.tar.gz
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc         0 Jul 28 05:59 boinc_lockfile
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc      2563 Jul 28 05:59 pandaJob.out
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc    980117 Jul 28 05:59 agis_schedconf.cvmfs.json
[2025-07-28 12:17:12] drwx------. 4 boinc boinc      4096 Jul 28 05:59 pilot3
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc 207188346 Jul 28 10:31 HITS.45743349._046958.pool.root.1
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc       531 Jul 28 10:32 boinc_task_state.xml
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc      1020 Jul 28 10:33 memory_monitor_summary.json
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc   1593052 Jul 28 10:33 agis_ddmendpoints.agis.ALL.json
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc    409147 Jul 28 10:33 log.45743349._046958.job.log.tgz.1
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc      7775 Jul 28 10:34 heartbeat.json
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc        95 Jul 28 10:35 pilot_heartbeat.json
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc       819 Jul 28 10:35 pilotlog.txt
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc   1434694 Jul 28 10:35 log.45743349._046958.job.log.1
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc       357 Jul 28 10:35 output.list
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc       620 Jul 28 10:35 runtime_log
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc   1863680 Jul 28 10:35 result.tar.gz
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc       657 Jul 28 10:35 uyZMDmHsD07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmF2ULDmcJnvVn.diag
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc      8674 Jul 28 10:35 runtime_log.err
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc      8192 Jul 28 12:17 boinc_mmap_file
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc        28 Jul 28 12:17 wrapper_checkpoint.txt
[2025-07-28 12:17:12] -rw-r--r--. 1 boinc boinc     20601 Jul 28 12:17 stderr.txt
[2025-07-28 12:17:12] HITS file was successfully produced:
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc 207188346 Jul 28 10:31 shared/HITS.pool.root.1
[2025-07-28 12:17:12]  *** Contents of shared directory: ***
[2025-07-28 12:17:12] total 347712
[2025-07-28 12:17:12] -rw-r--r--. 2 boinc boinc 146439366 Jul 28 05:59 ATLAS.root_0
[2025-07-28 12:17:12] -rw-r--r--. 2 boinc boinc     15095 Jul 28 05:59 start_atlas.sh
[2025-07-28 12:17:12] -rw-r--r--. 2 boinc boinc    542890 Jul 28 05:59 input.tar.gz
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc 207188346 Jul 28 10:31 HITS.pool.root.1
[2025-07-28 12:17:12] -rw-------. 1 boinc boinc   1863680 Jul 28 10:35 result.tar.gz
12:17:14 (5261): run_atlas exited; CPU time 62137.543563
12:17:14 (5261): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN