Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:18:37 (1628757): wrapper (7.7.26015): starting
06:18:37 (1628757): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 06:18:37] Arguments: --nthreads 3
[2025-07-28 06:18:37] Threads: 3
[2025-07-28 06:18:37] Checking for CVMFS
[2025-07-28 06:18:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 06:18:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 06:18:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 06:18:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 06:18:37] 2.9.2.0 3414332 9082 86828 148836 1 56 29857283 36864001 0 130560 0 6143075 99.989 334340 1954 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 06:18:37] CVMFS is ok
[2025-07-28 06:18:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 06:18:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 06:18:37] Further information can be found at the LHC@home message board.
[2025-07-28 06:18:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 06:18:37] Checking for apptainer binary...
[2025-07-28 06:18:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 06:18:37] Running /usr/bin/apptainer --version
[2025-07-28 06:18:37] apptainer version 1.3.6-4.2
[2025-07-28 06:18:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 06:18:37] thA371b
[2025-07-28 06:18:37] apptainer works
[2025-07-28 06:18:37] Set ATHENA_PROC_NUMBER=3
[2025-07-28 06:18:37] Set ATHENA_CORE_NUMBER=3
[2025-07-28 06:18:37] Starting ATLAS job with PandaID=6747376233
[2025-07-28 06:18:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 07:52:32]  *** The last 200 lines of the pilot log: ***
[2025-07-28 07:52:32]  is_tar=False
[2025-07-28 07:52:32]  lfn=log.45743349._047468.job.log.tgz.1
[2025-07-28 07:52:32]  mtime=0
[2025-07-28 07:52:32]  protocol_id=None
[2025-07-28 07:52:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 07:52:32]  replicas=None
[2025-07-28 07:52:32]  scope=mc23_13p6TeV
[2025-07-28 07:52:32]  status=None
[2025-07-28 07:52:32]  status_code=0
[2025-07-28 07:52:32]  storage_token=
[2025-07-28 07:52:32]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747376233/log.45743349._047468.job.log.tgz.1
[2025-07-28 07:52:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/29/log.45743349._047468.job.log.tgz.1
[2025-07-28 07:52:32]  workdir=None
[2025-07-28 07:52:32] ]
[2025-07-28 07:52:32] 2025-07-28 05:51:56,586 | INFO     | transferring file log.45743349._047468.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747376233/log.45743349._047468.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 07:52:32] 2025-07-28 05:51:56,586 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747376233/log.45743349._047468.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0474
[2025-07-28 07:52:32] 2025-07-28 05:51:56,598 | INFO     | adding to output.list: log.45743349._047468.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/29/log.45743349._047468.job.log.tg
[2025-07-28 07:52:32] 2025-07-28 05:51:56,599 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 07:52:32] 2025-07-28 05:51:56,599 | INFO     | summary of transferred files:
[2025-07-28 07:52:32] 2025-07-28 05:51:56,599 | INFO     |  -- lfn=log.45743349._047468.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 07:52:32] 2025-07-28 05:51:56,599 | INFO     | stage-out finished correctly
[2025-07-28 07:52:32] 2025-07-28 05:51:56,785 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 07:52:32] 2025-07-28 05:51:58,831 | INFO     | job 6747376233 has state=finished
[2025-07-28 07:52:32] 2025-07-28 05:51:58,831 | INFO     | preparing for final server update for job 6747376233 in state='finished'
[2025-07-28 07:52:32] 2025-07-28 05:51:58,831 | INFO     | this job has now completed (state=finished)
[2025-07-28 07:52:32] 2025-07-28 05:51:58,831 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 07:52:32] 2025-07-28 05:51:58,831 | INFO     | log transfer has been attempted: DONE
[2025-07-28 07:52:32] 2025-07-28 05:51:58,831 | INFO     | job 6747376233 has finished - writing final server update
[2025-07-28 07:52:32] 2025-07-28 05:51:58,831 | INFO     | total number of processed events: 400 (read)
[2025-07-28 07:52:32] 2025-07-28 05:51:58,832 | INFO     | executing command: lscpu
[2025-07-28 07:52:32] 2025-07-28 05:51:58,844 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 07:52:32] 2025-07-28 05:52:01,021 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 07:52:32] 2025-07-28 05:52:01,022 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4062.9043333333334
[2025-07-28 07:52:32] 2025-07-28 05:52:01,023 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747376233/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 07:52:32] 2025-07-28 05:52:01,023 | INFO     | extracted standard info from prmon json
[2025-07-28 07:52:32] 2025-07-28 05:52:01,023 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 07:52:32] 2025-07-28 05:52:01,023 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 07:52:32] 2025-07-28 05:52:01,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 07:52:32] 2025-07-28 05:52:01,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 07:52:32] 2025-07-28 05:52:01,024 | INFO     | fitting pss+swap vs Time
[2025-07-28 07:52:32] 2025-07-28 05:52:01,024 | INFO     | sum of square deviations: 190403570.0
[2025-07-28 07:52:32] 2025-07-28 05:52:01,024 | INFO     | sum of deviations: -14056601001.999998
[2025-07-28 07:52:32] 2025-07-28 05:52:01,024 | INFO     | mean x: 1753679209.0
[2025-07-28 07:52:32] 2025-07-28 05:52:01,024 | INFO     | mean y: 2506457.094117647
[2025-07-28 07:52:32] 2025-07-28 05:52:01,024 | INFO     | -- intersect: 129468403164.89201
[2025-07-28 07:52:32] 2025-07-28 05:52:01,024 | INFO     | intersect: 129468403164.89201
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | chi2: 0.0522464540337078
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | -- intersect: 129468403164.89201
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | current memory leak: -73.83 B/s (using 85 data points, chi2=0.05)
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | could have reported an average CPU frequency of 4030 MHz (7 samples)
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | ..............................
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | . Timing measurements:
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | . get job = 0 s
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | . initial setup = 1 s
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | . payload setup = 3 s
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | . stage-in = 0 s
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | . payload execution = 5573 s
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | . stage-out = 0 s
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | . log creation = 0 s
[2025-07-28 07:52:32] 2025-07-28 05:52:01,025 | INFO     | ..............................
[2025-07-28 07:52:32] 2025-07-28 05:52:01,055 | INFO     | 
[2025-07-28 07:52:32] 2025-07-28 05:52:01,055 | INFO     | job summary report
[2025-07-28 07:52:32] 2025-07-28 05:52:01,055 | INFO     | --------------------------------------------------
[2025-07-28 07:52:32] 2025-07-28 05:52:01,055 | INFO     | PanDA job id: 6747376233
[2025-07-28 07:52:32] 2025-07-28 05:52:01,055 | INFO     | task id: 45743349
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | errors: (none)
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | pilot state: finished 
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | transexitcode: 0
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | exeerrorcode: 0
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | exeerrordiag: 
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | exitcode: 0
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | exitmsg: OK
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | cpuconsumptiontime: 16118 s
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | nevents: 400
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | neventsw: 0
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | pid: 1638893
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | pgrp: 1638893
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | corecount: 3
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | event service: False
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | sizes: {0: 2397477, 2: 2397739, 11: 2397767, 5580: 2424554, 5581: 2433613, 5585: 2433751}
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | --------------------------------------------------
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | 
[2025-07-28 07:52:32] 2025-07-28 05:52:01,056 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 07:52:32] 2025-07-28 05:52:01,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,067 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,067 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,068 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 07:52:32] 2025-07-28 05:52:01,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,068 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 07:52:32] 2025-07-28 05:52:01,068 | INFO     | job 6747376233 has completed (purged errors)
[2025-07-28 07:52:32] 2025-07-28 05:52:01,068 | INFO     | overall cleanup function is called
[2025-07-28 07:52:32] 2025-07-28 05:52:02,074 | INFO     | --- collectZombieJob: --- 10, [1638893]
[2025-07-28 07:52:32] 2025-07-28 05:52:02,074 | INFO     | zombie collector waiting for pid 1638893
[2025-07-28 07:52:32] 2025-07-28 05:52:02,074 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 07:52:32] 2025-07-28 05:52:02,074 | INFO     | collected zombie processes
[2025-07-28 07:52:32] 2025-07-28 05:52:02,074 | INFO     | will attempt to kill all subprocesses of pid=1638893
[2025-07-28 07:52:32] 2025-07-28 05:52:02,121 | INFO     | process IDs to be killed: [1638893] (in reverse order)
[2025-07-28 07:52:32] 2025-07-28 05:52:02,146 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 07:52:32] 2025-07-28 05:52:02,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 07:52:32] 2025-07-28 05:52:02,149 | INFO     | did not find any defunct processes belonging to 1638893
[2025-07-28 07:52:32] 2025-07-28 05:52:02,152 | INFO     | did not find any defunct processes belonging to 1638893
[2025-07-28 07:52:32] 2025-07-28 05:52:02,152 | INFO     | ready for new job
[2025-07-28 07:52:32] 2025-07-28 05:52:02,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 07:52:32] 2025-07-28 05:52:02,152 | INFO     | ***************************************
[2025-07-28 07:52:32] 2025-07-28 05:52:02,152 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 07:52:32] 2025-07-28 05:52:02,153 | INFO     | ***************************************
[2025-07-28 07:52:32] 2025-07-28 05:52:02,153 | INFO     | 
[2025-07-28 07:52:32] 2025-07-28 05:52:02,153 | INFO     | architecture information:
[2025-07-28 07:52:32] 2025-07-28 05:52:02,153 | INFO     | executing command: cat /etc/os-release
[2025-07-28 07:52:32] 2025-07-28 05:52:02,162 | INFO     | cat /etc/os-release:
[2025-07-28 07:52:32] NAME="CentOS Linux"
[2025-07-28 07:52:32] VERSION="7 (Core)"
[2025-07-28 07:52:32] ID="centos"
[2025-07-28 07:52:32] ID_LIKE="rhel fedora"
[2025-07-28 07:52:32] VERSION_ID="7"
[2025-07-28 07:52:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 07:52:32] ANSI_COLOR="0;31"
[2025-07-28 07:52:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 07:52:32] HOME_URL="https://www.centos.org/"
[2025-07-28 07:52:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 07:52:32] 
[2025-07-28 07:52:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 07:52:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 07:52:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 07:52:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 07:52:32] 
[2025-07-28 07:52:32] 2025-07-28 05:52:02,163 | INFO     | ***************************************
[2025-07-28 07:52:32] 2025-07-28 05:52:02,185 | WARNING  | process 1638893 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 07:52:32] 2025-07-28 05:52:02,220 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 07:52:32] 2025-07-28 05:52:02,264 | INFO     | number of running child processes to parent process 1638893: 1
[2025-07-28 07:52:32] 2025-07-28 05:52:02,264 | INFO     | maximum number of monitored processes: 6
[2025-07-28 07:52:32] 2025-07-28 05:52:02,264 | INFO     | aborting job monitoring since job object (job id=6747376233) has expired
[2025-07-28 07:52:32] 2025-07-28 05:52:02,666 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 07:52:32] 2025-07-28 05:52:02,675 | INFO     | sufficient remaining disk space (230185500672 B)
[2025-07-28 07:52:32] 2025-07-28 05:52:02,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 07:52:32] 2025-07-28 05:52:02,676 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 07:52:32] 2025-07-28 05:52:02,676 | INFO     | update_server=False
[2025-07-28 07:52:32] 2025-07-28 05:52:02,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 07:52:32] 2025-07-28 05:52:02,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 07:52:32] 2025-07-28 05:52:02,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 07:52:32] 2025-07-28 05:52:02,676 | INFO     | will abort loop
[2025-07-28 07:52:32] 2025-07-28 05:52:02,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 07:52:32] 2025-07-28 05:52:02,795 | INFO     | all payload control threads have been joined
[2025-07-28 07:52:32] 2025-07-28 05:52:02,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 07:52:32] 2025-07-28 05:52:03,522 | INFO     | all job control threads have been joined
[2025-07-28 07:52:32] 2025-07-28 05:52:03,593 | INFO     | all data control threads have been joined
[2025-07-28 07:52:32] 2025-07-28 05:52:03,681 | INFO     | [job] job monitor thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:03,681 | INFO     | [job] queue monitor thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:03,681 | INFO     | [job] retrieve thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:03,800 | INFO     | [payload] control thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:04,161 | INFO     | [job] validate thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:04,184 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:04,221 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:04,472 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:04,527 | INFO     | [job] control thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:04,598 | INFO     | [data] control thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:04,681 | INFO     | [data] copytool_out thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:04,697 | INFO     | [payload] failed_post thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:04,982 | INFO     | [data] copytool_in thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:05,221 | INFO     | [payload] validate_post thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:06,824 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:12,989 | INFO     | job.realtimelogging is not enabled
[2025-07-28 07:52:32] 2025-07-28 05:52:13,994 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 07:52:32] 2025-07-28 05:52:15,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139776932173632)>', '<ExcThread(monitor, started 139776573282048)>']
[2025-07-28 07:52:32] 2025-07-28 05:52:20,984 | INFO     | all workflow threads have been joined
[2025-07-28 07:52:32] 2025-07-28 05:52:20,984 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 07:52:32] 2025-07-28 05:52:20,984 | INFO     | traces error code: 0
[2025-07-28 07:52:32] 2025-07-28 05:52:20,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 07:52:32] 2025-07-28 05:52:32,342 | INFO     | PID=1632400 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 07:52:32] 2025-07-28 05:52:32,342 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 07:52:32] 2025-07-28 05:52:32,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 07:52:32] 2025-07-28 05:52:32,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 07:52:32] 2025-07-28 05:52:32,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 07:52:32] 2025-07-28 05:52:32,343 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 07:52:32] 2025-07-28 05:52:32,343 | INFO     | [monitor] control thread has ended
[2025-07-28 07:52:32] 2025-07-28 05:52:32,390 [wrapper] ==== pilot stdout END ====
[2025-07-28 07:52:32] 2025-07-28 05:52:32,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 07:52:32] 2025-07-28 05:52:32,394 [wrapper] pilotpid: 1632400
[2025-07-28 07:52:32] 2025-07-28 05:52:32,396 [wrapper] Pilot exit status: 0
[2025-07-28 07:52:32] 2025-07-28 05:52:32,404 [wrapper] pandaids: 6747376233
[2025-07-28 07:52:32] 2025-07-28 05:52:32,420 [wrapper] cleanup supervisor_pilot 1652012 1632401
[2025-07-28 07:52:32] 2025-07-28 05:52:32,423 [wrapper] Test setup, not cleaning
[2025-07-28 07:52:32] 2025-07-28 05:52:32,425 [wrapper] apfmon messages muted
[2025-07-28 07:52:32] 2025-07-28 05:52:32,428 [wrapper] ==== wrapper stdout END ====
[2025-07-28 07:52:32] 2025-07-28 05:52:32,430 [wrapper] ==== wrapper stderr END ====
[2025-07-28 07:52:32]  *** Error codes and diagnostics ***
[2025-07-28 07:52:32]     "exeErrorCode": 0,
[2025-07-28 07:52:32]     "exeErrorDiag": "",
[2025-07-28 07:52:32]     "pilotErrorCode": 0,
[2025-07-28 07:52:32]     "pilotErrorDiag": "",
[2025-07-28 07:52:32]  *** Listing of results directory ***
[2025-07-28 07:52:32] total 438080
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc    530466 Jul 27 12:53 pilot3.tar.gz
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc      5112 Jul 27 13:02 queuedata.json
[2025-07-28 07:52:32] -rwx------ 1 boinc boinc     36292 Jul 27 13:02 runpilot2-wrapper.sh
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc       100 Jul 28 06:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 07:52:32] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 06:18 run_atlas
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc       105 Jul 28 06:18 job.xml
[2025-07-28 07:52:32] -rw-r--r-- 2 boinc boinc 231341476 Jul 28 06:18 EVNT.45743347._002637.pool.root.1
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc      6921 Jul 28 06:18 init_data.xml
[2025-07-28 07:52:32] drwxrwx--x 2 boinc boinc      4096 Jul 28 06:18 shared
[2025-07-28 07:52:32] -rw-r--r-- 2 boinc boinc    542890 Jul 28 06:18 input.tar.gz
[2025-07-28 07:52:32] -rw-r--r-- 2 boinc boinc     15095 Jul 28 06:18 start_atlas.sh
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc         0 Jul 28 06:18 boinc_lockfile
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc      2562 Jul 28 06:18 pandaJob.out
[2025-07-28 07:52:32] -rw------- 1 boinc boinc    980125 Jul 28 06:18 agis_schedconf.cvmfs.json
[2025-07-28 07:52:32] -rw------- 1 boinc boinc   1593052 Jul 28 06:18 agis_ddmendpoints.agis.ALL.json
[2025-07-28 07:52:32] drwx------ 4 boinc boinc      4096 Jul 28 06:18 pilot3
[2025-07-28 07:52:32] -rw------- 1 boinc boinc 211805000 Jul 28 07:51 HITS.45743349._047468.pool.root.1
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc       529 Jul 28 07:51 boinc_task_state.xml
[2025-07-28 07:52:32] -rw------- 1 boinc boinc      1031 Jul 28 07:51 memory_monitor_summary.json
[2025-07-28 07:52:32] -rw------- 1 boinc boinc    245257 Jul 28 07:51 log.45743349._047468.job.log.tgz.1
[2025-07-28 07:52:32] -rw------- 1 boinc boinc      7761 Jul 28 07:52 heartbeat.json
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc      8192 Jul 28 07:52 boinc_mmap_file
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc        27 Jul 28 07:52 wrapper_checkpoint.txt
[2025-07-28 07:52:32] -rw------- 1 boinc boinc       817 Jul 28 07:52 pilotlog.txt
[2025-07-28 07:52:32] -rw------- 1 boinc boinc        95 Jul 28 07:52 pilot_heartbeat.json
[2025-07-28 07:52:32] -rw------- 1 boinc boinc    539627 Jul 28 07:52 log.45743349._047468.job.log.1
[2025-07-28 07:52:32] -rw------- 1 boinc boinc       357 Jul 28 07:52 output.list
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc       620 Jul 28 07:52 runtime_log
[2025-07-28 07:52:32] -rw------- 1 boinc boinc    808960 Jul 28 07:52 result.tar.gz
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc      8739 Jul 28 07:52 runtime_log.err
[2025-07-28 07:52:32] -rw------- 1 boinc boinc       660 Jul 28 07:52 pXULDmLKE07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmA6ULDm588PNo.diag
[2025-07-28 07:52:32] -rw-r--r-- 1 boinc boinc     21518 Jul 28 07:52 stderr.txt
[2025-07-28 07:52:32] HITS file was successfully produced:
[2025-07-28 07:52:32] -rw------- 1 boinc boinc 211805000 Jul 28 07:51 shared/HITS.pool.root.1
[2025-07-28 07:52:32]  *** Contents of shared directory: ***
[2025-07-28 07:52:32] total 434108
[2025-07-28 07:52:32] -rw-r--r-- 2 boinc boinc 231341476 Jul 28 06:18 ATLAS.root_0
[2025-07-28 07:52:32] -rw-r--r-- 2 boinc boinc    542890 Jul 28 06:18 input.tar.gz
[2025-07-28 07:52:32] -rw-r--r-- 2 boinc boinc     15095 Jul 28 06:18 start_atlas.sh
[2025-07-28 07:52:32] -rw------- 1 boinc boinc 211805000 Jul 28 07:51 HITS.pool.root.1
[2025-07-28 07:52:32] -rw------- 1 boinc boinc    808960 Jul 28 07:52 result.tar.gz
07:52:34 (1628757): run_atlas exited; CPU time 16141.617719
07:52:34 (1628757): called boinc_finish(0)

</stderr_txt>
]]>

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