Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:20:31 (3845163): wrapper (7.7.26015): starting
12:20:31 (3845163): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 12:20:32] Arguments: --nthreads 8
[2025-07-27 12:20:32] Threads: 8
[2025-07-27 12:20:32] Checking for CVMFS
[2025-07-27 12:20:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:20:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:20:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:20:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:20:33] 2.13.0.0 558603 18615 430192 148818 0 324 20409518 32935936 20571 16776704 0 56036788 99.537 95781647 20349 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 12:20:33] CVMFS is ok
[2025-07-27 12:20:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:20:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:20:33] Further information can be found at the LHC@home message board.
[2025-07-27 12:20:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:20:33] Checking for apptainer binary...
[2025-07-27 12:20:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:20:33] Running /usr/bin/apptainer --version
[2025-07-27 12:20:33] apptainer version 1.4.1-1.el9
[2025-07-27 12:20:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:20:33] c6-6-8-3.aglt2.org
[2025-07-27 12:20:33] apptainer works
[2025-07-27 12:20:33] Set ATHENA_PROC_NUMBER=8
[2025-07-27 12:20:33] Set ATHENA_CORE_NUMBER=8
[2025-07-27 12:20:33] Starting ATLAS job with PandaID=6747375914
[2025-07-27 12:20:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:46:39]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:46:39] 2025-07-27 19:46:00,067 | INFO     | monitor loop #766: job 0:6747375914 is in state 'finished'
[2025-07-27 15:46:39] 2025-07-27 19:46:00,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:46:39] 2025-07-27 19:46:02,584 | INFO     | monitor loop #767: job 0:6747375914 is in state 'finished'
[2025-07-27 15:46:39] 2025-07-27 19:46:02,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:46:39] 2025-07-27 19:46:05,008 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 15:46:39] 2025-07-27 19:46:05,039 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2506.563625
[2025-07-27 15:46:39] 2025-07-27 19:46:05,073 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747375914/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:46:39] 2025-07-27 19:46:05,078 | INFO     | extracted standard info from prmon json
[2025-07-27 15:46:39] 2025-07-27 19:46:05,079 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:46:39] 2025-07-27 19:46:05,079 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:46:39] 2025-07-27 19:46:05,079 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:46:39] 2025-07-27 19:46:05,079 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:46:39] 2025-07-27 19:46:05,087 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:46:39] 2025-07-27 19:46:05,087 | INFO     | sum of square deviations: 2480576737.5000014
[2025-07-27 15:46:39] 2025-07-27 19:46:05,093 | INFO     | sum of deviations: -24925642635.899994
[2025-07-27 15:46:39] 2025-07-27 19:46:05,093 | INFO     | mean x: 1753639401.65
[2025-07-27 15:46:39] 2025-07-27 19:46:05,093 | INFO     | mean y: 2202035.63
[2025-07-27 15:46:39] 2025-07-27 19:46:05,093 | INFO     | -- intersect: 17623341658.91544
[2025-07-27 15:46:39] 2025-07-27 19:46:05,094 | INFO     | intersect: 17623341658.91544
[2025-07-27 15:46:39] 2025-07-27 19:46:05,094 | INFO     | chi2: 2.386704584921141
[2025-07-27 15:46:39] 2025-07-27 19:46:05,094 | INFO     | sum of square deviations: 2299149927.384627
[2025-07-27 15:46:39] 2025-07-27 19:46:05,096 | INFO     | sum of deviations: -22980337610.615376
[2025-07-27 15:46:39] 2025-07-27 19:46:05,096 | INFO     | mean x: 1753639249.1538463
[2025-07-27 15:46:39] 2025-07-27 19:46:05,096 | INFO     | mean y: 2203659.6205128203
[2025-07-27 15:46:39] 2025-07-27 19:46:05,096 | INFO     | -- intersect: 17530082773.89097
[2025-07-27 15:46:39] 2025-07-27 19:46:05,096 | INFO     | intersect: 17530082773.89097
[2025-07-27 15:46:39] 2025-07-27 19:46:05,096 | INFO     | chi2: 2.3846698445092267
[2025-07-27 15:46:39] 2025-07-27 19:46:05,101 | INFO     | current chi2=2.3846698445092267 (change=0.0852531320704411 %)
[2025-07-27 15:46:39] 2025-07-27 19:46:05,101 | INFO     | right removable region: 194
[2025-07-27 15:46:39] 2025-07-27 19:46:05,101 | INFO     | sum of square deviations: 2299131627.384627
[2025-07-27 15:46:39] 2025-07-27 19:46:05,102 | INFO     | sum of deviations: -57774077891.6154
[2025-07-27 15:46:39] 2025-07-27 19:46:05,103 | INFO     | mean x: 1753639554.1538463
[2025-07-27 15:46:39] 2025-07-27 19:46:05,103 | INFO     | mean y: 2229438.087179487
[2025-07-27 15:46:39] 2025-07-27 19:46:05,103 | INFO     | -- intersect: 44068827012.90834
[2025-07-27 15:46:39] 2025-07-27 19:46:05,103 | INFO     | intersect: 44068827012.90834
[2025-07-27 15:46:39] 2025-07-27 19:46:05,103 | INFO     | chi2: 0.5876100536306071
[2025-07-27 15:46:39] 2025-07-27 19:46:05,103 | INFO     | current chi2=0.5876100536306071 (change=75.37985818005949 %)
[2025-07-27 15:46:39] 2025-07-27 19:46:05,104 | INFO     | sum of square deviations: 2126756454.7631576
[2025-07-27 15:46:39] 2025-07-27 19:46:05,104 | INFO     | sum of deviations: -60708080406.92099
[2025-07-27 15:46:39] 2025-07-27 19:46:05,106 | INFO     | mean x: 1753639706.6578948
[2025-07-27 15:46:39] 2025-07-27 19:46:05,106 | INFO     | mean y: 2231986.647368421
[2025-07-27 15:46:39] 2025-07-27 19:46:05,106 | INFO     | -- intersect: 50059726853.125885
[2025-07-27 15:46:39] 2025-07-27 19:46:05,106 | INFO     | intersect: 50059726853.125885
[2025-07-27 15:46:39] 2025-07-27 19:46:05,106 | INFO     | chi2: 0.5098735683081794
[2025-07-27 15:46:39] 2025-07-27 19:46:05,107 | INFO     | current chi2=0.5098735683081794 (change=13.229264006312539 %)
[2025-07-27 15:46:39] 2025-07-27 19:46:05,107 | INFO     | left removable region: 20
[2025-07-27 15:46:39] 2025-07-27 19:46:05,107 | INFO     | sum of square deviations: 1633429628.6666677
[2025-07-27 15:46:39] 2025-07-27 19:46:05,108 | INFO     | sum of deviations: -45837700637.0
[2025-07-27 15:46:39] 2025-07-27 19:46:05,108 | INFO     | mean x: 1753639828.6666667
[2025-07-27 15:46:39] 2025-07-27 19:46:05,108 | INFO     | mean y: 2223072.724137931
[2025-07-27 15:46:39] 2025-07-27 19:46:05,108 | INFO     | -- intersect: 49213291661.67667
[2025-07-27 15:46:39] 2025-07-27 19:46:05,109 | INFO     | intersect: 49213291661.67667
[2025-07-27 15:46:39] 2025-07-27 19:46:05,109 | INFO     | chi2: 0.494294608619316
[2025-07-27 15:46:39] 2025-07-27 19:46:05,109 | INFO     | -- intersect: 49213291661.67667
[2025-07-27 15:46:39] 2025-07-27 19:46:05,109 | INFO     | current memory leak: -28.06 B/s (using 174 data points, chi2=0.49)
[2025-07-27 15:46:39] 2025-07-27 19:46:05,141 | INFO     | could have reported an average CPU frequency of 2524 MHz (10 samples)
[2025-07-27 15:46:39] 2025-07-27 19:46:05,141 | INFO     | ..............................
[2025-07-27 15:46:39] 2025-07-27 19:46:05,142 | INFO     | . Timing measurements:
[2025-07-27 15:46:39] 2025-07-27 19:46:05,142 | INFO     | . get job = 0 s
[2025-07-27 15:46:39] 2025-07-27 19:46:05,142 | INFO     | . initial setup = 5 s
[2025-07-27 15:46:39] 2025-07-27 19:46:05,142 | INFO     | . payload setup = 17 s
[2025-07-27 15:46:39] 2025-07-27 19:46:05,142 | INFO     | . stage-in = 0 s
[2025-07-27 15:46:39] 2025-07-27 19:46:05,142 | INFO     | . payload execution = 12215 s
[2025-07-27 15:46:39] 2025-07-27 19:46:05,142 | INFO     | . stage-out = 5 s
[2025-07-27 15:46:39] 2025-07-27 19:46:05,142 | INFO     | . log creation = 0 s
[2025-07-27 15:46:39] 2025-07-27 19:46:05,142 | INFO     | ..............................
[2025-07-27 15:46:39] 2025-07-27 19:46:05,686 | INFO     | 
[2025-07-27 15:46:39] 2025-07-27 19:46:05,686 | INFO     | job summary report
[2025-07-27 15:46:39] 2025-07-27 19:46:05,686 | INFO     | --------------------------------------------------
[2025-07-27 15:46:39] 2025-07-27 19:46:05,686 | INFO     | PanDA job id: 6747375914
[2025-07-27 15:46:39] 2025-07-27 19:46:05,686 | INFO     | task id: 45743349
[2025-07-27 15:46:39] 2025-07-27 19:46:05,686 | INFO     | errors: (none)
[2025-07-27 15:46:39] 2025-07-27 19:46:05,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | pilot state: finished 
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | transexitcode: 0
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | exeerrorcode: 0
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | exeerrordiag: 
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | exitcode: 0
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | exitmsg: OK
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | cpuconsumptiontime: 55780 s
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | nevents: 400
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | neventsw: 0
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | pid: 3865803
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | pgrp: 3865803
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | corecount: 8
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | event service: False
[2025-07-27 15:46:39] 2025-07-27 19:46:05,687 | INFO     | sizes: {0: 2397475, 1: 2397475, 12: 2397503, 15: 2397793, 22: 2397821, 12237: 2427307, 12238: 2427434, 12244: 2436488, 12246: 2436544, 12270: 2436738}
[2025-07-27 15:46:39] 2025-07-27 19:46:05,688 | INFO     | --------------------------------------------------
[2025-07-27 15:46:39] 2025-07-27 19:46:05,688 | INFO     | 
[2025-07-27 15:46:39] 2025-07-27 19:46:05,688 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 15:46:39] 2025-07-27 19:46:05,790 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,791 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,791 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,791 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,791 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,791 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,791 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,791 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,791 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,792 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:46:39] 2025-07-27 19:46:05,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,792 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:46:39] 2025-07-27 19:46:05,792 | INFO     | job 6747375914 has completed (purged errors)
[2025-07-27 15:46:39] 2025-07-27 19:46:05,792 | INFO     | overall cleanup function is called
[2025-07-27 15:46:39] 2025-07-27 19:46:06,805 | INFO     | --- collectZombieJob: --- 10, [3865803]
[2025-07-27 15:46:39] 2025-07-27 19:46:06,805 | INFO     | zombie collector waiting for pid 3865803
[2025-07-27 15:46:39] 2025-07-27 19:46:06,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:46:39] 2025-07-27 19:46:06,805 | INFO     | collected zombie processes
[2025-07-27 15:46:39] 2025-07-27 19:46:06,805 | INFO     | will attempt to kill all subprocesses of pid=3865803
[2025-07-27 15:46:39] 2025-07-27 19:46:07,905 | INFO     | process IDs to be killed: [3865803] (in reverse order)
[2025-07-27 15:46:39] 2025-07-27 19:46:08,139 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:46:39] 2025-07-27 19:46:08,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:46:39] 2025-07-27 19:46:08,174 | INFO     | did not find any defunct processes belonging to 3865803
[2025-07-27 15:46:39] 2025-07-27 19:46:08,199 | INFO     | did not find any defunct processes belonging to 3865803
[2025-07-27 15:46:39] 2025-07-27 19:46:08,201 | INFO     | ready for new job
[2025-07-27 15:46:39] 2025-07-27 19:46:08,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:46:39] 2025-07-27 19:46:08,203 | INFO     | ***************************************
[2025-07-27 15:46:39] 2025-07-27 19:46:08,204 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:46:39] 2025-07-27 19:46:08,204 | INFO     | ***************************************
[2025-07-27 15:46:39] 2025-07-27 19:46:08,204 | INFO     | 
[2025-07-27 15:46:39] 2025-07-27 19:46:08,241 | INFO     | architecture information:
[2025-07-27 15:46:39] 2025-07-27 19:46:08,253 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:46:39] 2025-07-27 19:46:08,286 | INFO     | cat /etc/os-release:
[2025-07-27 15:46:39] NAME="CentOS Linux"
[2025-07-27 15:46:39] VERSION="7 (Core)"
[2025-07-27 15:46:39] ID="centos"
[2025-07-27 15:46:39] ID_LIKE="rhel fedora"
[2025-07-27 15:46:39] VERSION_ID="7"
[2025-07-27 15:46:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:46:39] ANSI_COLOR="0;31"
[2025-07-27 15:46:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:46:39] HOME_URL="https://www.centos.org/"
[2025-07-27 15:46:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:46:39] 
[2025-07-27 15:46:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:46:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:46:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:46:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:46:39] 
[2025-07-27 15:46:39] 2025-07-27 19:46:08,286 | INFO     | ***************************************
[2025-07-27 15:46:39] 2025-07-27 19:46:08,790 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 15:46:39] 2025-07-27 19:46:08,823 | INFO     | sufficient remaining disk space (95726600192 B)
[2025-07-27 15:46:39] 2025-07-27 19:46:08,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:46:39] 2025-07-27 19:46:08,824 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:46:39] 2025-07-27 19:46:08,824 | INFO     | update_server=False
[2025-07-27 15:46:39] 2025-07-27 19:46:08,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:46:39] 2025-07-27 19:46:08,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:46:39] 2025-07-27 19:46:08,825 | INFO     | aborting loop
[2025-07-27 15:46:39] 2025-07-27 19:46:09,095 | INFO     | all job control threads have been joined
[2025-07-27 15:46:39] 2025-07-27 19:46:09,139 | INFO     | all data control threads have been joined
[2025-07-27 15:46:39] 2025-07-27 19:46:09,237 | INFO     | all payload control threads have been joined
[2025-07-27 15:46:39] 2025-07-27 19:46:09,832 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:09,838 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:09,977 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:10,103 | INFO     | [job] control thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:10,154 | INFO     | [data] control thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:10,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:46:39] 2025-07-27 19:46:10,243 | INFO     | [payload] control thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:10,294 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:10,317 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:10,507 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:10,530 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:10,713 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:46:39] 2025-07-27 19:46:10,717 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:46:39] 2025-07-27 19:46:11,294 | INFO     | [job] validate thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:11,294 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:11,319 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:11,723 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:12,215 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:14,729 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:46:39] 2025-07-27 19:46:16,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280368514880)>', '<ExcThread(monitor, started 140279696828160)>']
[2025-07-27 15:46:39] 2025-07-27 19:46:21,587 | INFO     | all workflow threads have been joined
[2025-07-27 15:46:39] 2025-07-27 19:46:21,593 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:46:39] 2025-07-27 19:46:21,594 | INFO     | traces error code: 0
[2025-07-27 15:46:39] 2025-07-27 19:46:21,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:46:39] 2025-07-27 19:46:38,601 | INFO     | PID=3850672 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 15:46:39] 2025-07-27 19:46:38,601 | INFO     | .. there are 31 such processes running
[2025-07-27 15:46:39] 2025-07-27 19:46:38,602 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:46:39] 2025-07-27 19:46:38,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:46:39] 2025-07-27 19:46:38,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:46:39] 2025-07-27 19:46:38,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:46:39] 2025-07-27 19:46:38,602 | INFO     | [monitor] control thread has ended
[2025-07-27 15:46:39] 2025-07-27 19:46:38,938 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:46:39] 2025-07-27 19:46:38,943 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:46:39] 2025-07-27 19:46:38,946 [wrapper] pilotpid: 3850672
[2025-07-27 15:46:39] 2025-07-27 19:46:38,949 [wrapper] Pilot exit status: 0
[2025-07-27 15:46:39] 2025-07-27 19:46:38,979 [wrapper] pandaids: 6747375914
[2025-07-27 15:46:39] 2025-07-27 19:46:39,097 [wrapper] cleanup supervisor_pilot  443853 3850673
[2025-07-27 15:46:39] 2025-07-27 19:46:39,106 [wrapper] Test setup, not cleaning
[2025-07-27 15:46:39] 2025-07-27 19:46:39,115 [wrapper] apfmon messages muted
[2025-07-27 15:46:39] 2025-07-27 19:46:39,119 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:46:39] 2025-07-27 19:46:39,123 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:46:39]  *** Error codes and diagnostics ***
[2025-07-27 15:46:39]     "exeErrorCode": 0,
[2025-07-27 15:46:39]     "exeErrorDiag": "",
[2025-07-27 15:46:39]     "pilotErrorCode": 0,
[2025-07-27 15:46:39]     "pilotErrorDiag": "",
[2025-07-27 15:46:39]  *** Listing of results directory ***
[2025-07-27 15:46:39] total 390876
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 06:40 pilot3.tar.gz
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 06:46 queuedata.json
[2025-07-27 15:46:39] -rwx------. 1 boincer umatlas     36292 Jul 27 06:48 runpilot2-wrapper.sh
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas       100 Jul 27 12:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:46:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 12:20 run_atlas
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas       105 Jul 27 12:20 job.xml
[2025-07-27 15:46:39] -rw-r--r--. 2 boincer umatlas 184927462 Jul 27 12:20 EVNT.45743347._002619.pool.root.1
[2025-07-27 15:46:39] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 12:20 shared
[2025-07-27 15:46:39] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 12:20 input.tar.gz
[2025-07-27 15:46:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:20 start_atlas.sh
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas         0 Jul 27 12:20 boinc_lockfile
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 12:20 pandaJob.out
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas    980125 Jul 27 12:20 agis_schedconf.cvmfs.json
[2025-07-27 15:46:39] drwx------. 4 boincer umatlas      4096 Jul 27 12:21 pilot3
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas      6858 Jul 27 15:37 init_data.xml
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas 208678897 Jul 27 15:44 HITS.45743349._047149.pool.root.1
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas       531 Jul 27 15:44 boinc_task_state.xml
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas      1039 Jul 27 15:45 memory_monitor_summary.json
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas   1593052 Jul 27 15:45 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas    366096 Jul 27 15:45 log.45743349._047149.job.log.tgz.1
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas        95 Jul 27 15:45 pilot_heartbeat.json
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas      7831 Jul 27 15:46 heartbeat.json
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas        28 Jul 27 15:46 wrapper_checkpoint.txt
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 15:46 boinc_mmap_file
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas       823 Jul 27 15:46 pilotlog.txt
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas   1022094 Jul 27 15:46 log.45743349._047149.job.log.1
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas       357 Jul 27 15:46 output.list
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas       620 Jul 27 15:46 runtime_log
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas   1402880 Jul 27 15:46 result.tar.gz
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas      8661 Jul 27 15:46 runtime_log.err
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas       655 Jul 27 15:46 0uOODmJ6D07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv3ULDm1xT5fm.diag
[2025-07-27 15:46:39] -rw-r--r--. 1 boincer umatlas     21254 Jul 27 15:46 stderr.txt
[2025-07-27 15:46:39] HITS file was successfully produced:
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas 208678897 Jul 27 15:44 shared/HITS.pool.root.1
[2025-07-27 15:46:39]  *** Contents of shared directory: ***
[2025-07-27 15:46:39] total 386312
[2025-07-27 15:46:39] -rw-r--r--. 2 boincer umatlas 184927462 Jul 27 12:20 ATLAS.root_0
[2025-07-27 15:46:39] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 12:20 input.tar.gz
[2025-07-27 15:46:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:20 start_atlas.sh
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas 208678897 Jul 27 15:44 HITS.pool.root.1
[2025-07-27 15:46:39] -rw-------. 1 boincer umatlas   1402880 Jul 27 15:46 result.tar.gz
15:46:40 (3845163): run_atlas exited; CPU time 56373.547423
15:46:40 (3845163): called boinc_finish(0)

</stderr_txt>
]]>

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