Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:27:04 (31661): wrapper (7.7.26015): starting
12:27:04 (31661): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 12:27:04] Arguments: --nthreads 12
[2025-07-27 12:27:04] Threads: 12
[2025-07-27 12:27:04] Checking for CVMFS
[2025-07-27 12:27:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:27:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:27:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:27:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:27:05] 2.11.2.0 3081 112194 101280 148818 1 59 14881007 20275200 1 130560 0 38340227 99.970 9640376 10532 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 12:27:05] CVMFS is ok
[2025-07-27 12:27:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:27:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:27:05] Further information can be found at the LHC@home message board.
[2025-07-27 12:27:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:27:05] Checking for apptainer binary...
[2025-07-27 12:27:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:27:05] Running /usr/bin/apptainer --version
[2025-07-27 12:27:05] apptainer version 1.3.2-1.el7
[2025-07-27 12:27:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:27:06] c-205-29.aglt2.org
[2025-07-27 12:27:06] apptainer works
[2025-07-27 12:27:06] Set ATHENA_PROC_NUMBER=12
[2025-07-27 12:27:06] Set ATHENA_CORE_NUMBER=12
[2025-07-27 12:27:06] Starting ATLAS job with PandaID=6746476138
[2025-07-27 12:27:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:49:45]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:49:45]  replicas=None
[2025-07-27 13:49:45]  scope=mc23_13p6TeV
[2025-07-27 13:49:45]  status=None
[2025-07-27 13:49:45]  status_code=0
[2025-07-27 13:49:45]  storage_token=
[2025-07-27 13:49:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746476138/log.45759290._000018.job.log.tgz.1
[2025-07-27 13:49:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/92/log.45759290._000018.job.log.tgz.1
[2025-07-27 13:49:45]  workdir=None
[2025-07-27 13:49:45] ]
[2025-07-27 13:49:45] 2025-07-27 17:49:04,575 | INFO     | transferring file log.45759290._000018.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746476138/log.45759290._000018.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 13:49:45] 2025-07-27 17:49:04,575 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746476138/log.45759290._000018.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759290._000018.job
[2025-07-27 13:49:45] 2025-07-27 17:49:04,597 | INFO     | adding to output.list: log.45759290._000018.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/92/log.45759290._000018.job.log.tg
[2025-07-27 13:49:45] 2025-07-27 17:49:04,599 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 13:49:45] 2025-07-27 17:49:04,599 | INFO     | summary of transferred files:
[2025-07-27 13:49:45] 2025-07-27 17:49:04,599 | INFO     |  -- lfn=log.45759290._000018.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 13:49:45] 2025-07-27 17:49:04,599 | INFO     | stage-out finished correctly
[2025-07-27 13:49:45] 2025-07-27 17:49:04,689 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 13:49:45] 2025-07-27 17:49:04,868 | INFO     | PID=2963 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 13:49:45] 2025-07-27 17:49:07,143 | WARNING  | process 9418 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 13:49:45] 2025-07-27 17:49:07,143 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746476138/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:49:45] 2025-07-27 17:49:07,229 | INFO     | number of running child processes to parent process 9418: 1
[2025-07-27 13:49:45] 2025-07-27 17:49:07,229 | INFO     | maximum number of monitored processes: 6
[2025-07-27 13:49:45] 2025-07-27 17:49:07,621 | INFO     | job 6746476138 has state=finished
[2025-07-27 13:49:45] 2025-07-27 17:49:07,621 | INFO     | preparing for final server update for job 6746476138 in state='finished'
[2025-07-27 13:49:45] 2025-07-27 17:49:07,622 | INFO     | this job has now completed (state=finished)
[2025-07-27 13:49:45] 2025-07-27 17:49:07,622 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 13:49:45] 2025-07-27 17:49:07,622 | INFO     | log transfer has been attempted: DONE
[2025-07-27 13:49:45] 2025-07-27 17:49:07,622 | INFO     | job 6746476138 has finished - writing final server update
[2025-07-27 13:49:45] 2025-07-27 17:49:07,623 | INFO     | total number of processed events: 400 (read)
[2025-07-27 13:49:45] 2025-07-27 17:49:07,624 | INFO     | executing command: lscpu
[2025-07-27 13:49:45] 2025-07-27 17:49:07,649 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 13:49:45] 2025-07-27 17:49:09,732 | INFO     | monitor loop #366: job 0:6746476138 is in state 'finished'
[2025-07-27 13:49:45] 2025-07-27 17:49:09,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:49:45] 2025-07-27 17:49:12,235 | INFO     | monitor loop #367: job 0:6746476138 is in state 'finished'
[2025-07-27 13:49:45] 2025-07-27 17:49:12,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:49:45] 2025-07-27 17:49:12,596 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 13:49:45] 2025-07-27 17:49:12,599 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-27 13:49:45] 2025-07-27 17:49:12,602 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746476138/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:49:45] 2025-07-27 17:49:12,603 | INFO     | extracted standard info from prmon json
[2025-07-27 13:49:45] 2025-07-27 17:49:12,603 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:49:45] 2025-07-27 17:49:12,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:49:45] 2025-07-27 17:49:12,604 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:49:45] 2025-07-27 17:49:12,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:49:45] 2025-07-27 17:49:12,606 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:49:45] 2025-07-27 17:49:12,606 | INFO     | sum of square deviations: 120605052.0
[2025-07-27 13:49:45] 2025-07-27 17:49:12,606 | INFO     | sum of deviations: -9912363116.000004
[2025-07-27 13:49:45] 2025-07-27 17:49:12,606 | INFO     | mean x: 1753636172.0
[2025-07-27 13:49:45] 2025-07-27 17:49:12,606 | INFO     | mean y: 2859061.8767123288
[2025-07-27 13:49:45] 2025-07-27 17:49:12,607 | INFO     | -- intersect: 144131800776.6586
[2025-07-27 13:49:45] 2025-07-27 17:49:12,607 | INFO     | intersect: 144131800776.6586
[2025-07-27 13:49:45] 2025-07-27 17:49:12,607 | INFO     | chi2: 0.062028270542718957
[2025-07-27 13:49:45] 2025-07-27 17:49:12,607 | INFO     | -- intersect: 144131800776.6586
[2025-07-27 13:49:45] 2025-07-27 17:49:12,607 | INFO     | current memory leak: -82.19 B/s (using 73 data points, chi2=0.06)
[2025-07-27 13:49:45] 2025-07-27 17:49:12,607 | INFO     | could have reported an average CPU frequency of 2056 MHz (6 samples)
[2025-07-27 13:49:45] 2025-07-27 17:49:12,608 | INFO     | ..............................
[2025-07-27 13:49:45] 2025-07-27 17:49:12,608 | INFO     | . Timing measurements:
[2025-07-27 13:49:45] 2025-07-27 17:49:12,608 | INFO     | . get job = 0 s
[2025-07-27 13:49:45] 2025-07-27 17:49:12,608 | INFO     | . initial setup = 2 s
[2025-07-27 13:49:45] 2025-07-27 17:49:12,608 | INFO     | . payload setup = 9 s
[2025-07-27 13:49:45] 2025-07-27 17:49:12,608 | INFO     | . stage-in = 0 s
[2025-07-27 13:49:45] 2025-07-27 17:49:12,608 | INFO     | . payload execution = 4874 s
[2025-07-27 13:49:45] 2025-07-27 17:49:12,608 | INFO     | . stage-out = 0 s
[2025-07-27 13:49:45] 2025-07-27 17:49:12,608 | INFO     | . log creation = 0 s
[2025-07-27 13:49:45] 2025-07-27 17:49:12,609 | INFO     | ..............................
[2025-07-27 13:49:45] 2025-07-27 17:49:12,692 | INFO     | 
[2025-07-27 13:49:45] 2025-07-27 17:49:12,692 | INFO     | job summary report
[2025-07-27 13:49:45] 2025-07-27 17:49:12,692 | INFO     | --------------------------------------------------
[2025-07-27 13:49:45] 2025-07-27 17:49:12,692 | INFO     | PanDA job id: 6746476138
[2025-07-27 13:49:45] 2025-07-27 17:49:12,692 | INFO     | task id: 45759290
[2025-07-27 13:49:45] 2025-07-27 17:49:12,692 | INFO     | errors: (none)
[2025-07-27 13:49:45] 2025-07-27 17:49:12,693 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:49:45] 2025-07-27 17:49:12,693 | INFO     | pilot state: finished 
[2025-07-27 13:49:45] 2025-07-27 17:49:12,693 | INFO     | transexitcode: 0
[2025-07-27 13:49:45] 2025-07-27 17:49:12,693 | INFO     | exeerrorcode: 0
[2025-07-27 13:49:45] 2025-07-27 17:49:12,693 | INFO     | exeerrordiag: 
[2025-07-27 13:49:45] 2025-07-27 17:49:12,693 | INFO     | exitcode: 0
[2025-07-27 13:49:45] 2025-07-27 17:49:12,693 | INFO     | exitmsg: OK
[2025-07-27 13:49:45] 2025-07-27 17:49:12,694 | INFO     | cpuconsumptiontime: 53468 s
[2025-07-27 13:49:45] 2025-07-27 17:49:12,694 | INFO     | nevents: 400
[2025-07-27 13:49:45] 2025-07-27 17:49:12,694 | INFO     | neventsw: 0
[2025-07-27 13:49:45] 2025-07-27 17:49:12,694 | INFO     | pid: 9418
[2025-07-27 13:49:45] 2025-07-27 17:49:12,694 | INFO     | pgrp: 9418
[2025-07-27 13:49:45] 2025-07-27 17:49:12,694 | INFO     | corecount: 12
[2025-07-27 13:49:45] 2025-07-27 17:49:12,694 | INFO     | event service: False
[2025-07-27 13:49:45] 2025-07-27 17:49:12,694 | INFO     | sizes: {0: 2396632, 1: 2397488, 6: 2397750, 12: 2397778, 4888: 2423987, 4889: 2433169, 4897: 2433307}
[2025-07-27 13:49:45] 2025-07-27 17:49:12,694 | INFO     | --------------------------------------------------
[2025-07-27 13:49:45] 2025-07-27 17:49:12,694 | INFO     | 
[2025-07-27 13:49:45] 2025-07-27 17:49:12,695 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 13:49:45] 2025-07-27 17:49:12,716 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,716 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,717 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,717 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,717 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,717 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,719 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,719 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,719 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:49:45] 2025-07-27 17:49:12,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,719 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:49:45] 2025-07-27 17:49:12,720 | INFO     | job 6746476138 has completed (purged errors)
[2025-07-27 13:49:45] 2025-07-27 17:49:12,720 | INFO     | overall cleanup function is called
[2025-07-27 13:49:45] 2025-07-27 17:49:13,728 | INFO     | --- collectZombieJob: --- 10, [9418]
[2025-07-27 13:49:45] 2025-07-27 17:49:13,728 | INFO     | zombie collector waiting for pid 9418
[2025-07-27 13:49:45] 2025-07-27 17:49:13,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:49:45] 2025-07-27 17:49:13,728 | INFO     | collected zombie processes
[2025-07-27 13:49:45] 2025-07-27 17:49:13,729 | INFO     | will attempt to kill all subprocesses of pid=9418
[2025-07-27 13:49:45] 2025-07-27 17:49:13,817 | INFO     | process IDs to be killed: [9418] (in reverse order)
[2025-07-27 13:49:45] 2025-07-27 17:49:13,889 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:49:45] 2025-07-27 17:49:13,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:49:45] 2025-07-27 17:49:13,893 | INFO     | did not find any defunct processes belonging to 9418
[2025-07-27 13:49:45] 2025-07-27 17:49:13,896 | INFO     | did not find any defunct processes belonging to 9418
[2025-07-27 13:49:45] 2025-07-27 17:49:13,896 | INFO     | ready for new job
[2025-07-27 13:49:45] 2025-07-27 17:49:13,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:49:45] 2025-07-27 17:49:13,897 | INFO     | ***************************************
[2025-07-27 13:49:45] 2025-07-27 17:49:13,897 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:49:45] 2025-07-27 17:49:13,897 | INFO     | ***************************************
[2025-07-27 13:49:45] 2025-07-27 17:49:13,897 | INFO     | 
[2025-07-27 13:49:45] 2025-07-27 17:49:13,898 | INFO     | architecture information:
[2025-07-27 13:49:45] 2025-07-27 17:49:13,899 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:49:45] 2025-07-27 17:49:13,913 | INFO     | cat /etc/os-release:
[2025-07-27 13:49:45] NAME="CentOS Linux"
[2025-07-27 13:49:45] VERSION="7 (Core)"
[2025-07-27 13:49:45] ID="centos"
[2025-07-27 13:49:45] ID_LIKE="rhel fedora"
[2025-07-27 13:49:45] VERSION_ID="7"
[2025-07-27 13:49:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:49:45] ANSI_COLOR="0;31"
[2025-07-27 13:49:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:49:45] HOME_URL="https://www.centos.org/"
[2025-07-27 13:49:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:49:45] 
[2025-07-27 13:49:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:49:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:49:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:49:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:49:45] 
[2025-07-27 13:49:45] 2025-07-27 17:49:13,914 | INFO     | ***************************************
[2025-07-27 13:49:45] 2025-07-27 17:49:14,416 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 13:49:45] 2025-07-27 17:49:14,434 | INFO     | sufficient remaining disk space (29352787968 B)
[2025-07-27 13:49:45] 2025-07-27 17:49:14,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:49:45] 2025-07-27 17:49:14,434 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:49:45] 2025-07-27 17:49:14,435 | INFO     | update_server=False
[2025-07-27 13:49:45] 2025-07-27 17:49:14,435 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:49:45] 2025-07-27 17:49:14,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:49:45] 2025-07-27 17:49:14,467 | INFO     | all job control threads have been joined
[2025-07-27 13:49:45] 2025-07-27 17:49:14,562 | INFO     | all payload control threads have been joined
[2025-07-27 13:49:45] 2025-07-27 17:49:14,738 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 13:49:45] 2025-07-27 17:49:14,739 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 13:49:45] 2025-07-27 17:49:14,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:49:45] 2025-07-27 17:49:14,739 | INFO     | will abort loop
[2025-07-27 13:49:45] 2025-07-27 17:49:15,003 | INFO     | all data control threads have been joined
[2025-07-27 13:49:45] 2025-07-27 17:49:15,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:49:45] 2025-07-27 17:49:15,280 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:49:45] 2025-07-27 17:49:15,440 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:15,441 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:15,472 | INFO     | [job] control thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:15,492 | INFO     | [job] validate thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:15,495 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:15,568 | INFO     | [payload] control thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:15,673 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:15,745 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:15,954 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:16,009 | INFO     | [data] control thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:16,099 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:16,676 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:16,969 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:17,209 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:19,281 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:25,044 | INFO     | job.realtimelogging is not enabled
[2025-07-27 13:49:45] 2025-07-27 17:49:26,049 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:49:45] 2025-07-27 17:49:27,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125141423936)>', '<ExcThread(monitor, started 140124096550656)>']
[2025-07-27 13:49:45] 2025-07-27 17:49:32,179 | INFO     | all workflow threads have been joined
[2025-07-27 13:49:45] 2025-07-27 17:49:32,179 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:49:45] 2025-07-27 17:49:32,180 | INFO     | traces error code: 0
[2025-07-27 13:49:45] 2025-07-27 17:49:32,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:49:45] 2025-07-27 17:49:45,081 | INFO     | PID=2963 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 13:49:45] 2025-07-27 17:49:45,082 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:49:45] 2025-07-27 17:49:45,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:49:45] 2025-07-27 17:49:45,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:49:45] 2025-07-27 17:49:45,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:49:45] 2025-07-27 17:49:45,082 | INFO     | [monitor] control thread has ended
[2025-07-27 13:49:45] 2025-07-27 17:49:45,168 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:49:45] 2025-07-27 17:49:45,172 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:49:45] 2025-07-27 17:49:45,176 [wrapper] pilotpid: 2963
[2025-07-27 13:49:45] 2025-07-27 17:49:45,180 [wrapper] Pilot exit status: 0
[2025-07-27 13:49:45] 2025-07-27 17:49:45,196 [wrapper] pandaids: 6746476138
[2025-07-27 13:49:45] 2025-07-27 17:49:45,236 [wrapper] cleanup supervisor_pilot 27573 2964
[2025-07-27 13:49:45] 2025-07-27 17:49:45,240 [wrapper] Test setup, not cleaning
[2025-07-27 13:49:45] 2025-07-27 17:49:45,244 [wrapper] apfmon messages muted
[2025-07-27 13:49:45] 2025-07-27 17:49:45,247 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:49:45] 2025-07-27 17:49:45,251 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:49:45]  *** Error codes and diagnostics ***
[2025-07-27 13:49:45]     "exeErrorCode": 0,
[2025-07-27 13:49:45]     "exeErrorDiag": "",
[2025-07-27 13:49:45]     "pilotErrorCode": 0,
[2025-07-27 13:49:45]     "pilotErrorDiag": "",
[2025-07-27 13:49:45]  *** Listing of results directory ***
[2025-07-27 13:49:45] total 413384
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 03:44 pilot3.tar.gz
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 03:54 queuedata.json
[2025-07-27 13:49:45] -rwx------ 1 boincer umatlas     36292 Jul 27 03:55 runpilot2-wrapper.sh
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas       100 Jul 27 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:49:45] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 12:27 run_atlas
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas       105 Jul 27 12:27 job.xml
[2025-07-27 13:49:45] -rw-r--r-- 2 boincer umatlas 245387892 Jul 27 12:27 EVNT.45759282._000005.pool.root.1
[2025-07-27 13:49:45] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:27 start_atlas.sh
[2025-07-27 13:49:45] drwxrwx--x 2 boincer umatlas      4096 Jul 27 12:27 shared
[2025-07-27 13:49:45] -rw-r--r-- 2 boincer umatlas    542872 Jul 27 12:27 input.tar.gz
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas         0 Jul 27 12:27 boinc_lockfile
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas      2554 Jul 27 12:27 pandaJob.out
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas    980125 Jul 27 12:27 agis_schedconf.cvmfs.json
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas   1593052 Jul 27 12:27 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:49:45] drwx------ 4 boincer umatlas      4096 Jul 27 12:27 pilot3
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 13:45 init_data.xml
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas 172357824 Jul 27 13:48 HITS.45759290._000018.pool.root.1
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas       529 Jul 27 13:48 boinc_task_state.xml
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas      1049 Jul 27 13:49 memory_monitor_summary.json
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas    372888 Jul 27 13:49 log.45759290._000018.job.log.tgz.1
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas      7846 Jul 27 13:49 heartbeat.json
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 13:49 boinc_mmap_file
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas        27 Jul 27 13:49 wrapper_checkpoint.txt
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas        95 Jul 27 13:49 pilot_heartbeat.json
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas       744 Jul 27 13:49 pilotlog.txt
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas    466214 Jul 27 13:49 log.45759290._000018.job.log.1
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas       357 Jul 27 13:49 output.list
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas       620 Jul 27 13:49 runtime_log
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas    860160 Jul 27 13:49 result.tar.gz
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 13:49 runtime_log.err
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas       659 Jul 27 13:49 8sZLDmCPB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhhULDmcevHHn.diag
[2025-07-27 13:49:45] -rw-r--r-- 1 boincer umatlas     21932 Jul 27 13:49 stderr.txt
[2025-07-27 13:49:45] HITS file was successfully produced:
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas 172357824 Jul 27 13:48 shared/HITS.pool.root.1
[2025-07-27 13:49:45]  *** Contents of shared directory: ***
[2025-07-27 13:49:45] total 409356
[2025-07-27 13:49:45] -rw-r--r-- 2 boincer umatlas 245387892 Jul 27 12:27 ATLAS.root_0
[2025-07-27 13:49:45] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:27 start_atlas.sh
[2025-07-27 13:49:45] -rw-r--r-- 2 boincer umatlas    542872 Jul 27 12:27 input.tar.gz
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas 172357824 Jul 27 13:48 HITS.pool.root.1
[2025-07-27 13:49:45] -rw------- 1 boincer umatlas    860160 Jul 27 13:49 result.tar.gz
13:49:46 (31661): run_atlas exited; CPU time 53435.092591
13:49:46 (31661): called boinc_finish(0)

</stderr_txt>
]]>

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