Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:56:07 (1027336): wrapper (7.7.26015): starting
11:56:07 (1027336): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 11:56:07] Arguments: --nthreads 8
[2025-07-27 11:56:07] Threads: 8
[2025-07-27 11:56:07] Checking for CVMFS
[2025-07-27 11:56:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 11:56:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 11:56:08] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 11:56:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 11:56:08] 2.12.6.0 4167112 18588 313044 148817 3 344 21851472 32935936 20641 16776704 1 100114475 99.674 166437599 16365 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 11:56:08] CVMFS is ok
[2025-07-27 11:56:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 11:56:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 11:56:08] Further information can be found at the LHC@home message board.
[2025-07-27 11:56:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:56:08] Checking for apptainer binary...
[2025-07-27 11:56:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 11:56:08] Running /usr/bin/apptainer --version
[2025-07-27 11:56:09] apptainer version 1.4.1-1.el9
[2025-07-27 11:56:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:56:09] c7-16-8.aglt2.org
[2025-07-27 11:56:09] apptainer works
[2025-07-27 11:56:09] Set ATHENA_PROC_NUMBER=8
[2025-07-27 11:56:09] Set ATHENA_CORE_NUMBER=8
[2025-07-27 11:56:09] Starting ATLAS job with PandaID=6744927828
[2025-07-27 11:56:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 14:02:56]  *** The last 200 lines of the pilot log: ***
[2025-07-27 14:02:56] 2025-07-27 18:02:22,010 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 14:02:56] 2025-07-27 18:02:22,011 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 14:02:56] 2025-07-27 18:02:22,013 | INFO     | fitting pss+swap vs Time
[2025-07-27 14:02:56] 2025-07-27 18:02:22,013 | INFO     | sum of square deviations: 576985702.0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,013 | INFO     | sum of deviations: 2858798793.999999
[2025-07-27 14:02:56] 2025-07-27 18:02:22,013 | INFO     | mean x: 1753635584.0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,014 | INFO     | mean y: 2227241.8943089433
[2025-07-27 14:02:56] 2025-07-27 18:02:22,014 | INFO     | -- intersect: -8686534499.12832
[2025-07-27 14:02:56] 2025-07-27 18:02:22,014 | INFO     | intersect: -8686534499.12832
[2025-07-27 14:02:56] 2025-07-27 18:02:22,014 | INFO     | chi2: 2.3902287483002955
[2025-07-27 14:02:56] 2025-07-27 18:02:22,014 | INFO     | sum of square deviations: 509440249.5
[2025-07-27 14:02:56] 2025-07-27 18:02:22,015 | INFO     | sum of deviations: 10011385026.0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,015 | INFO     | mean x: 1753635431.5
[2025-07-27 14:02:56] 2025-07-27 18:02:22,015 | INFO     | mean y: 2242829.2033898304
[2025-07-27 14:02:56] 2025-07-27 18:02:22,015 | INFO     | -- intersect: -34459736798.85532
[2025-07-27 14:02:56] 2025-07-27 18:02:22,015 | INFO     | intersect: -34459736798.85532
[2025-07-27 14:02:56] 2025-07-27 18:02:22,015 | INFO     | chi2: 1.6111327911942144
[2025-07-27 14:02:56] 2025-07-27 18:02:22,015 | INFO     | current chi2=1.6111327911942144 (change=32.59503751095373 %)
[2025-07-27 14:02:56] 2025-07-27 18:02:22,015 | INFO     | sum of square deviations: 447383272.0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,016 | INFO     | sum of deviations: 9323700306.000002
[2025-07-27 14:02:56] 2025-07-27 18:02:22,016 | INFO     | mean x: 1753635279.0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,016 | INFO     | mean y: 2241147.610619469
[2025-07-27 14:02:56] 2025-07-27 18:02:22,016 | INFO     | -- intersect: -36544431047.64459
[2025-07-27 14:02:56] 2025-07-27 18:02:22,016 | INFO     | intersect: -36544431047.64459
[2025-07-27 14:02:56] 2025-07-27 18:02:22,016 | INFO     | chi2: 1.613630189536933
[2025-07-27 14:02:56] 2025-07-27 18:02:22,016 | INFO     | current chi2=1.613630189536933 (change=-0.1550088457244683 %)
[2025-07-27 14:02:56] 2025-07-27 18:02:22,016 | INFO     | right removable region: 112
[2025-07-27 14:02:56] 2025-07-27 18:02:22,016 | INFO     | sum of square deviations: 509440249.5
[2025-07-27 14:02:56] 2025-07-27 18:02:22,017 | INFO     | sum of deviations: -13824504145.5
[2025-07-27 14:02:56] 2025-07-27 18:02:22,017 | INFO     | mean x: 1753635736.5
[2025-07-27 14:02:56] 2025-07-27 18:02:22,017 | INFO     | mean y: 2264219.584745763
[2025-07-27 14:02:56] 2025-07-27 18:02:22,017 | INFO     | -- intersect: 47590071686.181854
[2025-07-27 14:02:56] 2025-07-27 18:02:22,017 | INFO     | intersect: 47590071686.181854
[2025-07-27 14:02:56] 2025-07-27 18:02:22,017 | INFO     | chi2: 0.9028091160630194
[2025-07-27 14:02:56] 2025-07-27 18:02:22,017 | INFO     | current chi2=0.9028091160630194 (change=62.22917506514756 %)
[2025-07-27 14:02:56] 2025-07-27 18:02:22,018 | INFO     | sum of square deviations: 447383272.0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,018 | INFO     | sum of deviations: -11754743249.0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,018 | INFO     | mean x: 1753635889.0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,018 | INFO     | mean y: 2258964.1858407077
[2025-07-27 14:02:56] 2025-07-27 18:02:22,018 | INFO     | -- intersect: 46078053294.34771
[2025-07-27 14:02:56] 2025-07-27 18:02:22,018 | INFO     | intersect: 46078053294.34771
[2025-07-27 14:02:56] 2025-07-27 18:02:22,019 | INFO     | chi2: 0.8723506063759364
[2025-07-27 14:02:56] 2025-07-27 18:02:22,019 | INFO     | current chi2=0.8723506063759364 (change=3.3737485748822293 %)
[2025-07-27 14:02:56] 2025-07-27 18:02:22,019 | INFO     | left removable region: 20
[2025-07-27 14:02:56] 2025-07-27 18:02:22,019 | INFO     | sum of square deviations: 241429643.0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,019 | INFO     | sum of deviations: -155109122.49999994
[2025-07-27 14:02:56] 2025-07-27 18:02:22,019 | INFO     | mean x: 1753635858.5
[2025-07-27 14:02:56] 2025-07-27 18:02:22,019 | INFO     | mean y: 2261702.7717391304
[2025-07-27 14:02:56] 2025-07-27 18:02:22,020 | INFO     | -- intersect: 1128904296.516821
[2025-07-27 14:02:56] 2025-07-27 18:02:22,020 | INFO     | intersect: 1128904296.516821
[2025-07-27 14:02:56] 2025-07-27 18:02:22,020 | INFO     | chi2: 0.0074709398897890265
[2025-07-27 14:02:56] 2025-07-27 18:02:22,020 | INFO     | -- intersect: 1128904296.516821
[2025-07-27 14:02:56] 2025-07-27 18:02:22,020 | INFO     | current memory leak: -0.64 B/s (using 92 data points, chi2=0.01)
[2025-07-27 14:02:56] 2025-07-27 18:02:22,020 | INFO     | could have reported an average CPU frequency of 2941 MHz (8 samples)
[2025-07-27 14:02:56] 2025-07-27 18:02:22,021 | INFO     | ..............................
[2025-07-27 14:02:56] 2025-07-27 18:02:22,021 | INFO     | . Timing measurements:
[2025-07-27 14:02:56] 2025-07-27 18:02:22,021 | INFO     | . get job = 0 s
[2025-07-27 14:02:56] 2025-07-27 18:02:22,021 | INFO     | . initial setup = 5 s
[2025-07-27 14:02:56] 2025-07-27 18:02:22,021 | INFO     | . payload setup = 19 s
[2025-07-27 14:02:56] 2025-07-27 18:02:22,021 | INFO     | . stage-in = 0 s
[2025-07-27 14:02:56] 2025-07-27 18:02:22,021 | INFO     | . payload execution = 7475 s
[2025-07-27 14:02:56] 2025-07-27 18:02:22,021 | INFO     | . stage-out = 0 s
[2025-07-27 14:02:56] 2025-07-27 18:02:22,021 | INFO     | . log creation = 0 s
[2025-07-27 14:02:56] 2025-07-27 18:02:22,021 | INFO     | ..............................
[2025-07-27 14:02:56] 2025-07-27 18:02:22,103 | INFO     | 
[2025-07-27 14:02:56] 2025-07-27 18:02:22,104 | INFO     | job summary report
[2025-07-27 14:02:56] 2025-07-27 18:02:22,104 | INFO     | --------------------------------------------------
[2025-07-27 14:02:56] 2025-07-27 18:02:22,104 | INFO     | PanDA job id: 6744927828
[2025-07-27 14:02:56] 2025-07-27 18:02:22,104 | INFO     | task id: 45743349
[2025-07-27 14:02:56] 2025-07-27 18:02:22,104 | INFO     | errors: (none)
[2025-07-27 14:02:56] 2025-07-27 18:02:22,104 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 14:02:56] 2025-07-27 18:02:22,104 | INFO     | pilot state: finished 
[2025-07-27 14:02:56] 2025-07-27 18:02:22,104 | INFO     | transexitcode: 0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,104 | INFO     | exeerrorcode: 0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,104 | INFO     | exeerrordiag: 
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | exitcode: 0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | exitmsg: OK
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | cpuconsumptiontime: 40616 s
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | nevents: 400
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | neventsw: 0
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | pid: 1039530
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | pgrp: 1039530
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | corecount: 8
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | event service: False
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | sizes: {0: 2397469, 1: 2397469, 11: 2397497, 12: 2397787, 22: 2397815, 7498: 2425093, 7499: 2425220, 7500: 2434274, 7502: 2434330, 7510: 2434524}
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | --------------------------------------------------
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | 
[2025-07-27 14:02:56] 2025-07-27 18:02:22,105 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 14:02:56] 2025-07-27 18:02:22,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,129 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 14:02:56] 2025-07-27 18:02:22,129 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,129 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 14:02:56] 2025-07-27 18:02:22,129 | INFO     | job 6744927828 has completed (purged errors)
[2025-07-27 14:02:56] 2025-07-27 18:02:22,129 | INFO     | overall cleanup function is called
[2025-07-27 14:02:56] 2025-07-27 18:02:23,007 | INFO     | PID=1031849 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 14:02:56] 2025-07-27 18:02:23,009 | INFO     | .. there are 19 such processes running
[2025-07-27 14:02:56] 2025-07-27 18:02:23,137 | INFO     | --- collectZombieJob: --- 10, [1039530]
[2025-07-27 14:02:56] 2025-07-27 18:02:23,138 | INFO     | zombie collector waiting for pid 1039530
[2025-07-27 14:02:56] 2025-07-27 18:02:23,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 14:02:56] 2025-07-27 18:02:23,138 | INFO     | collected zombie processes
[2025-07-27 14:02:56] 2025-07-27 18:02:23,138 | INFO     | will attempt to kill all subprocesses of pid=1039530
[2025-07-27 14:02:56] 2025-07-27 18:02:23,573 | INFO     | process IDs to be killed: [1039530] (in reverse order)
[2025-07-27 14:02:56] 2025-07-27 18:02:23,709 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 14:02:56] 2025-07-27 18:02:23,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 14:02:56] 2025-07-27 18:02:23,728 | INFO     | did not find any defunct processes belonging to 1039530
[2025-07-27 14:02:56] 2025-07-27 18:02:23,744 | INFO     | did not find any defunct processes belonging to 1039530
[2025-07-27 14:02:56] 2025-07-27 18:02:23,744 | INFO     | ready for new job
[2025-07-27 14:02:56] 2025-07-27 18:02:23,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 14:02:56] 2025-07-27 18:02:23,746 | INFO     | ***************************************
[2025-07-27 14:02:56] 2025-07-27 18:02:23,746 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 14:02:56] 2025-07-27 18:02:23,746 | INFO     | ***************************************
[2025-07-27 14:02:56] 2025-07-27 18:02:23,746 | INFO     | 
[2025-07-27 14:02:56] 2025-07-27 18:02:23,767 | INFO     | architecture information:
[2025-07-27 14:02:56] 2025-07-27 18:02:23,768 | INFO     | executing command: cat /etc/os-release
[2025-07-27 14:02:56] 2025-07-27 18:02:23,801 | INFO     | cat /etc/os-release:
[2025-07-27 14:02:56] NAME="CentOS Linux"
[2025-07-27 14:02:56] VERSION="7 (Core)"
[2025-07-27 14:02:56] ID="centos"
[2025-07-27 14:02:56] ID_LIKE="rhel fedora"
[2025-07-27 14:02:56] VERSION_ID="7"
[2025-07-27 14:02:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 14:02:56] ANSI_COLOR="0;31"
[2025-07-27 14:02:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 14:02:56] HOME_URL="https://www.centos.org/"
[2025-07-27 14:02:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 14:02:56] 
[2025-07-27 14:02:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 14:02:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 14:02:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 14:02:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 14:02:56] 
[2025-07-27 14:02:56] 2025-07-27 18:02:23,801 | INFO     | ***************************************
[2025-07-27 14:02:56] 2025-07-27 18:02:24,305 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 14:02:56] 2025-07-27 18:02:24,329 | INFO     | sufficient remaining disk space (75934728192 B)
[2025-07-27 14:02:56] 2025-07-27 18:02:24,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 14:02:56] 2025-07-27 18:02:24,329 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 14:02:56] 2025-07-27 18:02:24,330 | INFO     | update_server=False
[2025-07-27 14:02:56] 2025-07-27 18:02:24,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 14:02:56] 2025-07-27 18:02:24,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:02:56] 2025-07-27 18:02:24,331 | INFO     | aborting loop
[2025-07-27 14:02:56] 2025-07-27 18:02:24,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 14:02:56] 2025-07-27 18:02:24,913 | INFO     | all data control threads have been joined
[2025-07-27 14:02:56] 2025-07-27 18:02:25,067 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 14:02:56] 2025-07-27 18:02:25,271 | INFO     | all job control threads have been joined
[2025-07-27 14:02:56] 2025-07-27 18:02:25,335 | INFO     | [job] retrieve thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:25,336 | INFO     | [job] job monitor thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:25,463 | INFO     | all payload control threads have been joined
[2025-07-27 14:02:56] 2025-07-27 18:02:25,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:25,919 | INFO     | [data] control thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:26,018 | INFO     | [job] validate thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:26,159 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:26,236 | INFO     | [data] copytool_in thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:26,277 | INFO     | [job] control thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:26,321 | INFO     | [payload] validate_post thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:26,469 | INFO     | [payload] control thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:26,489 | INFO     | [payload] failed_post thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:26,494 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:26,564 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:26,691 | INFO     | [data] copytool_out thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:27,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:02:56] 2025-07-27 18:02:28,123 | INFO     | [job] queue monitor thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:29,075 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 14:02:56] 2025-07-27 18:02:30,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140277040650048)>', '<ExcThread(monitor, started 140276098127616)>']
[2025-07-27 14:02:56] 2025-07-27 18:02:35,599 | INFO     | all workflow threads have been joined
[2025-07-27 14:02:56] 2025-07-27 18:02:35,600 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 14:02:56] 2025-07-27 18:02:35,600 | INFO     | traces error code: 0
[2025-07-27 14:02:56] 2025-07-27 18:02:35,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 14:02:56] 2025-07-27 18:02:55,627 | INFO     | PID=1031849 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 14:02:56] 2025-07-27 18:02:55,627 | INFO     | .. there are 19 such processes running
[2025-07-27 14:02:56] 2025-07-27 18:02:55,627 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 14:02:56] 2025-07-27 18:02:55,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 14:02:56] 2025-07-27 18:02:55,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 14:02:56] 2025-07-27 18:02:55,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 14:02:56] 2025-07-27 18:02:55,628 | INFO     | [monitor] control thread has ended
[2025-07-27 14:02:56] 2025-07-27 18:02:55,795 [wrapper] ==== pilot stdout END ====
[2025-07-27 14:02:56] 2025-07-27 18:02:55,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 14:02:56] 2025-07-27 18:02:55,802 [wrapper] pilotpid: 1031849
[2025-07-27 14:02:56] 2025-07-27 18:02:55,807 [wrapper] Pilot exit status: 0
[2025-07-27 14:02:56] 2025-07-27 18:02:55,832 [wrapper] pandaids: 6744927828
[2025-07-27 14:02:56] 2025-07-27 18:02:55,937 [wrapper] cleanup supervisor_pilot 1627721 1031850
[2025-07-27 14:02:56] 2025-07-27 18:02:55,944 [wrapper] Test setup, not cleaning
[2025-07-27 14:02:56] 2025-07-27 18:02:55,949 [wrapper] apfmon messages muted
[2025-07-27 14:02:56] 2025-07-27 18:02:55,958 [wrapper] ==== wrapper stdout END ====
[2025-07-27 14:02:56] 2025-07-27 18:02:55,968 [wrapper] ==== wrapper stderr END ====
[2025-07-27 14:02:56]  *** Error codes and diagnostics ***
[2025-07-27 14:02:56]     "exeErrorCode": 0,
[2025-07-27 14:02:56]     "exeErrorDiag": "",
[2025-07-27 14:02:56]     "pilotErrorCode": 0,
[2025-07-27 14:02:56]     "pilotErrorDiag": "",
[2025-07-27 14:02:56]  *** Listing of results directory ***
[2025-07-27 14:02:56] total 350072
[2025-07-27 14:02:56] -rwx------. 1 boincer umatlas     36292 Jul 24 16:02 runpilot2-wrapper.sh
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 16:02 queuedata.json
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 16:02 pilot3.tar.gz
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas       100 Jul 27 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 14:02:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 11:56 run_atlas
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas       105 Jul 27 11:56 job.xml
[2025-07-27 14:02:56] -rw-r--r--. 2 boincer umatlas 144380694 Jul 27 11:56 EVNT.45743347._000454.pool.root.1
[2025-07-27 14:02:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 11:56 start_atlas.sh
[2025-07-27 14:02:56] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 11:56 shared
[2025-07-27 14:02:56] -rw-r--r--. 2 boincer umatlas    542876 Jul 27 11:56 input.tar.gz
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas         0 Jul 27 11:56 boinc_lockfile
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas      2560 Jul 27 11:56 pandaJob.out
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas    980101 Jul 27 11:56 agis_schedconf.cvmfs.json
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas   1593052 Jul 27 11:56 agis_ddmendpoints.agis.ALL.json
[2025-07-27 14:02:56] drwx------. 4 boincer umatlas      4096 Jul 27 11:56 pilot3
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas      6932 Jul 27 13:54 init_data.xml
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas 208142585 Jul 27 14:01 HITS.45743349._008579.pool.root.1
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas       529 Jul 27 14:01 boinc_task_state.xml
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas      1032 Jul 27 14:02 memory_monitor_summary.json
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas    328342 Jul 27 14:02 log.45743349._008579.job.log.tgz.1
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas        95 Jul 27 14:02 pilot_heartbeat.json
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas      7769 Jul 27 14:02 heartbeat.json
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 14:02 boinc_mmap_file
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas        27 Jul 27 14:02 wrapper_checkpoint.txt
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas       823 Jul 27 14:02 pilotlog.txt
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas    706229 Jul 27 14:02 log.45743349._008579.job.log.1
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas       357 Jul 27 14:02 output.list
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas       620 Jul 27 14:02 runtime_log
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas   1054720 Jul 27 14:02 result.tar.gz
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 14:02 runtime_log.err
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas       651 Jul 27 14:02 LpIODmqJHz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaVNLDmZIMfPo.diag
[2025-07-27 14:02:56] -rw-r--r--. 1 boincer umatlas     21050 Jul 27 14:02 stderr.txt
[2025-07-27 14:02:56] HITS file was successfully produced:
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas 208142585 Jul 27 14:01 shared/HITS.pool.root.1
[2025-07-27 14:02:56]  *** Contents of shared directory: ***
[2025-07-27 14:02:56] total 345852
[2025-07-27 14:02:56] -rw-r--r--. 2 boincer umatlas 144380694 Jul 27 11:56 ATLAS.root_0
[2025-07-27 14:02:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 11:56 start_atlas.sh
[2025-07-27 14:02:56] -rw-r--r--. 2 boincer umatlas    542876 Jul 27 11:56 input.tar.gz
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas 208142585 Jul 27 14:01 HITS.pool.root.1
[2025-07-27 14:02:56] -rw-------. 1 boincer umatlas   1054720 Jul 27 14:02 result.tar.gz
14:02:57 (1027336): run_atlas exited; CPU time 40803.449270
14:02:57 (1027336): called boinc_finish(0)

</stderr_txt>
]]>

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