Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:10:22 (11533): wrapper (7.7.26015): starting
12:10:22 (11533): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 12:10:22] Arguments: --nthreads 8
[2025-07-27 12:10:22] Threads: 8
[2025-07-27 12:10:22] Checking for CVMFS
[2025-07-27 12:10:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:10:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:10:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:10:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:10:22] 2.11.2.0 2923 95186 80488 148817 1 57 15819495 20275201 1 130560 0 25935212 99.957 7228684 8136 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 12:10:22] CVMFS is ok
[2025-07-27 12:10:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:10:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:10:22] Further information can be found at the LHC@home message board.
[2025-07-27 12:10:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:10:22] Checking for apptainer binary...
[2025-07-27 12:10:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:10:22] Running /usr/bin/apptainer --version
[2025-07-27 12:10:22] apptainer version 1.3.2-1.el7
[2025-07-27 12:10:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:10:24] c-204-28.aglt2.org
[2025-07-27 12:10:24] apptainer works
[2025-07-27 12:10:24] Set ATHENA_PROC_NUMBER=8
[2025-07-27 12:10:24] Set ATHENA_CORE_NUMBER=8
[2025-07-27 12:10:24] Starting ATLAS job with PandaID=6746200075
[2025-07-27 12:10:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 14:45:35]  *** The last 200 lines of the pilot log: ***
[2025-07-27 14:45:35] 2025-07-27 18:45:03,012 | INFO     | chi2: 2.1591793332517315
[2025-07-27 14:45:35] 2025-07-27 18:45:03,013 | INFO     | sufficient remaining disk space (18539872256 B)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,014 | INFO     | sum of square deviations: 984941258.0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,014 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,015 | INFO     | sum of deviations: 20658591901.0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,015 | INFO     | mean x: 1753637126.0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,015 | INFO     | mean y: 2492975.836734694
[2025-07-27 14:45:35] 2025-07-27 18:45:03,016 | INFO     | -- intersect: -36779064740.650475
[2025-07-27 14:45:35] 2025-07-27 18:45:03,016 | INFO     | intersect: -36779064740.650475
[2025-07-27 14:45:35] 2025-07-27 18:45:03,016 | INFO     | chi2: 1.3862521312906324
[2025-07-27 14:45:35] 2025-07-27 18:45:03,017 | INFO     | current chi2=1.3862521312906324 (change=35.79726751075688 %)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,017 | INFO     | sum of square deviations: 887813855.5
[2025-07-27 14:45:35] 2025-07-27 18:45:03,018 | INFO     | sum of deviations: 19953767858.500008
[2025-07-27 14:45:35] 2025-07-27 18:45:03,018 | INFO     | mean x: 1753636973.5
[2025-07-27 14:45:35] 2025-07-27 18:45:03,018 | INFO     | mean y: 2491868.767605634
[2025-07-27 14:45:35] 2025-07-27 18:45:03,018 | INFO     | -- intersect: -39410798271.421616
[2025-07-27 14:45:35] 2025-07-27 18:45:03,019 | INFO     | intersect: -39410798271.421616
[2025-07-27 14:45:35] 2025-07-27 18:45:03,019 | INFO     | chi2: 1.3872939906753634
[2025-07-27 14:45:35] 2025-07-27 18:45:03,019 | INFO     | current chi2=1.3872939906753634 (change=-0.0751565578305736 %)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,019 | INFO     | right removable region: 141
[2025-07-27 14:45:35] 2025-07-27 18:45:03,020 | INFO     | sum of square deviations: 984941258.0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,021 | INFO     | sum of deviations: -10252997852.0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,021 | INFO     | mean x: 1753637431.0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,021 | INFO     | mean y: 2510112.911564626
[2025-07-27 14:45:35] 2025-07-27 18:45:03,021 | INFO     | -- intersect: 18257447315.704422
[2025-07-27 14:45:35] 2025-07-27 18:45:03,022 | INFO     | intersect: 18257447315.704422
[2025-07-27 14:45:35] 2025-07-27 18:45:03,022 | INFO     | chi2: 0.8331233893903928
[2025-07-27 14:45:35] 2025-07-27 18:45:03,022 | INFO     | current chi2=0.8331233893903928 (change=61.41481272258631 %)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,023 | INFO     | sum of square deviations: 887813855.5
[2025-07-27 14:45:35] 2025-07-27 18:45:03,024 | INFO     | sum of deviations: -13020169522.0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,024 | INFO     | mean x: 1753637583.5
[2025-07-27 14:45:35] 2025-07-27 18:45:03,024 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6746200075: 3623904 B (within 2537553920 B limit)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,024 | INFO     | mean y: 2514375.0985915493
[2025-07-27 14:45:35] 2025-07-27 18:45:03,025 | INFO     | -- intersect: 25720358803.71647
[2025-07-27 14:45:35] 2025-07-27 18:45:03,025 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6746200075/HITS.45759456._000038.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,025 | INFO     | intersect: 25720358803.71647
[2025-07-27 14:45:35] 2025-07-27 18:45:03,026 | INFO     | total size of present files: 0 B (workdir size: 3623904 B)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,026 | INFO     | chi2: 0.8001855640227825
[2025-07-27 14:45:35] 2025-07-27 18:45:03,026 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6746200075/HITS.45759456._000038.pool.root.1 since it does not exist
[2025-07-27 14:45:35] 2025-07-27 18:45:03,026 | INFO     | current chi2=0.8001855640227825 (change=3.9535350690023585 %)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,027 | INFO     | left removable region: 20
[2025-07-27 14:45:35] 2025-07-27 18:45:03,027 | INFO     | sum of square deviations: 549294020.0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,028 | INFO     | sum of deviations: -3217877367.9999995
[2025-07-27 14:45:35] 2025-07-27 18:45:03,029 | INFO     | mean x: 1753637553.0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,029 | INFO     | mean y: 2530690.2892561983
[2025-07-27 14:45:35] 2025-07-27 18:45:03,029 | INFO     | -- intersect: 10275700227.932503
[2025-07-27 14:45:35] 2025-07-27 18:45:03,029 | INFO     | intersect: 10275700227.932503
[2025-07-27 14:45:35] 2025-07-27 18:45:03,029 | INFO     | chi2: 0.0022354210866172937
[2025-07-27 14:45:35] 2025-07-27 18:45:03,030 | INFO     | -- intersect: 10275700227.932503
[2025-07-27 14:45:35] 2025-07-27 18:45:03,030 | INFO     | current memory leak: -5.86 B/s (using 121 data points, chi2=0.00)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,030 | INFO     | could have reported an average CPU frequency of 1975 MHz (9 samples)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,031 | INFO     | ..............................
[2025-07-27 14:45:35] 2025-07-27 18:45:03,031 | INFO     | . Timing measurements:
[2025-07-27 14:45:35] 2025-07-27 18:45:03,031 | INFO     | . get job = 0 s
[2025-07-27 14:45:35] 2025-07-27 18:45:03,031 | INFO     | . initial setup = 2 s
[2025-07-27 14:45:35] 2025-07-27 18:45:03,031 | INFO     | . payload setup = 11 s
[2025-07-27 14:45:35] 2025-07-27 18:45:03,032 | INFO     | . stage-in = 0 s
[2025-07-27 14:45:35] 2025-07-27 18:45:03,032 | INFO     | . payload execution = 9223 s
[2025-07-27 14:45:35] 2025-07-27 18:45:03,032 | INFO     | . stage-out = 0 s
[2025-07-27 14:45:35] 2025-07-27 18:45:03,033 | INFO     | . log creation = 0 s
[2025-07-27 14:45:35] 2025-07-27 18:45:03,033 | INFO     | ..............................
[2025-07-27 14:45:35] 2025-07-27 18:45:03,230 | INFO     | number of running child processes to parent process 22757: 1
[2025-07-27 14:45:35] 2025-07-27 18:45:03,230 | INFO     | maximum number of monitored processes: 6
[2025-07-27 14:45:35] 2025-07-27 18:45:03,230 | INFO     | aborting job monitoring since job object (job id=6746200075) has expired
[2025-07-27 14:45:35] 2025-07-27 18:45:03,414 | INFO     | PID=15166 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 14:45:35] 2025-07-27 18:45:03,630 | INFO     | 
[2025-07-27 14:45:35] 2025-07-27 18:45:03,630 | INFO     | job summary report
[2025-07-27 14:45:35] 2025-07-27 18:45:03,630 | INFO     | --------------------------------------------------
[2025-07-27 14:45:35] 2025-07-27 18:45:03,630 | INFO     | PanDA job id: 6746200075
[2025-07-27 14:45:35] 2025-07-27 18:45:03,631 | INFO     | task id: 45759456
[2025-07-27 14:45:35] 2025-07-27 18:45:03,631 | INFO     | errors: (none)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,631 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 14:45:35] 2025-07-27 18:45:03,631 | INFO     | pilot state: finished 
[2025-07-27 14:45:35] 2025-07-27 18:45:03,631 | INFO     | transexitcode: 0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,631 | INFO     | exeerrorcode: 0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,632 | INFO     | exeerrordiag: 
[2025-07-27 14:45:35] 2025-07-27 18:45:03,632 | INFO     | exitcode: 0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,632 | INFO     | exitmsg: OK
[2025-07-27 14:45:35] 2025-07-27 18:45:03,632 | INFO     | cpuconsumptiontime: 69569 s
[2025-07-27 14:45:35] 2025-07-27 18:45:03,632 | INFO     | nevents: 400
[2025-07-27 14:45:35] 2025-07-27 18:45:03,632 | INFO     | neventsw: 0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,633 | INFO     | pid: 22757
[2025-07-27 14:45:35] 2025-07-27 18:45:03,633 | INFO     | pgrp: 22757
[2025-07-27 14:45:35] 2025-07-27 18:45:03,633 | INFO     | corecount: 8
[2025-07-27 14:45:35] 2025-07-27 18:45:03,633 | INFO     | event service: False
[2025-07-27 14:45:35] 2025-07-27 18:45:03,633 | INFO     | sizes: {0: 2397461, 6: 2397723, 11: 2397751, 9238: 2426035, 9239: 2435033, 9240: 2435089, 9246: 2435503}
[2025-07-27 14:45:35] 2025-07-27 18:45:03,633 | INFO     | --------------------------------------------------
[2025-07-27 14:45:35] 2025-07-27 18:45:03,634 | INFO     | 
[2025-07-27 14:45:35] 2025-07-27 18:45:03,634 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 14:45:35] 2025-07-27 18:45:03,661 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,662 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 14:45:35] 2025-07-27 18:45:03,666 | INFO     | job 6746200075 has completed (purged errors)
[2025-07-27 14:45:35] 2025-07-27 18:45:03,666 | INFO     | overall cleanup function is called
[2025-07-27 14:45:35] 2025-07-27 18:45:04,675 | INFO     | --- collectZombieJob: --- 10, [22757]
[2025-07-27 14:45:35] 2025-07-27 18:45:04,676 | INFO     | zombie collector waiting for pid 22757
[2025-07-27 14:45:35] 2025-07-27 18:45:04,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 14:45:35] 2025-07-27 18:45:04,676 | INFO     | collected zombie processes
[2025-07-27 14:45:35] 2025-07-27 18:45:04,676 | INFO     | will attempt to kill all subprocesses of pid=22757
[2025-07-27 14:45:35] 2025-07-27 18:45:04,773 | INFO     | process IDs to be killed: [22757] (in reverse order)
[2025-07-27 14:45:35] 2025-07-27 18:45:04,827 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 14:45:35] 2025-07-27 18:45:04,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 14:45:35] 2025-07-27 18:45:04,833 | INFO     | did not find any defunct processes belonging to 22757
[2025-07-27 14:45:35] 2025-07-27 18:45:04,836 | INFO     | did not find any defunct processes belonging to 22757
[2025-07-27 14:45:35] 2025-07-27 18:45:04,837 | INFO     | ready for new job
[2025-07-27 14:45:35] 2025-07-27 18:45:04,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 14:45:35] 2025-07-27 18:45:04,839 | INFO     | ***************************************
[2025-07-27 14:45:35] 2025-07-27 18:45:04,839 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 14:45:35] 2025-07-27 18:45:04,839 | INFO     | ***************************************
[2025-07-27 14:45:35] 2025-07-27 18:45:04,839 | INFO     | 
[2025-07-27 14:45:35] 2025-07-27 18:45:04,840 | INFO     | architecture information:
[2025-07-27 14:45:35] 2025-07-27 18:45:04,840 | INFO     | executing command: cat /etc/os-release
[2025-07-27 14:45:35] 2025-07-27 18:45:04,857 | INFO     | cat /etc/os-release:
[2025-07-27 14:45:35] NAME="CentOS Linux"
[2025-07-27 14:45:35] VERSION="7 (Core)"
[2025-07-27 14:45:35] ID="centos"
[2025-07-27 14:45:35] ID_LIKE="rhel fedora"
[2025-07-27 14:45:35] VERSION_ID="7"
[2025-07-27 14:45:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 14:45:35] ANSI_COLOR="0;31"
[2025-07-27 14:45:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 14:45:35] HOME_URL="https://www.centos.org/"
[2025-07-27 14:45:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 14:45:35] 
[2025-07-27 14:45:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 14:45:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 14:45:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 14:45:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 14:45:35] 
[2025-07-27 14:45:35] 2025-07-27 18:45:04,858 | INFO     | ***************************************
[2025-07-27 14:45:35] 2025-07-27 18:45:05,361 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 14:45:35] 2025-07-27 18:45:05,381 | INFO     | sufficient remaining disk space (18545115136 B)
[2025-07-27 14:45:35] 2025-07-27 18:45:05,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 14:45:35] 2025-07-27 18:45:05,382 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 14:45:35] 2025-07-27 18:45:05,382 | INFO     | update_server=False
[2025-07-27 14:45:35] 2025-07-27 18:45:05,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 14:45:35] 2025-07-27 18:45:05,733 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 14:45:35] 2025-07-27 18:45:05,734 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 14:45:35] 2025-07-27 18:45:05,734 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:45:35] 2025-07-27 18:45:05,734 | INFO     | will abort loop
[2025-07-27 14:45:35] 2025-07-27 18:45:05,760 | INFO     | all data control threads have been joined
[2025-07-27 14:45:35] 2025-07-27 18:45:05,996 | INFO     | all payload control threads have been joined
[2025-07-27 14:45:35] 2025-07-27 18:45:06,388 | INFO     | [job] retrieve thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:06,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 14:45:35] 2025-07-27 18:45:06,710 | INFO     | all job control threads have been joined
[2025-07-27 14:45:35] 2025-07-27 18:45:06,728 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:06,740 | INFO     | [job] job monitor thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:06,765 | INFO     | [data] control thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:06,827 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:06,828 | INFO     | [data] copytool_in thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:06,980 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:07,002 | INFO     | [payload] control thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:07,315 | INFO     | [payload] validate_post thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:07,362 | INFO     | [payload] failed_post thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:07,592 | INFO     | [job] validate thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:07,652 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:07,715 | INFO     | [job] control thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:07,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 14:45:35] 2025-07-27 18:45:08,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:45:35] 2025-07-27 18:45:08,579 | INFO     | [data] copytool_out thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:09,156 | INFO     | [job] queue monitor thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:11,901 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 14:45:35] 2025-07-27 18:45:13,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500992243520)>', '<ExcThread(monitor, started 140500141053696)>']
[2025-07-27 14:45:35] 2025-07-27 18:45:18,953 | INFO     | all workflow threads have been joined
[2025-07-27 14:45:35] 2025-07-27 18:45:18,953 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 14:45:35] 2025-07-27 18:45:18,959 | INFO     | traces error code: 0
[2025-07-27 14:45:35] 2025-07-27 18:45:18,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 14:45:35] 2025-07-27 18:45:35,631 | INFO     | PID=15166 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 14:45:35] 2025-07-27 18:45:35,631 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 14:45:35] 2025-07-27 18:45:35,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 14:45:35] 2025-07-27 18:45:35,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 14:45:35] 2025-07-27 18:45:35,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 14:45:35] 2025-07-27 18:45:35,632 | INFO     | [monitor] control thread has ended
[2025-07-27 14:45:35] 2025-07-27 18:45:35,732 [wrapper] ==== pilot stdout END ====
[2025-07-27 14:45:35] 2025-07-27 18:45:35,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 14:45:35] 2025-07-27 18:45:35,742 [wrapper] pilotpid: 15166
[2025-07-27 14:45:35] 2025-07-27 18:45:35,747 [wrapper] Pilot exit status: 0
[2025-07-27 14:45:35] 2025-07-27 18:45:35,766 [wrapper] pandaids: 6746200075
[2025-07-27 14:45:35] 2025-07-27 18:45:35,810 [wrapper] cleanup supervisor_pilot 12091 15167
[2025-07-27 14:45:35] 2025-07-27 18:45:35,816 [wrapper] Test setup, not cleaning
[2025-07-27 14:45:35] 2025-07-27 18:45:35,821 [wrapper] apfmon messages muted
[2025-07-27 14:45:35] 2025-07-27 18:45:35,825 [wrapper] ==== wrapper stdout END ====
[2025-07-27 14:45:35] 2025-07-27 18:45:35,830 [wrapper] ==== wrapper stderr END ====
[2025-07-27 14:45:35]  *** Error codes and diagnostics ***
[2025-07-27 14:45:35]     "exeErrorCode": 0,
[2025-07-27 14:45:35]     "exeErrorDiag": "",
[2025-07-27 14:45:35]     "pilotErrorCode": 0,
[2025-07-27 14:45:35]     "pilotErrorDiag": "",
[2025-07-27 14:45:35]  *** Listing of results directory ***
[2025-07-27 14:45:35] total 415308
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 01:42 pilot3.tar.gz
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 01:57 queuedata.json
[2025-07-27 14:45:35] -rwx------ 1 boincer umatlas     36292 Jul 27 01:58 runpilot2-wrapper.sh
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas       100 Jul 27 12:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 14:45:35] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 12:10 run_atlas
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas       105 Jul 27 12:10 job.xml
[2025-07-27 14:45:35] -rw-r--r-- 2 boincer umatlas 242720771 Jul 27 12:10 EVNT.45759449._000002.pool.root.1
[2025-07-27 14:45:35] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:10 start_atlas.sh
[2025-07-27 14:45:35] drwxrwx--x 2 boincer umatlas      4096 Jul 27 12:10 shared
[2025-07-27 14:45:35] -rw-r--r-- 2 boincer umatlas    542886 Jul 27 12:10 input.tar.gz
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas         0 Jul 27 12:10 boinc_lockfile
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas      2554 Jul 27 12:10 pandaJob.out
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas    980101 Jul 27 12:10 agis_schedconf.cvmfs.json
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas   1593052 Jul 27 12:10 agis_ddmendpoints.agis.ALL.json
[2025-07-27 14:45:35] drwx------ 4 boincer umatlas      4096 Jul 27 12:10 pilot3
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas      5825 Jul 27 14:40 init_data.xml
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas 176302969 Jul 27 14:44 HITS.45759456._000038.pool.root.1
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas       529 Jul 27 14:44 boinc_task_state.xml
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas        95 Jul 27 14:44 pilot_heartbeat.json
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas      1051 Jul 27 14:44 memory_monitor_summary.json
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas    349756 Jul 27 14:44 log.45759456._000038.job.log.tgz.1
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas      7838 Jul 27 14:45 heartbeat.json
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 14:45 boinc_mmap_file
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas        27 Jul 27 14:45 wrapper_checkpoint.txt
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas       745 Jul 27 14:45 pilotlog.txt
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas    842547 Jul 27 14:45 log.45759456._000038.job.log.1
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas       357 Jul 27 14:45 output.list
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas       620 Jul 27 14:45 runtime_log
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas   1208320 Jul 27 14:45 result.tar.gz
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 14:45 runtime_log.err
[2025-07-27 14:45:35] -rw------- 1 boincer umatlas       660 Jul 27 14:45 RUJNDmxZ9z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmF31KDmrFbjon.diag
[2025-07-27 14:45:35] -rw-r--r-- 1 boincer umatlas     21487 Jul 27 14:45 stderr.txt
[2025-07-27 14:45:36] HITS file was successfully produced:
[2025-07-27 14:45:36] -rw------- 1 boincer umatlas 176302969 Jul 27 14:44 shared/HITS.pool.root.1
[2025-07-27 14:45:36]  *** Contents of shared directory: ***
[2025-07-27 14:45:36] total 410936
[2025-07-27 14:45:36] -rw-r--r-- 2 boincer umatlas 242720771 Jul 27 12:10 ATLAS.root_0
[2025-07-27 14:45:36] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:10 start_atlas.sh
[2025-07-27 14:45:36] -rw-r--r-- 2 boincer umatlas    542886 Jul 27 12:10 input.tar.gz
[2025-07-27 14:45:36] -rw------- 1 boincer umatlas 176302969 Jul 27 14:44 HITS.pool.root.1
[2025-07-27 14:45:36] -rw------- 1 boincer umatlas   1208320 Jul 27 14:45 result.tar.gz
14:45:37 (11533): run_atlas exited; CPU time 69507.330072
14:45:37 (11533): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN