Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:04:15 (7958): wrapper (7.7.26015): starting
12:04:15 (7958): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 12:04:15] Arguments: --nthreads 12
[2025-07-27 12:04:15] Threads: 12
[2025-07-27 12:04:15] Checking for CVMFS
[2025-07-27 12:04:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:04:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:04:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:04:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:04:16] 2.11.2.0 2913 112218 96364 148817 2 57 15419045 20275200 1 130560 0 38959865 99.971 9819187 10825 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 12:04:16] CVMFS is ok
[2025-07-27 12:04:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:04:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:04:16] Further information can be found at the LHC@home message board.
[2025-07-27 12:04:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:04:16] Checking for apptainer binary...
[2025-07-27 12:04:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:04:16] Running /usr/bin/apptainer --version
[2025-07-27 12:04:16] apptainer version 1.3.2-1.el7
[2025-07-27 12:04:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:04:17] c-205-6.aglt2.org
[2025-07-27 12:04:17] apptainer works
[2025-07-27 12:04:17] Set ATHENA_PROC_NUMBER=12
[2025-07-27 12:04:17] Set ATHENA_CORE_NUMBER=12
[2025-07-27 12:04:17] Starting ATLAS job with PandaID=6747177680
[2025-07-27 12:04:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:31:39]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:31:39]  mtime=0
[2025-07-27 13:31:39]  protocol_id=None
[2025-07-27 13:31:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 13:31:39]  replicas=None
[2025-07-27 13:31:39]  scope=mc23_13p6TeV
[2025-07-27 13:31:39]  status=None
[2025-07-27 13:31:39]  status_code=0
[2025-07-27 13:31:39]  storage_token=
[2025-07-27 13:31:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747177680/log.45758341._000096.job.log.tgz.1
[2025-07-27 13:31:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/71/log.45758341._000096.job.log.tgz.1
[2025-07-27 13:31:39]  workdir=None
[2025-07-27 13:31:39] ]
[2025-07-27 13:31:39] 2025-07-27 17:31:14,374 | INFO     | transferring file log.45758341._000096.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747177680/log.45758341._000096.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 13:31:39] 2025-07-27 17:31:14,374 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747177680/log.45758341._000096.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758341._000096.job
[2025-07-27 13:31:39] 2025-07-27 17:31:14,403 | INFO     | adding to output.list: log.45758341._000096.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/71/log.45758341._000096.job.log.tg
[2025-07-27 13:31:39] 2025-07-27 17:31:14,404 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 13:31:39] 2025-07-27 17:31:14,405 | INFO     | summary of transferred files:
[2025-07-27 13:31:39] 2025-07-27 17:31:14,405 | INFO     |  -- lfn=log.45758341._000096.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 13:31:39] 2025-07-27 17:31:14,405 | INFO     | stage-out finished correctly
[2025-07-27 13:31:39] 2025-07-27 17:31:14,662 | INFO     | monitor loop #390: job 0:6747177680 is in state 'finished'
[2025-07-27 13:31:39] 2025-07-27 17:31:14,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:31:39] 2025-07-27 17:31:17,166 | INFO     | monitor loop #391: job 0:6747177680 is in state 'finished'
[2025-07-27 13:31:39] 2025-07-27 17:31:17,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:31:39] 2025-07-27 17:31:17,880 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 13:31:39] 2025-07-27 17:31:19,404 | INFO     | job 6747177680 has state=finished
[2025-07-27 13:31:39] 2025-07-27 17:31:19,404 | INFO     | preparing for final server update for job 6747177680 in state='finished'
[2025-07-27 13:31:39] 2025-07-27 17:31:19,479 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 13:31:39] 2025-07-27 17:31:19,480 | INFO     | this job has now completed (state=finished)
[2025-07-27 13:31:39] 2025-07-27 17:31:19,480 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 13:31:39] 2025-07-27 17:31:19,480 | INFO     | log transfer has been attempted: DONE
[2025-07-27 13:31:39] 2025-07-27 17:31:19,480 | INFO     | job 6747177680 has finished - writing final server update
[2025-07-27 13:31:39] 2025-07-27 17:31:19,480 | INFO     | total number of processed events: 400 (read)
[2025-07-27 13:31:39] 2025-07-27 17:31:19,481 | INFO     | executing command: lscpu
[2025-07-27 13:31:39] 2025-07-27 17:31:19,504 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 13:31:39] 2025-07-27 17:31:19,674 | INFO     | monitor loop #392: job 0:6747177680 is in state 'finished'
[2025-07-27 13:31:39] 2025-07-27 17:31:19,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:31:39] 2025-07-27 17:31:22,177 | INFO     | monitor loop #393: job 0:6747177680 is in state 'finished'
[2025-07-27 13:31:39] 2025-07-27 17:31:22,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:31:39] 2025-07-27 17:31:24,480 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 13:31:39] 2025-07-27 17:31:24,485 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-27 13:31:39] 2025-07-27 17:31:24,488 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747177680/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:31:39] 2025-07-27 17:31:24,489 | INFO     | extracted standard info from prmon json
[2025-07-27 13:31:39] 2025-07-27 17:31:24,489 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:31:39] 2025-07-27 17:31:24,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:31:39] 2025-07-27 17:31:24,490 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:31:39] 2025-07-27 17:31:24,490 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:31:39] 2025-07-27 17:31:24,492 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:31:39] 2025-07-27 17:31:24,492 | INFO     | sum of square deviations: 147126479.5
[2025-07-27 13:31:39] 2025-07-27 17:31:24,492 | INFO     | sum of deviations: -836630066.9999999
[2025-07-27 13:31:39] 2025-07-27 17:31:24,493 | INFO     | mean x: 1753634954.5
[2025-07-27 13:31:39] 2025-07-27 17:31:24,493 | INFO     | mean y: 2701035.6923076925
[2025-07-27 13:31:39] 2025-07-27 17:31:24,493 | INFO     | -- intersect: 9974690676.597681
[2025-07-27 13:31:39] 2025-07-27 17:31:24,493 | INFO     | intersect: 9974690676.597681
[2025-07-27 13:31:39] 2025-07-27 17:31:24,493 | INFO     | chi2: 0.032987726533493474
[2025-07-27 13:31:39] 2025-07-27 17:31:24,493 | INFO     | -- intersect: 9974690676.597681
[2025-07-27 13:31:39] 2025-07-27 17:31:24,493 | INFO     | current memory leak: -5.69 B/s (using 78 data points, chi2=0.03)
[2025-07-27 13:31:39] 2025-07-27 17:31:24,494 | INFO     | could have reported an average CPU frequency of 2047 MHz (6 samples)
[2025-07-27 13:31:39] 2025-07-27 17:31:24,494 | INFO     | ..............................
[2025-07-27 13:31:39] 2025-07-27 17:31:24,494 | INFO     | . Timing measurements:
[2025-07-27 13:31:39] 2025-07-27 17:31:24,494 | INFO     | . get job = 0 s
[2025-07-27 13:31:39] 2025-07-27 17:31:24,494 | INFO     | . initial setup = 2 s
[2025-07-27 13:31:39] 2025-07-27 17:31:24,494 | INFO     | . payload setup = 9 s
[2025-07-27 13:31:39] 2025-07-27 17:31:24,495 | INFO     | . stage-in = 0 s
[2025-07-27 13:31:39] 2025-07-27 17:31:24,495 | INFO     | . payload execution = 5172 s
[2025-07-27 13:31:39] 2025-07-27 17:31:24,495 | INFO     | . stage-out = 0 s
[2025-07-27 13:31:39] 2025-07-27 17:31:24,495 | INFO     | . log creation = 0 s
[2025-07-27 13:31:39] 2025-07-27 17:31:24,495 | INFO     | ..............................
[2025-07-27 13:31:39] 2025-07-27 17:31:24,580 | INFO     | 
[2025-07-27 13:31:39] 2025-07-27 17:31:24,580 | INFO     | job summary report
[2025-07-27 13:31:39] 2025-07-27 17:31:24,580 | INFO     | --------------------------------------------------
[2025-07-27 13:31:39] 2025-07-27 17:31:24,581 | INFO     | PanDA job id: 6747177680
[2025-07-27 13:31:39] 2025-07-27 17:31:24,581 | INFO     | task id: 45758341
[2025-07-27 13:31:39] 2025-07-27 17:31:24,581 | INFO     | errors: (none)
[2025-07-27 13:31:39] 2025-07-27 17:31:24,581 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:31:39] 2025-07-27 17:31:24,581 | INFO     | pilot state: finished 
[2025-07-27 13:31:39] 2025-07-27 17:31:24,581 | INFO     | transexitcode: 0
[2025-07-27 13:31:39] 2025-07-27 17:31:24,582 | INFO     | exeerrorcode: 0
[2025-07-27 13:31:39] 2025-07-27 17:31:24,582 | INFO     | exeerrordiag: 
[2025-07-27 13:31:39] 2025-07-27 17:31:24,582 | INFO     | exitcode: 0
[2025-07-27 13:31:39] 2025-07-27 17:31:24,582 | INFO     | exitmsg: OK
[2025-07-27 13:31:39] 2025-07-27 17:31:24,582 | INFO     | cpuconsumptiontime: 57306 s
[2025-07-27 13:31:39] 2025-07-27 17:31:24,582 | INFO     | nevents: 400
[2025-07-27 13:31:39] 2025-07-27 17:31:24,583 | INFO     | neventsw: 0
[2025-07-27 13:31:39] 2025-07-27 17:31:24,583 | INFO     | pid: 18928
[2025-07-27 13:31:39] 2025-07-27 17:31:24,583 | INFO     | pgrp: 18928
[2025-07-27 13:31:39] 2025-07-27 17:31:24,583 | INFO     | corecount: 12
[2025-07-27 13:31:39] 2025-07-27 17:31:24,583 | INFO     | event service: False
[2025-07-27 13:31:39] 2025-07-27 17:31:24,583 | INFO     | sizes: {0: 2397291, 1: 2397490, 5: 2397752, 11: 2397808, 5185: 2424131, 5186: 2424130, 5188: 2433312, 5191: 2433368, 5198: 2433562}
[2025-07-27 13:31:39] 2025-07-27 17:31:24,584 | INFO     | --------------------------------------------------
[2025-07-27 13:31:39] 2025-07-27 17:31:24,584 | INFO     | 
[2025-07-27 13:31:39] 2025-07-27 17:31:24,584 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 13:31:39] 2025-07-27 17:31:24,608 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,609 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,609 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,612 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:31:39] 2025-07-27 17:31:24,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,612 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:31:39] 2025-07-27 17:31:24,612 | INFO     | job 6747177680 has completed (purged errors)
[2025-07-27 13:31:39] 2025-07-27 17:31:24,613 | INFO     | overall cleanup function is called
[2025-07-27 13:31:39] 2025-07-27 17:31:25,621 | INFO     | --- collectZombieJob: --- 10, [18928]
[2025-07-27 13:31:39] 2025-07-27 17:31:25,622 | INFO     | zombie collector waiting for pid 18928
[2025-07-27 13:31:39] 2025-07-27 17:31:25,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:31:39] 2025-07-27 17:31:25,622 | INFO     | collected zombie processes
[2025-07-27 13:31:39] 2025-07-27 17:31:25,622 | INFO     | will attempt to kill all subprocesses of pid=18928
[2025-07-27 13:31:39] 2025-07-27 17:31:25,714 | INFO     | process IDs to be killed: [18928] (in reverse order)
[2025-07-27 13:31:39] 2025-07-27 17:31:25,766 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:31:39] 2025-07-27 17:31:25,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:31:39] 2025-07-27 17:31:25,770 | INFO     | did not find any defunct processes belonging to 18928
[2025-07-27 13:31:39] 2025-07-27 17:31:25,772 | INFO     | did not find any defunct processes belonging to 18928
[2025-07-27 13:31:39] 2025-07-27 17:31:25,772 | INFO     | ready for new job
[2025-07-27 13:31:39] 2025-07-27 17:31:25,772 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:31:39] 2025-07-27 17:31:25,774 | INFO     | ***************************************
[2025-07-27 13:31:39] 2025-07-27 17:31:25,774 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:31:39] 2025-07-27 17:31:25,774 | INFO     | ***************************************
[2025-07-27 13:31:39] 2025-07-27 17:31:25,774 | INFO     | 
[2025-07-27 13:31:39] 2025-07-27 17:31:25,775 | INFO     | architecture information:
[2025-07-27 13:31:39] 2025-07-27 17:31:25,775 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:31:39] 2025-07-27 17:31:25,790 | INFO     | cat /etc/os-release:
[2025-07-27 13:31:39] NAME="CentOS Linux"
[2025-07-27 13:31:39] VERSION="7 (Core)"
[2025-07-27 13:31:39] ID="centos"
[2025-07-27 13:31:39] ID_LIKE="rhel fedora"
[2025-07-27 13:31:39] VERSION_ID="7"
[2025-07-27 13:31:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:31:39] ANSI_COLOR="0;31"
[2025-07-27 13:31:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:31:39] HOME_URL="https://www.centos.org/"
[2025-07-27 13:31:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:31:39] 
[2025-07-27 13:31:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:31:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:31:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:31:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:31:39] 
[2025-07-27 13:31:39] 2025-07-27 17:31:25,790 | INFO     | ***************************************
[2025-07-27 13:31:39] 2025-07-27 17:31:26,293 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 13:31:39] 2025-07-27 17:31:26,310 | INFO     | sufficient remaining disk space (29354885120 B)
[2025-07-27 13:31:39] 2025-07-27 17:31:26,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:31:39] 2025-07-27 17:31:26,311 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:31:39] 2025-07-27 17:31:26,311 | INFO     | update_server=False
[2025-07-27 13:31:39] 2025-07-27 17:31:26,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:31:39] 2025-07-27 17:31:26,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:31:39] 2025-07-27 17:31:26,312 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 13:31:39] 2025-07-27 17:31:26,312 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:31:39] 2025-07-27 17:31:26,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:31:39] 2025-07-27 17:31:26,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:31:39] 2025-07-27 17:31:26,313 | INFO     | aborting loop
[2025-07-27 13:31:39] 2025-07-27 17:31:26,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:31:39] 2025-07-27 17:31:26,478 | INFO     | all payload control threads have been joined
[2025-07-27 13:31:39] 2025-07-27 17:31:26,982 | INFO     | all data control threads have been joined
[2025-07-27 13:31:39] 2025-07-27 17:31:27,296 | INFO     | all job control threads have been joined
[2025-07-27 13:31:39] 2025-07-27 17:31:27,317 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:27,317 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:27,318 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:27,376 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:27,484 | INFO     | [payload] control thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:27,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:31:39] 2025-07-27 17:31:27,660 | INFO     | [job] validate thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:27,976 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:27,987 | INFO     | [data] control thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:28,022 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:28,128 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:28,137 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:28,142 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:28,301 | INFO     | [job] control thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:28,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:31:39] 2025-07-27 17:31:28,626 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:29,517 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:32,475 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:31:39] 2025-07-27 17:31:34,464 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766163580736)>', '<ExcThread(monitor, started 139765131237120)>']
[2025-07-27 13:31:39] 2025-07-27 17:31:35,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:31:39] 2025-07-27 17:31:35,358 | INFO     | [monitor] control thread has ended
[2025-07-27 13:31:39] 2025-07-27 17:31:39,468 | INFO     | all workflow threads have been joined
[2025-07-27 13:31:39] 2025-07-27 17:31:39,468 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:31:39] 2025-07-27 17:31:39,469 | INFO     | traces error code: 0
[2025-07-27 13:31:39] 2025-07-27 17:31:39,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:31:39] 2025-07-27 17:31:39,558 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:31:39] 2025-07-27 17:31:39,562 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:31:39] 2025-07-27 17:31:39,565 [wrapper] pilotpid: 11551
[2025-07-27 13:31:39] 2025-07-27 17:31:39,568 [wrapper] Pilot exit status: 0
[2025-07-27 13:31:39] 2025-07-27 17:31:39,583 [wrapper] pandaids: 6747177680
[2025-07-27 13:31:39] 2025-07-27 17:31:39,621 [wrapper] cleanup supervisor_pilot 31931 11552
[2025-07-27 13:31:39] 2025-07-27 17:31:39,625 [wrapper] Test setup, not cleaning
[2025-07-27 13:31:39] 2025-07-27 17:31:39,629 [wrapper] apfmon messages muted
[2025-07-27 13:31:39] 2025-07-27 17:31:39,633 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:31:39] 2025-07-27 17:31:39,636 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:31:39]  *** Error codes and diagnostics ***
[2025-07-27 13:31:39]     "exeErrorCode": 0,
[2025-07-27 13:31:39]     "exeErrorDiag": "",
[2025-07-27 13:31:39]     "pilotErrorCode": 0,
[2025-07-27 13:31:39]     "pilotErrorDiag": "",
[2025-07-27 13:31:39]  *** Listing of results directory ***
[2025-07-27 13:31:39] total 413624
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 06:10 pilot3.tar.gz
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 06:15 queuedata.json
[2025-07-27 13:31:39] -rwx------ 1 boincer umatlas     36292 Jul 27 06:16 runpilot2-wrapper.sh
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas       100 Jul 27 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:31:39] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 12:04 run_atlas
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas       105 Jul 27 12:04 job.xml
[2025-07-27 13:31:39] -rw-r--r-- 2 boincer umatlas 244913984 Jul 27 12:04 EVNT.45758338._000004.pool.root.1
[2025-07-27 13:31:39] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:04 start_atlas.sh
[2025-07-27 13:31:39] drwxrwx--x 2 boincer umatlas      4096 Jul 27 12:04 shared
[2025-07-27 13:31:39] -rw-r--r-- 2 boincer umatlas    542882 Jul 27 12:04 input.tar.gz
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas         0 Jul 27 12:04 boinc_lockfile
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas      2555 Jul 27 12:04 pandaJob.out
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas    980101 Jul 27 12:04 agis_schedconf.cvmfs.json
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas   1593052 Jul 27 12:04 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:31:39] drwx------ 4 boincer umatlas      4096 Jul 27 12:04 pilot3
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas        95 Jul 27 13:30 pilot_heartbeat.json
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas 173013327 Jul 27 13:30 HITS.45758341._000096.pool.root.1
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas      5867 Jul 27 13:30 init_data.xml
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas       529 Jul 27 13:30 boinc_task_state.xml
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas      1061 Jul 27 13:31 memory_monitor_summary.json
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas        27 Jul 27 13:31 wrapper_checkpoint.txt
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 13:31 boinc_mmap_file
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas    380642 Jul 27 13:31 log.45758341._000096.job.log.tgz.1
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas      7836 Jul 27 13:31 heartbeat.json
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas      4480 Jul 27 13:31 pilotlog.txt
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas    492789 Jul 27 13:31 log.45758341._000096.job.log.1
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas       357 Jul 27 13:31 output.list
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas       620 Jul 27 13:31 runtime_log
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas    890880 Jul 27 13:31 result.tar.gz
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas       658 Jul 27 13:31 wUmNDm9bD07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeyULDmX08mqm.diag
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas      8657 Jul 27 13:31 runtime_log.err
[2025-07-27 13:31:39] -rw-r--r-- 1 boincer umatlas     21696 Jul 27 13:31 stderr.txt
[2025-07-27 13:31:39] HITS file was successfully produced:
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas 173013327 Jul 27 13:30 shared/HITS.pool.root.1
[2025-07-27 13:31:39]  *** Contents of shared directory: ***
[2025-07-27 13:31:39] total 409560
[2025-07-27 13:31:39] -rw-r--r-- 2 boincer umatlas 244913984 Jul 27 12:04 ATLAS.root_0
[2025-07-27 13:31:39] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:04 start_atlas.sh
[2025-07-27 13:31:39] -rw-r--r-- 2 boincer umatlas    542882 Jul 27 12:04 input.tar.gz
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas 173013327 Jul 27 13:30 HITS.pool.root.1
[2025-07-27 13:31:39] -rw------- 1 boincer umatlas    890880 Jul 27 13:31 result.tar.gz
13:31:40 (7958): run_atlas exited; CPU time 57277.607600
13:31:40 (7958): called boinc_finish(0)

</stderr_txt>
]]>

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