Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:42:40 (3811): wrapper (7.7.26015): starting
11:42:40 (3811): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 11:42:40] Arguments: --nthreads 8
[2025-07-27 11:42:40] Threads: 8
[2025-07-27 11:42:40] Checking for CVMFS
[2025-07-27 11:42:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 11:42:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 11:42:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 11:42:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 11:42:41] 2.11.2.0 2944 112126 105720 148817 3 57 12633101 20275200 1 130560 0 29963599 99.953 11158469 11121 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 11:42:41] CVMFS is ok
[2025-07-27 11:42:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 11:42:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 11:42:41] Further information can be found at the LHC@home message board.
[2025-07-27 11:42:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:42:41] Checking for apptainer binary...
[2025-07-27 11:42:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 11:42:41] Running /usr/bin/apptainer --version
[2025-07-27 11:42:41] apptainer version 1.3.2-1.el7
[2025-07-27 11:42:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:42:43] c-204-38.aglt2.org
[2025-07-27 11:42:43] apptainer works
[2025-07-27 11:42:43] Set ATHENA_PROC_NUMBER=8
[2025-07-27 11:42:43] Set ATHENA_CORE_NUMBER=8
[2025-07-27 11:42:43] Starting ATLAS job with PandaID=6747411990
[2025-07-27 11:42:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 14:05:15]  *** The last 200 lines of the pilot log: ***
[2025-07-27 14:05:15] 2025-07-27 18:04:38,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 14:05:15] 2025-07-27 18:04:40,628 | INFO     | PID=7410 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 14:05:15] 2025-07-27 18:04:40,666 | INFO     | monitor loop #627: job 0:6747411990 is in state 'finished'
[2025-07-27 14:05:15] 2025-07-27 18:04:40,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 14:05:15] 2025-07-27 18:04:42,707 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 14:05:15] 2025-07-27 18:04:42,710 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-07-27 14:05:15] 2025-07-27 18:04:42,712 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747411990/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 14:05:15] 2025-07-27 18:04:42,713 | INFO     | extracted standard info from prmon json
[2025-07-27 14:05:15] 2025-07-27 18:04:42,713 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 14:05:15] 2025-07-27 18:04:42,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 14:05:15] 2025-07-27 18:04:42,714 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 14:05:15] 2025-07-27 18:04:42,714 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 14:05:15] 2025-07-27 18:04:42,717 | INFO     | fitting pss+swap vs Time
[2025-07-27 14:05:15] 2025-07-27 18:04:42,717 | INFO     | sum of square deviations: 832722590.0
[2025-07-27 14:05:15] 2025-07-27 18:04:42,718 | INFO     | sum of deviations: 27339895.000001617
[2025-07-27 14:05:15] 2025-07-27 18:04:42,718 | INFO     | mean x: 1753635220.0
[2025-07-27 14:05:15] 2025-07-27 18:04:42,718 | INFO     | mean y: 2520745.7913669064
[2025-07-27 14:05:15] 2025-07-27 18:04:42,718 | INFO     | -- intersect: -55054493.980986014
[2025-07-27 14:05:15] 2025-07-27 18:04:42,718 | INFO     | intersect: -55054493.980986014
[2025-07-27 14:05:15] 2025-07-27 18:04:42,719 | INFO     | chi2: 1.5661661887324119
[2025-07-27 14:05:15] 2025-07-27 18:04:42,719 | INFO     | sum of square deviations: 746051197.5
[2025-07-27 14:05:15] 2025-07-27 18:04:42,720 | INFO     | sum of deviations: 214643811.00000584
[2025-07-27 14:05:15] 2025-07-27 18:04:42,720 | INFO     | mean x: 1753635067.5
[2025-07-27 14:05:15] 2025-07-27 18:04:42,720 | INFO     | mean y: 2521072.4925373136
[2025-07-27 14:05:15] 2025-07-27 18:04:42,720 | INFO     | -- intersect: -502011210.6172321
[2025-07-27 14:05:15] 2025-07-27 18:04:42,720 | INFO     | intersect: -502011210.6172321
[2025-07-27 14:05:15] 2025-07-27 18:04:42,720 | INFO     | chi2: 1.566881561642569
[2025-07-27 14:05:15] 2025-07-27 18:04:42,721 | INFO     | current chi2=1.566881561642569 (change=-0.045676692250406166 %)
[2025-07-27 14:05:15] 2025-07-27 18:04:42,721 | INFO     | right removable region: 133
[2025-07-27 14:05:15] 2025-07-27 18:04:42,721 | INFO     | sum of square deviations: 746051197.5
[2025-07-27 14:05:15] 2025-07-27 18:04:42,722 | INFO     | sum of deviations: -20313011590.000004
[2025-07-27 14:05:15] 2025-07-27 18:04:42,722 | INFO     | mean x: 1753635372.5
[2025-07-27 14:05:15] 2025-07-27 18:04:42,722 | INFO     | mean y: 2555931.552238806
[2025-07-27 14:05:15] 2025-07-27 18:04:42,722 | INFO     | -- intersect: 47749434115.77561
[2025-07-27 14:05:15] 2025-07-27 18:04:42,722 | INFO     | intersect: 47749434115.77561
[2025-07-27 14:05:15] 2025-07-27 18:04:42,722 | INFO     | chi2: 0.13865264841391303
[2025-07-27 14:05:15] 2025-07-27 18:04:42,723 | INFO     | current chi2=0.13865264841391303 (change=91.1470028269393 %)
[2025-07-27 14:05:15] 2025-07-27 18:04:42,723 | INFO     | sum of square deviations: 665612480.0
[2025-07-27 14:05:15] 2025-07-27 18:04:42,723 | INFO     | sum of deviations: -18051395598.000004
[2025-07-27 14:05:15] 2025-07-27 18:04:42,724 | INFO     | mean x: 1753635525.0
[2025-07-27 14:05:15] 2025-07-27 18:04:42,724 | INFO     | mean y: 2551559.5503875967
[2025-07-27 14:05:15] 2025-07-27 18:04:42,724 | INFO     | -- intersect: 47561107848.160576
[2025-07-27 14:05:15] 2025-07-27 18:04:42,724 | INFO     | intersect: 47561107848.160576
[2025-07-27 14:05:15] 2025-07-27 18:04:42,724 | INFO     | chi2: 0.12699520955615354
[2025-07-27 14:05:15] 2025-07-27 18:04:42,724 | INFO     | current chi2=0.12699520955615354 (change=8.407656825248017 %)
[2025-07-27 14:05:15] 2025-07-27 18:04:42,724 | INFO     | left removable region: 20
[2025-07-27 14:05:15] 2025-07-27 18:04:42,725 | INFO     | sum of square deviations: 447383272.0
[2025-07-27 14:05:15] 2025-07-27 18:04:42,725 | INFO     | sum of deviations: -8846251658.999998
[2025-07-27 14:05:15] 2025-07-27 18:04:42,725 | INFO     | mean x: 1753635647.0
[2025-07-27 14:05:15] 2025-07-27 18:04:42,725 | INFO     | mean y: 2533898.1592920353
[2025-07-27 14:05:15] 2025-07-27 18:04:42,726 | INFO     | -- intersect: 34677729021.58198
[2025-07-27 14:05:15] 2025-07-27 18:04:42,726 | INFO     | intersect: 34677729021.58198
[2025-07-27 14:05:15] 2025-07-27 18:04:42,726 | INFO     | chi2: 0.0952551826466849
[2025-07-27 14:05:15] 2025-07-27 18:04:42,726 | INFO     | -- intersect: 34677729021.58198
[2025-07-27 14:05:15] 2025-07-27 18:04:42,726 | INFO     | current memory leak: -19.77 B/s (using 113 data points, chi2=0.10)
[2025-07-27 14:05:15] 2025-07-27 18:04:42,727 | INFO     | could have reported an average CPU frequency of 1997 MHz (8 samples)
[2025-07-27 14:05:15] 2025-07-27 18:04:42,727 | INFO     | ..............................
[2025-07-27 14:05:15] 2025-07-27 18:04:42,727 | INFO     | . Timing measurements:
[2025-07-27 14:05:15] 2025-07-27 18:04:42,727 | INFO     | . get job = 0 s
[2025-07-27 14:05:15] 2025-07-27 18:04:42,727 | INFO     | . initial setup = 2 s
[2025-07-27 14:05:15] 2025-07-27 18:04:42,727 | INFO     | . payload setup = 11 s
[2025-07-27 14:05:15] 2025-07-27 18:04:42,727 | INFO     | . stage-in = 0 s
[2025-07-27 14:05:15] 2025-07-27 18:04:42,728 | INFO     | . payload execution = 8462 s
[2025-07-27 14:05:15] 2025-07-27 18:04:42,728 | INFO     | . stage-out = 0 s
[2025-07-27 14:05:15] 2025-07-27 18:04:42,728 | INFO     | . log creation = 0 s
[2025-07-27 14:05:15] 2025-07-27 18:04:42,728 | INFO     | ..............................
[2025-07-27 14:05:15] 2025-07-27 18:04:43,286 | INFO     | 
[2025-07-27 14:05:15] 2025-07-27 18:04:43,286 | INFO     | job summary report
[2025-07-27 14:05:15] 2025-07-27 18:04:43,287 | INFO     | --------------------------------------------------
[2025-07-27 14:05:15] 2025-07-27 18:04:43,287 | INFO     | PanDA job id: 6747411990
[2025-07-27 14:05:15] 2025-07-27 18:04:43,287 | INFO     | task id: 45743349
[2025-07-27 14:05:15] 2025-07-27 18:04:43,287 | INFO     | errors: (none)
[2025-07-27 14:05:15] 2025-07-27 18:04:43,287 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 14:05:15] 2025-07-27 18:04:43,288 | INFO     | pilot state: finished 
[2025-07-27 14:05:15] 2025-07-27 18:04:43,288 | INFO     | transexitcode: 0
[2025-07-27 14:05:15] 2025-07-27 18:04:43,288 | INFO     | exeerrorcode: 0
[2025-07-27 14:05:15] 2025-07-27 18:04:43,288 | INFO     | exeerrordiag: 
[2025-07-27 14:05:15] 2025-07-27 18:04:43,288 | INFO     | exitcode: 0
[2025-07-27 14:05:15] 2025-07-27 18:04:43,288 | INFO     | exitmsg: OK
[2025-07-27 14:05:15] 2025-07-27 18:04:43,289 | INFO     | cpuconsumptiontime: 62895 s
[2025-07-27 14:05:15] 2025-07-27 18:04:43,289 | INFO     | nevents: 400
[2025-07-27 14:05:15] 2025-07-27 18:04:43,289 | INFO     | neventsw: 0
[2025-07-27 14:05:15] 2025-07-27 18:04:43,289 | INFO     | pid: 13934
[2025-07-27 14:05:15] 2025-07-27 18:04:43,289 | INFO     | pgrp: 13934
[2025-07-27 14:05:15] 2025-07-27 18:04:43,289 | INFO     | corecount: 8
[2025-07-27 14:05:15] 2025-07-27 18:04:43,290 | INFO     | event service: False
[2025-07-27 14:05:15] 2025-07-27 18:04:43,290 | INFO     | sizes: {0: 2397303, 1: 2397502, 7: 2397764, 12: 2397792, 8477: 2425625, 8479: 2434807, 8488: 2434945}
[2025-07-27 14:05:15] 2025-07-27 18:04:43,290 | INFO     | --------------------------------------------------
[2025-07-27 14:05:15] 2025-07-27 18:04:43,290 | INFO     | 
[2025-07-27 14:05:15] 2025-07-27 18:04:43,290 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 14:05:15] 2025-07-27 18:04:43,319 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,319 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,319 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,320 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,321 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,321 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,322 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,322 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,322 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 14:05:15] 2025-07-27 18:04:43,322 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,322 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 14:05:15] 2025-07-27 18:04:43,323 | INFO     | job 6747411990 has completed (purged errors)
[2025-07-27 14:05:15] 2025-07-27 18:04:43,323 | INFO     | overall cleanup function is called
[2025-07-27 14:05:15] 2025-07-27 18:04:44,328 | INFO     | --- collectZombieJob: --- 10, [13934]
[2025-07-27 14:05:15] 2025-07-27 18:04:44,328 | INFO     | zombie collector waiting for pid 13934
[2025-07-27 14:05:15] 2025-07-27 18:04:44,329 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 14:05:15] 2025-07-27 18:04:44,329 | INFO     | collected zombie processes
[2025-07-27 14:05:15] 2025-07-27 18:04:44,329 | INFO     | will attempt to kill all subprocesses of pid=13934
[2025-07-27 14:05:15] 2025-07-27 18:04:44,426 | INFO     | process IDs to be killed: [13934] (in reverse order)
[2025-07-27 14:05:15] 2025-07-27 18:04:44,484 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 14:05:15] 2025-07-27 18:04:44,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 14:05:15] 2025-07-27 18:04:44,488 | INFO     | did not find any defunct processes belonging to 13934
[2025-07-27 14:05:15] 2025-07-27 18:04:44,492 | INFO     | did not find any defunct processes belonging to 13934
[2025-07-27 14:05:15] 2025-07-27 18:04:44,492 | INFO     | ready for new job
[2025-07-27 14:05:15] 2025-07-27 18:04:44,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 14:05:15] 2025-07-27 18:04:44,494 | INFO     | ***************************************
[2025-07-27 14:05:15] 2025-07-27 18:04:44,495 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 14:05:15] 2025-07-27 18:04:44,495 | INFO     | ***************************************
[2025-07-27 14:05:15] 2025-07-27 18:04:44,495 | INFO     | 
[2025-07-27 14:05:15] 2025-07-27 18:04:44,495 | INFO     | architecture information:
[2025-07-27 14:05:15] 2025-07-27 18:04:44,496 | INFO     | executing command: cat /etc/os-release
[2025-07-27 14:05:15] 2025-07-27 18:04:44,513 | INFO     | cat /etc/os-release:
[2025-07-27 14:05:15] NAME="CentOS Linux"
[2025-07-27 14:05:15] VERSION="7 (Core)"
[2025-07-27 14:05:15] ID="centos"
[2025-07-27 14:05:15] ID_LIKE="rhel fedora"
[2025-07-27 14:05:15] VERSION_ID="7"
[2025-07-27 14:05:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 14:05:15] ANSI_COLOR="0;31"
[2025-07-27 14:05:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 14:05:15] HOME_URL="https://www.centos.org/"
[2025-07-27 14:05:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 14:05:15] 
[2025-07-27 14:05:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 14:05:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 14:05:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 14:05:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 14:05:15] 
[2025-07-27 14:05:15] 2025-07-27 18:04:44,514 | INFO     | ***************************************
[2025-07-27 14:05:15] 2025-07-27 18:04:45,017 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 14:05:15] 2025-07-27 18:04:45,038 | INFO     | sufficient remaining disk space (18545115136 B)
[2025-07-27 14:05:15] 2025-07-27 18:04:45,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 14:05:15] 2025-07-27 18:04:45,039 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 14:05:15] 2025-07-27 18:04:45,039 | INFO     | update_server=False
[2025-07-27 14:05:15] 2025-07-27 18:04:45,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 14:05:15] 2025-07-27 18:04:45,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 14:05:15] 2025-07-27 18:04:45,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:05:15] 2025-07-27 18:04:45,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 14:05:15] 2025-07-27 18:04:45,041 | INFO     | aborting loop
[2025-07-27 14:05:15] 2025-07-27 18:04:45,073 | INFO     | all payload control threads have been joined
[2025-07-27 14:05:15] 2025-07-27 18:04:45,267 | INFO     | all job control threads have been joined
[2025-07-27 14:05:15] 2025-07-27 18:04:45,928 | INFO     | all data control threads have been joined
[2025-07-27 14:05:15] 2025-07-27 18:04:46,045 | INFO     | [job] retrieve thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:46,047 | INFO     | [job] job monitor thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:46,051 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:46,078 | INFO     | [payload] control thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:46,171 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:46,195 | INFO     | [data] copytool_in thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:46,272 | INFO     | [job] control thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:46,504 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:46,539 | INFO     | [payload] failed_post thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:46,934 | INFO     | [data] control thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:47,042 | INFO     | [data] copytool_out thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:47,205 | INFO     | [job] validate thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:47,495 | INFO     | [payload] validate_post thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:47,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:05:15] 2025-07-27 18:04:48,839 | INFO     | [job] queue monitor thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:49,046 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:55,433 | INFO     | job.realtimelogging is not enabled
[2025-07-27 14:05:15] 2025-07-27 18:04:56,437 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 14:05:15] 2025-07-27 18:04:57,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140479914964800)>', '<ExcThread(monitor, started 140479018546944)>']
[2025-07-27 14:05:15] 2025-07-27 18:05:02,242 | INFO     | all workflow threads have been joined
[2025-07-27 14:05:15] 2025-07-27 18:05:02,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 14:05:15] 2025-07-27 18:05:02,251 | INFO     | traces error code: 0
[2025-07-27 14:05:15] 2025-07-27 18:05:02,253 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 14:05:15] 2025-07-27 18:05:14,853 | INFO     | PID=7410 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 14:05:15] 2025-07-27 18:05:14,854 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 14:05:15] 2025-07-27 18:05:14,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 14:05:15] 2025-07-27 18:05:14,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 14:05:15] 2025-07-27 18:05:14,855 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 14:05:15] 2025-07-27 18:05:14,855 | INFO     | [monitor] control thread has ended
[2025-07-27 14:05:15] 2025-07-27 18:05:14,984 [wrapper] ==== pilot stdout END ====
[2025-07-27 14:05:15] 2025-07-27 18:05:14,989 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 14:05:15] 2025-07-27 18:05:14,992 [wrapper] pilotpid: 7410
[2025-07-27 14:05:15] 2025-07-27 18:05:14,997 [wrapper] Pilot exit status: 0
[2025-07-27 14:05:15] 2025-07-27 18:05:15,016 [wrapper] pandaids: 6747411990
[2025-07-27 14:05:15] 2025-07-27 18:05:15,063 [wrapper] cleanup supervisor_pilot  3511 7411
[2025-07-27 14:05:15] 2025-07-27 18:05:15,068 [wrapper] Test setup, not cleaning
[2025-07-27 14:05:15] 2025-07-27 18:05:15,073 [wrapper] apfmon messages muted
[2025-07-27 14:05:15] 2025-07-27 18:05:15,078 [wrapper] ==== wrapper stdout END ====
[2025-07-27 14:05:15] 2025-07-27 18:05:15,084 [wrapper] ==== wrapper stderr END ====
[2025-07-27 14:05:15]  *** Error codes and diagnostics ***
[2025-07-27 14:05:15]     "exeErrorCode": 0,
[2025-07-27 14:05:15]     "exeErrorDiag": "",
[2025-07-27 14:05:15]     "pilotErrorCode": 0,
[2025-07-27 14:05:15]     "pilotErrorDiag": "",
[2025-07-27 14:05:15]  *** Listing of results directory ***
[2025-07-27 14:05:15] total 427108
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 09:04 pilot3.tar.gz
[2025-07-27 14:05:15] -rwx------ 1 boincer umatlas     36292 Jul 27 09:28 runpilot2-wrapper.sh
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 09:28 queuedata.json
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas       100 Jul 27 11:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 14:05:15] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 11:42 run_atlas
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas       105 Jul 27 11:42 job.xml
[2025-07-27 14:05:15] -rw-r--r-- 2 boincer umatlas 227650072 Jul 27 11:42 EVNT.45743347._002716.pool.root.1
[2025-07-27 14:05:15] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 11:42 start_atlas.sh
[2025-07-27 14:05:15] drwxrwx--x 2 boincer umatlas      4096 Jul 27 11:42 shared
[2025-07-27 14:05:15] -rw-r--r-- 2 boincer umatlas    542890 Jul 27 11:42 input.tar.gz
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas         0 Jul 27 11:42 boinc_lockfile
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas      2562 Jul 27 11:42 pandaJob.out
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas    980101 Jul 27 11:42 agis_schedconf.cvmfs.json
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas   1593052 Jul 27 11:42 agis_ddmendpoints.agis.ALL.json
[2025-07-27 14:05:15] drwx------ 4 boincer umatlas      4096 Jul 27 11:42 pilot3
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas      5904 Jul 27 14:02 init_data.xml
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas 203626267 Jul 27 14:03 HITS.45743349._049123.pool.root.1
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas       529 Jul 27 14:03 boinc_task_state.xml
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas      1049 Jul 27 14:04 memory_monitor_summary.json
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas    330368 Jul 27 14:04 log.45743349._049123.job.log.tgz.1
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas      7847 Jul 27 14:04 heartbeat.json
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas        27 Jul 27 14:04 wrapper_checkpoint.txt
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 14:04 boinc_mmap_file
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas        95 Jul 27 14:05 pilot_heartbeat.json
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas       744 Jul 27 14:05 pilotlog.txt
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas    772160 Jul 27 14:05 log.45743349._049123.job.log.1
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas       357 Jul 27 14:05 output.list
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas       620 Jul 27 14:05 runtime_log
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas   1126400 Jul 27 14:05 result.tar.gz
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas       660 Jul 27 14:05 lm0MDmLbG07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBPVLDmxvvksn.diag
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 14:05 runtime_log.err
[2025-07-27 14:05:15] -rw-r--r-- 1 boincer umatlas     21227 Jul 27 14:05 stderr.txt
[2025-07-27 14:05:15] HITS file was successfully produced:
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas 203626267 Jul 27 14:03 shared/HITS.pool.root.1
[2025-07-27 14:05:15]  *** Contents of shared directory: ***
[2025-07-27 14:05:15] total 422824
[2025-07-27 14:05:15] -rw-r--r-- 2 boincer umatlas 227650072 Jul 27 11:42 ATLAS.root_0
[2025-07-27 14:05:15] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 11:42 start_atlas.sh
[2025-07-27 14:05:15] -rw-r--r-- 2 boincer umatlas    542890 Jul 27 11:42 input.tar.gz
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas 203626267 Jul 27 14:03 HITS.pool.root.1
[2025-07-27 14:05:15] -rw------- 1 boincer umatlas   1126400 Jul 27 14:05 result.tar.gz
14:05:17 (3811): run_atlas exited; CPU time 62845.578823
14:05:17 (3811): called boinc_finish(0)

</stderr_txt>
]]>

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