Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:41:33 (1241646): wrapper (7.7.26015): starting
11:41:33 (1241646): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 11:41:33] Arguments: --nthreads 8
[2025-07-27 11:41:33] Threads: 8
[2025-07-27 11:41:33] Checking for CVMFS
[2025-07-27 11:41:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 11:41:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 11:41:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 11:41:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 11:41:33] 2.13.1.0 1630706 13124 236052 148817 1 594 35467411 40960000 21713 16776704 0 53264011 99.694 87165077 40018 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 11:41:33] CVMFS is ok
[2025-07-27 11:41:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 11:41:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 11:41:33] Further information can be found at the LHC@home message board.
[2025-07-27 11:41:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:41:33] Checking for apptainer binary...
[2025-07-27 11:41:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 11:41:33] Running /usr/bin/apptainer --version
[2025-07-27 11:41:34] apptainer version 1.4.1-1.el9
[2025-07-27 11:41:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:41:34] c-212-16.aglt2.org
[2025-07-27 11:41:34] apptainer works
[2025-07-27 11:41:34] Set ATHENA_PROC_NUMBER=8
[2025-07-27 11:41:34] Set ATHENA_CORE_NUMBER=8
[2025-07-27 11:41:34] Starting ATLAS job with PandaID=6747328451
[2025-07-27 11:41:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:23:16]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:23:16]  scope=mc23_13p6TeV
[2025-07-27 13:23:16]  status=None
[2025-07-27 13:23:16]  status_code=0
[2025-07-27 13:23:16]  storage_token=
[2025-07-27 13:23:16]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747328451/log.45743349._046815.job.log.tgz.1
[2025-07-27 13:23:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/3a/log.45743349._046815.job.log.tgz.1
[2025-07-27 13:23:16]  workdir=None
[2025-07-27 13:23:16] ]
[2025-07-27 13:23:16] 2025-07-27 17:22:29,078 | INFO     | transferring file log.45743349._046815.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747328451/log.45743349._046815.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 13:23:16] 2025-07-27 17:22:29,078 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747328451/log.45743349._046815.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._046815.job
[2025-07-27 13:23:16] 2025-07-27 17:22:29,120 | INFO     | adding to output.list: log.45743349._046815.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/3a/log.45743349._046815.job.log.tg
[2025-07-27 13:23:16] 2025-07-27 17:22:29,121 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 13:23:16] 2025-07-27 17:22:29,121 | INFO     | summary of transferred files:
[2025-07-27 13:23:16] 2025-07-27 17:22:29,121 | INFO     |  -- lfn=log.45743349._046815.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 13:23:16] 2025-07-27 17:22:29,122 | INFO     | stage-out finished correctly
[2025-07-27 13:23:16] 2025-07-27 17:22:30,423 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 13:23:16] 2025-07-27 17:22:30,670 | INFO     | job 6747328451 has state=finished
[2025-07-27 13:23:16] 2025-07-27 17:22:30,670 | INFO     | preparing for final server update for job 6747328451 in state='finished'
[2025-07-27 13:23:16] 2025-07-27 17:22:30,671 | INFO     | this job has now completed (state=finished)
[2025-07-27 13:23:16] 2025-07-27 17:22:30,671 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 13:23:16] 2025-07-27 17:22:30,671 | INFO     | log transfer has been attempted: DONE
[2025-07-27 13:23:16] 2025-07-27 17:22:30,671 | INFO     | job 6747328451 has finished - writing final server update
[2025-07-27 13:23:16] 2025-07-27 17:22:30,672 | INFO     | total number of processed events: 400 (read)
[2025-07-27 13:23:16] 2025-07-27 17:22:30,673 | INFO     | executing command: lscpu
[2025-07-27 13:23:16] 2025-07-27 17:22:30,777 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 13:23:16] 2025-07-27 17:22:31,518 | WARNING  | process 1255455 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 13:23:16] 2025-07-27 17:22:31,518 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747328451/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:23:16] 2025-07-27 17:22:32,005 | INFO     | number of running child processes to parent process 1255455: 1
[2025-07-27 13:23:16] 2025-07-27 17:22:32,005 | INFO     | maximum number of monitored processes: 6
[2025-07-27 13:23:16] 2025-07-27 17:22:34,508 | INFO     | monitor loop #416: job 0:6747328451 is in state 'finished'
[2025-07-27 13:23:16] 2025-07-27 17:22:34,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:23:16] 2025-07-27 17:22:37,015 | INFO     | monitor loop #417: job 0:6747328451 is in state 'finished'
[2025-07-27 13:23:16] 2025-07-27 17:22:37,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:23:16] 2025-07-27 17:22:39,521 | INFO     | monitor loop #418: job 0:6747328451 is in state 'finished'
[2025-07-27 13:23:16] 2025-07-27 17:22:39,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:23:16] 2025-07-27 17:22:42,026 | INFO     | monitor loop #419: job 0:6747328451 is in state 'finished'
[2025-07-27 13:23:16] 2025-07-27 17:22:42,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:23:16] 2025-07-27 17:22:42,672 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 13:23:16] 2025-07-27 17:22:42,721 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3104.7581562500004
[2025-07-27 13:23:16] 2025-07-27 17:22:42,738 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747328451/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:23:16] 2025-07-27 17:22:42,738 | INFO     | extracted standard info from prmon json
[2025-07-27 13:23:16] 2025-07-27 17:22:42,738 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:23:16] 2025-07-27 17:22:42,738 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:23:16] 2025-07-27 17:22:42,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:23:16] 2025-07-27 17:22:42,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:23:16] 2025-07-27 17:22:42,740 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:23:16] 2025-07-27 17:22:42,740 | INFO     | sum of square deviations: 233641590.0
[2025-07-27 13:23:16] 2025-07-27 17:22:42,741 | INFO     | sum of deviations: -20131933577.999996
[2025-07-27 13:23:16] 2025-07-27 17:22:42,741 | INFO     | mean x: 1753634016.0
[2025-07-27 13:23:16] 2025-07-27 17:22:42,741 | INFO     | mean y: 2656934.9340659343
[2025-07-27 13:23:16] 2025-07-27 17:22:42,741 | INFO     | -- intersect: 151106077906.48874
[2025-07-27 13:23:16] 2025-07-27 17:22:42,741 | INFO     | intersect: 151106077906.48874
[2025-07-27 13:23:16] 2025-07-27 17:22:42,741 | INFO     | chi2: 0.15948566977067796
[2025-07-27 13:23:16] 2025-07-27 17:22:42,741 | INFO     | -- intersect: 151106077906.48874
[2025-07-27 13:23:16] 2025-07-27 17:22:42,742 | INFO     | current memory leak: -86.17 B/s (using 91 data points, chi2=0.16)
[2025-07-27 13:23:16] 2025-07-27 17:22:42,742 | INFO     | could have reported an average CPU frequency of 3103 MHz (7 samples)
[2025-07-27 13:23:16] 2025-07-27 17:22:42,742 | INFO     | ..............................
[2025-07-27 13:23:16] 2025-07-27 17:22:42,742 | INFO     | . Timing measurements:
[2025-07-27 13:23:16] 2025-07-27 17:22:42,742 | INFO     | . get job = 0 s
[2025-07-27 13:23:16] 2025-07-27 17:22:42,742 | INFO     | . initial setup = 3 s
[2025-07-27 13:23:16] 2025-07-27 17:22:42,742 | INFO     | . payload setup = 15 s
[2025-07-27 13:23:16] 2025-07-27 17:22:42,742 | INFO     | . stage-in = 0 s
[2025-07-27 13:23:16] 2025-07-27 17:22:42,742 | INFO     | . payload execution = 5987 s
[2025-07-27 13:23:16] 2025-07-27 17:22:42,743 | INFO     | . stage-out = 1 s
[2025-07-27 13:23:16] 2025-07-27 17:22:42,744 | INFO     | . log creation = 0 s
[2025-07-27 13:23:16] 2025-07-27 17:22:42,744 | INFO     | ..............................
[2025-07-27 13:23:16] 2025-07-27 17:22:43,096 | INFO     | 
[2025-07-27 13:23:16] 2025-07-27 17:22:43,096 | INFO     | job summary report
[2025-07-27 13:23:16] 2025-07-27 17:22:43,096 | INFO     | --------------------------------------------------
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | PanDA job id: 6747328451
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | task id: 45743349
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | errors: (none)
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | pilot state: finished 
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | transexitcode: 0
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | exeerrorcode: 0
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | exeerrordiag: 
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | exitcode: 0
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | exitmsg: OK
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | cpuconsumptiontime: 37400 s
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | nevents: 400
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | neventsw: 0
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | pid: 1255455
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | pgrp: 1255455
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | corecount: 8
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | event service: False
[2025-07-27 13:23:16] 2025-07-27 17:22:43,097 | INFO     | sizes: {0: 2397198, 1: 2397453, 2: 2397481, 12: 2397771, 6006: 2424742, 6008: 2433740, 6009: 2433924, 6022: 2434118}
[2025-07-27 13:23:16] 2025-07-27 17:22:43,098 | INFO     | --------------------------------------------------
[2025-07-27 13:23:16] 2025-07-27 17:22:43,098 | INFO     | 
[2025-07-27 13:23:16] 2025-07-27 17:22:43,098 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 13:23:16] 2025-07-27 17:22:43,126 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,126 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,127 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,128 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:23:16] 2025-07-27 17:22:43,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,128 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:23:16] 2025-07-27 17:22:43,128 | INFO     | job 6747328451 has completed (purged errors)
[2025-07-27 13:23:16] 2025-07-27 17:22:43,128 | INFO     | overall cleanup function is called
[2025-07-27 13:23:16] 2025-07-27 17:22:44,139 | INFO     | --- collectZombieJob: --- 10, [1255455]
[2025-07-27 13:23:16] 2025-07-27 17:22:44,139 | INFO     | zombie collector waiting for pid 1255455
[2025-07-27 13:23:16] 2025-07-27 17:22:44,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:23:16] 2025-07-27 17:22:44,139 | INFO     | collected zombie processes
[2025-07-27 13:23:16] 2025-07-27 17:22:44,139 | INFO     | will attempt to kill all subprocesses of pid=1255455
[2025-07-27 13:23:16] 2025-07-27 17:22:44,683 | INFO     | process IDs to be killed: [1255455] (in reverse order)
[2025-07-27 13:23:16] 2025-07-27 17:22:44,889 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:23:16] 2025-07-27 17:22:44,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:23:16] 2025-07-27 17:22:44,938 | INFO     | did not find any defunct processes belonging to 1255455
[2025-07-27 13:23:16] 2025-07-27 17:22:44,958 | INFO     | did not find any defunct processes belonging to 1255455
[2025-07-27 13:23:16] 2025-07-27 17:22:44,958 | INFO     | ready for new job
[2025-07-27 13:23:16] 2025-07-27 17:22:44,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:23:16] 2025-07-27 17:22:44,960 | INFO     | ***************************************
[2025-07-27 13:23:16] 2025-07-27 17:22:44,960 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:23:16] 2025-07-27 17:22:44,960 | INFO     | ***************************************
[2025-07-27 13:23:16] 2025-07-27 17:22:44,960 | INFO     | 
[2025-07-27 13:23:16] 2025-07-27 17:22:44,966 | INFO     | architecture information:
[2025-07-27 13:23:16] 2025-07-27 17:22:44,967 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:23:16] 2025-07-27 17:22:45,009 | INFO     | cat /etc/os-release:
[2025-07-27 13:23:16] NAME="CentOS Linux"
[2025-07-27 13:23:16] VERSION="7 (Core)"
[2025-07-27 13:23:16] ID="centos"
[2025-07-27 13:23:16] ID_LIKE="rhel fedora"
[2025-07-27 13:23:16] VERSION_ID="7"
[2025-07-27 13:23:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:23:16] ANSI_COLOR="0;31"
[2025-07-27 13:23:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:23:16] HOME_URL="https://www.centos.org/"
[2025-07-27 13:23:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:23:16] 
[2025-07-27 13:23:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:23:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:23:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:23:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:23:16] 
[2025-07-27 13:23:16] 2025-07-27 17:22:45,010 | INFO     | ***************************************
[2025-07-27 13:23:16] 2025-07-27 17:22:45,513 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 13:23:16] 2025-07-27 17:22:45,599 | INFO     | sufficient remaining disk space (128976945152 B)
[2025-07-27 13:23:16] 2025-07-27 17:22:45,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:23:16] 2025-07-27 17:22:45,600 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:23:16] 2025-07-27 17:22:45,600 | INFO     | update_server=False
[2025-07-27 13:23:16] 2025-07-27 17:22:45,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:23:16] 2025-07-27 17:22:45,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:23:16] 2025-07-27 17:22:45,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:23:16] 2025-07-27 17:22:45,602 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:23:16] 2025-07-27 17:22:45,602 | INFO     | aborting loop
[2025-07-27 13:23:16] 2025-07-27 17:22:46,571 | INFO     | all job control threads have been joined
[2025-07-27 13:23:16] 2025-07-27 17:22:46,574 | INFO     | all data control threads have been joined
[2025-07-27 13:23:16] 2025-07-27 17:22:46,605 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:46,611 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:46,669 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:46,798 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:46,874 | INFO     | all payload control threads have been joined
[2025-07-27 13:23:16] 2025-07-27 17:22:46,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:47,047 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:47,548 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:47,578 | INFO     | [job] control thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:47,580 | INFO     | [data] control thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:47,607 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:47,629 | INFO     | [job] validate thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:47,744 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:47,807 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:47,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:23:16] 2025-07-27 17:22:47,880 | INFO     | [payload] control thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:48,838 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:49,609 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:23:16] 2025-07-27 17:22:50,902 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515314423616)>', '<ExcThread(monitor, started 140514686924544)>']
[2025-07-27 13:23:16] 2025-07-27 17:22:55,930 | INFO     | all workflow threads have been joined
[2025-07-27 13:23:16] 2025-07-27 17:22:55,936 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:23:16] 2025-07-27 17:22:55,937 | INFO     | traces error code: 0
[2025-07-27 13:23:16] 2025-07-27 17:22:55,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:23:16] 2025-07-27 17:23:15,980 | INFO     | PID=1245949 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:23:16] 2025-07-27 17:23:15,981 | INFO     | .. there are 25 such processes running
[2025-07-27 13:23:16] 2025-07-27 17:23:15,981 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:23:16] 2025-07-27 17:23:15,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:23:16] 2025-07-27 17:23:15,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:23:16] 2025-07-27 17:23:15,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:23:16] 2025-07-27 17:23:15,981 | INFO     | [monitor] control thread has ended
[2025-07-27 13:23:16] 2025-07-27 17:23:16,224 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:23:16] 2025-07-27 17:23:16,240 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:23:16] 2025-07-27 17:23:16,251 [wrapper] pilotpid: 1245949
[2025-07-27 13:23:16] 2025-07-27 17:23:16,258 [wrapper] Pilot exit status: 0
[2025-07-27 13:23:16] 2025-07-27 17:23:16,279 [wrapper] pandaids: 6747328451
[2025-07-27 13:23:16] 2025-07-27 17:23:16,395 [wrapper] cleanup supervisor_pilot 1801762 1245950
[2025-07-27 13:23:16] 2025-07-27 17:23:16,404 [wrapper] Test setup, not cleaning
[2025-07-27 13:23:16] 2025-07-27 17:23:16,411 [wrapper] apfmon messages muted
[2025-07-27 13:23:16] 2025-07-27 17:23:16,415 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:23:16] 2025-07-27 17:23:16,421 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:23:16]  *** Error codes and diagnostics ***
[2025-07-27 13:23:16]     "exeErrorCode": 0,
[2025-07-27 13:23:16]     "exeErrorDiag": "",
[2025-07-27 13:23:16]     "pilotErrorCode": 0,
[2025-07-27 13:23:16]     "pilotErrorDiag": "",
[2025-07-27 13:23:16]  *** Listing of results directory ***
[2025-07-27 13:23:16] total 349824
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 06:10 pilot3.tar.gz
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 06:22 queuedata.json
[2025-07-27 13:23:16] -rwx------. 1 boincer umatlas     36292 Jul 27 06:23 runpilot2-wrapper.sh
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas       100 Jul 27 11:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:23:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 11:41 run_atlas
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas       105 Jul 27 11:41 job.xml
[2025-07-27 13:23:16] -rw-r--r--. 2 boincer umatlas 145028350 Jul 27 11:41 EVNT.45743347._001856.pool.root.1
[2025-07-27 13:23:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 11:41 start_atlas.sh
[2025-07-27 13:23:16] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 11:41 shared
[2025-07-27 13:23:16] -rw-r--r--. 2 boincer umatlas    542899 Jul 27 11:41 input.tar.gz
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas         0 Jul 27 11:41 boinc_lockfile
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 11:41 pandaJob.out
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas    980101 Jul 27 11:41 agis_schedconf.cvmfs.json
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas   1593052 Jul 27 11:41 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:23:16] drwx------. 4 boincer umatlas      4096 Jul 27 11:41 pilot3
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 13:19 init_data.xml
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas 207546130 Jul 27 13:21 HITS.45743349._046815.pool.root.1
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas       530 Jul 27 13:21 boinc_task_state.xml
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas      1045 Jul 27 13:22 memory_monitor_summary.json
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas    315397 Jul 27 13:22 log.45743349._046815.job.log.tgz.1
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas        95 Jul 27 13:22 pilot_heartbeat.json
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas      7800 Jul 27 13:22 heartbeat.json
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas        27 Jul 27 13:23 wrapper_checkpoint.txt
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 13:23 boinc_mmap_file
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas       823 Jul 27 13:23 pilotlog.txt
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas    566792 Jul 27 13:23 log.45743349._046815.job.log.1
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas       357 Jul 27 13:23 output.list
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas       620 Jul 27 13:23 runtime_log
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas    901120 Jul 27 13:23 result.tar.gz
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 13:23 runtime_log.err
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas       655 Jul 27 13:23 HGZLDmMiD07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmE0ULDmkPTxtn.diag
[2025-07-27 13:23:16] -rw-r--r--. 1 boincer umatlas     22040 Jul 27 13:23 stderr.txt
[2025-07-27 13:23:16] HITS file was successfully produced:
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas 207546130 Jul 27 13:21 shared/HITS.pool.root.1
[2025-07-27 13:23:16]  *** Contents of shared directory: ***
[2025-07-27 13:23:16] total 345752
[2025-07-27 13:23:16] -rw-r--r--. 2 boincer umatlas 145028350 Jul 27 11:41 ATLAS.root_0
[2025-07-27 13:23:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 11:41 start_atlas.sh
[2025-07-27 13:23:16] -rw-r--r--. 2 boincer umatlas    542899 Jul 27 11:41 input.tar.gz
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas 207546130 Jul 27 13:21 HITS.pool.root.1
[2025-07-27 13:23:16] -rw-------. 1 boincer umatlas    901120 Jul 27 13:23 result.tar.gz
13:23:18 (1241646): run_atlas exited; CPU time 37562.304603
13:23:18 (1241646): called boinc_finish(0)

</stderr_txt>
]]>

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