Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:23:17 (1334248): wrapper (7.7.26015): starting
11:23:17 (1334248): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 11:23:17] Arguments: --nthreads 8
[2025-07-27 11:23:17] Threads: 8
[2025-07-27 11:23:17] Checking for CVMFS
[2025-07-27 11:23:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 11:23:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 11:23:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 11:23:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 11:23:17] 2.13.1.0 641173 14345 187272 148817 3 232 34318386 40960001 18395 16776704 0 49908736 99.808 50821265 40452 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 11:23:17] CVMFS is ok
[2025-07-27 11:23:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 11:23:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 11:23:17] Further information can be found at the LHC@home message board.
[2025-07-27 11:23:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:23:17] Checking for apptainer binary...
[2025-07-27 11:23:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 11:23:17] Running /usr/bin/apptainer --version
[2025-07-27 11:23:17] apptainer version 1.4.1-1.el9
[2025-07-27 11:23:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:23:18] c-212-8.aglt2.org
[2025-07-27 11:23:18] apptainer works
[2025-07-27 11:23:18] Set ATHENA_PROC_NUMBER=8
[2025-07-27 11:23:18] Set ATHENA_CORE_NUMBER=8
[2025-07-27 11:23:18] Starting ATLAS job with PandaID=6746386367
[2025-07-27 11:23:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 14:04:08]  *** The last 200 lines of the pilot log: ***
[2025-07-27 14:04:08] 2025-07-27 18:03:36,126 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 14:04:08] 2025-07-27 18:03:36,134 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2997.2149479166656
[2025-07-27 14:04:08] 2025-07-27 18:03:36,151 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6746386367/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 14:04:08] 2025-07-27 18:03:36,151 | INFO     | extracted standard info from prmon json
[2025-07-27 14:04:08] 2025-07-27 18:03:36,152 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 14:04:08] 2025-07-27 18:03:36,152 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 14:04:08] 2025-07-27 18:03:36,152 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 14:04:08] 2025-07-27 18:03:36,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 14:04:08] 2025-07-27 18:03:36,155 | INFO     | fitting pss+swap vs Time
[2025-07-27 14:04:08] 2025-07-27 18:03:36,156 | INFO     | sum of square deviations: 1199940638.0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,156 | INFO     | sum of deviations: 7439358151.000009
[2025-07-27 14:04:08] 2025-07-27 18:03:36,157 | INFO     | mean x: 1753634612.0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,157 | INFO     | mean y: 2532616.0127388537
[2025-07-27 14:04:08] 2025-07-27 18:03:36,157 | INFO     | -- intersect: -10869601830.906406
[2025-07-27 14:04:08] 2025-07-27 18:03:36,157 | INFO     | intersect: -10869601830.906406
[2025-07-27 14:04:08] 2025-07-27 18:03:36,157 | INFO     | chi2: 1.4218069314521944
[2025-07-27 14:04:08] 2025-07-27 18:03:36,157 | INFO     | sum of square deviations: 1088905998.0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,158 | INFO     | sum of deviations: 7520083995.499999
[2025-07-27 14:04:08] 2025-07-27 18:03:36,158 | INFO     | mean x: 1753634459.5
[2025-07-27 14:04:08] 2025-07-27 18:03:36,158 | INFO     | mean y: 2532726.9671052634
[2025-07-27 14:04:08] 2025-07-27 18:03:36,158 | INFO     | -- intersect: -12108226564.52799
[2025-07-27 14:04:08] 2025-07-27 18:03:36,159 | INFO     | intersect: -12108226564.52799
[2025-07-27 14:04:08] 2025-07-27 18:03:36,159 | INFO     | chi2: 1.423175465708726
[2025-07-27 14:04:08] 2025-07-27 18:03:36,159 | INFO     | current chi2=1.423175465708726 (change=-0.09625317096562007 %)
[2025-07-27 14:04:08] 2025-07-27 18:03:36,159 | INFO     | right removable region: 151
[2025-07-27 14:04:08] 2025-07-27 18:03:36,159 | INFO     | sum of square deviations: 1088905998.0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,160 | INFO     | sum of deviations: -15916813021.000002
[2025-07-27 14:04:08] 2025-07-27 18:03:36,160 | INFO     | mean x: 1753634764.5
[2025-07-27 14:04:08] 2025-07-27 18:03:36,160 | INFO     | mean y: 2564237.8947368423
[2025-07-27 14:04:08] 2025-07-27 18:03:36,160 | INFO     | -- intersect: 25635884933.104897
[2025-07-27 14:04:08] 2025-07-27 18:03:36,160 | INFO     | intersect: 25635884933.104897
[2025-07-27 14:04:08] 2025-07-27 18:03:36,161 | INFO     | chi2: 0.031067781959008483
[2025-07-27 14:04:08] 2025-07-27 18:03:36,161 | INFO     | current chi2=0.031067781959008483 (change=97.81490853140824 %)
[2025-07-27 14:04:08] 2025-07-27 18:03:36,161 | INFO     | sum of square deviations: 984941258.0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,162 | INFO     | sum of deviations: -15485037148.0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,162 | INFO     | mean x: 1753634917.0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,162 | INFO     | mean y: 2563593.088435374
[2025-07-27 14:04:08] 2025-07-27 18:03:36,162 | INFO     | -- intersect: 27572839092.477554
[2025-07-27 14:04:08] 2025-07-27 18:03:36,162 | INFO     | intersect: 27572839092.477554
[2025-07-27 14:04:08] 2025-07-27 18:03:36,162 | INFO     | chi2: 0.028995593303255608
[2025-07-27 14:04:08] 2025-07-27 18:03:36,162 | INFO     | current chi2=0.028995593303255608 (change=6.669895708959739 %)
[2025-07-27 14:04:08] 2025-07-27 18:03:36,162 | INFO     | left removable region: 20
[2025-07-27 14:04:08] 2025-07-27 18:03:36,163 | INFO     | sum of square deviations: 697054930.0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,163 | INFO     | sum of deviations: -11645854101.0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,163 | INFO     | mean x: 1753635039.0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,163 | INFO     | mean y: 2559866.3053435115
[2025-07-27 14:04:08] 2025-07-27 18:03:36,164 | INFO     | -- intersect: 29300936409.737072
[2025-07-27 14:04:08] 2025-07-27 18:03:36,164 | INFO     | intersect: 29300936409.737072
[2025-07-27 14:04:08] 2025-07-27 18:03:36,164 | INFO     | chi2: 0.027722930663068347
[2025-07-27 14:04:08] 2025-07-27 18:03:36,164 | INFO     | -- intersect: 29300936409.737072
[2025-07-27 14:04:08] 2025-07-27 18:03:36,164 | INFO     | current memory leak: -16.71 B/s (using 131 data points, chi2=0.03)
[2025-07-27 14:04:08] 2025-07-27 18:03:36,165 | INFO     | could have reported an average CPU frequency of 2947 MHz (9 samples)
[2025-07-27 14:04:08] 2025-07-27 18:03:36,165 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-07-27 14:04:08] 2025-07-27 18:03:36,165 | INFO     | ..............................
[2025-07-27 14:04:08] 2025-07-27 18:03:36,165 | INFO     | . Timing measurements:
[2025-07-27 14:04:08] 2025-07-27 18:03:36,165 | INFO     | . get job = 0 s
[2025-07-27 14:04:08] 2025-07-27 18:03:36,165 | INFO     | . initial setup = 2 s
[2025-07-27 14:04:08] 2025-07-27 18:03:36,165 | INFO     | . payload setup = 10 s
[2025-07-27 14:04:08] 2025-07-27 18:03:36,165 | INFO     | . stage-in = 1 s
[2025-07-27 14:04:08] 2025-07-27 18:03:36,165 | INFO     | . payload execution = 9557 s
[2025-07-27 14:04:08] 2025-07-27 18:03:36,165 | INFO     | . stage-out = 0 s
[2025-07-27 14:04:08] 2025-07-27 18:03:36,166 | INFO     | . log creation = 0 s
[2025-07-27 14:04:08] 2025-07-27 18:03:36,166 | INFO     | ..............................
[2025-07-27 14:04:08] 2025-07-27 18:03:36,258 | INFO     | 
[2025-07-27 14:04:08] 2025-07-27 18:03:36,259 | INFO     | job summary report
[2025-07-27 14:04:08] 2025-07-27 18:03:36,259 | INFO     | --------------------------------------------------
[2025-07-27 14:04:08] 2025-07-27 18:03:36,259 | INFO     | PanDA job id: 6746386367
[2025-07-27 14:04:08] 2025-07-27 18:03:36,259 | INFO     | task id: 45758375
[2025-07-27 14:04:08] 2025-07-27 18:03:36,259 | INFO     | errors: (none)
[2025-07-27 14:04:08] 2025-07-27 18:03:36,261 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 14:04:08] 2025-07-27 18:03:36,263 | INFO     | pilot state: finished 
[2025-07-27 14:04:08] 2025-07-27 18:03:36,263 | INFO     | transexitcode: 0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,263 | INFO     | exeerrorcode: 0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,263 | INFO     | exeerrordiag: 
[2025-07-27 14:04:08] 2025-07-27 18:03:36,264 | INFO     | exitcode: 0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,264 | INFO     | exitmsg: OK
[2025-07-27 14:04:08] 2025-07-27 18:03:36,264 | INFO     | cpuconsumptiontime: 47709 s
[2025-07-27 14:04:08] 2025-07-27 18:03:36,264 | INFO     | nevents: 400
[2025-07-27 14:04:08] 2025-07-27 18:03:36,264 | INFO     | neventsw: 0
[2025-07-27 14:04:08] 2025-07-27 18:03:36,264 | INFO     | pid: 1346094
[2025-07-27 14:04:08] 2025-07-27 18:03:36,267 | INFO     | pgrp: 1346094
[2025-07-27 14:04:08] 2025-07-27 18:03:36,267 | INFO     | corecount: 8
[2025-07-27 14:04:08] 2025-07-27 18:03:36,267 | INFO     | event service: False
[2025-07-27 14:04:08] 2025-07-27 18:03:36,267 | INFO     | sizes: {0: 2397286, 1: 2397485, 9: 2397747, 12: 2397775, 9573: 2426257, 9575: 2435439, 9582: 2435641}
[2025-07-27 14:04:08] 2025-07-27 18:03:36,267 | INFO     | --------------------------------------------------
[2025-07-27 14:04:08] 2025-07-27 18:03:36,267 | INFO     | 
[2025-07-27 14:04:08] 2025-07-27 18:03:36,268 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 14:04:08] 2025-07-27 18:03:36,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 14:04:08] 2025-07-27 18:03:36,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 14:04:08] 2025-07-27 18:03:36,305 | INFO     | job 6746386367 has completed (purged errors)
[2025-07-27 14:04:08] 2025-07-27 18:03:36,305 | INFO     | overall cleanup function is called
[2025-07-27 14:04:08] 2025-07-27 18:03:37,313 | INFO     | --- collectZombieJob: --- 10, [1346094]
[2025-07-27 14:04:08] 2025-07-27 18:03:37,314 | INFO     | zombie collector waiting for pid 1346094
[2025-07-27 14:04:08] 2025-07-27 18:03:37,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 14:04:08] 2025-07-27 18:03:37,315 | INFO     | collected zombie processes
[2025-07-27 14:04:08] 2025-07-27 18:03:37,315 | INFO     | will attempt to kill all subprocesses of pid=1346094
[2025-07-27 14:04:08] 2025-07-27 18:03:37,777 | INFO     | process IDs to be killed: [1346094] (in reverse order)
[2025-07-27 14:04:08] 2025-07-27 18:03:37,920 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 14:04:08] 2025-07-27 18:03:37,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 14:04:08] 2025-07-27 18:03:37,941 | INFO     | did not find any defunct processes belonging to 1346094
[2025-07-27 14:04:08] 2025-07-27 18:03:37,958 | INFO     | did not find any defunct processes belonging to 1346094
[2025-07-27 14:04:08] 2025-07-27 18:03:37,958 | INFO     | ready for new job
[2025-07-27 14:04:08] 2025-07-27 18:03:37,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 14:04:08] 2025-07-27 18:03:37,966 | INFO     | ***************************************
[2025-07-27 14:04:08] 2025-07-27 18:03:37,966 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 14:04:08] 2025-07-27 18:03:37,966 | INFO     | ***************************************
[2025-07-27 14:04:08] 2025-07-27 18:03:37,967 | INFO     | 
[2025-07-27 14:04:08] 2025-07-27 18:03:37,972 | INFO     | architecture information:
[2025-07-27 14:04:08] 2025-07-27 18:03:37,972 | INFO     | executing command: cat /etc/os-release
[2025-07-27 14:04:08] 2025-07-27 18:03:37,986 | INFO     | cat /etc/os-release:
[2025-07-27 14:04:08] NAME="CentOS Linux"
[2025-07-27 14:04:08] VERSION="7 (Core)"
[2025-07-27 14:04:08] ID="centos"
[2025-07-27 14:04:08] ID_LIKE="rhel fedora"
[2025-07-27 14:04:08] VERSION_ID="7"
[2025-07-27 14:04:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 14:04:08] ANSI_COLOR="0;31"
[2025-07-27 14:04:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 14:04:08] HOME_URL="https://www.centos.org/"
[2025-07-27 14:04:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 14:04:08] 
[2025-07-27 14:04:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 14:04:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 14:04:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 14:04:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 14:04:08] 
[2025-07-27 14:04:08] 2025-07-27 18:03:37,986 | INFO     | ***************************************
[2025-07-27 14:04:08] 2025-07-27 18:03:38,489 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 14:04:08] 2025-07-27 18:03:38,511 | INFO     | sufficient remaining disk space (128974848000 B)
[2025-07-27 14:04:08] 2025-07-27 18:03:38,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 14:04:08] 2025-07-27 18:03:38,512 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 14:04:08] 2025-07-27 18:03:38,512 | INFO     | update_server=False
[2025-07-27 14:04:08] 2025-07-27 18:03:38,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 14:04:08] 2025-07-27 18:03:38,516 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 14:04:08] 2025-07-27 18:03:38,517 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 14:04:08] 2025-07-27 18:03:38,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:04:08] 2025-07-27 18:03:38,517 | INFO     | will abort loop
[2025-07-27 14:04:08] 2025-07-27 18:03:38,756 | INFO     | all payload control threads have been joined
[2025-07-27 14:04:08] 2025-07-27 18:03:39,265 | INFO     | all data control threads have been joined
[2025-07-27 14:04:08] 2025-07-27 18:03:39,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 14:04:08] 2025-07-27 18:03:39,517 | INFO     | [job] retrieve thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:39,522 | INFO     | [job] job monitor thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:39,557 | INFO     | all job control threads have been joined
[2025-07-27 14:04:08] 2025-07-27 18:03:39,617 | INFO     | [job] validate thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:39,762 | INFO     | [payload] control thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:39,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 14:04:08] 2025-07-27 18:03:39,822 | INFO     | [data] copytool_in thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:40,056 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:40,197 | INFO     | [payload] failed_post thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:40,271 | INFO     | [data] control thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:40,273 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:40,564 | INFO     | [job] control thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:40,904 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:40,943 | INFO     | [payload] validate_post thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:41,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:04:08] 2025-07-27 18:03:41,347 | INFO     | [data] copytool_out thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:42,274 | INFO     | [job] queue monitor thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:43,812 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:49,387 | INFO     | job.realtimelogging is not enabled
[2025-07-27 14:04:08] 2025-07-27 18:03:50,395 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 14:04:08] 2025-07-27 18:03:52,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138390738752)>', '<ExcThread(monitor, started 140137535108864)>']
[2025-07-27 14:04:08] 2025-07-27 18:03:57,248 | INFO     | all workflow threads have been joined
[2025-07-27 14:04:08] 2025-07-27 18:03:57,249 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 14:04:08] 2025-07-27 18:03:57,249 | INFO     | traces error code: 0
[2025-07-27 14:04:08] 2025-07-27 18:03:57,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 14:04:08] 2025-07-27 18:04:08,069 | INFO     | PID=1337894 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 14:04:08] 2025-07-27 18:04:08,069 | INFO     | .. there are 21 such processes running
[2025-07-27 14:04:08] 2025-07-27 18:04:08,070 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 14:04:08] 2025-07-27 18:04:08,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 14:04:08] 2025-07-27 18:04:08,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 14:04:08] 2025-07-27 18:04:08,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 14:04:08] 2025-07-27 18:04:08,070 | INFO     | [monitor] control thread has ended
[2025-07-27 14:04:08] 2025-07-27 18:04:08,232 [wrapper] ==== pilot stdout END ====
[2025-07-27 14:04:08] 2025-07-27 18:04:08,236 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 14:04:08] 2025-07-27 18:04:08,241 [wrapper] pilotpid: 1337894
[2025-07-27 14:04:08] 2025-07-27 18:04:08,243 [wrapper] Pilot exit status: 0
[2025-07-27 14:04:08] 2025-07-27 18:04:08,255 [wrapper] pandaids: 6746386367
[2025-07-27 14:04:08] 2025-07-27 18:04:08,350 [wrapper] cleanup supervisor_pilot 1951746 1337895
[2025-07-27 14:04:08] 2025-07-27 18:04:08,356 [wrapper] Test setup, not cleaning
[2025-07-27 14:04:08] 2025-07-27 18:04:08,360 [wrapper] apfmon messages muted
[2025-07-27 14:04:08] 2025-07-27 18:04:08,363 [wrapper] ==== wrapper stdout END ====
[2025-07-27 14:04:08] 2025-07-27 18:04:08,366 [wrapper] ==== wrapper stderr END ====
[2025-07-27 14:04:08]  *** Error codes and diagnostics ***
[2025-07-27 14:04:08]     "exeErrorCode": 0,
[2025-07-27 14:04:08]     "exeErrorDiag": "",
[2025-07-27 14:04:08]     "pilotErrorCode": 0,
[2025-07-27 14:04:08]     "pilotErrorDiag": "",
[2025-07-27 14:04:08]  *** Listing of results directory ***
[2025-07-27 14:04:08] total 409576
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 03:18 queuedata.json
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 03:18 pilot3.tar.gz
[2025-07-27 14:04:08] -rwx------. 1 boincer umatlas     36292 Jul 27 03:20 runpilot2-wrapper.sh
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas       100 Jul 27 11:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 14:04:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 11:23 run_atlas
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas       105 Jul 27 11:23 job.xml
[2025-07-27 14:04:08] -rw-r--r--. 2 boincer umatlas 239068885 Jul 27 11:23 EVNT.45758373._000001.pool.root.1
[2025-07-27 14:04:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 11:23 start_atlas.sh
[2025-07-27 14:04:08] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 11:23 shared
[2025-07-27 14:04:08] -rw-r--r--. 2 boincer umatlas    542881 Jul 27 11:23 input.tar.gz
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas         0 Jul 27 11:23 boinc_lockfile
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas      2553 Jul 27 11:23 pandaJob.out
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas    980101 Jul 27 11:23 agis_schedconf.cvmfs.json
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas   1593052 Jul 27 11:23 agis_ddmendpoints.agis.ALL.json
[2025-07-27 14:04:08] drwx------. 4 boincer umatlas      4096 Jul 27 11:23 pilot3
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas 173994269 Jul 27 14:02 HITS.45758375._000005.pool.root.1
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas       529 Jul 27 14:03 boinc_task_state.xml
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas      1035 Jul 27 14:03 memory_monitor_summary.json
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas    345023 Jul 27 14:03 log.45758375._000005.job.log.tgz.1
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas      6943 Jul 27 14:03 init_data.xml
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas        95 Jul 27 14:03 pilot_heartbeat.json
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas      7761 Jul 27 14:03 heartbeat.json
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas        27 Jul 27 14:04 wrapper_checkpoint.txt
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 14:04 boinc_mmap_file
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas       823 Jul 27 14:04 pilotlog.txt
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas    885725 Jul 27 14:04 log.45758375._000005.job.log.1
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas       357 Jul 27 14:04 output.list
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas       620 Jul 27 14:04 runtime_log
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas   1249280 Jul 27 14:04 result.tar.gz
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 14:04 runtime_log.err
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas       654 Jul 27 14:04 1WMNDm7qA07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtdULDmSBM6xm.diag
[2025-07-27 14:04:08] -rw-r--r--. 1 boincer umatlas     21124 Jul 27 14:04 stderr.txt
[2025-07-27 14:04:08] HITS file was successfully produced:
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas 173994269 Jul 27 14:02 shared/HITS.pool.root.1
[2025-07-27 14:04:08]  *** Contents of shared directory: ***
[2025-07-27 14:04:08] total 405164
[2025-07-27 14:04:08] -rw-r--r--. 2 boincer umatlas 239068885 Jul 27 11:23 ATLAS.root_0
[2025-07-27 14:04:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 11:23 start_atlas.sh
[2025-07-27 14:04:08] -rw-r--r--. 2 boincer umatlas    542881 Jul 27 11:23 input.tar.gz
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas 173994269 Jul 27 14:02 HITS.pool.root.1
[2025-07-27 14:04:08] -rw-------. 1 boincer umatlas   1249280 Jul 27 14:04 result.tar.gz
14:04:10 (1334248): run_atlas exited; CPU time 48010.552326
14:04:10 (1334248): called boinc_finish(0)

</stderr_txt>
]]>

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