Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:19:13 (18323): wrapper (7.7.26015): starting
11:19:13 (18323): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 11:19:13] Arguments: --nthreads 12
[2025-07-27 11:19:13] Threads: 12
[2025-07-27 11:19:13] Checking for CVMFS
[2025-07-27 11:19:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 11:19:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 11:19:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 11:19:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 11:19:13] 2.11.2.0 2998 112126 100736 148817 1 56 14691935 20275201 1 130560 0 38533329 99.971 9724961 11010 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 11:19:13] CVMFS is ok
[2025-07-27 11:19:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 11:19:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 11:19:13] Further information can be found at the LHC@home message board.
[2025-07-27 11:19:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:19:13] Checking for apptainer binary...
[2025-07-27 11:19:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 11:19:13] Running /usr/bin/apptainer --version
[2025-07-27 11:19:13] apptainer version 1.3.2-1.el7
[2025-07-27 11:19:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:19:14] c-205-25.aglt2.org
[2025-07-27 11:19:14] apptainer works
[2025-07-27 11:19:14] Set ATHENA_PROC_NUMBER=12
[2025-07-27 11:19:14] Set ATHENA_CORE_NUMBER=12
[2025-07-27 11:19:14] Starting ATLAS job with PandaID=6747411475
[2025-07-27 11:19:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:43:01]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:43:01]  guid=1fba5f9b-36ff-4200-9b78-eab446879056
[2025-07-27 12:43:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 12:43:01]  is_altstaged=None
[2025-07-27 12:43:01]  is_tar=False
[2025-07-27 12:43:01]  lfn=log.45743349._048689.job.log.tgz.1
[2025-07-27 12:43:01]  mtime=0
[2025-07-27 12:43:01]  protocol_id=None
[2025-07-27 12:43:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 12:43:01]  replicas=None
[2025-07-27 12:43:01]  scope=mc23_13p6TeV
[2025-07-27 12:43:01]  status=None
[2025-07-27 12:43:01]  status_code=0
[2025-07-27 12:43:01]  storage_token=
[2025-07-27 12:43:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747411475/log.45743349._048689.job.log.tgz.1
[2025-07-27 12:43:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/83/log.45743349._048689.job.log.tgz.1
[2025-07-27 12:43:01]  workdir=None
[2025-07-27 12:43:01] ]
[2025-07-27 12:43:01] 2025-07-27 16:42:21,035 | INFO     | transferring file log.45743349._048689.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747411475/log.45743349._048689.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 12:43:01] 2025-07-27 16:42:21,036 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747411475/log.45743349._048689.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._048689.job
[2025-07-27 12:43:01] 2025-07-27 16:42:21,057 | INFO     | adding to output.list: log.45743349._048689.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/83/log.45743349._048689.job.log.tg
[2025-07-27 12:43:01] 2025-07-27 16:42:21,058 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 12:43:01] 2025-07-27 16:42:21,059 | INFO     | summary of transferred files:
[2025-07-27 12:43:01] 2025-07-27 16:42:21,059 | INFO     |  -- lfn=log.45743349._048689.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 12:43:01] 2025-07-27 16:42:21,059 | INFO     | stage-out finished correctly
[2025-07-27 12:43:01] 2025-07-27 16:42:21,146 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 12:43:01] 2025-07-27 16:42:24,160 | INFO     | job 6747411475 has state=finished
[2025-07-27 12:43:01] 2025-07-27 16:42:24,160 | INFO     | preparing for final server update for job 6747411475 in state='finished'
[2025-07-27 12:43:01] 2025-07-27 16:42:24,161 | INFO     | this job has now completed (state=finished)
[2025-07-27 12:43:01] 2025-07-27 16:42:24,161 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 12:43:01] 2025-07-27 16:42:24,161 | INFO     | log transfer has been attempted: DONE
[2025-07-27 12:43:01] 2025-07-27 16:42:24,161 | INFO     | job 6747411475 has finished - writing final server update
[2025-07-27 12:43:01] 2025-07-27 16:42:24,162 | INFO     | total number of processed events: 400 (read)
[2025-07-27 12:43:01] 2025-07-27 16:42:24,162 | INFO     | executing command: lscpu
[2025-07-27 12:43:01] 2025-07-27 16:42:24,187 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 12:43:01] 2025-07-27 16:42:26,167 | WARNING  | process 28327 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 12:43:01] 2025-07-27 16:42:26,167 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747411475/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:43:01] 2025-07-27 16:42:26,255 | INFO     | number of running child processes to parent process 28327: 1
[2025-07-27 12:43:01] 2025-07-27 16:42:26,255 | INFO     | maximum number of monitored processes: 6
[2025-07-27 12:43:01] 2025-07-27 16:42:28,707 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 12:43:01] 2025-07-27 16:42:28,711 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-27 12:43:01] 2025-07-27 16:42:28,713 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747411475/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:43:01] 2025-07-27 16:42:28,714 | INFO     | extracted standard info from prmon json
[2025-07-27 12:43:01] 2025-07-27 16:42:28,714 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:43:01] 2025-07-27 16:42:28,714 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:43:01] 2025-07-27 16:42:28,715 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:43:01] 2025-07-27 16:42:28,715 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:43:01] 2025-07-27 16:42:28,717 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:43:01] 2025-07-27 16:42:28,717 | INFO     | sum of square deviations: 125630262.5
[2025-07-27 12:43:01] 2025-07-27 16:42:28,717 | INFO     | sum of deviations: -8605499116.0
[2025-07-27 12:43:01] 2025-07-27 16:42:28,717 | INFO     | mean x: 1753632130.5
[2025-07-27 12:43:01] 2025-07-27 16:42:28,717 | INFO     | mean y: 2879825.108108108
[2025-07-27 12:43:01] 2025-07-27 16:42:28,718 | INFO     | -- intersect: 120124253835.66507
[2025-07-27 12:43:01] 2025-07-27 16:42:28,718 | INFO     | intersect: 120124253835.66507
[2025-07-27 12:43:01] 2025-07-27 16:42:28,718 | INFO     | chi2: 0.0736378179472592
[2025-07-27 12:43:01] 2025-07-27 16:42:28,718 | INFO     | -- intersect: 120124253835.66507
[2025-07-27 12:43:01] 2025-07-27 16:42:28,718 | INFO     | current memory leak: -68.50 B/s (using 74 data points, chi2=0.07)
[2025-07-27 12:43:01] 2025-07-27 16:42:28,719 | INFO     | could have reported an average CPU frequency of 2052 MHz (6 samples)
[2025-07-27 12:43:01] 2025-07-27 16:42:28,719 | INFO     | ..............................
[2025-07-27 12:43:01] 2025-07-27 16:42:28,719 | INFO     | . Timing measurements:
[2025-07-27 12:43:01] 2025-07-27 16:42:28,719 | INFO     | . get job = 0 s
[2025-07-27 12:43:01] 2025-07-27 16:42:28,719 | INFO     | . initial setup = 2 s
[2025-07-27 12:43:01] 2025-07-27 16:42:28,719 | INFO     | . payload setup = 9 s
[2025-07-27 12:43:01] 2025-07-27 16:42:28,719 | INFO     | . stage-in = 0 s
[2025-07-27 12:43:01] 2025-07-27 16:42:28,719 | INFO     | . payload execution = 4942 s
[2025-07-27 12:43:01] 2025-07-27 16:42:28,720 | INFO     | . stage-out = 0 s
[2025-07-27 12:43:01] 2025-07-27 16:42:28,720 | INFO     | . log creation = 0 s
[2025-07-27 12:43:01] 2025-07-27 16:42:28,720 | INFO     | ..............................
[2025-07-27 12:43:01] 2025-07-27 16:42:28,804 | INFO     | 
[2025-07-27 12:43:01] 2025-07-27 16:42:28,804 | INFO     | job summary report
[2025-07-27 12:43:01] 2025-07-27 16:42:28,804 | INFO     | --------------------------------------------------
[2025-07-27 12:43:01] 2025-07-27 16:42:28,804 | INFO     | PanDA job id: 6747411475
[2025-07-27 12:43:01] 2025-07-27 16:42:28,804 | INFO     | task id: 45743349
[2025-07-27 12:43:01] 2025-07-27 16:42:28,805 | INFO     | errors: (none)
[2025-07-27 12:43:01] 2025-07-27 16:42:28,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:43:01] 2025-07-27 16:42:28,805 | INFO     | pilot state: finished 
[2025-07-27 12:43:01] 2025-07-27 16:42:28,805 | INFO     | transexitcode: 0
[2025-07-27 12:43:01] 2025-07-27 16:42:28,805 | INFO     | exeerrorcode: 0
[2025-07-27 12:43:01] 2025-07-27 16:42:28,805 | INFO     | exeerrordiag: 
[2025-07-27 12:43:01] 2025-07-27 16:42:28,805 | INFO     | exitcode: 0
[2025-07-27 12:43:01] 2025-07-27 16:42:28,806 | INFO     | exitmsg: OK
[2025-07-27 12:43:01] 2025-07-27 16:42:28,806 | INFO     | cpuconsumptiontime: 54406 s
[2025-07-27 12:43:01] 2025-07-27 16:42:28,806 | INFO     | nevents: 400
[2025-07-27 12:43:01] 2025-07-27 16:42:28,806 | INFO     | neventsw: 0
[2025-07-27 12:43:01] 2025-07-27 16:42:28,806 | INFO     | pid: 28327
[2025-07-27 12:43:01] 2025-07-27 16:42:28,806 | INFO     | pgrp: 28327
[2025-07-27 12:43:01] 2025-07-27 16:42:28,807 | INFO     | corecount: 12
[2025-07-27 12:43:01] 2025-07-27 16:42:28,807 | INFO     | event service: False
[2025-07-27 12:43:01] 2025-07-27 16:42:28,807 | INFO     | sizes: {0: 2396647, 1: 2397503, 6: 2397765, 12: 2397793, 4955: 2424044, 4956: 2424043, 4957: 2433281, 4965: 2433419}
[2025-07-27 12:43:01] 2025-07-27 16:42:28,807 | INFO     | --------------------------------------------------
[2025-07-27 12:43:01] 2025-07-27 16:42:28,807 | INFO     | 
[2025-07-27 12:43:01] 2025-07-27 16:42:28,807 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 12:43:01] 2025-07-27 16:42:28,831 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,831 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,831 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,832 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,832 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,833 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,833 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,833 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,833 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,833 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,833 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,834 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:43:01] 2025-07-27 16:42:28,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,834 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:43:01] 2025-07-27 16:42:28,835 | INFO     | job 6747411475 has completed (purged errors)
[2025-07-27 12:43:01] 2025-07-27 16:42:28,835 | INFO     | overall cleanup function is called
[2025-07-27 12:43:01] 2025-07-27 16:42:29,843 | INFO     | --- collectZombieJob: --- 10, [28327]
[2025-07-27 12:43:01] 2025-07-27 16:42:29,843 | INFO     | zombie collector waiting for pid 28327
[2025-07-27 12:43:01] 2025-07-27 16:42:29,843 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:43:01] 2025-07-27 16:42:29,843 | INFO     | collected zombie processes
[2025-07-27 12:43:01] 2025-07-27 16:42:29,843 | INFO     | will attempt to kill all subprocesses of pid=28327
[2025-07-27 12:43:01] 2025-07-27 16:42:29,931 | INFO     | process IDs to be killed: [28327] (in reverse order)
[2025-07-27 12:43:01] 2025-07-27 16:42:29,983 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:43:01] 2025-07-27 16:42:29,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:43:01] 2025-07-27 16:42:29,986 | INFO     | did not find any defunct processes belonging to 28327
[2025-07-27 12:43:01] 2025-07-27 16:42:29,988 | INFO     | did not find any defunct processes belonging to 28327
[2025-07-27 12:43:01] 2025-07-27 16:42:29,989 | INFO     | ready for new job
[2025-07-27 12:43:01] 2025-07-27 16:42:29,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:43:01] 2025-07-27 16:42:29,990 | INFO     | ***************************************
[2025-07-27 12:43:01] 2025-07-27 16:42:29,990 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:43:01] 2025-07-27 16:42:29,990 | INFO     | ***************************************
[2025-07-27 12:43:01] 2025-07-27 16:42:29,990 | INFO     | 
[2025-07-27 12:43:01] 2025-07-27 16:42:29,991 | INFO     | architecture information:
[2025-07-27 12:43:01] 2025-07-27 16:42:29,991 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:43:01] 2025-07-27 16:42:30,006 | INFO     | cat /etc/os-release:
[2025-07-27 12:43:01] NAME="CentOS Linux"
[2025-07-27 12:43:01] VERSION="7 (Core)"
[2025-07-27 12:43:01] ID="centos"
[2025-07-27 12:43:01] ID_LIKE="rhel fedora"
[2025-07-27 12:43:01] VERSION_ID="7"
[2025-07-27 12:43:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:43:01] ANSI_COLOR="0;31"
[2025-07-27 12:43:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:43:01] HOME_URL="https://www.centos.org/"
[2025-07-27 12:43:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:43:01] 
[2025-07-27 12:43:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:43:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:43:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:43:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:43:01] 
[2025-07-27 12:43:01] 2025-07-27 16:42:30,007 | INFO     | ***************************************
[2025-07-27 12:43:01] 2025-07-27 16:42:30,510 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 12:43:01] 2025-07-27 16:42:30,527 | INFO     | sufficient remaining disk space (29350690816 B)
[2025-07-27 12:43:01] 2025-07-27 16:42:30,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:43:01] 2025-07-27 16:42:30,528 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:43:01] 2025-07-27 16:42:30,528 | INFO     | update_server=False
[2025-07-27 12:43:01] 2025-07-27 16:42:30,528 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:43:01] 2025-07-27 16:42:30,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:43:01] 2025-07-27 16:42:30,529 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:43:01] 2025-07-27 16:42:30,529 | INFO     | aborting loop
[2025-07-27 12:43:01] 2025-07-27 16:42:30,843 | INFO     | all payload control threads have been joined
[2025-07-27 12:43:01] 2025-07-27 16:42:30,915 | INFO     | all job control threads have been joined
[2025-07-27 12:43:01] 2025-07-27 16:42:30,982 | INFO     | all data control threads have been joined
[2025-07-27 12:43:01] 2025-07-27 16:42:31,534 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:31,534 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:31,535 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:31,661 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:43:01] 2025-07-27 16:42:31,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:43:01] 2025-07-27 16:42:31,831 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:31,848 | INFO     | [payload] control thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:31,895 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:31,921 | INFO     | [job] control thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:31,987 | INFO     | [data] control thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:31,990 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:32,056 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:32,316 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:32,325 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:32,950 | INFO     | [job] validate thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:33,009 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:33,666 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:35,744 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:43:01] 2025-07-27 16:42:36,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084458731328)>', '<ExcThread(monitor, started 140084015773440)>']
[2025-07-27 12:43:01] 2025-07-27 16:42:41,807 | INFO     | all workflow threads have been joined
[2025-07-27 12:43:01] 2025-07-27 16:42:41,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:43:01] 2025-07-27 16:42:41,807 | INFO     | traces error code: 0
[2025-07-27 12:43:01] 2025-07-27 16:42:41,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:43:01] 2025-07-27 16:43:01,197 | INFO     | PID=21919 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 12:43:01] 2025-07-27 16:43:01,198 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:43:01] 2025-07-27 16:43:01,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:43:01] 2025-07-27 16:43:01,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:43:01] 2025-07-27 16:43:01,198 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:43:01] 2025-07-27 16:43:01,198 | INFO     | [monitor] control thread has ended
[2025-07-27 12:43:01] 2025-07-27 16:43:01,283 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:43:01] 2025-07-27 16:43:01,286 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:43:01] 2025-07-27 16:43:01,290 [wrapper] pilotpid: 21919
[2025-07-27 12:43:01] 2025-07-27 16:43:01,294 [wrapper] Pilot exit status: 0
[2025-07-27 12:43:01] 2025-07-27 16:43:01,310 [wrapper] pandaids: 6747411475
[2025-07-27 12:43:01] 2025-07-27 16:43:01,347 [wrapper] cleanup supervisor_pilot 14782 21920
[2025-07-27 12:43:01] 2025-07-27 16:43:01,351 [wrapper] Test setup, not cleaning
[2025-07-27 12:43:01] 2025-07-27 16:43:01,354 [wrapper] apfmon messages muted
[2025-07-27 12:43:01] 2025-07-27 16:43:01,358 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:43:01] 2025-07-27 16:43:01,362 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:43:01]  *** Error codes and diagnostics ***
[2025-07-27 12:43:01]     "exeErrorCode": 0,
[2025-07-27 12:43:01]     "exeErrorDiag": "",
[2025-07-27 12:43:01]     "pilotErrorCode": 0,
[2025-07-27 12:43:01]     "pilotErrorDiag": "",
[2025-07-27 12:43:01]  *** Listing of results directory ***
[2025-07-27 12:43:01] total 434924
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 09:04 pilot3.tar.gz
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 09:05 queuedata.json
[2025-07-27 12:43:01] -rwx------ 1 boincer umatlas     36292 Jul 27 09:06 runpilot2-wrapper.sh
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas       100 Jul 27 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:43:01] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 11:19 run_atlas
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas       105 Jul 27 11:19 job.xml
[2025-07-27 12:43:01] -rw-r--r-- 2 boincer umatlas 228473022 Jul 27 11:19 EVNT.45743347._002698.pool.root.1
[2025-07-27 12:43:01] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 11:19 start_atlas.sh
[2025-07-27 12:43:01] drwxrwx--x 2 boincer umatlas      4096 Jul 27 11:19 shared
[2025-07-27 12:43:01] -rw-r--r-- 2 boincer umatlas    542894 Jul 27 11:19 input.tar.gz
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas         0 Jul 27 11:19 boinc_lockfile
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 11:19 pandaJob.out
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas    980101 Jul 27 11:19 agis_schedconf.cvmfs.json
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas   1593052 Jul 27 11:19 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:43:01] drwx------ 4 boincer umatlas      4096 Jul 27 11:19 pilot3
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 12:36 init_data.xml
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas 211311529 Jul 27 12:41 HITS.45743349._048689.pool.root.1
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas       530 Jul 27 12:42 boinc_task_state.xml
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas      1048 Jul 27 12:42 memory_monitor_summary.json
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas    379803 Jul 27 12:42 log.45743349._048689.job.log.tgz.1
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas      7857 Jul 27 12:42 heartbeat.json
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas        27 Jul 27 12:42 wrapper_checkpoint.txt
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 12:42 boinc_mmap_file
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas       745 Jul 27 12:43 pilotlog.txt
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas        95 Jul 27 12:43 pilot_heartbeat.json
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas    473798 Jul 27 12:43 log.45743349._048689.job.log.1
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas       357 Jul 27 12:43 output.list
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas       620 Jul 27 12:43 runtime_log
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas    870400 Jul 27 12:43 result.tar.gz
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas       659 Jul 27 12:43 K02NDmVGG07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQJVLDmeI0eHn.diag
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 12:43 runtime_log.err
[2025-07-27 12:43:01] -rw-r--r-- 1 boincer umatlas     21395 Jul 27 12:43 stderr.txt
[2025-07-27 12:43:01] HITS file was successfully produced:
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas 211311529 Jul 27 12:41 shared/HITS.pool.root.1
[2025-07-27 12:43:01]  *** Contents of shared directory: ***
[2025-07-27 12:43:01] total 430884
[2025-07-27 12:43:01] -rw-r--r-- 2 boincer umatlas 228473022 Jul 27 11:19 ATLAS.root_0
[2025-07-27 12:43:01] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 11:19 start_atlas.sh
[2025-07-27 12:43:01] -rw-r--r-- 2 boincer umatlas    542894 Jul 27 11:19 input.tar.gz
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas 211311529 Jul 27 12:41 HITS.pool.root.1
[2025-07-27 12:43:01] -rw------- 1 boincer umatlas    870400 Jul 27 12:43 result.tar.gz
12:43:03 (18323): run_atlas exited; CPU time 54373.075861
12:43:03 (18323): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN