Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:08:23 (2981458): wrapper (7.7.26015): starting
08:08:23 (2981458): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 08:08:23] Arguments: --nthreads 3
[2025-07-28 08:08:23] Threads: 3
[2025-07-28 08:08:23] Checking for CVMFS
[2025-07-28 08:08:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 08:08:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 08:08:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 08:08:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 08:08:23] 2.9.2.0 1502607 5348 84880 148838 0 56 36424470 36864000 0 130560 0 3953577 99.990 190778 2054 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 08:08:23] CVMFS is ok
[2025-07-28 08:08:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 08:08:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 08:08:23] Further information can be found at the LHC@home message board.
[2025-07-28 08:08:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 08:08:23] Checking for apptainer binary...
[2025-07-28 08:08:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 08:08:23] Running /usr/bin/apptainer --version
[2025-07-28 08:08:23] apptainer version 1.4.1-1.1
[2025-07-28 08:08:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 08:08:23] thA335b
[2025-07-28 08:08:23] apptainer works
[2025-07-28 08:08:23] Set ATHENA_PROC_NUMBER=3
[2025-07-28 08:08:23] Set ATHENA_CORE_NUMBER=3
[2025-07-28 08:08:23] Starting ATLAS job with PandaID=6747177612
[2025-07-28 08:08:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 09:47:25]  *** The last 200 lines of the pilot log: ***
[2025-07-28 09:47:25]  lfn=log.45758341._000028.job.log.tgz.1
[2025-07-28 09:47:25]  mtime=0
[2025-07-28 09:47:25]  protocol_id=None
[2025-07-28 09:47:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 09:47:25]  replicas=None
[2025-07-28 09:47:25]  scope=mc23_13p6TeV
[2025-07-28 09:47:25]  status=None
[2025-07-28 09:47:25]  status_code=0
[2025-07-28 09:47:25]  storage_token=
[2025-07-28 09:47:25]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747177612/log.45758341._000028.job.log.tgz.1
[2025-07-28 09:47:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/27/log.45758341._000028.job.log.tgz.1
[2025-07-28 09:47:25]  workdir=None
[2025-07-28 09:47:25] ]
[2025-07-28 09:47:25] 2025-07-28 07:46:49,294 | INFO     | transferring file log.45758341._000028.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747177612/log.45758341._000028.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 09:47:25] 2025-07-28 07:46:49,295 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747177612/log.45758341._000028.job.log.tgz.1 /local/data/boinc/slots/0/log.45758341._0000
[2025-07-28 09:47:25] 2025-07-28 07:46:49,308 | INFO     | adding to output.list: log.45758341._000028.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/27/log.45758341._000028.job.log.tg
[2025-07-28 09:47:25] 2025-07-28 07:46:49,309 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 09:47:25] 2025-07-28 07:46:49,309 | INFO     | summary of transferred files:
[2025-07-28 09:47:25] 2025-07-28 07:46:49,309 | INFO     |  -- lfn=log.45758341._000028.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 09:47:25] 2025-07-28 07:46:49,309 | INFO     | stage-out finished correctly
[2025-07-28 09:47:25] 2025-07-28 07:46:49,699 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 09:47:25] 2025-07-28 07:46:50,545 | WARNING  | process 2991593 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 09:47:25] 2025-07-28 07:46:50,545 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747177612/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 09:47:25] 2025-07-28 07:46:50,579 | INFO     | number of running child processes to parent process 2991593: 1
[2025-07-28 09:47:25] 2025-07-28 07:46:50,580 | INFO     | maximum number of monitored processes: 6
[2025-07-28 09:47:25] 2025-07-28 07:46:50,822 | INFO     | job 6747177612 has state=finished
[2025-07-28 09:47:25] 2025-07-28 07:46:50,823 | INFO     | preparing for final server update for job 6747177612 in state='finished'
[2025-07-28 09:47:25] 2025-07-28 07:46:50,823 | INFO     | this job has now completed (state=finished)
[2025-07-28 09:47:25] 2025-07-28 07:46:50,823 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 09:47:25] 2025-07-28 07:46:50,823 | INFO     | log transfer has been attempted: DONE
[2025-07-28 09:47:25] 2025-07-28 07:46:50,823 | INFO     | job 6747177612 has finished - writing final server update
[2025-07-28 09:47:25] 2025-07-28 07:46:50,823 | INFO     | total number of processed events: 400 (read)
[2025-07-28 09:47:25] 2025-07-28 07:46:50,824 | INFO     | executing command: lscpu
[2025-07-28 09:47:25] 2025-07-28 07:46:50,836 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 09:47:25] 2025-07-28 07:46:50,852 | INFO     | PID=2985102 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 09:47:25] 2025-07-28 07:46:53,082 | INFO     | monitor loop #454: job 0:6747177612 is in state 'finished'
[2025-07-28 09:47:25] 2025-07-28 07:46:53,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 09:47:25] 2025-07-28 07:46:53,184 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 09:47:25] 2025-07-28 07:46:53,185 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3610.5516666666667
[2025-07-28 09:47:25] 2025-07-28 07:46:53,186 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747177612/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 09:47:25] 2025-07-28 07:46:53,186 | INFO     | extracted standard info from prmon json
[2025-07-28 09:47:25] 2025-07-28 07:46:53,186 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 09:47:25] 2025-07-28 07:46:53,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 09:47:25] 2025-07-28 07:46:53,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 09:47:25] 2025-07-28 07:46:53,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 09:47:25] 2025-07-28 07:46:53,187 | INFO     | fitting pss+swap vs Time
[2025-07-28 09:47:25] 2025-07-28 07:46:53,187 | INFO     | sum of square deviations: 226022842.5
[2025-07-28 09:47:25] 2025-07-28 07:46:53,187 | INFO     | sum of deviations: -994506271.5000006
[2025-07-28 09:47:25] 2025-07-28 07:46:53,187 | INFO     | mean x: 1753685948.5
[2025-07-28 09:47:25] 2025-07-28 07:46:53,187 | INFO     | mean y: 2368061.7666666666
[2025-07-28 09:47:25] 2025-07-28 07:46:53,187 | INFO     | -- intersect: 7718630961.277264
[2025-07-28 09:47:25] 2025-07-28 07:46:53,187 | INFO     | intersect: 7718630961.277264
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | chi2: 0.03344177325070315
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | -- intersect: 7718630961.277264
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | current memory leak: -4.40 B/s (using 90 data points, chi2=0.03)
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | could have reported an average CPU frequency of 3982 MHz (7 samples)
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | ..............................
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | . Timing measurements:
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | . get job = 0 s
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | . initial setup = 1 s
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | . payload setup = 3 s
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | . stage-in = 0 s
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | . payload execution = 5880 s
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | . stage-out = 0 s
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | . log creation = 0 s
[2025-07-28 09:47:25] 2025-07-28 07:46:53,188 | INFO     | ..............................
[2025-07-28 09:47:25] 2025-07-28 07:46:53,218 | INFO     | 
[2025-07-28 09:47:25] 2025-07-28 07:46:53,218 | INFO     | job summary report
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | --------------------------------------------------
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | PanDA job id: 6747177612
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | task id: 45758341
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | errors: (none)
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | pilot state: finished 
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | transexitcode: 0
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | exeerrorcode: 0
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | exeerrordiag: 
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | exitcode: 0
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | exitmsg: OK
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | cpuconsumptiontime: 16952 s
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | nevents: 400
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | neventsw: 0
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | pid: 2991593
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | pgrp: 2991593
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | corecount: 3
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | event service: False
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | sizes: {0: 2397463, 2: 2397725, 11: 2397753, 5887: 2433639, 5888: 2433639, 5891: 2433833}
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | --------------------------------------------------
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | 
[2025-07-28 09:47:25] 2025-07-28 07:46:53,219 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 09:47:25] 2025-07-28 07:46:53,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | job 6747177612 has completed (purged errors)
[2025-07-28 09:47:25] 2025-07-28 07:46:53,232 | INFO     | overall cleanup function is called
[2025-07-28 09:47:25] 2025-07-28 07:46:54,238 | INFO     | --- collectZombieJob: --- 10, [2991593]
[2025-07-28 09:47:25] 2025-07-28 07:46:54,238 | INFO     | zombie collector waiting for pid 2991593
[2025-07-28 09:47:25] 2025-07-28 07:46:54,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 09:47:25] 2025-07-28 07:46:54,238 | INFO     | collected zombie processes
[2025-07-28 09:47:25] 2025-07-28 07:46:54,238 | INFO     | will attempt to kill all subprocesses of pid=2991593
[2025-07-28 09:47:25] 2025-07-28 07:46:54,278 | INFO     | process IDs to be killed: [2991593] (in reverse order)
[2025-07-28 09:47:25] 2025-07-28 07:46:54,302 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 09:47:25] 2025-07-28 07:46:54,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 09:47:25] 2025-07-28 07:46:54,303 | INFO     | did not find any defunct processes belonging to 2991593
[2025-07-28 09:47:25] 2025-07-28 07:46:54,304 | INFO     | did not find any defunct processes belonging to 2991593
[2025-07-28 09:47:25] 2025-07-28 07:46:54,304 | INFO     | ready for new job
[2025-07-28 09:47:25] 2025-07-28 07:46:54,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 09:47:25] 2025-07-28 07:46:54,305 | INFO     | ***************************************
[2025-07-28 09:47:25] 2025-07-28 07:46:54,305 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 09:47:25] 2025-07-28 07:46:54,305 | INFO     | ***************************************
[2025-07-28 09:47:25] 2025-07-28 07:46:54,305 | INFO     | 
[2025-07-28 09:47:25] 2025-07-28 07:46:54,306 | INFO     | architecture information:
[2025-07-28 09:47:25] 2025-07-28 07:46:54,306 | INFO     | executing command: cat /etc/os-release
[2025-07-28 09:47:25] 2025-07-28 07:46:54,314 | INFO     | cat /etc/os-release:
[2025-07-28 09:47:25] NAME="CentOS Linux"
[2025-07-28 09:47:25] VERSION="7 (Core)"
[2025-07-28 09:47:25] ID="centos"
[2025-07-28 09:47:25] ID_LIKE="rhel fedora"
[2025-07-28 09:47:25] VERSION_ID="7"
[2025-07-28 09:47:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 09:47:25] ANSI_COLOR="0;31"
[2025-07-28 09:47:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 09:47:25] HOME_URL="https://www.centos.org/"
[2025-07-28 09:47:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 09:47:25] 
[2025-07-28 09:47:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 09:47:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 09:47:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 09:47:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 09:47:25] 
[2025-07-28 09:47:25] 2025-07-28 07:46:54,314 | INFO     | ***************************************
[2025-07-28 09:47:25] 2025-07-28 07:46:54,818 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 09:47:25] 2025-07-28 07:46:54,830 | INFO     | sufficient remaining disk space (364252233728 B)
[2025-07-28 09:47:25] 2025-07-28 07:46:54,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 09:47:25] 2025-07-28 07:46:54,830 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 09:47:25] 2025-07-28 07:46:54,830 | INFO     | update_server=False
[2025-07-28 09:47:25] 2025-07-28 07:46:54,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 09:47:25] 2025-07-28 07:46:54,831 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:47:25] 2025-07-28 07:46:54,831 | INFO     | aborting loop
[2025-07-28 09:47:25] 2025-07-28 07:46:54,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:47:25] 2025-07-28 07:46:54,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 09:47:25] 2025-07-28 07:46:54,985 | INFO     | all data control threads have been joined
[2025-07-28 09:47:25] 2025-07-28 07:46:55,610 | INFO     | all payload control threads have been joined
[2025-07-28 09:47:25] 2025-07-28 07:46:55,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 09:47:25] 2025-07-28 07:46:55,836 | INFO     | [job] job monitor thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:55,837 | INFO     | [job] queue monitor thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:55,837 | INFO     | [job] retrieve thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:55,991 | INFO     | [data] control thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:55,997 | INFO     | all job control threads have been joined
[2025-07-28 09:47:25] 2025-07-28 07:46:56,020 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:56,314 | INFO     | [data] copytool_in thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:56,448 | INFO     | [payload] validate_post thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:56,615 | INFO     | [payload] control thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:56,669 | INFO     | [job] validate thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:56,763 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:56,856 | INFO     | [data] copytool_out thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:56,879 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:56,947 | INFO     | [payload] failed_post thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:57,002 | INFO     | [job] control thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:46:59,746 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:47:05,390 | INFO     | job.realtimelogging is not enabled
[2025-07-28 09:47:25] 2025-07-28 07:47:06,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 09:47:25] 2025-07-28 07:47:07,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226062190400)>', '<ExcThread(monitor, started 140225422542592)>']
[2025-07-28 09:47:25] 2025-07-28 07:47:12,679 | INFO     | all workflow threads have been joined
[2025-07-28 09:47:25] 2025-07-28 07:47:12,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 09:47:25] 2025-07-28 07:47:12,680 | INFO     | traces error code: 0
[2025-07-28 09:47:25] 2025-07-28 07:47:12,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 09:47:25] 2025-07-28 07:47:24,985 | INFO     | PID=2985102 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 09:47:25] 2025-07-28 07:47:24,986 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 09:47:25] 2025-07-28 07:47:24,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 09:47:25] 2025-07-28 07:47:24,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 09:47:25] 2025-07-28 07:47:24,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 09:47:25] 2025-07-28 07:47:24,986 | INFO     | [monitor] control thread has ended
[2025-07-28 09:47:25] 2025-07-28 07:47:25,032 [wrapper] ==== pilot stdout END ====
[2025-07-28 09:47:25] 2025-07-28 07:47:25,035 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 09:47:25] 2025-07-28 07:47:25,037 [wrapper] pilotpid: 2985102
[2025-07-28 09:47:25] 2025-07-28 07:47:25,039 [wrapper] Pilot exit status: 0
[2025-07-28 09:47:25] 2025-07-28 07:47:25,047 [wrapper] pandaids: 6747177612
[2025-07-28 09:47:25] 2025-07-28 07:47:25,063 [wrapper] cleanup supervisor_pilot 3003690 2985103
[2025-07-28 09:47:25] 2025-07-28 07:47:25,066 [wrapper] Test setup, not cleaning
[2025-07-28 09:47:25] 2025-07-28 07:47:25,068 [wrapper] apfmon messages muted
[2025-07-28 09:47:25] 2025-07-28 07:47:25,071 [wrapper] ==== wrapper stdout END ====
[2025-07-28 09:47:25] 2025-07-28 07:47:25,073 [wrapper] ==== wrapper stderr END ====
[2025-07-28 09:47:25]  *** Error codes and diagnostics ***
[2025-07-28 09:47:25]     "exeErrorCode": 0,
[2025-07-28 09:47:25]     "exeErrorDiag": "",
[2025-07-28 09:47:25]     "pilotErrorCode": 0,
[2025-07-28 09:47:25]     "pilotErrorDiag": "",
[2025-07-28 09:47:25]  *** Listing of results directory ***
[2025-07-28 09:47:25] total 409600
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc    530466 Jul 27 11:06 pilot3.tar.gz
[2025-07-28 09:47:25] -rwx------ 1 boinc boinc     36292 Jul 27 11:54 runpilot2-wrapper.sh
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc      5112 Jul 27 11:54 queuedata.json
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc       100 Jul 28 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 09:47:25] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 08:08 run_atlas
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc       105 Jul 28 08:08 job.xml
[2025-07-28 09:47:25] -rw-r--r-- 2 boinc boinc 242000032 Jul 28 08:08 EVNT.45758338._000002.pool.root.1
[2025-07-28 09:47:25] -rw-r--r-- 2 boinc boinc    542871 Jul 28 08:08 input.tar.gz
[2025-07-28 09:47:25] -rw-r--r-- 2 boinc boinc     15095 Jul 28 08:08 start_atlas.sh
[2025-07-28 09:47:25] drwxrwx--x 2 boinc boinc      4096 Jul 28 08:08 shared
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc         0 Jul 28 08:08 boinc_setup_complete
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc      6449 Jul 28 08:08 init_data.xml
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc         0 Jul 28 08:08 boinc_lockfile
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc      2554 Jul 28 08:08 pandaJob.out
[2025-07-28 09:47:25] -rw------- 1 boinc boinc    980125 Jul 28 08:08 agis_schedconf.cvmfs.json
[2025-07-28 09:47:25] -rw------- 1 boinc boinc   1593052 Jul 28 08:08 agis_ddmendpoints.agis.ALL.json
[2025-07-28 09:47:25] drwx------ 4 boinc boinc      4096 Jul 28 08:08 pilot3
[2025-07-28 09:47:25] -rw------- 1 boinc boinc 171966156 Jul 28 09:46 HITS.45758341._000028.pool.root.1
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc       529 Jul 28 09:46 boinc_task_state.xml
[2025-07-28 09:47:25] -rw------- 1 boinc boinc      1014 Jul 28 09:46 memory_monitor_summary.json
[2025-07-28 09:47:25] -rw------- 1 boinc boinc    226667 Jul 28 09:46 log.45758341._000028.job.log.tgz.1
[2025-07-28 09:47:25] -rw------- 1 boinc boinc      7730 Jul 28 09:46 heartbeat.json
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc      8192 Jul 28 09:47 boinc_mmap_file
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc        27 Jul 28 09:47 wrapper_checkpoint.txt
[2025-07-28 09:47:25] -rw------- 1 boinc boinc       747 Jul 28 09:47 pilotlog.txt
[2025-07-28 09:47:25] -rw------- 1 boinc boinc        95 Jul 28 09:47 pilot_heartbeat.json
[2025-07-28 09:47:25] -rw------- 1 boinc boinc    566355 Jul 28 09:47 log.45758341._000028.job.log.1
[2025-07-28 09:47:25] -rw------- 1 boinc boinc       357 Jul 28 09:47 output.list
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc       620 Jul 28 09:47 runtime_log
[2025-07-28 09:47:25] -rw------- 1 boinc boinc    808960 Jul 28 09:47 result.tar.gz
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc      8739 Jul 28 09:47 runtime_log.err
[2025-07-28 09:47:25] -rw------- 1 boinc boinc       659 Jul 28 09:47 iGqLDmJGD07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnxULDmXU2kVm.diag
[2025-07-28 09:47:25] -rw-r--r-- 1 boinc boinc     21756 Jul 28 09:47 stderr.txt
[2025-07-28 09:47:25] HITS file was successfully produced:
[2025-07-28 09:47:25] -rw------- 1 boinc boinc 171966156 Jul 28 09:46 shared/HITS.pool.root.1
[2025-07-28 09:47:25]  *** Contents of shared directory: ***
[2025-07-28 09:47:25] total 405616
[2025-07-28 09:47:25] -rw-r--r-- 2 boinc boinc 242000032 Jul 28 08:08 ATLAS.root_0
[2025-07-28 09:47:25] -rw-r--r-- 2 boinc boinc    542871 Jul 28 08:08 input.tar.gz
[2025-07-28 09:47:25] -rw-r--r-- 2 boinc boinc     15095 Jul 28 08:08 start_atlas.sh
[2025-07-28 09:47:25] -rw------- 1 boinc boinc 171966156 Jul 28 09:46 HITS.pool.root.1
[2025-07-28 09:47:25] -rw------- 1 boinc boinc    808960 Jul 28 09:47 result.tar.gz
09:47:26 (2981458): run_atlas exited; CPU time 16969.925416
09:47:26 (2981458): called boinc_finish(0)

</stderr_txt>
]]>

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