Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
04:35:01 (1659688): wrapper (7.7.26015): starting
04:35:01 (1659688): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 04:35:01] Arguments: --nthreads 4
[2025-07-29 04:35:01] Threads: 4
[2025-07-29 04:35:01] Checking for CVMFS
[2025-07-29 04:35:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 04:35:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 04:35:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 04:35:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 04:35:01] 2.13.0.0 1642395 6 46316 148873 1 188 2954620 4096001 922 130560 0 48235 99.956 2854 1584 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-29 04:35:01] CVMFS is ok
[2025-07-29 04:35:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 04:35:01] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-29 04:35:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-29 04:35:01] Further information can be found at the LHC@home message board.
[2025-07-29 04:35:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 04:35:01] Checking for apptainer binary...
[2025-07-29 04:35:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-29 04:35:01] Running /usr/bin/apptainer --version
[2025-07-29 04:35:01] apptainer version 1.2.3
[2025-07-29 04:35:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 04:35:01] Ryzen-7-7700-Zen4-Deb12
[2025-07-29 04:35:01] apptainer works
[2025-07-29 04:35:01] Set ATHENA_PROC_NUMBER=4
[2025-07-29 04:35:01] Set ATHENA_CORE_NUMBER=4
[2025-07-29 04:35:01] Starting ATLAS job with PandaID=6747148681
[2025-07-29 04:35:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 06:03:11]  *** The last 200 lines of the pilot log: ***
[2025-07-29 06:03:11]  is_tar=False
[2025-07-29 06:03:11]  lfn=log.45743349._046628.job.log.tgz.1
[2025-07-29 06:03:11]  mtime=0
[2025-07-29 06:03:11]  protocol_id=None
[2025-07-29 06:03:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-29 06:03:11]  replicas=None
[2025-07-29 06:03:11]  scope=mc23_13p6TeV
[2025-07-29 06:03:11]  status=None
[2025-07-29 06:03:11]  status_code=0
[2025-07-29 06:03:11]  storage_token=
[2025-07-29 06:03:11]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6747148681/log.45743349._046628.job.log.tgz.1
[2025-07-29 06:03:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/5d/log.45743349._046628.job.log.tgz.1
[2025-07-29 06:03:11]  workdir=None
[2025-07-29 06:03:11] ]
[2025-07-29 06:03:11] 2025-07-29 04:02:44,683 | INFO     | transferring file log.45743349._046628.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6747148681/log.45743349._046628.job.log.tgz.1 to /var/lib/boinc
[2025-07-29 06:03:11] 2025-07-29 04:02:44,684 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6747148681/log.45743349._046628.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.457433
[2025-07-29 06:03:11] 2025-07-29 04:02:44,700 | INFO     | adding to output.list: log.45743349._046628.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/5d/log.45743349._046628.job.log.tg
[2025-07-29 06:03:11] 2025-07-29 04:02:44,700 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-29 06:03:11] 2025-07-29 04:02:44,700 | INFO     | summary of transferred files:
[2025-07-29 06:03:11] 2025-07-29 04:02:44,700 | INFO     |  -- lfn=log.45743349._046628.job.log.tgz.1, status_code=0, status=transferred
[2025-07-29 06:03:11] 2025-07-29 04:02:44,700 | INFO     | stage-out finished correctly
[2025-07-29 06:03:11] 2025-07-29 04:02:45,811 | INFO     | monitor loop #392: job 0:6747148681 is in state 'finished'
[2025-07-29 06:03:11] 2025-07-29 04:02:45,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 06:03:11] 2025-07-29 04:02:46,775 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-29 06:03:11] 2025-07-29 04:02:47,411 | INFO     | job 6747148681 has state=finished
[2025-07-29 06:03:11] 2025-07-29 04:02:47,412 | INFO     | preparing for final server update for job 6747148681 in state='finished'
[2025-07-29 06:03:11] 2025-07-29 04:02:47,412 | INFO     | this job has now completed (state=finished)
[2025-07-29 06:03:11] 2025-07-29 04:02:47,412 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-29 06:03:11] 2025-07-29 04:02:47,412 | INFO     | log transfer has been attempted: DONE
[2025-07-29 06:03:11] 2025-07-29 04:02:47,412 | INFO     | job 6747148681 has finished - writing final server update
[2025-07-29 06:03:11] 2025-07-29 04:02:47,412 | INFO     | total number of processed events: 400 (read)
[2025-07-29 06:03:11] 2025-07-29 04:02:47,413 | INFO     | executing command: lscpu
[2025-07-29 06:03:11] 2025-07-29 04:02:47,427 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-29 06:03:11] 2025-07-29 04:02:48,319 | INFO     | monitor loop #393: job 0:6747148681 is in state 'finished'
[2025-07-29 06:03:11] 2025-07-29 04:02:48,320 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 06:03:11] 2025-07-29 04:02:50,822 | INFO     | monitor loop #394: job 0:6747148681 is in state 'finished'
[2025-07-29 06:03:11] 2025-07-29 04:02:50,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 06:03:11] 2025-07-29 04:02:52,079 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-29 06:03:11] 2025-07-29 04:02:52,080 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4876.3988125
[2025-07-29 06:03:11] 2025-07-29 04:02:52,082 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6747148681/memory_monitor_summary.json (trf name=prmon)
[2025-07-29 06:03:11] 2025-07-29 04:02:52,082 | INFO     | extracted standard info from prmon json
[2025-07-29 06:03:11] 2025-07-29 04:02:52,082 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 06:03:11] 2025-07-29 04:02:52,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 06:03:11] 2025-07-29 04:02:52,082 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 06:03:11] 2025-07-29 04:02:52,082 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 06:03:11] 2025-07-29 04:02:52,083 | INFO     | fitting pss+swap vs Time
[2025-07-29 06:03:11] 2025-07-29 04:02:52,083 | INFO     | sum of square deviations: 152858680.0
[2025-07-29 06:03:11] 2025-07-29 04:02:52,083 | INFO     | sum of deviations: -4400026380.0
[2025-07-29 06:03:11] 2025-07-29 04:02:52,083 | INFO     | mean x: 1753759214.0
[2025-07-29 06:03:11] 2025-07-29 04:02:52,083 | INFO     | mean y: 2391199.1772151897
[2025-07-29 06:03:11] 2025-07-29 04:02:52,083 | INFO     | -- intersect: 50484227139.19753
[2025-07-29 06:03:11] 2025-07-29 04:02:52,083 | INFO     | intersect: 50484227139.19753
[2025-07-29 06:03:11] 2025-07-29 04:02:52,083 | INFO     | chi2: 0.011718353497717337
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | -- intersect: 50484227139.19753
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | current memory leak: -28.78 B/s (using 79 data points, chi2=0.01)
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | could have reported an average CPU frequency of 4740 MHz (6 samples)
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | ..............................
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | . Timing measurements:
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | . get job = 0 s
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | . initial setup = 1 s
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | . payload setup = 2 s
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | . stage-in = 0 s
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | . payload execution = 5233 s
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | . stage-out = 0 s
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | . log creation = 0 s
[2025-07-29 06:03:11] 2025-07-29 04:02:52,084 | INFO     | ..............................
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | 
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | job summary report
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | --------------------------------------------------
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | PanDA job id: 6747148681
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | task id: 45743349
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | errors: (none)
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | pilot state: finished 
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | transexitcode: 0
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | exeerrorcode: 0
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | exeerrordiag: 
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | exitcode: 0
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | exitmsg: OK
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | cpuconsumptiontime: 20171 s
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | nevents: 400
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | neventsw: 0
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | pid: 1670140
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | pgrp: 1670140
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | corecount: 4
[2025-07-29 06:03:11] 2025-07-29 04:02:52,148 | INFO     | event service: False
[2025-07-29 06:03:11] 2025-07-29 04:02:52,149 | INFO     | sizes: {0: 2391695, 1: 2391894, 4: 2392156, 11: 2392184, 5239: 2418786, 5240: 2427798, 5242: 2427982, 5247: 2428176}
[2025-07-29 06:03:11] 2025-07-29 04:02:52,149 | INFO     | --------------------------------------------------
[2025-07-29 06:03:11] 2025-07-29 04:02:52,149 | INFO     | 
[2025-07-29 06:03:11] 2025-07-29 04:02:52,149 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,160 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 06:03:11] 2025-07-29 04:02:52,161 | INFO     | job 6747148681 has completed (purged errors)
[2025-07-29 06:03:11] 2025-07-29 04:02:52,161 | INFO     | overall cleanup function is called
[2025-07-29 06:03:11] 2025-07-29 04:02:53,163 | INFO     | --- collectZombieJob: --- 10, [1670140]
[2025-07-29 06:03:11] 2025-07-29 04:02:53,163 | INFO     | zombie collector waiting for pid 1670140
[2025-07-29 06:03:11] 2025-07-29 04:02:53,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 06:03:11] 2025-07-29 04:02:53,164 | INFO     | collected zombie processes
[2025-07-29 06:03:11] 2025-07-29 04:02:53,164 | INFO     | will attempt to kill all subprocesses of pid=1670140
[2025-07-29 06:03:11] 2025-07-29 04:02:53,209 | INFO     | process IDs to be killed: [1670140] (in reverse order)
[2025-07-29 06:03:11] 2025-07-29 04:02:53,236 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 06:03:11] 2025-07-29 04:02:53,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 06:03:11] 2025-07-29 04:02:53,238 | INFO     | did not find any defunct processes belonging to 1670140
[2025-07-29 06:03:11] 2025-07-29 04:02:53,239 | INFO     | did not find any defunct processes belonging to 1670140
[2025-07-29 06:03:11] 2025-07-29 04:02:53,239 | INFO     | ready for new job
[2025-07-29 06:03:11] 2025-07-29 04:02:53,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 06:03:11] 2025-07-29 04:02:53,240 | INFO     | ***************************************
[2025-07-29 06:03:11] 2025-07-29 04:02:53,240 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 06:03:11] 2025-07-29 04:02:53,240 | INFO     | ***************************************
[2025-07-29 06:03:11] 2025-07-29 04:02:53,240 | INFO     | 
[2025-07-29 06:03:11] 2025-07-29 04:02:53,241 | INFO     | architecture information:
[2025-07-29 06:03:11] 2025-07-29 04:02:53,241 | INFO     | executing command: cat /etc/os-release
[2025-07-29 06:03:11] 2025-07-29 04:02:53,249 | INFO     | cat /etc/os-release:
[2025-07-29 06:03:11] NAME="CentOS Linux"
[2025-07-29 06:03:11] VERSION="7 (Core)"
[2025-07-29 06:03:11] ID="centos"
[2025-07-29 06:03:11] ID_LIKE="rhel fedora"
[2025-07-29 06:03:11] VERSION_ID="7"
[2025-07-29 06:03:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 06:03:11] ANSI_COLOR="0;31"
[2025-07-29 06:03:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 06:03:11] HOME_URL="https://www.centos.org/"
[2025-07-29 06:03:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 06:03:11] 
[2025-07-29 06:03:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 06:03:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 06:03:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 06:03:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 06:03:11] 
[2025-07-29 06:03:11] 2025-07-29 04:02:53,249 | INFO     | ***************************************
[2025-07-29 06:03:11] 2025-07-29 04:02:53,751 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-07-29 06:03:11] 2025-07-29 04:02:53,761 | INFO     | sufficient remaining disk space (884462321664 B)
[2025-07-29 06:03:11] 2025-07-29 04:02:53,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 06:03:11] 2025-07-29 04:02:53,761 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 06:03:11] 2025-07-29 04:02:53,761 | INFO     | update_server=False
[2025-07-29 06:03:11] 2025-07-29 04:02:53,761 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 06:03:11] 2025-07-29 04:02:53,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 06:03:11] 2025-07-29 04:02:53,761 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-29 06:03:11] 2025-07-29 04:02:53,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 06:03:11] 2025-07-29 04:02:53,762 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 06:03:11] 2025-07-29 04:02:53,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 06:03:11] 2025-07-29 04:02:53,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 06:03:11] 2025-07-29 04:02:53,807 | INFO     | all data control threads have been joined
[2025-07-29 06:03:11] 2025-07-29 04:02:54,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 06:03:11] 2025-07-29 04:02:54,327 | INFO     | aborting loop
[2025-07-29 06:03:11] 2025-07-29 04:02:54,763 | INFO     | [job] retrieve thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:54,764 | INFO     | [job] queue monitor thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:54,815 | INFO     | [data] control thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:54,947 | INFO     | all payload control threads have been joined
[2025-07-29 06:03:11] 2025-07-29 04:02:54,964 | INFO     | [payload] validate_post thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:55,048 | INFO     | all job control threads have been joined
[2025-07-29 06:03:11] 2025-07-29 04:02:55,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 06:03:11] 2025-07-29 04:02:55,331 | INFO     | [job] job monitor thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:55,495 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:55,547 | INFO     | [job] validate thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:55,739 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:55,771 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:55,915 | INFO     | [data] copytool_in thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:55,951 | INFO     | [payload] control thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:56,051 | INFO     | [job] control thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:56,115 | INFO     | [payload] failed_post thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:57,259 | INFO     | [data] copytool_out thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:02:57,766 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:03:03,887 | INFO     | job.realtimelogging is not enabled
[2025-07-29 06:03:11] 2025-07-29 04:03:04,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 06:03:11] 2025-07-29 04:03:06,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764876117824)>', '<ExcThread(monitor, started 139764367861504)>']
[2025-07-29 06:03:11] 2025-07-29 04:03:06,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 06:03:11] 2025-07-29 04:03:06,812 | INFO     | [monitor] control thread has ended
[2025-07-29 06:03:11] 2025-07-29 04:03:11,483 | INFO     | all workflow threads have been joined
[2025-07-29 06:03:11] 2025-07-29 04:03:11,483 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 06:03:11] 2025-07-29 04:03:11,484 | INFO     | traces error code: 0
[2025-07-29 06:03:11] 2025-07-29 04:03:11,484 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 06:03:11] 2025-07-29 04:03:11,533 [wrapper] ==== pilot stdout END ====
[2025-07-29 06:03:11] 2025-07-29 04:03:11,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 06:03:11] 2025-07-29 04:03:11,535 [wrapper] pilotpid: 1663619
[2025-07-29 06:03:11] 2025-07-29 04:03:11,536 [wrapper] Pilot exit status: 0
[2025-07-29 06:03:11] 2025-07-29 04:03:11,540 [wrapper] pandaids: 6747148681
[2025-07-29 06:03:11] 2025-07-29 04:03:11,554 [wrapper] cleanup supervisor_pilot 1731896 1663620
[2025-07-29 06:03:11] 2025-07-29 04:03:11,556 [wrapper] Test setup, not cleaning
[2025-07-29 06:03:11] 2025-07-29 04:03:11,557 [wrapper] apfmon messages muted
[2025-07-29 06:03:11] 2025-07-29 04:03:11,558 [wrapper] ==== wrapper stdout END ====
[2025-07-29 06:03:11] 2025-07-29 04:03:11,559 [wrapper] ==== wrapper stderr END ====
[2025-07-29 06:03:11]  *** Error codes and diagnostics ***
[2025-07-29 06:03:11]     "exeErrorCode": 0,
[2025-07-29 06:03:11]     "exeErrorDiag": "",
[2025-07-29 06:03:11]     "pilotErrorCode": 0,
[2025-07-29 06:03:11]     "pilotErrorDiag": "",
[2025-07-29 06:03:11]  *** Listing of results directory ***
[2025-07-29 06:03:11] total 350268
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc    530466 Jul 27 11:06 pilot3.tar.gz
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc      5112 Jul 27 11:43 queuedata.json
[2025-07-29 06:03:11] -rwx------ 1 boinc boinc     36292 Jul 27 11:46 runpilot2-wrapper.sh
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc       100 Jul 29 04:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 06:03:11] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 04:35 run_atlas
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc       105 Jul 29 04:35 job.xml
[2025-07-29 06:03:11] -rw-r--r-- 2 boinc boinc 145698021 Jul 29 04:35 EVNT.45743347._001584.pool.root.1
[2025-07-29 06:03:11] -rw-r--r-- 2 boinc boinc     15095 Jul 29 04:35 start_atlas.sh
[2025-07-29 06:03:11] drwxrwx--x 2 boinc boinc      4096 Jul 29 04:35 shared
[2025-07-29 06:03:11] -rw-r--r-- 2 boinc boinc    542905 Jul 29 04:35 input.tar.gz
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc      9223 Jul 29 04:35 init_data.xml
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc         0 Jul 29 04:35 boinc_lockfile
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc      2563 Jul 29 04:35 pandaJob.out
[2025-07-29 06:03:11] -rw------- 1 boinc boinc    977340 Jul 29 04:35 agis_schedconf.cvmfs.json
[2025-07-29 06:03:11] -rw------- 1 boinc boinc   1589827 Jul 29 04:35 agis_ddmendpoints.agis.ALL.json
[2025-07-29 06:03:11] drwx------ 4 boinc boinc      4096 Jul 29 04:35 pilot3
[2025-07-29 06:03:11] -rw------- 1 boinc boinc        95 Jul 29 06:02 pilot_heartbeat.json
[2025-07-29 06:03:11] -rw------- 1 boinc boinc 207561324 Jul 29 06:02 HITS.45743349._046628.pool.root.1
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc       529 Jul 29 06:02 boinc_task_state.xml
[2025-07-29 06:03:11] -rw------- 1 boinc boinc      1018 Jul 29 06:02 memory_monitor_summary.json
[2025-07-29 06:03:11] -rw------- 1 boinc boinc    244190 Jul 29 06:02 log.45743349._046628.job.log.tgz.1
[2025-07-29 06:03:11] -rw------- 1 boinc boinc      7753 Jul 29 06:02 heartbeat.json
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc      8192 Jul 29 06:02 boinc_mmap_file
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc        27 Jul 29 06:02 wrapper_checkpoint.txt
[2025-07-29 06:03:11] -rw------- 1 boinc boinc      4560 Jul 29 06:03 pilotlog.txt
[2025-07-29 06:03:11] -rw------- 1 boinc boinc    522303 Jul 29 06:03 log.45743349._046628.job.log.1
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc       620 Jul 29 06:03 runtime_log
[2025-07-29 06:03:11] -rw------- 1 boinc boinc    788480 Jul 29 06:03 result.tar.gz
[2025-07-29 06:03:11] -rw------- 1 boinc boinc       357 Jul 29 06:03 output.list
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc      8783 Jul 29 06:03 runtime_log.err
[2025-07-29 06:03:11] -rw------- 1 boinc boinc       655 Jul 29 06:03 OUZMDmK8C07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9wULDmValekn.diag
[2025-07-29 06:03:11] -rw-r--r-- 1 boinc boinc     21603 Jul 29 06:03 stderr.txt
[2025-07-29 06:03:11] HITS file was successfully produced:
[2025-07-29 06:03:11] -rw------- 1 boinc boinc 207561324 Jul 29 06:02 shared/HITS.pool.root.1
[2025-07-29 06:03:11]  *** Contents of shared directory: ***
[2025-07-29 06:03:11] total 346308
[2025-07-29 06:03:11] -rw-r--r-- 2 boinc boinc 145698021 Jul 29 04:35 ATLAS.root_0
[2025-07-29 06:03:11] -rw-r--r-- 2 boinc boinc     15095 Jul 29 04:35 start_atlas.sh
[2025-07-29 06:03:11] -rw-r--r-- 2 boinc boinc    542905 Jul 29 04:35 input.tar.gz
[2025-07-29 06:03:11] -rw------- 1 boinc boinc 207561324 Jul 29 06:02 HITS.pool.root.1
[2025-07-29 06:03:11] -rw------- 1 boinc boinc    788480 Jul 29 06:03 result.tar.gz
06:03:13 (1659688): run_atlas exited; CPU time 20193.923621
06:03:13 (1659688): called boinc_finish(0)

</stderr_txt>
]]>

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