Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:23:36 (3696): wrapper (7.7.26015): starting
11:23:36 (3696): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 11:23:36] Arguments: --nthreads 8
[2025-07-27 11:23:36] Threads: 8
[2025-07-27 11:23:36] Checking for CVMFS
[2025-07-27 11:23:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 11:23:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 11:23:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 11:23:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 11:23:36] 2.11.2.0 2991 112177 85804 148817 3 56 16101972 20275200 1 130560 0 28304966 99.962 9262522 10684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 11:23:36] CVMFS is ok
[2025-07-27 11:23:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 11:23:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 11:23:36] Further information can be found at the LHC@home message board.
[2025-07-27 11:23:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:23:36] Checking for apptainer binary...
[2025-07-27 11:23:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 11:23:36] Running /usr/bin/apptainer --version
[2025-07-27 11:23:36] apptainer version 1.3.2-1.el7
[2025-07-27 11:23:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:23:38] c-115-15.aglt2.org
[2025-07-27 11:23:38] apptainer works
[2025-07-27 11:23:38] Set ATHENA_PROC_NUMBER=8
[2025-07-27 11:23:38] Set ATHENA_CORE_NUMBER=8
[2025-07-27 11:23:38] Starting ATLAS job with PandaID=6747154317
[2025-07-27 11:23:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:34:59]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:34:59] 2025-07-27 17:34:21,686 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 13:34:59] 2025-07-27 17:34:23,135 | INFO     | monitor loop #578: job 0:6747154317 is in state 'finished'
[2025-07-27 13:34:59] 2025-07-27 17:34:23,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:34:59] 2025-07-27 17:34:25,639 | INFO     | monitor loop #579: job 0:6747154317 is in state 'finished'
[2025-07-27 13:34:59] 2025-07-27 17:34:25,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:34:59] 2025-07-27 17:34:27,075 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 13:34:59] 2025-07-27 17:34:27,079 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-07-27 13:34:59] 2025-07-27 17:34:27,081 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747154317/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:34:59] 2025-07-27 17:34:27,082 | INFO     | extracted standard info from prmon json
[2025-07-27 13:34:59] 2025-07-27 17:34:27,082 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:34:59] 2025-07-27 17:34:27,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:34:59] 2025-07-27 17:34:27,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:34:59] 2025-07-27 17:34:27,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:34:59] 2025-07-27 17:34:27,085 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:34:59] 2025-07-27 17:34:27,085 | INFO     | sum of square deviations: 650252192.0
[2025-07-27 13:34:59] 2025-07-27 17:34:27,086 | INFO     | sum of deviations: -6442833511.5
[2025-07-27 13:34:59] 2025-07-27 17:34:27,086 | INFO     | mean x: 1753633740.5
[2025-07-27 13:34:59] 2025-07-27 17:34:27,086 | INFO     | mean y: 2572116.5078125
[2025-07-27 13:34:59] 2025-07-27 17:34:27,086 | INFO     | -- intersect: 17377938734.55759
[2025-07-27 13:34:59] 2025-07-27 17:34:27,087 | INFO     | intersect: 17377938734.55759
[2025-07-27 13:34:59] 2025-07-27 17:34:27,087 | INFO     | chi2: 1.5994506697700175
[2025-07-27 13:34:59] 2025-07-27 17:34:27,087 | INFO     | sum of square deviations: 576985702.0
[2025-07-27 13:34:59] 2025-07-27 17:34:27,088 | INFO     | sum of deviations: -5483683510.999998
[2025-07-27 13:34:59] 2025-07-27 17:34:27,088 | INFO     | mean x: 1753633588.0
[2025-07-27 13:34:59] 2025-07-27 17:34:27,088 | INFO     | mean y: 2574114.7804878047
[2025-07-27 13:34:59] 2025-07-27 17:34:27,088 | INFO     | -- intersect: 16669142380.715376
[2025-07-27 13:34:59] 2025-07-27 17:34:27,088 | INFO     | intersect: 16669142380.715376
[2025-07-27 13:34:59] 2025-07-27 17:34:27,088 | INFO     | chi2: 1.6004168612399674
[2025-07-27 13:34:59] 2025-07-27 17:34:27,089 | INFO     | current chi2=1.6004168612399674 (change=-0.060407706734015416 %)
[2025-07-27 13:34:59] 2025-07-27 17:34:27,089 | INFO     | right removable region: 122
[2025-07-27 13:34:59] 2025-07-27 17:34:27,089 | INFO     | sum of square deviations: 576985702.0
[2025-07-27 13:34:59] 2025-07-27 17:34:27,089 | INFO     | sum of deviations: -25671073469.999996
[2025-07-27 13:34:59] 2025-07-27 17:34:27,090 | INFO     | mean x: 1753633893.0
[2025-07-27 13:34:59] 2025-07-27 17:34:27,090 | INFO     | mean y: 2611428.073170732
[2025-07-27 13:34:59] 2025-07-27 17:34:27,090 | INFO     | -- intersect: 78024760591.6327
[2025-07-27 13:34:59] 2025-07-27 17:34:27,090 | INFO     | intersect: 78024760591.6327
[2025-07-27 13:34:59] 2025-07-27 17:34:27,090 | INFO     | chi2: 0.1416882386797441
[2025-07-27 13:34:59] 2025-07-27 17:34:27,090 | INFO     | current chi2=0.1416882386797441 (change=91.14144366202197 %)
[2025-07-27 13:34:59] 2025-07-27 17:34:27,090 | INFO     | sum of square deviations: 509440249.5
[2025-07-27 13:34:59] 2025-07-27 17:34:27,091 | INFO     | sum of deviations: -25799980866.000004
[2025-07-27 13:34:59] 2025-07-27 17:34:27,091 | INFO     | mean x: 1753634045.5
[2025-07-27 13:34:59] 2025-07-27 17:34:27,091 | INFO     | mean y: 2611590.186440678
[2025-07-27 13:34:59] 2025-07-27 17:34:27,091 | INFO     | -- intersect: 88813271651.44292
[2025-07-27 13:34:59] 2025-07-27 17:34:27,092 | INFO     | intersect: 88813271651.44292
[2025-07-27 13:34:59] 2025-07-27 17:34:27,092 | INFO     | chi2: 0.10644389272693568
[2025-07-27 13:34:59] 2025-07-27 17:34:27,092 | INFO     | current chi2=0.10644389272693568 (change=24.87457412218293 %)
[2025-07-27 13:34:59] 2025-07-27 17:34:27,092 | INFO     | left removable region: 20
[2025-07-27 13:34:59] 2025-07-27 17:34:27,092 | INFO     | sum of square deviations: 329031285.5
[2025-07-27 13:34:59] 2025-07-27 17:34:27,093 | INFO     | sum of deviations: -18398521435.5
[2025-07-27 13:34:59] 2025-07-27 17:34:27,093 | INFO     | mean x: 1753634167.5
[2025-07-27 13:34:59] 2025-07-27 17:34:27,093 | INFO     | mean y: 2600585.8921568627
[2025-07-27 13:34:59] 2025-07-27 17:34:27,093 | INFO     | -- intersect: 98060983610.91287
[2025-07-27 13:34:59] 2025-07-27 17:34:27,093 | INFO     | intersect: 98060983610.91287
[2025-07-27 13:34:59] 2025-07-27 17:34:27,093 | INFO     | chi2: 0.09814004732768287
[2025-07-27 13:34:59] 2025-07-27 17:34:27,093 | INFO     | -- intersect: 98060983610.91287
[2025-07-27 13:34:59] 2025-07-27 17:34:27,094 | INFO     | current memory leak: -55.92 B/s (using 102 data points, chi2=0.10)
[2025-07-27 13:34:59] 2025-07-27 17:34:27,094 | INFO     | could have reported an average CPU frequency of 2141 MHz (8 samples)
[2025-07-27 13:34:59] 2025-07-27 17:34:27,094 | INFO     | ..............................
[2025-07-27 13:34:59] 2025-07-27 17:34:27,094 | INFO     | . Timing measurements:
[2025-07-27 13:34:59] 2025-07-27 17:34:27,094 | INFO     | . get job = 0 s
[2025-07-27 13:34:59] 2025-07-27 17:34:27,094 | INFO     | . initial setup = 2 s
[2025-07-27 13:34:59] 2025-07-27 17:34:27,095 | INFO     | . payload setup = 11 s
[2025-07-27 13:34:59] 2025-07-27 17:34:27,095 | INFO     | . stage-in = 0 s
[2025-07-27 13:34:59] 2025-07-27 17:34:27,095 | INFO     | . payload execution = 7794 s
[2025-07-27 13:34:59] 2025-07-27 17:34:27,095 | INFO     | . stage-out = 0 s
[2025-07-27 13:34:59] 2025-07-27 17:34:27,095 | INFO     | . log creation = 0 s
[2025-07-27 13:34:59] 2025-07-27 17:34:27,095 | INFO     | ..............................
[2025-07-27 13:34:59] 2025-07-27 17:34:27,184 | INFO     | 
[2025-07-27 13:34:59] 2025-07-27 17:34:27,184 | INFO     | job summary report
[2025-07-27 13:34:59] 2025-07-27 17:34:27,184 | INFO     | --------------------------------------------------
[2025-07-27 13:34:59] 2025-07-27 17:34:27,185 | INFO     | PanDA job id: 6747154317
[2025-07-27 13:34:59] 2025-07-27 17:34:27,185 | INFO     | task id: 45743349
[2025-07-27 13:34:59] 2025-07-27 17:34:27,185 | INFO     | errors: (none)
[2025-07-27 13:34:59] 2025-07-27 17:34:27,185 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:34:59] 2025-07-27 17:34:27,185 | INFO     | pilot state: finished 
[2025-07-27 13:34:59] 2025-07-27 17:34:27,186 | INFO     | transexitcode: 0
[2025-07-27 13:34:59] 2025-07-27 17:34:27,186 | INFO     | exeerrorcode: 0
[2025-07-27 13:34:59] 2025-07-27 17:34:27,186 | INFO     | exeerrordiag: 
[2025-07-27 13:34:59] 2025-07-27 17:34:27,186 | INFO     | exitcode: 0
[2025-07-27 13:34:59] 2025-07-27 17:34:27,186 | INFO     | exitmsg: OK
[2025-07-27 13:34:59] 2025-07-27 17:34:27,186 | INFO     | cpuconsumptiontime: 58122 s
[2025-07-27 13:34:59] 2025-07-27 17:34:27,187 | INFO     | nevents: 400
[2025-07-27 13:34:59] 2025-07-27 17:34:27,187 | INFO     | neventsw: 0
[2025-07-27 13:34:59] 2025-07-27 17:34:27,187 | INFO     | pid: 13778
[2025-07-27 13:34:59] 2025-07-27 17:34:27,187 | INFO     | pgrp: 13778
[2025-07-27 13:34:59] 2025-07-27 17:34:27,187 | INFO     | corecount: 8
[2025-07-27 13:34:59] 2025-07-27 17:34:27,187 | INFO     | event service: False
[2025-07-27 13:34:59] 2025-07-27 17:34:27,188 | INFO     | sizes: {0: 2397419, 6: 2397681, 11: 2397709, 7809: 2425338, 7810: 2434391, 7811: 2434391, 7817: 2434713}
[2025-07-27 13:34:59] 2025-07-27 17:34:27,188 | INFO     | --------------------------------------------------
[2025-07-27 13:34:59] 2025-07-27 17:34:27,188 | INFO     | 
[2025-07-27 13:34:59] 2025-07-27 17:34:27,188 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 13:34:59] 2025-07-27 17:34:27,216 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,216 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,217 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,217 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,217 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,217 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,217 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,219 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:34:59] 2025-07-27 17:34:27,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,220 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:34:59] 2025-07-27 17:34:27,220 | INFO     | job 6747154317 has completed (purged errors)
[2025-07-27 13:34:59] 2025-07-27 17:34:27,220 | INFO     | overall cleanup function is called
[2025-07-27 13:34:59] 2025-07-27 17:34:28,228 | INFO     | --- collectZombieJob: --- 10, [13778]
[2025-07-27 13:34:59] 2025-07-27 17:34:28,229 | INFO     | zombie collector waiting for pid 13778
[2025-07-27 13:34:59] 2025-07-27 17:34:28,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:34:59] 2025-07-27 17:34:28,229 | INFO     | collected zombie processes
[2025-07-27 13:34:59] 2025-07-27 17:34:28,229 | INFO     | will attempt to kill all subprocesses of pid=13778
[2025-07-27 13:34:59] 2025-07-27 17:34:28,313 | INFO     | process IDs to be killed: [13778] (in reverse order)
[2025-07-27 13:34:59] 2025-07-27 17:34:28,366 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:34:59] 2025-07-27 17:34:28,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:34:59] 2025-07-27 17:34:28,369 | INFO     | did not find any defunct processes belonging to 13778
[2025-07-27 13:34:59] 2025-07-27 17:34:28,372 | INFO     | did not find any defunct processes belonging to 13778
[2025-07-27 13:34:59] 2025-07-27 17:34:28,372 | INFO     | ready for new job
[2025-07-27 13:34:59] 2025-07-27 17:34:28,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:34:59] 2025-07-27 17:34:28,374 | INFO     | ***************************************
[2025-07-27 13:34:59] 2025-07-27 17:34:28,374 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:34:59] 2025-07-27 17:34:28,374 | INFO     | ***************************************
[2025-07-27 13:34:59] 2025-07-27 17:34:28,374 | INFO     | 
[2025-07-27 13:34:59] 2025-07-27 17:34:28,375 | INFO     | architecture information:
[2025-07-27 13:34:59] 2025-07-27 17:34:28,375 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:34:59] 2025-07-27 17:34:28,393 | INFO     | cat /etc/os-release:
[2025-07-27 13:34:59] NAME="CentOS Linux"
[2025-07-27 13:34:59] VERSION="7 (Core)"
[2025-07-27 13:34:59] ID="centos"
[2025-07-27 13:34:59] ID_LIKE="rhel fedora"
[2025-07-27 13:34:59] VERSION_ID="7"
[2025-07-27 13:34:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:34:59] ANSI_COLOR="0;31"
[2025-07-27 13:34:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:34:59] HOME_URL="https://www.centos.org/"
[2025-07-27 13:34:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:34:59] 
[2025-07-27 13:34:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:34:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:34:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:34:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:34:59] 
[2025-07-27 13:34:59] 2025-07-27 17:34:28,393 | INFO     | ***************************************
[2025-07-27 13:34:59] 2025-07-27 17:34:28,897 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 13:34:59] 2025-07-27 17:34:28,918 | INFO     | sufficient remaining disk space (18573426688 B)
[2025-07-27 13:34:59] 2025-07-27 17:34:28,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:34:59] 2025-07-27 17:34:28,918 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:34:59] 2025-07-27 17:34:28,919 | INFO     | update_server=False
[2025-07-27 13:34:59] 2025-07-27 17:34:28,919 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:34:59] 2025-07-27 17:34:28,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:34:59] 2025-07-27 17:34:28,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:34:59] 2025-07-27 17:34:28,990 | INFO     | all data control threads have been joined
[2025-07-27 13:34:59] 2025-07-27 17:34:29,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:34:59] 2025-07-27 17:34:29,148 | INFO     | aborting loop
[2025-07-27 13:34:59] 2025-07-27 17:34:29,439 | INFO     | all job control threads have been joined
[2025-07-27 13:34:59] 2025-07-27 17:34:29,924 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:29,925 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:29,974 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:29,996 | INFO     | [data] control thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:30,023 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:30,032 | INFO     | all payload control threads have been joined
[2025-07-27 13:34:59] 2025-07-27 17:34:30,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:30,153 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:30,443 | INFO     | [job] control thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:30,757 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:30,865 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:30,925 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:30,929 | INFO     | [job] validate thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:31,033 | INFO     | [payload] control thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:31,045 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:31,251 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:31,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:34:59] 2025-07-27 17:34:35,530 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:34:59] 2025-07-27 17:34:37,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730485589824)>', '<ExcThread(monitor, started 139729370605312)>']
[2025-07-27 13:34:59] 2025-07-27 17:34:42,176 | INFO     | all workflow threads have been joined
[2025-07-27 13:34:59] 2025-07-27 17:34:42,181 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:34:59] 2025-07-27 17:34:42,181 | INFO     | traces error code: 0
[2025-07-27 13:34:59] 2025-07-27 17:34:42,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:34:59] 2025-07-27 17:34:58,678 | INFO     | PID=7300 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 13:34:59] 2025-07-27 17:34:58,679 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:34:59] 2025-07-27 17:34:58,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:34:59] 2025-07-27 17:34:58,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:34:59] 2025-07-27 17:34:58,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:34:59] 2025-07-27 17:34:58,680 | INFO     | [monitor] control thread has ended
[2025-07-27 13:34:59] 2025-07-27 17:34:58,799 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:34:59] 2025-07-27 17:34:58,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:34:59] 2025-07-27 17:34:58,810 [wrapper] pilotpid: 7300
[2025-07-27 13:34:59] 2025-07-27 17:34:58,814 [wrapper] Pilot exit status: 0
[2025-07-27 13:34:59] 2025-07-27 17:34:58,833 [wrapper] pandaids: 6747154317
[2025-07-27 13:34:59] 2025-07-27 17:34:58,876 [wrapper] cleanup supervisor_pilot 28389 7301
[2025-07-27 13:34:59] 2025-07-27 17:34:58,881 [wrapper] Test setup, not cleaning
[2025-07-27 13:34:59] 2025-07-27 17:34:58,885 [wrapper] apfmon messages muted
[2025-07-27 13:34:59] 2025-07-27 17:34:58,890 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:34:59] 2025-07-27 17:34:58,895 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:34:59]  *** Error codes and diagnostics ***
[2025-07-27 13:34:59]     "exeErrorCode": 0,
[2025-07-27 13:34:59]     "exeErrorDiag": "",
[2025-07-27 13:34:59]     "pilotErrorCode": 0,
[2025-07-27 13:34:59]     "pilotErrorDiag": "",
[2025-07-27 13:34:59]  *** Listing of results directory ***
[2025-07-27 13:34:59] total 432216
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 05:06 pilot3.tar.gz
[2025-07-27 13:34:59] -rwx------ 1 boincer umatlas     36292 Jul 27 05:46 runpilot2-wrapper.sh
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 05:46 queuedata.json
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas       100 Jul 27 11:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:34:59] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 11:23 run_atlas
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas       105 Jul 27 11:23 job.xml
[2025-07-27 13:34:59] -rw-r--r-- 2 boincer umatlas 229299448 Jul 27 11:23 EVNT.45743347._001666.pool.root.1
[2025-07-27 13:34:59] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 11:23 start_atlas.sh
[2025-07-27 13:34:59] drwxrwx--x 2 boincer umatlas      4096 Jul 27 11:23 shared
[2025-07-27 13:34:59] -rw-r--r-- 2 boincer umatlas    542892 Jul 27 11:23 input.tar.gz
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas         0 Jul 27 11:23 boinc_lockfile
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas      2560 Jul 27 11:23 pandaJob.out
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas    980101 Jul 27 11:23 agis_schedconf.cvmfs.json
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas   1593052 Jul 27 11:23 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:34:59] drwx------ 4 boincer umatlas      4096 Jul 27 11:23 pilot3
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas      5825 Jul 27 13:30 init_data.xml
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas 207341881 Jul 27 13:33 HITS.45743349._046644.pool.root.1
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas       529 Jul 27 13:34 boinc_task_state.xml
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas      1050 Jul 27 13:34 memory_monitor_summary.json
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas    318470 Jul 27 13:34 log.45743349._046644.job.log.tgz.1
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas      7847 Jul 27 13:34 heartbeat.json
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 13:34 boinc_mmap_file
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas        27 Jul 27 13:34 wrapper_checkpoint.txt
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas        95 Jul 27 13:34 pilot_heartbeat.json
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas       744 Jul 27 13:34 pilotlog.txt
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas    716896 Jul 27 13:34 log.45743349._046644.job.log.1
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas       357 Jul 27 13:34 output.list
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas       620 Jul 27 13:34 runtime_log
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas   1054720 Jul 27 13:34 result.tar.gz
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 13:34 runtime_log.err
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas       660 Jul 27 13:34 bRkMDmT8C07n9Rq4apOajLDm4fhM0noT9bVof3QYDmdM2KDmF4VyRm.diag
[2025-07-27 13:34:59] -rw-r--r-- 1 boincer umatlas     21233 Jul 27 13:34 stderr.txt
[2025-07-27 13:34:59] HITS file was successfully produced:
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas 207341881 Jul 27 13:33 shared/HITS.pool.root.1
[2025-07-27 13:34:59]  *** Contents of shared directory: ***
[2025-07-27 13:34:59] total 427996
[2025-07-27 13:34:59] -rw-r--r-- 2 boincer umatlas 229299448 Jul 27 11:23 ATLAS.root_0
[2025-07-27 13:34:59] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 11:23 start_atlas.sh
[2025-07-27 13:34:59] -rw-r--r-- 2 boincer umatlas    542892 Jul 27 11:23 input.tar.gz
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas 207341881 Jul 27 13:33 HITS.pool.root.1
[2025-07-27 13:34:59] -rw------- 1 boincer umatlas   1054720 Jul 27 13:34 result.tar.gz
13:35:00 (3696): run_atlas exited; CPU time 58072.883072
13:35:00 (3696): called boinc_finish(0)

</stderr_txt>
]]>

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