Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:02:54 (746414): wrapper (7.7.26015): starting
06:02:54 (746414): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 06:02:54] Arguments: --nthreads 4
[2025-07-28 06:02:54] Threads: 4
[2025-07-28 06:02:54] Checking for CVMFS
[2025-07-28 06:02:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 06:02:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 06:02:55] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 06:02:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 06:02:55] 2.9.2.0 3030 2340 91104 148834 1 57 36145585 36864001 0 130560 0 1953798 99.992 77997 1295 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 06:02:55] CVMFS is ok
[2025-07-28 06:02:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 06:02:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 06:02:55] Further information can be found at the LHC@home message board.
[2025-07-28 06:02:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 06:02:55] Checking for apptainer binary...
[2025-07-28 06:02:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 06:02:55] Running /usr/bin/apptainer --version
[2025-07-28 06:02:55] apptainer version 1.4.1-1.1
[2025-07-28 06:02:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 06:02:55] thA383a
[2025-07-28 06:02:55] apptainer works
[2025-07-28 06:02:55] Set ATHENA_PROC_NUMBER=4
[2025-07-28 06:02:55] Set ATHENA_CORE_NUMBER=4
[2025-07-28 06:02:55] Starting ATLAS job with PandaID=6746834674
[2025-07-28 06:02:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 07:23:36]  *** The last 200 lines of the pilot log: ***
[2025-07-28 07:23:36]  lfn=log.45743349._046420.job.log.tgz.1
[2025-07-28 07:23:36]  mtime=0
[2025-07-28 07:23:36]  protocol_id=None
[2025-07-28 07:23:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 07:23:36]  replicas=None
[2025-07-28 07:23:36]  scope=mc23_13p6TeV
[2025-07-28 07:23:36]  status=None
[2025-07-28 07:23:36]  status_code=0
[2025-07-28 07:23:36]  storage_token=
[2025-07-28 07:23:36]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6746834674/log.45743349._046420.job.log.tgz.1
[2025-07-28 07:23:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/eb/log.45743349._046420.job.log.tgz.1
[2025-07-28 07:23:36]  workdir=None
[2025-07-28 07:23:36] ]
[2025-07-28 07:23:36] 2025-07-28 05:22:59,680 | INFO     | transferring file log.45743349._046420.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6746834674/log.45743349._046420.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 07:23:36] 2025-07-28 05:22:59,680 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6746834674/log.45743349._046420.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0464
[2025-07-28 07:23:36] 2025-07-28 05:22:59,699 | INFO     | adding to output.list: log.45743349._046420.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/eb/log.45743349._046420.job.log.tg
[2025-07-28 07:23:36] 2025-07-28 05:22:59,699 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 07:23:36] 2025-07-28 05:22:59,700 | INFO     | summary of transferred files:
[2025-07-28 07:23:36] 2025-07-28 05:22:59,700 | INFO     |  -- lfn=log.45743349._046420.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 07:23:36] 2025-07-28 05:22:59,700 | INFO     | stage-out finished correctly
[2025-07-28 07:23:36] 2025-07-28 05:23:00,244 | INFO     | monitor loop #369: job 0:6746834674 is in state 'finished'
[2025-07-28 07:23:36] 2025-07-28 05:23:00,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 07:23:36] 2025-07-28 05:23:00,569 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 07:23:36] 2025-07-28 05:23:00,611 | INFO     | job 6746834674 has state=finished
[2025-07-28 07:23:36] 2025-07-28 05:23:00,611 | INFO     | preparing for final server update for job 6746834674 in state='finished'
[2025-07-28 07:23:36] 2025-07-28 05:23:00,612 | INFO     | this job has now completed (state=finished)
[2025-07-28 07:23:36] 2025-07-28 05:23:00,612 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 07:23:36] 2025-07-28 05:23:00,612 | INFO     | log transfer has been attempted: DONE
[2025-07-28 07:23:36] 2025-07-28 05:23:00,612 | INFO     | job 6746834674 has finished - writing final server update
[2025-07-28 07:23:36] 2025-07-28 05:23:00,612 | INFO     | total number of processed events: 400 (read)
[2025-07-28 07:23:36] 2025-07-28 05:23:00,613 | INFO     | executing command: lscpu
[2025-07-28 07:23:36] 2025-07-28 05:23:00,632 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 07:23:36] 2025-07-28 05:23:02,582 | INFO     | PID=750127 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 07:23:36] 2025-07-28 05:23:02,747 | INFO     | monitor loop #370: job 0:6746834674 is in state 'finished'
[2025-07-28 07:23:36] 2025-07-28 05:23:02,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 07:23:36] 2025-07-28 05:23:05,250 | INFO     | monitor loop #371: job 0:6746834674 is in state 'finished'
[2025-07-28 07:23:36] 2025-07-28 05:23:05,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 07:23:36] 2025-07-28 05:23:05,448 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 07:23:36] 2025-07-28 05:23:05,449 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3439.6846874999997
[2025-07-28 07:23:36] 2025-07-28 05:23:05,450 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6746834674/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 07:23:36] 2025-07-28 05:23:05,451 | INFO     | extracted standard info from prmon json
[2025-07-28 07:23:36] 2025-07-28 05:23:05,451 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 07:23:36] 2025-07-28 05:23:05,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 07:23:36] 2025-07-28 05:23:05,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 07:23:36] 2025-07-28 05:23:05,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | fitting pss+swap vs Time
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | sum of square deviations: 115715658.0
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | sum of deviations: 1951659803.0
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | mean x: 1753677877.5
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | mean y: 2407619.722222222
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | -- intersect: -29575116114.594776
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | intersect: -29575116114.594776
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | chi2: 0.003203694038030264
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | -- intersect: -29575116114.594776
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | current memory leak: 16.87 B/s (using 72 data points, chi2=0.00)
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | could have reported an average CPU frequency of 3749 MHz (6 samples)
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | ..............................
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | . Timing measurements:
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | . get job = 0 s
[2025-07-28 07:23:36] 2025-07-28 05:23:05,452 | INFO     | . initial setup = 1 s
[2025-07-28 07:23:36] 2025-07-28 05:23:05,453 | INFO     | . payload setup = 5 s
[2025-07-28 07:23:36] 2025-07-28 05:23:05,453 | INFO     | . stage-in = 0 s
[2025-07-28 07:23:36] 2025-07-28 05:23:05,453 | INFO     | . payload execution = 4773 s
[2025-07-28 07:23:36] 2025-07-28 05:23:05,453 | INFO     | . stage-out = 0 s
[2025-07-28 07:23:36] 2025-07-28 05:23:05,453 | INFO     | . log creation = 0 s
[2025-07-28 07:23:36] 2025-07-28 05:23:05,453 | INFO     | ..............................
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | 
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | job summary report
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | --------------------------------------------------
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | PanDA job id: 6746834674
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | task id: 45743349
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | errors: (none)
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | pilot state: finished 
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | transexitcode: 0
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | exeerrorcode: 0
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | exeerrordiag: 
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | exitcode: 0
[2025-07-28 07:23:36] 2025-07-28 05:23:05,527 | INFO     | exitmsg: OK
[2025-07-28 07:23:36] 2025-07-28 05:23:05,528 | INFO     | cpuconsumptiontime: 18084 s
[2025-07-28 07:23:36] 2025-07-28 05:23:05,528 | INFO     | nevents: 400
[2025-07-28 07:23:36] 2025-07-28 05:23:05,528 | INFO     | neventsw: 0
[2025-07-28 07:23:36] 2025-07-28 05:23:05,528 | INFO     | pid: 756742
[2025-07-28 07:23:36] 2025-07-28 05:23:05,528 | INFO     | pgrp: 756742
[2025-07-28 07:23:36] 2025-07-28 05:23:05,528 | INFO     | corecount: 4
[2025-07-28 07:23:36] 2025-07-28 05:23:05,528 | INFO     | event service: False
[2025-07-28 07:23:36] 2025-07-28 05:23:05,528 | INFO     | sizes: {0: 2397422, 4: 2397684, 11: 2397712, 4782: 2424094, 4783: 2433098, 4784: 2433154, 4789: 2433476}
[2025-07-28 07:23:36] 2025-07-28 05:23:05,528 | INFO     | --------------------------------------------------
[2025-07-28 07:23:36] 2025-07-28 05:23:05,528 | INFO     | 
[2025-07-28 07:23:36] 2025-07-28 05:23:05,528 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 07:23:36] 2025-07-28 05:23:05,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | job 6746834674 has completed (purged errors)
[2025-07-28 07:23:36] 2025-07-28 05:23:05,548 | INFO     | overall cleanup function is called
[2025-07-28 07:23:36] 2025-07-28 05:23:06,555 | INFO     | --- collectZombieJob: --- 10, [756742]
[2025-07-28 07:23:36] 2025-07-28 05:23:06,555 | INFO     | zombie collector waiting for pid 756742
[2025-07-28 07:23:36] 2025-07-28 05:23:06,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 07:23:36] 2025-07-28 05:23:06,555 | INFO     | collected zombie processes
[2025-07-28 07:23:36] 2025-07-28 05:23:06,555 | INFO     | will attempt to kill all subprocesses of pid=756742
[2025-07-28 07:23:36] 2025-07-28 05:23:06,600 | INFO     | process IDs to be killed: [756742] (in reverse order)
[2025-07-28 07:23:36] 2025-07-28 05:23:06,634 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 07:23:36] 2025-07-28 05:23:06,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 07:23:36] 2025-07-28 05:23:06,636 | INFO     | did not find any defunct processes belonging to 756742
[2025-07-28 07:23:36] 2025-07-28 05:23:06,637 | INFO     | did not find any defunct processes belonging to 756742
[2025-07-28 07:23:36] 2025-07-28 05:23:06,637 | INFO     | ready for new job
[2025-07-28 07:23:36] 2025-07-28 05:23:06,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 07:23:36] 2025-07-28 05:23:06,638 | INFO     | ***************************************
[2025-07-28 07:23:36] 2025-07-28 05:23:06,638 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 07:23:36] 2025-07-28 05:23:06,638 | INFO     | ***************************************
[2025-07-28 07:23:36] 2025-07-28 05:23:06,638 | INFO     | 
[2025-07-28 07:23:36] 2025-07-28 05:23:06,639 | INFO     | architecture information:
[2025-07-28 07:23:36] 2025-07-28 05:23:06,639 | INFO     | executing command: cat /etc/os-release
[2025-07-28 07:23:36] 2025-07-28 05:23:06,653 | INFO     | cat /etc/os-release:
[2025-07-28 07:23:36] NAME="CentOS Linux"
[2025-07-28 07:23:36] VERSION="7 (Core)"
[2025-07-28 07:23:36] ID="centos"
[2025-07-28 07:23:36] ID_LIKE="rhel fedora"
[2025-07-28 07:23:36] VERSION_ID="7"
[2025-07-28 07:23:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 07:23:36] ANSI_COLOR="0;31"
[2025-07-28 07:23:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 07:23:36] HOME_URL="https://www.centos.org/"
[2025-07-28 07:23:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 07:23:36] 
[2025-07-28 07:23:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 07:23:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 07:23:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 07:23:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 07:23:36] 
[2025-07-28 07:23:36] 2025-07-28 05:23:06,653 | INFO     | ***************************************
[2025-07-28 07:23:36] 2025-07-28 05:23:07,157 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 07:23:36] 2025-07-28 05:23:07,174 | INFO     | sufficient remaining disk space (218980417536 B)
[2025-07-28 07:23:36] 2025-07-28 05:23:07,175 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 07:23:36] 2025-07-28 05:23:07,175 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 07:23:36] 2025-07-28 05:23:07,175 | INFO     | update_server=False
[2025-07-28 07:23:36] 2025-07-28 05:23:07,175 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 07:23:36] 2025-07-28 05:23:07,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 07:23:36] 2025-07-28 05:23:07,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 07:23:36] 2025-07-28 05:23:07,175 | INFO     | aborting loop
[2025-07-28 07:23:36] 2025-07-28 05:23:07,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 07:23:36] 2025-07-28 05:23:07,472 | INFO     | all data control threads have been joined
[2025-07-28 07:23:36] 2025-07-28 05:23:07,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 07:23:36] 2025-07-28 05:23:08,181 | INFO     | [job] retrieve thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:08,181 | INFO     | [job] queue monitor thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:08,181 | INFO     | [job] job monitor thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:08,194 | INFO     | [payload] validate_post thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:08,205 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:08,310 | INFO     | [payload] failed_post thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:08,314 | INFO     | all job control threads have been joined
[2025-07-28 07:23:36] 2025-07-28 05:23:08,342 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:08,478 | INFO     | [data] control thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:08,542 | INFO     | all payload control threads have been joined
[2025-07-28 07:23:36] 2025-07-28 05:23:08,873 | INFO     | [data] copytool_in thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:09,144 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:09,320 | INFO     | [job] control thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:09,485 | INFO     | [job] validate thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:09,548 | INFO     | [payload] control thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:09,761 | INFO     | [data] copytool_out thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:11,183 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:17,802 | INFO     | job.realtimelogging is not enabled
[2025-07-28 07:23:36] 2025-07-28 05:23:18,803 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 07:23:36] 2025-07-28 05:23:19,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140633725060928)>', '<ExcThread(monitor, started 140632823670528)>']
[2025-07-28 07:23:36] 2025-07-28 05:23:24,906 | INFO     | all workflow threads have been joined
[2025-07-28 07:23:36] 2025-07-28 05:23:24,906 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 07:23:36] 2025-07-28 05:23:24,906 | INFO     | traces error code: 0
[2025-07-28 07:23:36] 2025-07-28 05:23:24,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 07:23:36] 2025-07-28 05:23:36,704 | INFO     | PID=750127 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 07:23:36] 2025-07-28 05:23:36,705 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 07:23:36] 2025-07-28 05:23:36,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 07:23:36] 2025-07-28 05:23:36,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 07:23:36] 2025-07-28 05:23:36,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 07:23:36] 2025-07-28 05:23:36,705 | INFO     | [monitor] control thread has ended
[2025-07-28 07:23:36] 2025-07-28 05:23:36,782 [wrapper] ==== pilot stdout END ====
[2025-07-28 07:23:36] 2025-07-28 05:23:36,786 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 07:23:36] 2025-07-28 05:23:36,790 [wrapper] pilotpid: 750127
[2025-07-28 07:23:36] 2025-07-28 05:23:36,794 [wrapper] Pilot exit status: 0
[2025-07-28 07:23:36] 2025-07-28 05:23:36,806 [wrapper] pandaids: 6746834674
[2025-07-28 07:23:36] 2025-07-28 05:23:36,828 [wrapper] cleanup supervisor_pilot  768918 750128
[2025-07-28 07:23:36] 2025-07-28 05:23:36,832 [wrapper] Test setup, not cleaning
[2025-07-28 07:23:36] 2025-07-28 05:23:36,836 [wrapper] apfmon messages muted
[2025-07-28 07:23:36] 2025-07-28 05:23:36,840 [wrapper] ==== wrapper stdout END ====
[2025-07-28 07:23:36] 2025-07-28 05:23:36,844 [wrapper] ==== wrapper stderr END ====
[2025-07-28 07:23:36]  *** Error codes and diagnostics ***
[2025-07-28 07:23:36]     "exeErrorCode": 0,
[2025-07-28 07:23:36]     "exeErrorDiag": "",
[2025-07-28 07:23:36]     "pilotErrorCode": 0,
[2025-07-28 07:23:36]     "pilotErrorDiag": "",
[2025-07-28 07:23:36]  *** Listing of results directory ***
[2025-07-28 07:23:36] total 348436
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc    530466 Jul 27 11:06 pilot3.tar.gz
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc      5112 Jul 27 11:35 queuedata.json
[2025-07-28 07:23:36] -rwx------ 1 boinc boinc     36292 Jul 27 11:35 runpilot2-wrapper.sh
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc       100 Jul 28 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 07:23:36] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 06:02 run_atlas
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc       105 Jul 28 06:02 job.xml
[2025-07-28 07:23:36] -rw-r--r-- 2 boinc boinc 143970151 Jul 28 06:02 EVNT.45743347._000456.pool.root.1
[2025-07-28 07:23:36] drwxrwx--x 2 boinc boinc      4096 Jul 28 06:02 shared
[2025-07-28 07:23:36] -rw-r--r-- 2 boinc boinc    542890 Jul 28 06:02 input.tar.gz
[2025-07-28 07:23:36] -rw-r--r-- 2 boinc boinc     15095 Jul 28 06:02 start_atlas.sh
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc         0 Jul 28 06:02 boinc_setup_complete
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc      6380 Jul 28 06:02 init_data.xml
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc         0 Jul 28 06:02 boinc_lockfile
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc      2560 Jul 28 06:02 pandaJob.out
[2025-07-28 07:23:36] -rw------- 1 boinc boinc    980117 Jul 28 06:03 agis_schedconf.cvmfs.json
[2025-07-28 07:23:36] -rw------- 1 boinc boinc   1593052 Jul 28 06:03 agis_ddmendpoints.agis.ALL.json
[2025-07-28 07:23:36] drwx------ 4 boinc boinc      4096 Jul 28 06:03 pilot3
[2025-07-28 07:23:36] -rw------- 1 boinc boinc 207528677 Jul 28 07:22 HITS.45743349._046420.pool.root.1
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc       529 Jul 28 07:22 boinc_task_state.xml
[2025-07-28 07:23:36] -rw------- 1 boinc boinc      1036 Jul 28 07:22 memory_monitor_summary.json
[2025-07-28 07:23:36] -rw------- 1 boinc boinc    242237 Jul 28 07:22 log.45743349._046420.job.log.tgz.1
[2025-07-28 07:23:36] -rw------- 1 boinc boinc      7762 Jul 28 07:23 heartbeat.json
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc      8192 Jul 28 07:23 boinc_mmap_file
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc        27 Jul 28 07:23 wrapper_checkpoint.txt
[2025-07-28 07:23:36] -rw------- 1 boinc boinc       746 Jul 28 07:23 pilotlog.txt
[2025-07-28 07:23:36] -rw------- 1 boinc boinc        95 Jul 28 07:23 pilot_heartbeat.json
[2025-07-28 07:23:36] -rw------- 1 boinc boinc    468671 Jul 28 07:23 log.45743349._046420.job.log.1
[2025-07-28 07:23:36] -rw------- 1 boinc boinc       357 Jul 28 07:23 output.list
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc       620 Jul 28 07:23 runtime_log
[2025-07-28 07:23:36] -rw------- 1 boinc boinc    727040 Jul 28 07:23 result.tar.gz
[2025-07-28 07:23:36] -rw------- 1 boinc boinc       659 Jul 28 07:23 v9LODmKyC07n9Rq4apOajLDm4fhM0noT9bVof3QYDmWK2KDmHYa8Fm.diag
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc      8739 Jul 28 07:23 runtime_log.err
[2025-07-28 07:23:36] -rw-r--r-- 1 boinc boinc     21746 Jul 28 07:23 stderr.txt
[2025-07-28 07:23:36] HITS file was successfully produced:
[2025-07-28 07:23:36] -rw------- 1 boinc boinc 207528677 Jul 28 07:22 shared/HITS.pool.root.1
[2025-07-28 07:23:36]  *** Contents of shared directory: ***
[2025-07-28 07:23:36] total 344532
[2025-07-28 07:23:36] -rw-r--r-- 2 boinc boinc 143970151 Jul 28 06:02 ATLAS.root_0
[2025-07-28 07:23:36] -rw-r--r-- 2 boinc boinc    542890 Jul 28 06:02 input.tar.gz
[2025-07-28 07:23:36] -rw-r--r-- 2 boinc boinc     15095 Jul 28 06:02 start_atlas.sh
[2025-07-28 07:23:36] -rw------- 1 boinc boinc 207528677 Jul 28 07:22 HITS.pool.root.1
[2025-07-28 07:23:36] -rw------- 1 boinc boinc    727040 Jul 28 07:23 result.tar.gz
07:23:38 (746414): run_atlas exited; CPU time 18095.141294
07:23:38 (746414): called boinc_finish(0)

</stderr_txt>
]]>

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