Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:02:26 (22864): wrapper (7.7.26015): starting
11:02:26 (22864): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 11:02:26] Arguments: --nthreads 12
[2025-07-27 11:02:26] Threads: 12
[2025-07-27 11:02:26] Checking for CVMFS
[2025-07-27 11:02:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 11:02:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 11:02:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 11:02:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 11:02:27] 2.11.2.0 3081 112109 99864 148815 1 59 14862040 20275200 1 130560 0 38260442 99.970 9636307 10529 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 11:02:27] CVMFS is ok
[2025-07-27 11:02:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 11:02:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 11:02:27] Further information can be found at the LHC@home message board.
[2025-07-27 11:02:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:02:27] Checking for apptainer binary...
[2025-07-27 11:02:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 11:02:27] Running /usr/bin/apptainer --version
[2025-07-27 11:02:27] apptainer version 1.3.2-1.el7
[2025-07-27 11:02:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:02:28] c-205-29.aglt2.org
[2025-07-27 11:02:28] apptainer works
[2025-07-27 11:02:28] Set ATHENA_PROC_NUMBER=12
[2025-07-27 11:02:28] Set ATHENA_CORE_NUMBER=12
[2025-07-27 11:02:28] Starting ATLAS job with PandaID=6746841490
[2025-07-27 11:02:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:26:36]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:26:36]  is_tar=False
[2025-07-27 12:26:36]  lfn=log.45743349._046426.job.log.tgz.1
[2025-07-27 12:26:36]  mtime=0
[2025-07-27 12:26:36]  protocol_id=None
[2025-07-27 12:26:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 12:26:36]  replicas=None
[2025-07-27 12:26:36]  scope=mc23_13p6TeV
[2025-07-27 12:26:36]  status=None
[2025-07-27 12:26:36]  status_code=0
[2025-07-27 12:26:36]  storage_token=
[2025-07-27 12:26:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746841490/log.45743349._046426.job.log.tgz.1
[2025-07-27 12:26:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/00/log.45743349._046426.job.log.tgz.1
[2025-07-27 12:26:36]  workdir=None
[2025-07-27 12:26:36] ]
[2025-07-27 12:26:36] 2025-07-27 16:26:14,684 | INFO     | transferring file log.45743349._046426.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746841490/log.45743349._046426.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 12:26:36] 2025-07-27 16:26:14,684 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746841490/log.45743349._046426.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._046426.job
[2025-07-27 12:26:36] 2025-07-27 16:26:14,705 | INFO     | adding to output.list: log.45743349._046426.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/00/log.45743349._046426.job.log.tg
[2025-07-27 12:26:36] 2025-07-27 16:26:14,706 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 12:26:36] 2025-07-27 16:26:14,707 | INFO     | summary of transferred files:
[2025-07-27 12:26:36] 2025-07-27 16:26:14,707 | INFO     |  -- lfn=log.45743349._046426.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 12:26:36] 2025-07-27 16:26:14,707 | INFO     | stage-out finished correctly
[2025-07-27 12:26:36] 2025-07-27 16:26:14,878 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 12:26:36] 2025-07-27 16:26:14,959 | INFO     | job 6746841490 has state=finished
[2025-07-27 12:26:36] 2025-07-27 16:26:14,960 | INFO     | preparing for final server update for job 6746841490 in state='finished'
[2025-07-27 12:26:36] 2025-07-27 16:26:14,960 | INFO     | this job has now completed (state=finished)
[2025-07-27 12:26:36] 2025-07-27 16:26:14,961 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 12:26:36] 2025-07-27 16:26:14,961 | INFO     | log transfer has been attempted: DONE
[2025-07-27 12:26:36] 2025-07-27 16:26:14,961 | INFO     | job 6746841490 has finished - writing final server update
[2025-07-27 12:26:36] 2025-07-27 16:26:14,961 | INFO     | total number of processed events: 400 (read)
[2025-07-27 12:26:36] 2025-07-27 16:26:14,962 | INFO     | executing command: lscpu
[2025-07-27 12:26:36] 2025-07-27 16:26:14,988 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 12:26:36] 2025-07-27 16:26:16,316 | WARNING  | process 851 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 12:26:36] 2025-07-27 16:26:16,316 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746841490/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:26:36] 2025-07-27 16:26:16,404 | INFO     | number of running child processes to parent process 851: 1
[2025-07-27 12:26:36] 2025-07-27 16:26:16,405 | INFO     | maximum number of monitored processes: 6
[2025-07-27 12:26:36] 2025-07-27 16:26:17,047 | INFO     | PID=26744 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 12:26:36] 2025-07-27 16:26:18,906 | INFO     | monitor loop #375: job 0:6746841490 is in state 'finished'
[2025-07-27 12:26:36] 2025-07-27 16:26:18,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:26:36] 2025-07-27 16:26:19,858 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 12:26:36] 2025-07-27 16:26:19,861 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-07-27 12:26:36] 2025-07-27 16:26:19,864 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746841490/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:26:36] 2025-07-27 16:26:19,864 | INFO     | extracted standard info from prmon json
[2025-07-27 12:26:36] 2025-07-27 16:26:19,864 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:26:36] 2025-07-27 16:26:19,864 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:26:36] 2025-07-27 16:26:19,865 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:26:36] 2025-07-27 16:26:19,865 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:26:36] 2025-07-27 16:26:19,866 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:26:36] 2025-07-27 16:26:19,867 | INFO     | sum of square deviations: 130793150.0
[2025-07-27 12:26:36] 2025-07-27 16:26:19,867 | INFO     | sum of deviations: -1877721032.000001
[2025-07-27 12:26:36] 2025-07-27 16:26:19,867 | INFO     | mean x: 1753631155.0
[2025-07-27 12:26:36] 2025-07-27 16:26:19,867 | INFO     | mean y: 2698881.053333333
[2025-07-27 12:26:36] 2025-07-27 16:26:19,867 | INFO     | -- intersect: 25178559406.730354
[2025-07-27 12:26:36] 2025-07-27 16:26:19,867 | INFO     | intersect: 25178559406.730354
[2025-07-27 12:26:36] 2025-07-27 16:26:19,868 | INFO     | chi2: 0.05608865244249601
[2025-07-27 12:26:36] 2025-07-27 16:26:19,868 | INFO     | -- intersect: 25178559406.730354
[2025-07-27 12:26:36] 2025-07-27 16:26:19,868 | INFO     | current memory leak: -14.36 B/s (using 75 data points, chi2=0.06)
[2025-07-27 12:26:36] 2025-07-27 16:26:19,868 | INFO     | could have reported an average CPU frequency of 2036 MHz (6 samples)
[2025-07-27 12:26:36] 2025-07-27 16:26:19,868 | INFO     | ..............................
[2025-07-27 12:26:36] 2025-07-27 16:26:19,869 | INFO     | . Timing measurements:
[2025-07-27 12:26:36] 2025-07-27 16:26:19,869 | INFO     | . get job = 0 s
[2025-07-27 12:26:36] 2025-07-27 16:26:19,869 | INFO     | . initial setup = 2 s
[2025-07-27 12:26:36] 2025-07-27 16:26:19,869 | INFO     | . payload setup = 9 s
[2025-07-27 12:26:36] 2025-07-27 16:26:19,869 | INFO     | . stage-in = 0 s
[2025-07-27 12:26:36] 2025-07-27 16:26:19,869 | INFO     | . payload execution = 4982 s
[2025-07-27 12:26:36] 2025-07-27 16:26:19,869 | INFO     | . stage-out = 0 s
[2025-07-27 12:26:36] 2025-07-27 16:26:19,869 | INFO     | . log creation = 0 s
[2025-07-27 12:26:36] 2025-07-27 16:26:19,869 | INFO     | ..............................
[2025-07-27 12:26:36] 2025-07-27 16:26:20,211 | INFO     | 
[2025-07-27 12:26:36] 2025-07-27 16:26:20,211 | INFO     | job summary report
[2025-07-27 12:26:36] 2025-07-27 16:26:20,211 | INFO     | --------------------------------------------------
[2025-07-27 12:26:36] 2025-07-27 16:26:20,212 | INFO     | PanDA job id: 6746841490
[2025-07-27 12:26:36] 2025-07-27 16:26:20,212 | INFO     | task id: 45743349
[2025-07-27 12:26:36] 2025-07-27 16:26:20,212 | INFO     | errors: (none)
[2025-07-27 12:26:36] 2025-07-27 16:26:20,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:26:36] 2025-07-27 16:26:20,212 | INFO     | pilot state: finished 
[2025-07-27 12:26:36] 2025-07-27 16:26:20,212 | INFO     | transexitcode: 0
[2025-07-27 12:26:36] 2025-07-27 16:26:20,212 | INFO     | exeerrorcode: 0
[2025-07-27 12:26:36] 2025-07-27 16:26:20,213 | INFO     | exeerrordiag: 
[2025-07-27 12:26:36] 2025-07-27 16:26:20,213 | INFO     | exitcode: 0
[2025-07-27 12:26:36] 2025-07-27 16:26:20,213 | INFO     | exitmsg: OK
[2025-07-27 12:26:36] 2025-07-27 16:26:20,213 | INFO     | cpuconsumptiontime: 54513 s
[2025-07-27 12:26:36] 2025-07-27 16:26:20,213 | INFO     | nevents: 400
[2025-07-27 12:26:36] 2025-07-27 16:26:20,213 | INFO     | neventsw: 0
[2025-07-27 12:26:36] 2025-07-27 16:26:20,213 | INFO     | pid: 851
[2025-07-27 12:26:36] 2025-07-27 16:26:20,214 | INFO     | pgrp: 851
[2025-07-27 12:26:36] 2025-07-27 16:26:20,214 | INFO     | corecount: 12
[2025-07-27 12:26:36] 2025-07-27 16:26:20,214 | INFO     | event service: False
[2025-07-27 12:26:36] 2025-07-27 16:26:20,214 | INFO     | sizes: {0: 2396585, 1: 2397441, 6: 2397703, 12: 2397731, 4996: 2424029, 4997: 2433211, 5002: 2433349}
[2025-07-27 12:26:36] 2025-07-27 16:26:20,214 | INFO     | --------------------------------------------------
[2025-07-27 12:26:36] 2025-07-27 16:26:20,214 | INFO     | 
[2025-07-27 12:26:36] 2025-07-27 16:26:20,214 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 12:26:36] 2025-07-27 16:26:20,324 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,324 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,324 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,324 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:26:36] 2025-07-27 16:26:20,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:26:36] 2025-07-27 16:26:20,327 | INFO     | job 6746841490 has completed (purged errors)
[2025-07-27 12:26:36] 2025-07-27 16:26:20,327 | INFO     | overall cleanup function is called
[2025-07-27 12:26:36] 2025-07-27 16:26:21,335 | INFO     | --- collectZombieJob: --- 10, [851]
[2025-07-27 12:26:36] 2025-07-27 16:26:21,336 | INFO     | zombie collector waiting for pid 851
[2025-07-27 12:26:36] 2025-07-27 16:26:21,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:26:36] 2025-07-27 16:26:21,336 | INFO     | collected zombie processes
[2025-07-27 12:26:36] 2025-07-27 16:26:21,336 | INFO     | will attempt to kill all subprocesses of pid=851
[2025-07-27 12:26:36] 2025-07-27 16:26:21,425 | INFO     | process IDs to be killed: [851] (in reverse order)
[2025-07-27 12:26:36] 2025-07-27 16:26:21,478 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:26:36] 2025-07-27 16:26:21,478 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:26:36] 2025-07-27 16:26:21,482 | INFO     | did not find any defunct processes belonging to 851
[2025-07-27 12:26:36] 2025-07-27 16:26:21,485 | INFO     | did not find any defunct processes belonging to 851
[2025-07-27 12:26:36] 2025-07-27 16:26:21,485 | INFO     | ready for new job
[2025-07-27 12:26:36] 2025-07-27 16:26:21,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:26:36] 2025-07-27 16:26:21,486 | INFO     | ***************************************
[2025-07-27 12:26:36] 2025-07-27 16:26:21,486 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:26:36] 2025-07-27 16:26:21,486 | INFO     | ***************************************
[2025-07-27 12:26:36] 2025-07-27 16:26:21,486 | INFO     | 
[2025-07-27 12:26:36] 2025-07-27 16:26:21,487 | INFO     | architecture information:
[2025-07-27 12:26:36] 2025-07-27 16:26:21,487 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:26:36] 2025-07-27 16:26:21,501 | INFO     | cat /etc/os-release:
[2025-07-27 12:26:36] NAME="CentOS Linux"
[2025-07-27 12:26:36] VERSION="7 (Core)"
[2025-07-27 12:26:36] ID="centos"
[2025-07-27 12:26:36] ID_LIKE="rhel fedora"
[2025-07-27 12:26:36] VERSION_ID="7"
[2025-07-27 12:26:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:26:36] ANSI_COLOR="0;31"
[2025-07-27 12:26:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:26:36] HOME_URL="https://www.centos.org/"
[2025-07-27 12:26:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:26:36] 
[2025-07-27 12:26:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:26:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:26:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:26:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:26:36] 
[2025-07-27 12:26:36] 2025-07-27 16:26:21,502 | INFO     | ***************************************
[2025-07-27 12:26:36] 2025-07-27 16:26:22,005 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 12:26:36] 2025-07-27 16:26:22,021 | INFO     | sufficient remaining disk space (29340205056 B)
[2025-07-27 12:26:36] 2025-07-27 16:26:22,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:26:36] 2025-07-27 16:26:22,022 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:26:36] 2025-07-27 16:26:22,022 | INFO     | update_server=False
[2025-07-27 12:26:36] 2025-07-27 16:26:22,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:26:36] 2025-07-27 16:26:22,022 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 12:26:36] 2025-07-27 16:26:22,022 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:26:36] 2025-07-27 16:26:22,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:26:36] 2025-07-27 16:26:22,023 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:26:36] 2025-07-27 16:26:22,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:26:36] 2025-07-27 16:26:22,420 | INFO     | aborting loop
[2025-07-27 12:26:36] 2025-07-27 16:26:22,578 | INFO     | all job control threads have been joined
[2025-07-27 12:26:36] 2025-07-27 16:26:22,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:26:36] 2025-07-27 16:26:22,977 | INFO     | all data control threads have been joined
[2025-07-27 12:26:36] 2025-07-27 16:26:23,027 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:23,045 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:23,158 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:23,224 | INFO     | all payload control threads have been joined
[2025-07-27 12:26:36] 2025-07-27 16:26:23,425 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:23,499 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:23,528 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:23,579 | INFO     | [job] control thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:23,637 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:23,863 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:23,978 | INFO     | [data] control thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:24,228 | INFO     | [payload] control thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:24,425 | INFO     | [job] validate thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:24,543 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:24,810 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:24,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:26:36] 2025-07-27 16:26:25,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:26:36] 2025-07-27 16:26:25,968 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:29,472 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:26:36] 2025-07-27 16:26:31,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664767477568)>', '<ExcThread(monitor, started 139663738136320)>']
[2025-07-27 12:26:36] 2025-07-27 16:26:32,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:26:36] 2025-07-27 16:26:32,074 | INFO     | [monitor] control thread has ended
[2025-07-27 12:26:36] 2025-07-27 16:26:36,309 | INFO     | all workflow threads have been joined
[2025-07-27 12:26:36] 2025-07-27 16:26:36,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:26:36] 2025-07-27 16:26:36,313 | INFO     | traces error code: 0
[2025-07-27 12:26:36] 2025-07-27 16:26:36,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:26:36] 2025-07-27 16:26:36,402 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:26:36] 2025-07-27 16:26:36,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:26:36] 2025-07-27 16:26:36,411 [wrapper] pilotpid: 26744
[2025-07-27 12:26:36] 2025-07-27 16:26:36,414 [wrapper] Pilot exit status: 0
[2025-07-27 12:26:36] 2025-07-27 16:26:36,430 [wrapper] pandaids: 6746841490
[2025-07-27 12:26:36] 2025-07-27 16:26:36,468 [wrapper] cleanup supervisor_pilot 26941 26745
[2025-07-27 12:26:36] 2025-07-27 16:26:36,472 [wrapper] Test setup, not cleaning
[2025-07-27 12:26:36] 2025-07-27 16:26:36,475 [wrapper] apfmon messages muted
[2025-07-27 12:26:36] 2025-07-27 16:26:36,479 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:26:36] 2025-07-27 16:26:36,483 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:26:36]  *** Error codes and diagnostics ***
[2025-07-27 12:26:36]     "exeErrorCode": 0,
[2025-07-27 12:26:36]     "exeErrorDiag": "",
[2025-07-27 12:26:36]     "pilotErrorCode": 0,
[2025-07-27 12:26:36]     "pilotErrorDiag": "",
[2025-07-27 12:26:36]  *** Listing of results directory ***
[2025-07-27 12:26:36] total 439552
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 05:06 pilot3.tar.gz
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 05:35 queuedata.json
[2025-07-27 12:26:36] -rwx------ 1 boincer umatlas     36292 Jul 27 05:35 runpilot2-wrapper.sh
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas       100 Jul 27 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:26:36] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 11:02 run_atlas
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas       105 Jul 27 11:02 job.xml
[2025-07-27 12:26:36] -rw-r--r-- 2 boincer umatlas 231696971 Jul 27 11:02 EVNT.45743347._000308.pool.root.1
[2025-07-27 12:26:36] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 11:02 start_atlas.sh
[2025-07-27 12:26:36] drwxrwx--x 2 boincer umatlas      4096 Jul 27 11:02 shared
[2025-07-27 12:26:36] -rw-r--r-- 2 boincer umatlas    542891 Jul 27 11:02 input.tar.gz
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas         0 Jul 27 11:02 boinc_lockfile
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas      2557 Jul 27 11:02 pandaJob.out
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas    980109 Jul 27 11:02 agis_schedconf.cvmfs.json
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas   1593052 Jul 27 11:02 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:26:36] drwx------ 4 boincer umatlas      4096 Jul 27 11:02 pilot3
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 12:19 init_data.xml
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas 212864865 Jul 27 12:25 HITS.45743349._046426.pool.root.1
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas        95 Jul 27 12:25 pilot_heartbeat.json
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas       529 Jul 27 12:25 boinc_task_state.xml
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas      1047 Jul 27 12:26 memory_monitor_summary.json
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas    354181 Jul 27 12:26 log.45743349._046426.job.log.tgz.1
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas      7844 Jul 27 12:26 heartbeat.json
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas        27 Jul 27 12:26 wrapper_checkpoint.txt
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 12:26 boinc_mmap_file
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas      4480 Jul 27 12:26 pilotlog.txt
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas    475212 Jul 27 12:26 log.45743349._046426.job.log.1
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas       357 Jul 27 12:26 output.list
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas       620 Jul 27 12:26 runtime_log
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas    849920 Jul 27 12:26 result.tar.gz
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas       659 Jul 27 12:26 XEMLDmLyC07n9Rq4apOajLDm4fhM0noT9bVof3QYDmcK2KDmvThn7m.diag
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 12:26 runtime_log.err
[2025-07-27 12:26:36] -rw-r--r-- 1 boincer umatlas     21596 Jul 27 12:26 stderr.txt
[2025-07-27 12:26:36] HITS file was successfully produced:
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas 212864865 Jul 27 12:25 shared/HITS.pool.root.1
[2025-07-27 12:26:36]  *** Contents of shared directory: ***
[2025-07-27 12:26:36] total 435528
[2025-07-27 12:26:36] -rw-r--r-- 2 boincer umatlas 231696971 Jul 27 11:02 ATLAS.root_0
[2025-07-27 12:26:36] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 11:02 start_atlas.sh
[2025-07-27 12:26:36] -rw-r--r-- 2 boincer umatlas    542891 Jul 27 11:02 input.tar.gz
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas 212864865 Jul 27 12:25 HITS.pool.root.1
[2025-07-27 12:26:36] -rw------- 1 boincer umatlas    849920 Jul 27 12:26 result.tar.gz
12:26:38 (22864): run_atlas exited; CPU time 54492.949867
12:26:38 (22864): called boinc_finish(0)

</stderr_txt>
]]>

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