Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:00:50 (16168): wrapper (7.7.26015): starting
11:00:50 (16168): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 11:00:50] Arguments: --nthreads 12
[2025-07-27 11:00:50] Threads: 12
[2025-07-27 11:00:50] Checking for CVMFS
[2025-07-27 11:00:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 11:00:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 11:00:51] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 11:00:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 11:00:51] 2.11.2.0 2949 112154 92148 148815 2 59 10696792 20275200 1 130560 0 37946540 99.971 8848140 10054 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 11:00:51] CVMFS is ok
[2025-07-27 11:00:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 11:00:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 11:00:51] Further information can be found at the LHC@home message board.
[2025-07-27 11:00:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:00:51] Checking for apptainer binary...
[2025-07-27 11:00:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 11:00:51] Running /usr/bin/apptainer --version
[2025-07-27 11:00:51] apptainer version 1.3.2-1.el7
[2025-07-27 11:00:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:00:52] c-205-13.aglt2.org
[2025-07-27 11:00:52] apptainer works
[2025-07-27 11:00:52] Set ATHENA_PROC_NUMBER=12
[2025-07-27 11:00:52] Set ATHENA_CORE_NUMBER=12
[2025-07-27 11:00:52] Starting ATLAS job with PandaID=6746781930
[2025-07-27 11:00:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:25:43]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:25:43]  guid=44709bbf-3db8-48bc-b26a-19d447b3ae23
[2025-07-27 12:25:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 12:25:43]  is_altstaged=None
[2025-07-27 12:25:43]  is_tar=False
[2025-07-27 12:25:43]  lfn=log.45759290._000119.job.log.tgz.1
[2025-07-27 12:25:43]  mtime=0
[2025-07-27 12:25:43]  protocol_id=None
[2025-07-27 12:25:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 12:25:43]  replicas=None
[2025-07-27 12:25:43]  scope=mc23_13p6TeV
[2025-07-27 12:25:43]  status=None
[2025-07-27 12:25:43]  status_code=0
[2025-07-27 12:25:43]  storage_token=
[2025-07-27 12:25:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746781930/log.45759290._000119.job.log.tgz.1
[2025-07-27 12:25:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/20/log.45759290._000119.job.log.tgz.1
[2025-07-27 12:25:43]  workdir=None
[2025-07-27 12:25:43] ]
[2025-07-27 12:25:43] 2025-07-27 16:25:05,896 | INFO     | transferring file log.45759290._000119.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746781930/log.45759290._000119.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 12:25:43] 2025-07-27 16:25:05,896 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746781930/log.45759290._000119.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759290._000119.job
[2025-07-27 12:25:43] 2025-07-27 16:25:05,918 | INFO     | adding to output.list: log.45759290._000119.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/20/log.45759290._000119.job.log.tg
[2025-07-27 12:25:43] 2025-07-27 16:25:05,919 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 12:25:43] 2025-07-27 16:25:05,919 | INFO     | summary of transferred files:
[2025-07-27 12:25:43] 2025-07-27 16:25:05,919 | INFO     |  -- lfn=log.45759290._000119.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 12:25:43] 2025-07-27 16:25:05,920 | INFO     | stage-out finished correctly
[2025-07-27 12:25:43] 2025-07-27 16:25:06,006 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 12:25:43] 2025-07-27 16:25:06,091 | INFO     | job 6746781930 has state=finished
[2025-07-27 12:25:43] 2025-07-27 16:25:06,091 | INFO     | preparing for final server update for job 6746781930 in state='finished'
[2025-07-27 12:25:43] 2025-07-27 16:25:06,092 | INFO     | this job has now completed (state=finished)
[2025-07-27 12:25:43] 2025-07-27 16:25:06,092 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 12:25:43] 2025-07-27 16:25:06,092 | INFO     | log transfer has been attempted: DONE
[2025-07-27 12:25:43] 2025-07-27 16:25:06,093 | INFO     | job 6746781930 has finished - writing final server update
[2025-07-27 12:25:43] 2025-07-27 16:25:06,093 | INFO     | total number of processed events: 400 (read)
[2025-07-27 12:25:43] 2025-07-27 16:25:06,094 | INFO     | executing command: lscpu
[2025-07-27 12:25:43] 2025-07-27 16:25:06,119 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 12:25:43] 2025-07-27 16:25:06,556 | INFO     | monitor loop #377: job 0:6746781930 is in state 'finished'
[2025-07-27 12:25:43] 2025-07-27 16:25:06,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:25:43] 2025-07-27 16:25:09,059 | INFO     | monitor loop #378: job 0:6746781930 is in state 'finished'
[2025-07-27 12:25:43] 2025-07-27 16:25:09,059 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:25:43] 2025-07-27 16:25:11,074 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 12:25:43] 2025-07-27 16:25:11,078 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-07-27 12:25:43] 2025-07-27 16:25:11,081 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746781930/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:25:43] 2025-07-27 16:25:11,081 | INFO     | extracted standard info from prmon json
[2025-07-27 12:25:43] 2025-07-27 16:25:11,081 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:25:43] 2025-07-27 16:25:11,081 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:25:43] 2025-07-27 16:25:11,082 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:25:43] 2025-07-27 16:25:11,082 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:25:43] 2025-07-27 16:25:11,084 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:25:43] 2025-07-27 16:25:11,084 | INFO     | sum of square deviations: 136095575.0
[2025-07-27 12:25:43] 2025-07-27 16:25:11,085 | INFO     | sum of deviations: -2668017267.999999
[2025-07-27 12:25:43] 2025-07-27 16:25:11,085 | INFO     | mean x: 1753631088.5
[2025-07-27 12:25:43] 2025-07-27 16:25:11,085 | INFO     | mean y: 2711834.1578947366
[2025-07-27 12:25:43] 2025-07-27 16:25:11,085 | INFO     | -- intersect: 34380890741.29455
[2025-07-27 12:25:43] 2025-07-27 16:25:11,085 | INFO     | intersect: 34380890741.29455
[2025-07-27 12:25:43] 2025-07-27 16:25:11,085 | INFO     | chi2: 0.06135120009431214
[2025-07-27 12:25:43] 2025-07-27 16:25:11,086 | INFO     | -- intersect: 34380890741.29455
[2025-07-27 12:25:43] 2025-07-27 16:25:11,086 | INFO     | current memory leak: -19.60 B/s (using 76 data points, chi2=0.06)
[2025-07-27 12:25:43] 2025-07-27 16:25:11,086 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-07-27 12:25:43] 2025-07-27 16:25:11,086 | INFO     | ..............................
[2025-07-27 12:25:43] 2025-07-27 16:25:11,086 | INFO     | . Timing measurements:
[2025-07-27 12:25:43] 2025-07-27 16:25:11,086 | INFO     | . get job = 0 s
[2025-07-27 12:25:43] 2025-07-27 16:25:11,087 | INFO     | . initial setup = 2 s
[2025-07-27 12:25:43] 2025-07-27 16:25:11,087 | INFO     | . payload setup = 9 s
[2025-07-27 12:25:43] 2025-07-27 16:25:11,087 | INFO     | . stage-in = 0 s
[2025-07-27 12:25:43] 2025-07-27 16:25:11,087 | INFO     | . payload execution = 5009 s
[2025-07-27 12:25:43] 2025-07-27 16:25:11,087 | INFO     | . stage-out = 0 s
[2025-07-27 12:25:43] 2025-07-27 16:25:11,087 | INFO     | . log creation = 0 s
[2025-07-27 12:25:43] 2025-07-27 16:25:11,087 | INFO     | ..............................
[2025-07-27 12:25:43] 2025-07-27 16:25:11,172 | INFO     | 
[2025-07-27 12:25:43] 2025-07-27 16:25:11,172 | INFO     | job summary report
[2025-07-27 12:25:43] 2025-07-27 16:25:11,173 | INFO     | --------------------------------------------------
[2025-07-27 12:25:43] 2025-07-27 16:25:11,173 | INFO     | PanDA job id: 6746781930
[2025-07-27 12:25:43] 2025-07-27 16:25:11,173 | INFO     | task id: 45759290
[2025-07-27 12:25:43] 2025-07-27 16:25:11,173 | INFO     | errors: (none)
[2025-07-27 12:25:43] 2025-07-27 16:25:11,173 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:25:43] 2025-07-27 16:25:11,173 | INFO     | pilot state: finished 
[2025-07-27 12:25:43] 2025-07-27 16:25:11,174 | INFO     | transexitcode: 0
[2025-07-27 12:25:43] 2025-07-27 16:25:11,174 | INFO     | exeerrorcode: 0
[2025-07-27 12:25:43] 2025-07-27 16:25:11,174 | INFO     | exeerrordiag: 
[2025-07-27 12:25:43] 2025-07-27 16:25:11,174 | INFO     | exitcode: 0
[2025-07-27 12:25:43] 2025-07-27 16:25:11,174 | INFO     | exitmsg: OK
[2025-07-27 12:25:43] 2025-07-27 16:25:11,174 | INFO     | cpuconsumptiontime: 54238 s
[2025-07-27 12:25:43] 2025-07-27 16:25:11,174 | INFO     | nevents: 400
[2025-07-27 12:25:43] 2025-07-27 16:25:11,175 | INFO     | neventsw: 0
[2025-07-27 12:25:43] 2025-07-27 16:25:11,175 | INFO     | pid: 27964
[2025-07-27 12:25:43] 2025-07-27 16:25:11,175 | INFO     | pgrp: 27964
[2025-07-27 12:25:43] 2025-07-27 16:25:11,175 | INFO     | corecount: 12
[2025-07-27 12:25:43] 2025-07-27 16:25:11,175 | INFO     | event service: False
[2025-07-27 12:25:43] 2025-07-27 16:25:11,175 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 5022: 2424063, 5023: 2424062, 5024: 2433300, 5029: 2433438}
[2025-07-27 12:25:43] 2025-07-27 16:25:11,176 | INFO     | --------------------------------------------------
[2025-07-27 12:25:43] 2025-07-27 16:25:11,176 | INFO     | 
[2025-07-27 12:25:43] 2025-07-27 16:25:11,176 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 12:25:43] 2025-07-27 16:25:11,200 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,203 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:25:43] 2025-07-27 16:25:11,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,203 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:25:43] 2025-07-27 16:25:11,203 | INFO     | job 6746781930 has completed (purged errors)
[2025-07-27 12:25:43] 2025-07-27 16:25:11,204 | INFO     | overall cleanup function is called
[2025-07-27 12:25:43] 2025-07-27 16:25:12,212 | INFO     | --- collectZombieJob: --- 10, [27964]
[2025-07-27 12:25:43] 2025-07-27 16:25:12,212 | INFO     | zombie collector waiting for pid 27964
[2025-07-27 12:25:43] 2025-07-27 16:25:12,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:25:43] 2025-07-27 16:25:12,213 | INFO     | collected zombie processes
[2025-07-27 12:25:43] 2025-07-27 16:25:12,213 | INFO     | will attempt to kill all subprocesses of pid=27964
[2025-07-27 12:25:43] 2025-07-27 16:25:12,303 | INFO     | process IDs to be killed: [27964] (in reverse order)
[2025-07-27 12:25:43] 2025-07-27 16:25:12,351 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:25:43] 2025-07-27 16:25:12,352 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:25:43] 2025-07-27 16:25:12,355 | INFO     | did not find any defunct processes belonging to 27964
[2025-07-27 12:25:43] 2025-07-27 16:25:12,358 | INFO     | did not find any defunct processes belonging to 27964
[2025-07-27 12:25:43] 2025-07-27 16:25:12,359 | INFO     | ready for new job
[2025-07-27 12:25:43] 2025-07-27 16:25:12,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:25:43] 2025-07-27 16:25:12,360 | INFO     | ***************************************
[2025-07-27 12:25:43] 2025-07-27 16:25:12,360 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:25:43] 2025-07-27 16:25:12,360 | INFO     | ***************************************
[2025-07-27 12:25:43] 2025-07-27 16:25:12,360 | INFO     | 
[2025-07-27 12:25:43] 2025-07-27 16:25:12,361 | INFO     | architecture information:
[2025-07-27 12:25:43] 2025-07-27 16:25:12,361 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:25:43] 2025-07-27 16:25:12,376 | INFO     | cat /etc/os-release:
[2025-07-27 12:25:43] NAME="CentOS Linux"
[2025-07-27 12:25:43] VERSION="7 (Core)"
[2025-07-27 12:25:43] ID="centos"
[2025-07-27 12:25:43] ID_LIKE="rhel fedora"
[2025-07-27 12:25:43] VERSION_ID="7"
[2025-07-27 12:25:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:25:43] ANSI_COLOR="0;31"
[2025-07-27 12:25:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:25:43] HOME_URL="https://www.centos.org/"
[2025-07-27 12:25:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:25:43] 
[2025-07-27 12:25:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:25:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:25:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:25:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:25:43] 
[2025-07-27 12:25:43] 2025-07-27 16:25:12,376 | INFO     | ***************************************
[2025-07-27 12:25:43] 2025-07-27 16:25:12,879 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 12:25:43] 2025-07-27 16:25:12,896 | INFO     | sufficient remaining disk space (29347545088 B)
[2025-07-27 12:25:43] 2025-07-27 16:25:12,896 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:25:43] 2025-07-27 16:25:12,896 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:25:43] 2025-07-27 16:25:12,896 | INFO     | update_server=False
[2025-07-27 12:25:43] 2025-07-27 16:25:12,896 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:25:43] 2025-07-27 16:25:12,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:25:43] 2025-07-27 16:25:12,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:25:43] 2025-07-27 16:25:12,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:25:43] 2025-07-27 16:25:12,898 | INFO     | aborting loop
[2025-07-27 12:25:43] 2025-07-27 16:25:13,431 | INFO     | all data control threads have been joined
[2025-07-27 12:25:43] 2025-07-27 16:25:13,767 | INFO     | all payload control threads have been joined
[2025-07-27 12:25:43] 2025-07-27 16:25:13,831 | INFO     | all job control threads have been joined
[2025-07-27 12:25:43] 2025-07-27 16:25:13,902 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:13,903 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:13,904 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:13,930 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:14,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:25:43] 2025-07-27 16:25:14,122 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:14,345 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:14,409 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:14,436 | INFO     | [data] control thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:14,653 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:14,773 | INFO     | [payload] control thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:14,836 | INFO     | [job] control thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:15,248 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:15,263 | INFO     | [job] validate thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:15,401 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:16,023 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:16,903 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:25:43] 2025-07-27 16:25:17,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820957325120)>', '<ExcThread(monitor, started 139820219221760)>']
[2025-07-27 12:25:43] 2025-07-27 16:25:22,311 | INFO     | all workflow threads have been joined
[2025-07-27 12:25:43] 2025-07-27 16:25:22,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:25:43] 2025-07-27 16:25:22,311 | INFO     | traces error code: 0
[2025-07-27 12:25:43] 2025-07-27 16:25:22,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:25:43] 2025-07-27 16:25:42,968 | INFO     | PID=21450 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 12:25:43] 2025-07-27 16:25:42,968 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:25:43] 2025-07-27 16:25:42,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:25:43] 2025-07-27 16:25:42,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:25:43] 2025-07-27 16:25:42,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:25:43] 2025-07-27 16:25:42,969 | INFO     | [monitor] control thread has ended
[2025-07-27 12:25:43] 2025-07-27 16:25:43,061 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:25:43] 2025-07-27 16:25:43,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:25:43] 2025-07-27 16:25:43,069 [wrapper] pilotpid: 21450
[2025-07-27 12:25:43] 2025-07-27 16:25:43,072 [wrapper] Pilot exit status: 0
[2025-07-27 12:25:43] 2025-07-27 16:25:43,087 [wrapper] pandaids: 6746781930
[2025-07-27 12:25:43] 2025-07-27 16:25:43,131 [wrapper] cleanup supervisor_pilot 17970 21451
[2025-07-27 12:25:43] 2025-07-27 16:25:43,134 [wrapper] Test setup, not cleaning
[2025-07-27 12:25:43] 2025-07-27 16:25:43,138 [wrapper] apfmon messages muted
[2025-07-27 12:25:43] 2025-07-27 16:25:43,142 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:25:43] 2025-07-27 16:25:43,146 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:25:43]  *** Error codes and diagnostics ***
[2025-07-27 12:25:43]     "exeErrorCode": 0,
[2025-07-27 12:25:43]     "exeErrorDiag": "",
[2025-07-27 12:25:43]     "pilotErrorCode": 0,
[2025-07-27 12:25:43]     "pilotErrorDiag": "",
[2025-07-27 12:25:43]  *** Listing of results directory ***
[2025-07-27 12:25:43] total 416748
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 04:38 pilot3.tar.gz
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 05:01 queuedata.json
[2025-07-27 12:25:43] -rwx------ 1 boincer umatlas     36292 Jul 27 05:02 runpilot2-wrapper.sh
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas       100 Jul 27 11:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:25:43] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 11:00 run_atlas
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas       105 Jul 27 11:00 job.xml
[2025-07-27 12:25:43] -rw-r--r-- 2 boincer umatlas 246281525 Jul 27 11:00 EVNT.45759282._000002.pool.root.1
[2025-07-27 12:25:43] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 11:00 start_atlas.sh
[2025-07-27 12:25:43] drwxrwx--x 2 boincer umatlas      4096 Jul 27 11:00 shared
[2025-07-27 12:25:43] -rw-r--r-- 2 boincer umatlas    542886 Jul 27 11:00 input.tar.gz
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas         0 Jul 27 11:00 boinc_lockfile
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas      2566 Jul 27 11:00 pandaJob.out
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas    980109 Jul 27 11:01 agis_schedconf.cvmfs.json
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas   1593052 Jul 27 11:01 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:25:43] drwx------ 4 boincer umatlas      4096 Jul 27 11:01 pilot3
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 12:22 init_data.xml
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas 174887084 Jul 27 12:24 HITS.45759290._000119.pool.root.1
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas      1049 Jul 27 12:25 memory_monitor_summary.json
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas    375094 Jul 27 12:25 log.45759290._000119.job.log.tgz.1
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas       529 Jul 27 12:25 boinc_task_state.xml
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas        95 Jul 27 12:25 pilot_heartbeat.json
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas      7842 Jul 27 12:25 heartbeat.json
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 12:25 boinc_mmap_file
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas        27 Jul 27 12:25 wrapper_checkpoint.txt
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas       745 Jul 27 12:25 pilotlog.txt
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas    478990 Jul 27 12:25 log.45759290._000119.job.log.1
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas       357 Jul 27 12:25 output.list
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas       620 Jul 27 12:25 runtime_log
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas    870400 Jul 27 12:25 result.tar.gz
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas       659 Jul 27 12:25 x1lLDmMSC07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmypULDmJFRLWn.diag
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 12:25 runtime_log.err
[2025-07-27 12:25:43] -rw-r--r-- 1 boincer umatlas     21395 Jul 27 12:25 stderr.txt
[2025-07-27 12:25:43] HITS file was successfully produced:
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas 174887084 Jul 27 12:24 shared/HITS.pool.root.1
[2025-07-27 12:25:43]  *** Contents of shared directory: ***
[2025-07-27 12:25:43] total 412708
[2025-07-27 12:25:43] -rw-r--r-- 2 boincer umatlas 246281525 Jul 27 11:00 ATLAS.root_0
[2025-07-27 12:25:43] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 11:00 start_atlas.sh
[2025-07-27 12:25:43] -rw-r--r-- 2 boincer umatlas    542886 Jul 27 11:00 input.tar.gz
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas 174887084 Jul 27 12:24 HITS.pool.root.1
[2025-07-27 12:25:43] -rw------- 1 boincer umatlas    870400 Jul 27 12:25 result.tar.gz
12:25:44 (16168): run_atlas exited; CPU time 54212.251923
12:25:44 (16168): called boinc_finish(0)

</stderr_txt>
]]>

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