Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:58:07 (3031958): wrapper (7.7.26015): starting
10:58:07 (3031958): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 10:58:07] Arguments: --nthreads 8
[2025-07-27 10:58:07] Threads: 8
[2025-07-27 10:58:07] Checking for CVMFS
[2025-07-27 10:58:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:58:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:58:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:58:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:58:09] 2.13.1.0 5035 2088 161936 148815 2 144 27740577 40960000 12424 16776704 0 7345038 99.644 7523276 26010 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 10:58:09] CVMFS is ok
[2025-07-27 10:58:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 10:58:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 10:58:09] Further information can be found at the LHC@home message board.
[2025-07-27 10:58:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:58:09] Checking for apptainer binary...
[2025-07-27 10:58:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 10:58:09] Running /usr/bin/apptainer --version
[2025-07-27 10:58:09] apptainer version 1.4.1-1.el9
[2025-07-27 10:58:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:58:09] c-206-41.aglt2.org
[2025-07-27 10:58:09] apptainer works
[2025-07-27 10:58:09] Set ATHENA_PROC_NUMBER=8
[2025-07-27 10:58:09] Set ATHENA_CORE_NUMBER=8
[2025-07-27 10:58:09] Starting ATLAS job with PandaID=6746830568
[2025-07-27 10:58:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:10:37]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:10:37] 2025-07-27 17:10:03,137 | INFO     | current chi2=1.3912869512726165 (change=-0.1189684276830544 %)
[2025-07-27 13:10:37] 2025-07-27 17:10:03,137 | INFO     | right removable region: 122
[2025-07-27 13:10:37] 2025-07-27 17:10:03,138 | INFO     | sum of square deviations: 576976068.7967502
[2025-07-27 13:10:37] 2025-07-27 17:10:03,138 | INFO     | sum of deviations: -8883367274.918705
[2025-07-27 13:10:37] 2025-07-27 17:10:03,138 | INFO     | mean x: 1753632418.0406504
[2025-07-27 13:10:37] 2025-07-27 17:10:03,138 | INFO     | mean y: 2570300.9837398375
[2025-07-27 13:10:37] 2025-07-27 17:10:03,138 | INFO     | -- intersect: 27002235758.766438
[2025-07-27 13:10:37] 2025-07-27 17:10:03,138 | INFO     | intersect: 27002235758.766438
[2025-07-27 13:10:37] 2025-07-27 17:10:03,139 | INFO     | chi2: 0.08544606900910165
[2025-07-27 13:10:37] 2025-07-27 17:10:03,139 | INFO     | current chi2=0.08544606900910165 (change=93.85118053643299 %)
[2025-07-27 13:10:37] 2025-07-27 17:10:03,139 | INFO     | sum of square deviations: 509429091.28813607
[2025-07-27 13:10:37] 2025-07-27 17:10:03,139 | INFO     | sum of deviations: -3421547952.2542377
[2025-07-27 13:10:37] 2025-07-27 17:10:03,139 | INFO     | mean x: 1753632570.542373
[2025-07-27 13:10:37] 2025-07-27 17:10:03,139 | INFO     | mean y: 2558025.5508474577
[2025-07-27 13:10:37] 2025-07-27 17:10:03,139 | INFO     | -- intersect: 11780719173.697525
[2025-07-27 13:10:37] 2025-07-27 17:10:03,140 | INFO     | intersect: 11780719173.697525
[2025-07-27 13:10:37] 2025-07-27 17:10:03,140 | INFO     | chi2: 0.03430939895931809
[2025-07-27 13:10:37] 2025-07-27 17:10:03,140 | INFO     | current chi2=0.03430939895931809 (change=59.84672044343727 %)
[2025-07-27 13:10:37] 2025-07-27 17:10:03,140 | INFO     | sum of square deviations: 447377663.85840666
[2025-07-27 13:10:37] 2025-07-27 17:10:03,140 | INFO     | sum of deviations: -186727074.17699084
[2025-07-27 13:10:37] 2025-07-27 17:10:03,140 | INFO     | mean x: 1753632723.0353982
[2025-07-27 13:10:37] 2025-07-27 17:10:03,141 | INFO     | mean y: 2550066.0442477874
[2025-07-27 13:10:37] 2025-07-27 17:10:03,141 | INFO     | -- intersect: 734483584.4263058
[2025-07-27 13:10:37] 2025-07-27 17:10:03,141 | INFO     | intersect: 734483584.4263058
[2025-07-27 13:10:37] 2025-07-27 17:10:03,141 | INFO     | chi2: 0.012550464613789019
[2025-07-27 13:10:37] 2025-07-27 17:10:03,142 | INFO     | current chi2=0.012550464613789019 (change=63.41974795690661 %)
[2025-07-27 13:10:37] 2025-07-27 17:10:03,142 | INFO     | sum of square deviations: 390582514.91666734
[2025-07-27 13:10:37] 2025-07-27 17:10:03,143 | INFO     | sum of deviations: 943698091.3055557
[2025-07-27 13:10:37] 2025-07-27 17:10:03,143 | INFO     | mean x: 1753632875.5277777
[2025-07-27 13:10:37] 2025-07-27 17:10:03,143 | INFO     | mean y: 2547134.064814815
[2025-07-27 13:10:37] 2025-07-27 17:10:03,143 | INFO     | -- intersect: -4234457683.8270407
[2025-07-27 13:10:37] 2025-07-27 17:10:03,143 | INFO     | intersect: -4234457683.8270407
[2025-07-27 13:10:37] 2025-07-27 17:10:03,143 | INFO     | chi2: 0.0005076377517979784
[2025-07-27 13:10:37] 2025-07-27 17:10:03,143 | INFO     | current chi2=0.0005076377517979784 (change=95.95522741651936 %)
[2025-07-27 13:10:37] 2025-07-27 17:10:03,143 | INFO     | sum of square deviations: 338803884.9126208
[2025-07-27 13:10:37] 2025-07-27 17:10:03,144 | INFO     | sum of deviations: 704048657.8932039
[2025-07-27 13:10:37] 2025-07-27 17:10:03,144 | INFO     | mean x: 1753633028.0291262
[2025-07-27 13:10:37] 2025-07-27 17:10:03,144 | INFO     | mean y: 2547840.368932039
[2025-07-27 13:10:37] 2025-07-27 17:10:03,144 | INFO     | -- intersect: -3641575013.0024867
[2025-07-27 13:10:37] 2025-07-27 17:10:03,144 | INFO     | intersect: -3641575013.0024867
[2025-07-27 13:10:37] 2025-07-27 17:10:03,144 | INFO     | chi2: 0.00046220794228968163
[2025-07-27 13:10:37] 2025-07-27 17:10:03,144 | INFO     | current chi2=0.00046220794228968163 (change=8.94925748673952 %)
[2025-07-27 13:10:37] 2025-07-27 17:10:03,144 | INFO     | left removable region: 50
[2025-07-27 13:10:37] 2025-07-27 17:10:03,145 | INFO     | sum of square deviations: 115718343.94444431
[2025-07-27 13:10:37] 2025-07-27 17:10:03,145 | INFO     | sum of deviations: 184071533.3611111
[2025-07-27 13:10:37] 2025-07-27 17:10:03,145 | INFO     | mean x: 1753633607.5277777
[2025-07-27 13:10:37] 2025-07-27 17:10:03,145 | INFO     | mean y: 2549081.0694444445
[2025-07-27 13:10:37] 2025-07-27 17:10:03,145 | INFO     | -- intersect: -2786931100.622288
[2025-07-27 13:10:37] 2025-07-27 17:10:03,145 | INFO     | intersect: -2786931100.622288
[2025-07-27 13:10:37] 2025-07-27 17:10:03,145 | INFO     | chi2: 0.0003533036771955561
[2025-07-27 13:10:37] 2025-07-27 17:10:03,145 | INFO     | -- intersect: -2786931100.622288
[2025-07-27 13:10:37] 2025-07-27 17:10:03,145 | INFO     | current memory leak: 1.59 B/s (using 72 data points, chi2=0.00)
[2025-07-27 13:10:37] 2025-07-27 17:10:03,146 | INFO     | could have reported an average CPU frequency of 3176 MHz (8 samples)
[2025-07-27 13:10:37] 2025-07-27 17:10:03,160 | INFO     | ..............................
[2025-07-27 13:10:37] 2025-07-27 17:10:03,161 | INFO     | . Timing measurements:
[2025-07-27 13:10:37] 2025-07-27 17:10:03,161 | INFO     | . get job = 0 s
[2025-07-27 13:10:37] 2025-07-27 17:10:03,161 | INFO     | . initial setup = 3 s
[2025-07-27 13:10:37] 2025-07-27 17:10:03,161 | INFO     | . payload setup = 22 s
[2025-07-27 13:10:37] 2025-07-27 17:10:03,161 | INFO     | . stage-in = 0 s
[2025-07-27 13:10:37] 2025-07-27 17:10:03,161 | INFO     | . payload execution = 7795 s
[2025-07-27 13:10:37] 2025-07-27 17:10:03,161 | INFO     | . stage-out = 0 s
[2025-07-27 13:10:37] 2025-07-27 17:10:03,161 | INFO     | . log creation = 0 s
[2025-07-27 13:10:37] 2025-07-27 17:10:03,161 | INFO     | ..............................
[2025-07-27 13:10:37] 2025-07-27 17:10:03,342 | INFO     | 
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | job summary report
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | --------------------------------------------------
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | PanDA job id: 6746830568
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | task id: 45758747
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | errors: (none)
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | pilot state: finished 
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | transexitcode: 0
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | exeerrorcode: 0
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | exeerrordiag: 
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | exitcode: 0
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | exitmsg: OK
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | cpuconsumptiontime: 41262 s
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | nevents: 400
[2025-07-27 13:10:37] 2025-07-27 17:10:03,343 | INFO     | neventsw: 0
[2025-07-27 13:10:37] 2025-07-27 17:10:03,344 | INFO     | pid: 3057651
[2025-07-27 13:10:37] 2025-07-27 17:10:03,344 | INFO     | pgrp: 3057651
[2025-07-27 13:10:37] 2025-07-27 17:10:03,344 | INFO     | corecount: 8
[2025-07-27 13:10:37] 2025-07-27 17:10:03,344 | INFO     | event service: False
[2025-07-27 13:10:37] 2025-07-27 17:10:03,344 | INFO     | sizes: {0: 2397473, 11: 2397473, 16: 2397763, 22: 2397791, 7821: 2425553, 7822: 2425552, 7823: 2434734, 7825: 2434790, 7847: 2434984}
[2025-07-27 13:10:37] 2025-07-27 17:10:03,344 | INFO     | --------------------------------------------------
[2025-07-27 13:10:37] 2025-07-27 17:10:03,344 | INFO     | 
[2025-07-27 13:10:37] 2025-07-27 17:10:03,344 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 13:10:37] 2025-07-27 17:10:03,367 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,368 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,368 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:10:37] 2025-07-27 17:10:03,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:10:37] 2025-07-27 17:10:03,369 | INFO     | job 6746830568 has completed (purged errors)
[2025-07-27 13:10:37] 2025-07-27 17:10:03,369 | INFO     | overall cleanup function is called
[2025-07-27 13:10:37] 2025-07-27 17:10:04,243 | INFO     | PID=3040139 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:10:37] 2025-07-27 17:10:04,243 | INFO     | .. there are 12 such processes running
[2025-07-27 13:10:37] 2025-07-27 17:10:04,379 | INFO     | --- collectZombieJob: --- 10, [3057651]
[2025-07-27 13:10:37] 2025-07-27 17:10:04,379 | INFO     | zombie collector waiting for pid 3057651
[2025-07-27 13:10:37] 2025-07-27 17:10:04,379 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:10:37] 2025-07-27 17:10:04,379 | INFO     | collected zombie processes
[2025-07-27 13:10:37] 2025-07-27 17:10:04,379 | INFO     | will attempt to kill all subprocesses of pid=3057651
[2025-07-27 13:10:37] 2025-07-27 17:10:04,684 | INFO     | process IDs to be killed: [3057651] (in reverse order)
[2025-07-27 13:10:37] 2025-07-27 17:10:05,006 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:10:37] 2025-07-27 17:10:05,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:10:37] 2025-07-27 17:10:05,019 | INFO     | did not find any defunct processes belonging to 3057651
[2025-07-27 13:10:37] 2025-07-27 17:10:05,032 | INFO     | did not find any defunct processes belonging to 3057651
[2025-07-27 13:10:37] 2025-07-27 17:10:05,032 | INFO     | ready for new job
[2025-07-27 13:10:37] 2025-07-27 17:10:05,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:10:37] 2025-07-27 17:10:05,034 | INFO     | ***************************************
[2025-07-27 13:10:37] 2025-07-27 17:10:05,034 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:10:37] 2025-07-27 17:10:05,034 | INFO     | ***************************************
[2025-07-27 13:10:37] 2025-07-27 17:10:05,034 | INFO     | 
[2025-07-27 13:10:37] 2025-07-27 17:10:05,037 | INFO     | architecture information:
[2025-07-27 13:10:37] 2025-07-27 17:10:05,038 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:10:37] 2025-07-27 17:10:05,056 | INFO     | cat /etc/os-release:
[2025-07-27 13:10:37] NAME="CentOS Linux"
[2025-07-27 13:10:37] VERSION="7 (Core)"
[2025-07-27 13:10:37] ID="centos"
[2025-07-27 13:10:37] ID_LIKE="rhel fedora"
[2025-07-27 13:10:37] VERSION_ID="7"
[2025-07-27 13:10:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:10:37] ANSI_COLOR="0;31"
[2025-07-27 13:10:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:10:37] HOME_URL="https://www.centos.org/"
[2025-07-27 13:10:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:10:37] 
[2025-07-27 13:10:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:10:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:10:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:10:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:10:37] 
[2025-07-27 13:10:37] 2025-07-27 17:10:05,056 | INFO     | ***************************************
[2025-07-27 13:10:37] 2025-07-27 17:10:05,559 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 13:10:37] 2025-07-27 17:10:05,591 | INFO     | sufficient remaining disk space (85760933888 B)
[2025-07-27 13:10:37] 2025-07-27 17:10:05,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:10:37] 2025-07-27 17:10:05,592 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:10:37] 2025-07-27 17:10:05,592 | INFO     | update_server=False
[2025-07-27 13:10:37] 2025-07-27 17:10:05,592 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:10:37] 2025-07-27 17:10:05,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:10:37] 2025-07-27 17:10:05,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:10:37] 2025-07-27 17:10:05,754 | INFO     | all data control threads have been joined
[2025-07-27 13:10:37] 2025-07-27 17:10:06,176 | INFO     | all job control threads have been joined
[2025-07-27 13:10:37] 2025-07-27 17:10:06,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:10:37] 2025-07-27 17:10:06,530 | INFO     | aborting loop
[2025-07-27 13:10:37] 2025-07-27 17:10:06,559 | INFO     | all payload control threads have been joined
[2025-07-27 13:10:37] 2025-07-27 17:10:06,598 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:06,762 | INFO     | [data] control thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:06,852 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:07,026 | INFO     | [job] validate thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:07,110 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:07,178 | INFO     | [job] control thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:07,402 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:07,486 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:07,536 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:07,562 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:07,565 | INFO     | [payload] control thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:07,588 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:07,599 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:08,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:10:37] 2025-07-27 17:10:09,372 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:09,602 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:16,538 | INFO     | job.realtimelogging is not enabled
[2025-07-27 13:10:37] 2025-07-27 17:10:17,544 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:10:37] 2025-07-27 17:10:18,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627814909760)>', '<ExcThread(monitor, started 139627465778944)>']
[2025-07-27 13:10:37] 2025-07-27 17:10:23,690 | INFO     | all workflow threads have been joined
[2025-07-27 13:10:37] 2025-07-27 17:10:23,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:10:37] 2025-07-27 17:10:23,696 | INFO     | traces error code: 0
[2025-07-27 13:10:37] 2025-07-27 17:10:23,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:10:37] 2025-07-27 17:10:36,705 | INFO     | PID=3040139 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:10:37] 2025-07-27 17:10:36,706 | INFO     | .. there are 12 such processes running
[2025-07-27 13:10:37] 2025-07-27 17:10:36,706 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:10:37] 2025-07-27 17:10:36,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:10:37] 2025-07-27 17:10:36,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:10:37] 2025-07-27 17:10:36,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:10:37] 2025-07-27 17:10:36,706 | INFO     | [monitor] control thread has ended
[2025-07-27 13:10:37] 2025-07-27 17:10:36,865 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:10:37] 2025-07-27 17:10:36,870 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:10:37] 2025-07-27 17:10:36,874 [wrapper] pilotpid: 3040139
[2025-07-27 13:10:37] 2025-07-27 17:10:36,877 [wrapper] Pilot exit status: 0
[2025-07-27 13:10:37] 2025-07-27 17:10:36,890 [wrapper] pandaids: 6746830568
[2025-07-27 13:10:37] 2025-07-27 17:10:36,969 [wrapper] cleanup supervisor_pilot 3721315 3040140
[2025-07-27 13:10:37] 2025-07-27 17:10:36,974 [wrapper] Test setup, not cleaning
[2025-07-27 13:10:37] 2025-07-27 17:10:36,978 [wrapper] apfmon messages muted
[2025-07-27 13:10:37] 2025-07-27 17:10:36,981 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:10:37] 2025-07-27 17:10:36,985 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:10:37]  *** Error codes and diagnostics ***
[2025-07-27 13:10:37]     "exeErrorCode": 0,
[2025-07-27 13:10:37]     "exeErrorDiag": "",
[2025-07-27 13:10:37]     "pilotErrorCode": 0,
[2025-07-27 13:10:37]     "pilotErrorDiag": "",
[2025-07-27 13:10:37]  *** Listing of results directory ***
[2025-07-27 13:10:37] total 417672
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 05:06 pilot3.tar.gz
[2025-07-27 13:10:37] -rwx------. 1 boincer umatlas     36292 Jul 27 05:31 runpilot2-wrapper.sh
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 05:31 queuedata.json
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas       100 Jul 27 10:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:10:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 10:58 run_atlas
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas       105 Jul 27 10:58 job.xml
[2025-07-27 13:10:37] -rw-r--r--. 2 boincer umatlas 241535265 Jul 27 10:58 EVNT.45758745._000002.pool.root.1
[2025-07-27 13:10:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:58 start_atlas.sh
[2025-07-27 13:10:37] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 10:58 shared
[2025-07-27 13:10:37] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 10:58 input.tar.gz
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas         0 Jul 27 10:58 boinc_lockfile
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas      2566 Jul 27 10:58 pandaJob.out
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas    980109 Jul 27 10:58 agis_schedconf.cvmfs.json
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas   1593052 Jul 27 10:58 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:10:37] drwx------. 4 boincer umatlas      4096 Jul 27 10:58 pilot3
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas      6895 Jul 27 13:01 init_data.xml
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas 180155282 Jul 27 13:09 HITS.45758747._000036.pool.root.1
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas       530 Jul 27 13:09 boinc_task_state.xml
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas      1035 Jul 27 13:09 memory_monitor_summary.json
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas    332332 Jul 27 13:09 log.45758747._000036.job.log.tgz.1
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas      7757 Jul 27 13:10 heartbeat.json
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas        95 Jul 27 13:10 pilot_heartbeat.json
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas        27 Jul 27 13:10 wrapper_checkpoint.txt
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 13:10 boinc_mmap_file
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas       823 Jul 27 13:10 pilotlog.txt
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas    730851 Jul 27 13:10 log.45758747._000036.job.log.1
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas       357 Jul 27 13:10 output.list
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas       620 Jul 27 13:10 runtime_log
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas   1085440 Jul 27 13:10 result.tar.gz
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 13:10 runtime_log.err
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas       653 Jul 27 13:10 HatNDmFuC07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5uULDm6wDnJn.diag
[2025-07-27 13:10:37] -rw-r--r--. 1 boincer umatlas     21197 Jul 27 13:10 stderr.txt
[2025-07-27 13:10:37] HITS file was successfully produced:
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas 180155282 Jul 27 13:09 shared/HITS.pool.root.1
[2025-07-27 13:10:37]  *** Contents of shared directory: ***
[2025-07-27 13:10:37] total 413424
[2025-07-27 13:10:37] -rw-r--r--. 2 boincer umatlas 241535265 Jul 27 10:58 ATLAS.root_0
[2025-07-27 13:10:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:58 start_atlas.sh
[2025-07-27 13:10:37] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 10:58 input.tar.gz
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas 180155282 Jul 27 13:09 HITS.pool.root.1
[2025-07-27 13:10:37] -rw-------. 1 boincer umatlas   1085440 Jul 27 13:10 result.tar.gz
13:10:38 (3031958): run_atlas exited; CPU time 41268.064499
13:10:38 (3031958): called boinc_finish(0)

</stderr_txt>
]]>

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