Name 94OKDmr84z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4mTLDm4fj6pm_3
Workunit 233821545
Created 27 Jul 2025, 12:40:01 UTC
Sent 27 Jul 2025, 15:01:38 UTC
Report deadline 4 Aug 2025, 15:01:38 UTC
Received 27 Jul 2025, 16:40:00 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10877978
Run time 1 hours 31 min 12 sec
CPU time 11 hours 26 min 35 sec
Validate state Valid
Credit 204.07
Device peak FLOPS 12.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.64 GB
Peak swap size 3.03 GB
Peak disk usage 631.66 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:01:54 (3452117): wrapper (7.7.26015): starting
11:01:54 (3452117): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 11:01:54] Arguments: --nthreads 8
[2025-07-27 11:01:54] Threads: 8
[2025-07-27 11:01:54] Checking for CVMFS
[2025-07-27 11:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 11:01:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 11:01:54] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 11:01:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 11:01:55] 2.13.1.0 681289 14299 166800 148815 0 460 40192138 40960000 13896 16776704 0 37272904 99.898 19902207 48897 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 11:01:55] CVMFS is ok
[2025-07-27 11:01:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 11:01:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 11:01:55] Further information can be found at the LHC@home message board.
[2025-07-27 11:01:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:01:55] Checking for apptainer binary...
[2025-07-27 11:01:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 11:01:55] Running /usr/bin/apptainer --version
[2025-07-27 11:01:55] apptainer version 1.4.1-1.el9
[2025-07-27 11:01:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:01:55] c-212-14.aglt2.org
[2025-07-27 11:01:55] apptainer works
[2025-07-27 11:01:55] Set ATHENA_PROC_NUMBER=8
[2025-07-27 11:01:55] Set ATHENA_CORE_NUMBER=8
[2025-07-27 11:01:55] Starting ATLAS job with PandaID=6745939224
[2025-07-27 11:01:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:35:04]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:35:04]  mtime=0
[2025-07-27 12:35:04]  protocol_id=None
[2025-07-27 12:35:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 12:35:04]  replicas=None
[2025-07-27 12:35:04]  scope=mc23_13p6TeV
[2025-07-27 12:35:04]  status=None
[2025-07-27 12:35:04]  status_code=0
[2025-07-27 12:35:04]  storage_token=
[2025-07-27 12:35:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745939224/log.45758350._000029.job.log.tgz.1
[2025-07-27 12:35:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/17/log.45758350._000029.job.log.tgz.1
[2025-07-27 12:35:04]  workdir=None
[2025-07-27 12:35:04] ]
[2025-07-27 12:35:04] 2025-07-27 16:34:22,793 | INFO     | transferring file log.45758350._000029.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745939224/log.45758350._000029.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 12:35:04] 2025-07-27 16:34:22,793 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745939224/log.45758350._000029.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758350._000029.job
[2025-07-27 12:35:04] 2025-07-27 16:34:22,818 | INFO     | adding to output.list: log.45758350._000029.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/17/log.45758350._000029.job.log.tg
[2025-07-27 12:35:04] 2025-07-27 16:34:22,819 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 12:35:04] 2025-07-27 16:34:22,820 | INFO     | summary of transferred files:
[2025-07-27 12:35:04] 2025-07-27 16:34:22,820 | INFO     |  -- lfn=log.45758350._000029.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 12:35:04] 2025-07-27 16:34:22,820 | INFO     | stage-out finished correctly
[2025-07-27 12:35:04] 2025-07-27 16:34:23,156 | INFO     | PID=3455814 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 12:35:04] 2025-07-27 16:34:23,157 | INFO     | .. there are 15 such processes running
[2025-07-27 12:35:04] 2025-07-27 16:34:24,244 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 12:35:04] 2025-07-27 16:34:26,230 | INFO     | job 6745939224 has state=finished
[2025-07-27 12:35:04] 2025-07-27 16:34:26,230 | INFO     | preparing for final server update for job 6745939224 in state='finished'
[2025-07-27 12:35:04] 2025-07-27 16:34:26,231 | INFO     | this job has now completed (state=finished)
[2025-07-27 12:35:04] 2025-07-27 16:34:26,231 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 12:35:04] 2025-07-27 16:34:26,231 | INFO     | log transfer has been attempted: DONE
[2025-07-27 12:35:04] 2025-07-27 16:34:26,231 | INFO     | job 6745939224 has finished - writing final server update
[2025-07-27 12:35:04] 2025-07-27 16:34:26,231 | INFO     | total number of processed events: 400 (read)
[2025-07-27 12:35:04] 2025-07-27 16:34:26,232 | INFO     | executing command: lscpu
[2025-07-27 12:35:04] 2025-07-27 16:34:26,293 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 12:35:04] 2025-07-27 16:34:27,634 | WARNING  | process 3462595 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 12:35:04] 2025-07-27 16:34:27,635 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745939224/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:35:04] 2025-07-27 16:34:28,003 | INFO     | number of running child processes to parent process 3462595: 1
[2025-07-27 12:35:04] 2025-07-27 16:34:28,003 | INFO     | maximum number of monitored processes: 6
[2025-07-27 12:35:04] 2025-07-27 16:34:30,507 | INFO     | monitor loop #404: job 0:6745939224 is in state 'finished'
[2025-07-27 12:35:04] 2025-07-27 16:34:30,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:35:04] 2025-07-27 16:34:31,194 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 12:35:04] 2025-07-27 16:34:31,201 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2961.8626874999995
[2025-07-27 12:35:04] 2025-07-27 16:34:31,216 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745939224/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:35:04] 2025-07-27 16:34:31,217 | INFO     | extracted standard info from prmon json
[2025-07-27 12:35:04] 2025-07-27 16:34:31,218 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:35:04] 2025-07-27 16:34:31,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:35:04] 2025-07-27 16:34:31,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:35:04] 2025-07-27 16:34:31,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:35:04] 2025-07-27 16:34:31,220 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:35:04] 2025-07-27 16:34:31,221 | INFO     | sum of square deviations: 183761585.0
[2025-07-27 12:35:04] 2025-07-27 16:34:31,222 | INFO     | sum of deviations: -1965732808.0000002
[2025-07-27 12:35:04] 2025-07-27 16:34:31,222 | INFO     | mean x: 1753631395.5
[2025-07-27 12:35:04] 2025-07-27 16:34:31,222 | INFO     | mean y: 2539543.3095238097
[2025-07-27 12:35:04] 2025-07-27 16:34:31,222 | INFO     | -- intersect: 18761469856.59113
[2025-07-27 12:35:04] 2025-07-27 16:34:31,223 | INFO     | intersect: 18761469856.59113
[2025-07-27 12:35:04] 2025-07-27 16:34:31,224 | INFO     | chi2: 0.02360948891223904
[2025-07-27 12:35:04] 2025-07-27 16:34:31,224 | INFO     | -- intersect: 18761469856.59113
[2025-07-27 12:35:04] 2025-07-27 16:34:31,224 | INFO     | current memory leak: -10.70 B/s (using 84 data points, chi2=0.02)
[2025-07-27 12:35:04] 2025-07-27 16:34:31,224 | INFO     | could have reported an average CPU frequency of 2961 MHz (7 samples)
[2025-07-27 12:35:04] 2025-07-27 16:34:31,224 | INFO     | ..............................
[2025-07-27 12:35:04] 2025-07-27 16:34:31,225 | INFO     | . Timing measurements:
[2025-07-27 12:35:04] 2025-07-27 16:34:31,225 | INFO     | . get job = 0 s
[2025-07-27 12:35:04] 2025-07-27 16:34:31,225 | INFO     | . initial setup = 2 s
[2025-07-27 12:35:04] 2025-07-27 16:34:31,225 | INFO     | . payload setup = 8 s
[2025-07-27 12:35:04] 2025-07-27 16:34:31,225 | INFO     | . stage-in = 0 s
[2025-07-27 12:35:04] 2025-07-27 16:34:31,225 | INFO     | . payload execution = 5504 s
[2025-07-27 12:35:04] 2025-07-27 16:34:31,225 | INFO     | . stage-out = 0 s
[2025-07-27 12:35:04] 2025-07-27 16:34:31,225 | INFO     | . log creation = 0 s
[2025-07-27 12:35:04] 2025-07-27 16:34:31,225 | INFO     | ..............................
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | 
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | job summary report
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | --------------------------------------------------
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | PanDA job id: 6745939224
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | task id: 45758350
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | errors: (none)
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | pilot state: finished 
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | transexitcode: 0
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | exeerrorcode: 0
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | exeerrordiag: 
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | exitcode: 0
[2025-07-27 12:35:04] 2025-07-27 16:34:31,287 | INFO     | exitmsg: OK
[2025-07-27 12:35:04] 2025-07-27 16:34:31,288 | INFO     | cpuconsumptiontime: 40819 s
[2025-07-27 12:35:04] 2025-07-27 16:34:31,288 | INFO     | nevents: 400
[2025-07-27 12:35:04] 2025-07-27 16:34:31,288 | INFO     | neventsw: 0
[2025-07-27 12:35:04] 2025-07-27 16:34:31,288 | INFO     | pid: 3462595
[2025-07-27 12:35:04] 2025-07-27 16:34:31,288 | INFO     | pgrp: 3462595
[2025-07-27 12:35:04] 2025-07-27 16:34:31,288 | INFO     | corecount: 8
[2025-07-27 12:35:04] 2025-07-27 16:34:31,288 | INFO     | event service: False
[2025-07-27 12:35:04] 2025-07-27 16:34:31,288 | INFO     | sizes: {0: 2396656, 1: 2397512, 6: 2397774, 12: 2397802, 5515: 2424253, 5516: 2424252, 5517: 2433434, 5518: 2433490, 5525: 2433684}
[2025-07-27 12:35:04] 2025-07-27 16:34:31,288 | INFO     | --------------------------------------------------
[2025-07-27 12:35:04] 2025-07-27 16:34:31,288 | INFO     | 
[2025-07-27 12:35:04] 2025-07-27 16:34:31,288 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 12:35:04] 2025-07-27 16:34:31,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:35:04] 2025-07-27 16:34:31,309 | INFO     | job 6745939224 has completed (purged errors)
[2025-07-27 12:35:04] 2025-07-27 16:34:31,310 | INFO     | overall cleanup function is called
[2025-07-27 12:35:04] 2025-07-27 16:34:32,315 | INFO     | --- collectZombieJob: --- 10, [3462595]
[2025-07-27 12:35:04] 2025-07-27 16:34:32,315 | INFO     | zombie collector waiting for pid 3462595
[2025-07-27 12:35:04] 2025-07-27 16:34:32,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:35:04] 2025-07-27 16:34:32,316 | INFO     | collected zombie processes
[2025-07-27 12:35:04] 2025-07-27 16:34:32,316 | INFO     | will attempt to kill all subprocesses of pid=3462595
[2025-07-27 12:35:04] 2025-07-27 16:34:32,657 | INFO     | process IDs to be killed: [3462595] (in reverse order)
[2025-07-27 12:35:04] 2025-07-27 16:34:32,761 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:35:04] 2025-07-27 16:34:32,762 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:35:04] 2025-07-27 16:34:32,774 | INFO     | did not find any defunct processes belonging to 3462595
[2025-07-27 12:35:04] 2025-07-27 16:34:32,783 | INFO     | did not find any defunct processes belonging to 3462595
[2025-07-27 12:35:04] 2025-07-27 16:34:32,784 | INFO     | ready for new job
[2025-07-27 12:35:04] 2025-07-27 16:34:32,784 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:35:04] 2025-07-27 16:34:32,785 | INFO     | ***************************************
[2025-07-27 12:35:04] 2025-07-27 16:34:32,785 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:35:04] 2025-07-27 16:34:32,785 | INFO     | ***************************************
[2025-07-27 12:35:04] 2025-07-27 16:34:32,785 | INFO     | 
[2025-07-27 12:35:04] 2025-07-27 16:34:32,790 | INFO     | architecture information:
[2025-07-27 12:35:04] 2025-07-27 16:34:32,790 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:35:04] 2025-07-27 16:34:32,807 | INFO     | cat /etc/os-release:
[2025-07-27 12:35:04] NAME="CentOS Linux"
[2025-07-27 12:35:04] VERSION="7 (Core)"
[2025-07-27 12:35:04] ID="centos"
[2025-07-27 12:35:04] ID_LIKE="rhel fedora"
[2025-07-27 12:35:04] VERSION_ID="7"
[2025-07-27 12:35:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:35:04] ANSI_COLOR="0;31"
[2025-07-27 12:35:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:35:04] HOME_URL="https://www.centos.org/"
[2025-07-27 12:35:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:35:04] 
[2025-07-27 12:35:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:35:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:35:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:35:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:35:04] 
[2025-07-27 12:35:04] 2025-07-27 16:34:32,807 | INFO     | ***************************************
[2025-07-27 12:35:04] 2025-07-27 16:34:33,310 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 12:35:04] 2025-07-27 16:34:33,331 | INFO     | sufficient remaining disk space (129088094208 B)
[2025-07-27 12:35:04] 2025-07-27 16:34:33,332 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:35:04] 2025-07-27 16:34:33,332 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:35:04] 2025-07-27 16:34:33,332 | INFO     | update_server=False
[2025-07-27 12:35:04] 2025-07-27 16:34:33,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:35:04] 2025-07-27 16:34:33,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:35:04] 2025-07-27 16:34:33,658 | INFO     | all data control threads have been joined
[2025-07-27 12:35:04] 2025-07-27 16:34:34,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:35:04] 2025-07-27 16:34:34,016 | INFO     | aborting loop
[2025-07-27 12:35:04] 2025-07-27 16:34:34,337 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:34,358 | INFO     | all payload control threads have been joined
[2025-07-27 12:35:04] 2025-07-27 16:34:34,379 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:34,455 | INFO     | all job control threads have been joined
[2025-07-27 12:35:04] 2025-07-27 16:34:34,583 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:34,663 | INFO     | [data] control thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:34,702 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:34,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:35:04] 2025-07-27 16:34:35,021 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:35,208 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:35,364 | INFO     | [payload] control thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:35,390 | INFO     | [job] validate thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:35,411 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:35,462 | INFO     | [job] control thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:35,519 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:35,608 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:35,719 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:36,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:35:04] 2025-07-27 16:34:37,302 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:38,827 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:35:04] 2025-07-27 16:34:40,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643611711296)>', '<ExcThread(monitor, started 140642965501696)>']
[2025-07-27 12:35:04] 2025-07-27 16:34:45,826 | INFO     | all workflow threads have been joined
[2025-07-27 12:35:04] 2025-07-27 16:34:45,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:35:04] 2025-07-27 16:34:45,827 | INFO     | traces error code: 0
[2025-07-27 12:35:04] 2025-07-27 16:34:45,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:35:04] 2025-07-27 16:35:03,745 | INFO     | PID=3455814 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 12:35:04] 2025-07-27 16:35:03,747 | INFO     | .. there are 15 such processes running
[2025-07-27 12:35:04] 2025-07-27 16:35:03,747 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:35:04] 2025-07-27 16:35:03,748 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:35:04] 2025-07-27 16:35:03,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:35:04] 2025-07-27 16:35:03,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:35:04] 2025-07-27 16:35:03,748 | INFO     | [monitor] control thread has ended
[2025-07-27 12:35:04] 2025-07-27 16:35:03,852 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:35:04] 2025-07-27 16:35:03,854 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:35:04] 2025-07-27 16:35:03,858 [wrapper] pilotpid: 3455814
[2025-07-27 12:35:04] 2025-07-27 16:35:03,863 [wrapper] Pilot exit status: 0
[2025-07-27 12:35:04] 2025-07-27 16:35:03,880 [wrapper] pandaids: 6745939224
[2025-07-27 12:35:04] 2025-07-27 16:35:03,981 [wrapper] cleanup supervisor_pilot 3654424 3455815
[2025-07-27 12:35:04] 2025-07-27 16:35:03,985 [wrapper] Test setup, not cleaning
[2025-07-27 12:35:04] 2025-07-27 16:35:03,988 [wrapper] apfmon messages muted
[2025-07-27 12:35:04] 2025-07-27 16:35:03,991 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:35:04] 2025-07-27 16:35:03,995 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:35:04]  *** Error codes and diagnostics ***
[2025-07-27 12:35:04]     "exeErrorCode": 0,
[2025-07-27 12:35:04]     "exeErrorDiag": "",
[2025-07-27 12:35:04]     "pilotErrorCode": 0,
[2025-07-27 12:35:04]     "pilotErrorDiag": "",
[2025-07-27 12:35:04]  *** Listing of results directory ***
[2025-07-27 12:35:04] total 411636
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 21:08 pilot3.tar.gz
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:13 queuedata.json
[2025-07-27 12:35:04] -rwx------. 1 boincer umatlas     36292 Jul 26 21:14 runpilot2-wrapper.sh
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas       100 Jul 27 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:35:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 11:01 run_atlas
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas       105 Jul 27 11:01 job.xml
[2025-07-27 12:35:04] -rw-r--r--. 2 boincer umatlas 242115241 Jul 27 11:01 EVNT.45758348._000002.pool.root.1
[2025-07-27 12:35:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 11:01 start_atlas.sh
[2025-07-27 12:35:04] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 11:01 shared
[2025-07-27 12:35:04] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 11:01 input.tar.gz
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas         0 Jul 27 11:01 boinc_lockfile
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas      2577 Jul 27 11:01 pandaJob.out
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas    980109 Jul 27 11:02 agis_schedconf.cvmfs.json
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas   1593052 Jul 27 11:02 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:35:04] drwx------. 4 boincer umatlas      4096 Jul 27 11:02 pilot3
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 12:27 init_data.xml
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas       529 Jul 27 12:33 boinc_task_state.xml
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas 173847897 Jul 27 12:33 HITS.45758350._000029.pool.root.1
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas      1042 Jul 27 12:34 memory_monitor_summary.json
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas    302034 Jul 27 12:34 log.45758350._000029.job.log.tgz.1
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas        95 Jul 27 12:34 pilot_heartbeat.json
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas      7767 Jul 27 12:34 heartbeat.json
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas        27 Jul 27 12:35 wrapper_checkpoint.txt
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 12:35 boinc_mmap_file
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas       823 Jul 27 12:35 pilotlog.txt
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas    534731 Jul 27 12:35 log.45758350._000029.job.log.1
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas       357 Jul 27 12:35 output.list
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas       620 Jul 27 12:35 runtime_log
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas    860160 Jul 27 12:35 result.tar.gz
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 12:35 runtime_log.err
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas       654 Jul 27 12:35 94OKDmr84z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4mTLDm4fj6pm.diag
[2025-07-27 12:35:04] -rw-r--r--. 1 boincer umatlas     21859 Jul 27 12:35 stderr.txt
[2025-07-27 12:35:04] HITS file was successfully produced:
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas 173847897 Jul 27 12:33 shared/HITS.pool.root.1
[2025-07-27 12:35:04]  *** Contents of shared directory: ***
[2025-07-27 12:35:04] total 407612
[2025-07-27 12:35:04] -rw-r--r--. 2 boincer umatlas 242115241 Jul 27 11:01 ATLAS.root_0
[2025-07-27 12:35:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 11:01 start_atlas.sh
[2025-07-27 12:35:04] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 11:01 input.tar.gz
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas 173847897 Jul 27 12:33 HITS.pool.root.1
[2025-07-27 12:35:04] -rw-------. 1 boincer umatlas    860160 Jul 27 12:35 result.tar.gz
12:35:06 (3452117): run_atlas exited; CPU time 40977.190796
12:35:06 (3452117): called boinc_finish(0)

</stderr_txt>
]]>


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