Name 5PpKDmEqC07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVuULDmLcsram_1
Workunit 233829049
Created 27 Jul 2025, 12:17:37 UTC
Sent 27 Jul 2025, 14:44:43 UTC
Report deadline 4 Aug 2025, 14:44:43 UTC
Received 27 Jul 2025, 17:46:54 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10856793
Run time 2 hours 50 min 22 sec
CPU time 16 hours 40 min 50 sec
Validate state Valid
Credit 294.47
Device peak FLOPS 24.09 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.66 GB
Peak swap size 3.02 GB
Peak disk usage 637.75 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:45:05 (3877530): wrapper (7.7.26015): starting
10:45:05 (3877530): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 10:45:05] Arguments: --nthreads 8
[2025-07-27 10:45:05] Threads: 8
[2025-07-27 10:45:05] Checking for CVMFS
[2025-07-27 10:45:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:45:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:45:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:45:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:45:06] 2.12.6.0 2059728 18500 345492 148815 0 135 27049589 32935937 24073 16776704 0 59822536 99.696 81786893 22278 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 10:45:06] CVMFS is ok
[2025-07-27 10:45:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 10:45:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 10:45:07] Further information can be found at the LHC@home message board.
[2025-07-27 10:45:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:45:07] Checking for apptainer binary...
[2025-07-27 10:45:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 10:45:07] Running /usr/bin/apptainer --version
[2025-07-27 10:45:07] apptainer version 1.4.1-1.el9
[2025-07-27 10:45:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:45:07] c6-12-29-1.aglt2.org
[2025-07-27 10:45:07] apptainer works
[2025-07-27 10:45:07] Set ATHENA_PROC_NUMBER=8
[2025-07-27 10:45:07] Set ATHENA_CORE_NUMBER=8
[2025-07-27 10:45:07] Starting ATLAS job with PandaID=6746830533
[2025-07-27 10:45:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:37:06]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:37:06] 2025-07-27 17:36:31,320 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:37:06] 2025-07-27 17:36:33,199 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 13:37:06] 2025-07-27 17:36:33,218 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2435.470156249999
[2025-07-27 13:37:06] 2025-07-27 17:36:33,238 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6746830533/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:37:06] 2025-07-27 17:36:33,239 | INFO     | extracted standard info from prmon json
[2025-07-27 13:37:06] 2025-07-27 17:36:33,239 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:37:06] 2025-07-27 17:36:33,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:37:06] 2025-07-27 17:36:33,240 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:37:06] 2025-07-27 17:36:33,240 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:37:06] 2025-07-27 17:36:33,244 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:37:06] 2025-07-27 17:36:33,245 | INFO     | sum of square deviations: 1444163066.550893
[2025-07-27 13:37:06] 2025-07-27 17:36:33,246 | INFO     | sum of deviations: 2881865496.431135
[2025-07-27 13:37:06] 2025-07-27 17:36:33,247 | INFO     | mean x: 1753632660.1437125
[2025-07-27 13:37:06] 2025-07-27 17:36:33,247 | INFO     | mean y: 2183122.982035928
[2025-07-27 13:37:06] 2025-07-27 17:36:33,247 | INFO     | -- intersect: -3497237111.294407
[2025-07-27 13:37:06] 2025-07-27 17:36:33,247 | INFO     | intersect: -3497237111.294407
[2025-07-27 13:37:06] 2025-07-27 17:36:33,247 | INFO     | chi2: 1.945573299667122
[2025-07-27 13:37:06] 2025-07-27 17:36:33,248 | INFO     | sum of square deviations: 1318288315.2345653
[2025-07-27 13:37:06] 2025-07-27 17:36:33,249 | INFO     | sum of deviations: 3176366495.0493827
[2025-07-27 13:37:06] 2025-07-27 17:36:33,249 | INFO     | mean x: 1753632507.6419754
[2025-07-27 13:37:06] 2025-07-27 17:36:33,249 | INFO     | mean y: 2183464.845679012
[2025-07-27 13:37:06] 2025-07-27 17:36:33,250 | INFO     | -- intersect: -4223128614.107467
[2025-07-27 13:37:06] 2025-07-27 17:36:33,250 | INFO     | intersect: -4223128614.107467
[2025-07-27 13:37:06] 2025-07-27 17:36:33,250 | INFO     | chi2: 1.9462647031810716
[2025-07-27 13:37:06] 2025-07-27 17:36:33,250 | INFO     | current chi2=1.9462647031810716 (change=-0.035537263698462565 %)
[2025-07-27 13:37:06] 2025-07-27 17:36:33,250 | INFO     | right removable region: 161
[2025-07-27 13:37:06] 2025-07-27 17:36:33,251 | INFO     | sum of square deviations: 1318283618.9444463
[2025-07-27 13:37:06] 2025-07-27 17:36:33,252 | INFO     | sum of deviations: -19855138533.962963
[2025-07-27 13:37:06] 2025-07-27 17:36:33,252 | INFO     | mean x: 1753632812.648148
[2025-07-27 13:37:06] 2025-07-27 17:36:33,252 | INFO     | mean y: 2210318.7901234566
[2025-07-27 13:37:06] 2025-07-27 17:36:33,252 | INFO     | -- intersect: 26414297924.57519
[2025-07-27 13:37:06] 2025-07-27 17:36:33,252 | INFO     | intersect: 26414297924.57519
[2025-07-27 13:37:06] 2025-07-27 17:36:33,253 | INFO     | chi2: 0.4432559147363918
[2025-07-27 13:37:06] 2025-07-27 17:36:33,253 | INFO     | current chi2=0.4432559147363918 (change=77.21720817137906 %)
[2025-07-27 13:37:06] 2025-07-27 17:36:33,253 | INFO     | sum of square deviations: 1199939196.3312051
[2025-07-27 13:37:06] 2025-07-27 17:36:33,254 | INFO     | sum of deviations: -15728887662.56051
[2025-07-27 13:37:06] 2025-07-27 17:36:33,254 | INFO     | mean x: 1753632965.1528661
[2025-07-27 13:37:06] 2025-07-27 17:36:33,254 | INFO     | mean y: 2204910.3566878983
[2025-07-27 13:37:06] 2025-07-27 17:36:33,254 | INFO     | -- intersect: 22988949567.5743
[2025-07-27 13:37:06] 2025-07-27 17:36:33,254 | INFO     | intersect: 22988949567.5743
[2025-07-27 13:37:06] 2025-07-27 17:36:33,255 | INFO     | chi2: 0.40718602989730623
[2025-07-27 13:37:06] 2025-07-27 17:36:33,255 | INFO     | current chi2=0.40718602989730623 (change=8.137485285568417 %)
[2025-07-27 13:37:06] 2025-07-27 17:36:33,255 | INFO     | left removable region: 20
[2025-07-27 13:37:06] 2025-07-27 17:36:33,255 | INFO     | sum of square deviations: 869190239.8723375
[2025-07-27 13:37:06] 2025-07-27 17:36:33,256 | INFO     | sum of deviations: 263054860.10638344
[2025-07-27 13:37:06] 2025-07-27 17:36:33,256 | INFO     | mean x: 1753633087.1489363
[2025-07-27 13:37:06] 2025-07-27 17:36:33,256 | INFO     | mean y: 2182656.709219858
[2025-07-27 13:37:06] 2025-07-27 17:36:33,257 | INFO     | -- intersect: -528543167.46207154
[2025-07-27 13:37:06] 2025-07-27 17:36:33,257 | INFO     | intersect: -528543167.46207154
[2025-07-27 13:37:06] 2025-07-27 17:36:33,257 | INFO     | chi2: 0.2268689302869936
[2025-07-27 13:37:06] 2025-07-27 17:36:33,257 | INFO     | -- intersect: -528543167.46207154
[2025-07-27 13:37:06] 2025-07-27 17:36:33,257 | INFO     | current memory leak: 0.30 B/s (using 141 data points, chi2=0.23)
[2025-07-27 13:37:06] 2025-07-27 17:36:33,258 | INFO     | could have reported an average CPU frequency of 2461 MHz (9 samples)
[2025-07-27 13:37:06] 2025-07-27 17:36:33,258 | INFO     | ..............................
[2025-07-27 13:37:06] 2025-07-27 17:36:33,258 | INFO     | . Timing measurements:
[2025-07-27 13:37:06] 2025-07-27 17:36:33,258 | INFO     | . get job = 0 s
[2025-07-27 13:37:06] 2025-07-27 17:36:33,258 | INFO     | . initial setup = 3 s
[2025-07-27 13:37:06] 2025-07-27 17:36:33,259 | INFO     | . payload setup = 17 s
[2025-07-27 13:37:06] 2025-07-27 17:36:33,259 | INFO     | . stage-in = 0 s
[2025-07-27 13:37:06] 2025-07-27 17:36:33,259 | INFO     | . payload execution = 10181 s
[2025-07-27 13:37:06] 2025-07-27 17:36:33,259 | INFO     | . stage-out = 1 s
[2025-07-27 13:37:06] 2025-07-27 17:36:33,259 | INFO     | . log creation = 0 s
[2025-07-27 13:37:06] 2025-07-27 17:36:33,259 | INFO     | ..............................
[2025-07-27 13:37:06] 2025-07-27 17:36:33,385 | INFO     | 
[2025-07-27 13:37:06] 2025-07-27 17:36:33,385 | INFO     | job summary report
[2025-07-27 13:37:06] 2025-07-27 17:36:33,385 | INFO     | --------------------------------------------------
[2025-07-27 13:37:06] 2025-07-27 17:36:33,385 | INFO     | PanDA job id: 6746830533
[2025-07-27 13:37:06] 2025-07-27 17:36:33,385 | INFO     | task id: 45758747
[2025-07-27 13:37:06] 2025-07-27 17:36:33,385 | INFO     | errors: (none)
[2025-07-27 13:37:06] 2025-07-27 17:36:33,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:37:06] 2025-07-27 17:36:33,386 | INFO     | pilot state: finished 
[2025-07-27 13:37:06] 2025-07-27 17:36:33,386 | INFO     | transexitcode: 0
[2025-07-27 13:37:06] 2025-07-27 17:36:33,386 | INFO     | exeerrorcode: 0
[2025-07-27 13:37:06] 2025-07-27 17:36:33,386 | INFO     | exeerrordiag: 
[2025-07-27 13:37:06] 2025-07-27 17:36:33,386 | INFO     | exitcode: 0
[2025-07-27 13:37:06] 2025-07-27 17:36:33,386 | INFO     | exitmsg: OK
[2025-07-27 13:37:06] 2025-07-27 17:36:33,386 | INFO     | cpuconsumptiontime: 59074 s
[2025-07-27 13:37:06] 2025-07-27 17:36:33,386 | INFO     | nevents: 400
[2025-07-27 13:37:06] 2025-07-27 17:36:33,386 | INFO     | neventsw: 0
[2025-07-27 13:37:06] 2025-07-27 17:36:33,386 | INFO     | pid: 3891053
[2025-07-27 13:37:06] 2025-07-27 17:36:33,387 | INFO     | pgrp: 3891053
[2025-07-27 13:37:06] 2025-07-27 17:36:33,387 | INFO     | corecount: 8
[2025-07-27 13:37:06] 2025-07-27 17:36:33,387 | INFO     | event service: False
[2025-07-27 13:37:06] 2025-07-27 17:36:33,387 | INFO     | sizes: {0: 2397233, 1: 2397432, 12: 2397432, 13: 2397722, 23: 2397778, 10203: 2426685, 10205: 2435683, 10208: 2435739, 10225: 2435997}
[2025-07-27 13:37:06] 2025-07-27 17:36:33,387 | INFO     | --------------------------------------------------
[2025-07-27 13:37:06] 2025-07-27 17:36:33,387 | INFO     | 
[2025-07-27 13:37:06] 2025-07-27 17:36:33,387 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 13:37:06] 2025-07-27 17:36:33,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:37:06] 2025-07-27 17:36:33,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:37:06] 2025-07-27 17:36:33,417 | INFO     | job 6746830533 has completed (purged errors)
[2025-07-27 13:37:06] 2025-07-27 17:36:33,417 | INFO     | overall cleanup function is called
[2025-07-27 13:37:06] 2025-07-27 17:36:34,426 | INFO     | --- collectZombieJob: --- 10, [3891053]
[2025-07-27 13:37:06] 2025-07-27 17:36:34,427 | INFO     | zombie collector waiting for pid 3891053
[2025-07-27 13:37:06] 2025-07-27 17:36:34,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:37:06] 2025-07-27 17:36:34,427 | INFO     | collected zombie processes
[2025-07-27 13:37:06] 2025-07-27 17:36:34,427 | INFO     | will attempt to kill all subprocesses of pid=3891053
[2025-07-27 13:37:06] 2025-07-27 17:36:35,045 | INFO     | process IDs to be killed: [3891053] (in reverse order)
[2025-07-27 13:37:06] 2025-07-27 17:36:35,223 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:37:06] 2025-07-27 17:36:35,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:37:06] 2025-07-27 17:36:35,247 | INFO     | did not find any defunct processes belonging to 3891053
[2025-07-27 13:37:06] 2025-07-27 17:36:35,269 | INFO     | did not find any defunct processes belonging to 3891053
[2025-07-27 13:37:06] 2025-07-27 17:36:35,270 | INFO     | ready for new job
[2025-07-27 13:37:06] 2025-07-27 17:36:35,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:37:06] 2025-07-27 17:36:35,272 | INFO     | ***************************************
[2025-07-27 13:37:06] 2025-07-27 17:36:35,276 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:37:06] 2025-07-27 17:36:35,276 | INFO     | ***************************************
[2025-07-27 13:37:06] 2025-07-27 17:36:35,276 | INFO     | 
[2025-07-27 13:37:06] 2025-07-27 17:36:35,300 | INFO     | architecture information:
[2025-07-27 13:37:06] 2025-07-27 17:36:35,302 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:37:06] 2025-07-27 17:36:35,334 | INFO     | cat /etc/os-release:
[2025-07-27 13:37:06] NAME="CentOS Linux"
[2025-07-27 13:37:06] VERSION="7 (Core)"
[2025-07-27 13:37:06] ID="centos"
[2025-07-27 13:37:06] ID_LIKE="rhel fedora"
[2025-07-27 13:37:06] VERSION_ID="7"
[2025-07-27 13:37:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:37:06] ANSI_COLOR="0;31"
[2025-07-27 13:37:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:37:06] HOME_URL="https://www.centos.org/"
[2025-07-27 13:37:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:37:06] 
[2025-07-27 13:37:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:37:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:37:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:37:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:37:06] 
[2025-07-27 13:37:06] 2025-07-27 17:36:35,336 | INFO     | ***************************************
[2025-07-27 13:37:06] 2025-07-27 17:36:35,841 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 13:37:06] 2025-07-27 17:36:35,909 | INFO     | sufficient remaining disk space (95505350656 B)
[2025-07-27 13:37:06] 2025-07-27 17:36:35,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:37:06] 2025-07-27 17:36:35,910 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:37:06] 2025-07-27 17:36:35,910 | INFO     | update_server=False
[2025-07-27 13:37:06] 2025-07-27 17:36:35,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:37:06] 2025-07-27 17:36:35,961 | INFO     | all data control threads have been joined
[2025-07-27 13:37:06] 2025-07-27 17:36:36,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:37:06] 2025-07-27 17:36:36,360 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 13:37:06] 2025-07-27 17:36:36,361 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 13:37:06] 2025-07-27 17:36:36,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:37:06] 2025-07-27 17:36:36,361 | INFO     | will abort loop
[2025-07-27 13:37:06] 2025-07-27 17:36:36,784 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:37:06] 2025-07-27 17:36:36,916 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:36,966 | INFO     | [data] control thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:36,975 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:37,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:37,286 | INFO     | all job control threads have been joined
[2025-07-27 13:37:06] 2025-07-27 17:36:37,368 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:37,392 | INFO     | all payload control threads have been joined
[2025-07-27 13:37:06] 2025-07-27 17:36:37,664 | INFO     | [job] validate thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:37,867 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:37,901 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:38,064 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:38,227 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:38,292 | INFO     | [job] control thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:38,399 | INFO     | [payload] control thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:38,400 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:37:06] 2025-07-27 17:36:38,417 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:38,791 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:39,406 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:40,203 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:37:06] 2025-07-27 17:36:41,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482726717248)>', '<ExcThread(monitor, started 140482365597440)>']
[2025-07-27 13:37:06] 2025-07-27 17:36:46,566 | INFO     | all workflow threads have been joined
[2025-07-27 13:37:06] 2025-07-27 17:36:46,567 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:37:06] 2025-07-27 17:36:46,567 | INFO     | traces error code: 0
[2025-07-27 13:37:06] 2025-07-27 17:36:46,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:37:06] 2025-07-27 17:37:05,342 | INFO     | PID=3882438 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:37:06] 2025-07-27 17:37:05,343 | INFO     | .. there are 25 such processes running
[2025-07-27 13:37:06] 2025-07-27 17:37:05,345 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:37:06] 2025-07-27 17:37:05,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:37:06] 2025-07-27 17:37:05,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:37:06] 2025-07-27 17:37:05,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:37:06] 2025-07-27 17:37:05,346 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 13:37:06] 2025-07-27 17:37:05,346 | INFO     | [monitor] control thread has ended
[2025-07-27 13:37:06] 2025-07-27 17:37:05,767 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:37:06] 2025-07-27 17:37:05,782 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:37:06] 2025-07-27 17:37:05,786 [wrapper] pilotpid: 3882438
[2025-07-27 13:37:06] 2025-07-27 17:37:05,790 [wrapper] Pilot exit status: 0
[2025-07-27 13:37:06] 2025-07-27 17:37:05,821 [wrapper] pandaids: 6746830533
[2025-07-27 13:37:06] 2025-07-27 17:37:05,957 [wrapper] cleanup supervisor_pilot  361734 3882439
[2025-07-27 13:37:06] 2025-07-27 17:37:05,964 [wrapper] Test setup, not cleaning
[2025-07-27 13:37:06] 2025-07-27 17:37:05,967 [wrapper] apfmon messages muted
[2025-07-27 13:37:06] 2025-07-27 17:37:05,972 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:37:06] 2025-07-27 17:37:05,975 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:37:06]  *** Error codes and diagnostics ***
[2025-07-27 13:37:06]     "exeErrorCode": 0,
[2025-07-27 13:37:06]     "exeErrorDiag": "",
[2025-07-27 13:37:06]     "pilotErrorCode": 0,
[2025-07-27 13:37:06]     "pilotErrorDiag": "",
[2025-07-27 13:37:06]  *** Listing of results directory ***
[2025-07-27 13:37:06] total 413244
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 05:06 pilot3.tar.gz
[2025-07-27 13:37:06] -rwx------. 1 boincer umatlas     36292 Jul 27 05:27 runpilot2-wrapper.sh
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 05:27 queuedata.json
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas       100 Jul 27 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:37:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 10:45 run_atlas
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas       105 Jul 27 10:45 job.xml
[2025-07-27 13:37:06] -rw-r--r--. 2 boincer umatlas 244446648 Jul 27 10:45 EVNT.45758745._000001.pool.root.1
[2025-07-27 13:37:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:45 start_atlas.sh
[2025-07-27 13:37:06] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 10:45 shared
[2025-07-27 13:37:06] -rw-r--r--. 2 boincer umatlas    542870 Jul 27 10:45 input.tar.gz
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas         0 Jul 27 10:45 boinc_lockfile
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas      2556 Jul 27 10:45 pandaJob.out
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas    980109 Jul 27 10:45 agis_schedconf.cvmfs.json
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas   1593052 Jul 27 10:45 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:37:06] drwx------. 4 boincer umatlas      4096 Jul 27 10:45 pilot3
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas 172399330 Jul 27 13:35 HITS.45758747._000001.pool.root.1
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas       530 Jul 27 13:35 boinc_task_state.xml
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas      1057 Jul 27 13:36 memory_monitor_summary.json
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas    343304 Jul 27 13:36 log.45758747._000001.job.log.tgz.1
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas      6860 Jul 27 13:36 init_data.xml
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas      7812 Jul 27 13:36 heartbeat.json
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 13:36 boinc_mmap_file
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas        28 Jul 27 13:36 wrapper_checkpoint.txt
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas        95 Jul 27 13:37 pilot_heartbeat.json
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas       893 Jul 27 13:37 pilotlog.txt
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas    875889 Jul 27 13:37 log.45758747._000001.job.log.1
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas       357 Jul 27 13:37 output.list
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas       620 Jul 27 13:37 runtime_log
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas   1239040 Jul 27 13:37 result.tar.gz
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas      8671 Jul 27 13:37 runtime_log.err
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas       658 Jul 27 13:37 5PpKDmEqC07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVuULDmLcsram.diag
[2025-07-27 13:37:06] -rw-r--r--. 1 boincer umatlas     21217 Jul 27 13:37 stderr.txt
[2025-07-27 13:37:06] HITS file was successfully produced:
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas 172399330 Jul 27 13:35 shared/HITS.pool.root.1
[2025-07-27 13:37:06]  *** Contents of shared directory: ***
[2025-07-27 13:37:06] total 408848
[2025-07-27 13:37:06] -rw-r--r--. 2 boincer umatlas 244446648 Jul 27 10:45 ATLAS.root_0
[2025-07-27 13:37:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:45 start_atlas.sh
[2025-07-27 13:37:06] -rw-r--r--. 2 boincer umatlas    542870 Jul 27 10:45 input.tar.gz
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas 172399330 Jul 27 13:35 HITS.pool.root.1
[2025-07-27 13:37:06] -rw-------. 1 boincer umatlas   1239040 Jul 27 13:37 result.tar.gz
13:37:08 (3877530): run_atlas exited; CPU time 59547.917314
13:37:08 (3877530): called boinc_finish(0)

</stderr_txt>
]]>


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