Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:08:43 (3179107): wrapper (7.7.26015): starting
12:08:43 (3179107): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 12:08:43] Arguments: --nthreads 12
[2025-07-27 12:08:43] Threads: 12
[2025-07-27 12:08:43] Checking for CVMFS
[2025-07-27 12:08:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:08:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:08:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:08:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:08:44] 2.12.6.0 418423 18585 310404 148817 2 104 22815523 32935937 5877 16776704 0 32914117 99.649 53709946 33391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 12:08:44] CVMFS is ok
[2025-07-27 12:08:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:08:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:08:44] Further information can be found at the LHC@home message board.
[2025-07-27 12:08:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:08:44] Checking for apptainer binary...
[2025-07-27 12:08:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:08:44] Running /usr/bin/apptainer --version
[2025-07-27 12:08:44] apptainer version 1.4.1-1.el9
[2025-07-27 12:08:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:08:44] c6-1-26-2.aglt2.org
[2025-07-27 12:08:44] apptainer works
[2025-07-27 12:08:44] Set ATHENA_PROC_NUMBER=12
[2025-07-27 12:08:44] Set ATHENA_CORE_NUMBER=12
[2025-07-27 12:08:44] Starting ATLAS job with PandaID=6746303098
[2025-07-27 12:08:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:25:20]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:25:20]  replicas=None
[2025-07-27 13:25:20]  scope=mc23_13p6TeV
[2025-07-27 13:25:20]  status=None
[2025-07-27 13:25:20]  status_code=0
[2025-07-27 13:25:20]  storage_token=
[2025-07-27 13:25:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746303098/log.45743349._045694.job.log.tgz.1
[2025-07-27 13:25:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/13/log.45743349._045694.job.log.tgz.1
[2025-07-27 13:25:20]  workdir=None
[2025-07-27 13:25:20] ]
[2025-07-27 13:25:20] 2025-07-27 17:24:39,562 | INFO     | transferring file log.45743349._045694.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746303098/log.45743349._045694.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 13:25:20] 2025-07-27 17:24:39,563 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746303098/log.45743349._045694.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._045694.job
[2025-07-27 13:25:20] 2025-07-27 17:24:39,587 | INFO     | adding to output.list: log.45743349._045694.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/13/log.45743349._045694.job.log.tg
[2025-07-27 13:25:20] 2025-07-27 17:24:39,588 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 13:25:20] 2025-07-27 17:24:39,588 | INFO     | summary of transferred files:
[2025-07-27 13:25:20] 2025-07-27 17:24:39,588 | INFO     |  -- lfn=log.45743349._045694.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 13:25:20] 2025-07-27 17:24:39,590 | INFO     | stage-out finished correctly
[2025-07-27 13:25:20] 2025-07-27 17:24:41,318 | INFO     | monitor loop #338: job 0:6746303098 is in state 'finished'
[2025-07-27 13:25:20] 2025-07-27 17:24:41,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:25:20] 2025-07-27 17:24:41,533 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 13:25:20] 2025-07-27 17:24:41,631 | INFO     | job 6746303098 has state=finished
[2025-07-27 13:25:20] 2025-07-27 17:24:41,632 | INFO     | preparing for final server update for job 6746303098 in state='finished'
[2025-07-27 13:25:20] 2025-07-27 17:24:41,692 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 13:25:20] 2025-07-27 17:24:41,692 | INFO     | this job has now completed (state=finished)
[2025-07-27 13:25:20] 2025-07-27 17:24:41,692 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 13:25:20] 2025-07-27 17:24:41,693 | INFO     | log transfer has been attempted: DONE
[2025-07-27 13:25:20] 2025-07-27 17:24:41,693 | INFO     | job 6746303098 has finished - writing final server update
[2025-07-27 13:25:20] 2025-07-27 17:24:41,693 | INFO     | total number of processed events: 400 (read)
[2025-07-27 13:25:20] 2025-07-27 17:24:41,694 | INFO     | executing command: lscpu
[2025-07-27 13:25:20] 2025-07-27 17:24:41,757 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 13:25:20] 2025-07-27 17:24:41,764 | INFO     | 4549s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 13:25:20] 2025-07-27 17:24:43,126 | INFO     | PID=3182912 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 13:25:20] 2025-07-27 17:24:43,126 | INFO     | .. there are 10 such processes running
[2025-07-27 13:25:20] 2025-07-27 17:24:43,823 | INFO     | monitor loop #339: job 0:6746303098 is in state 'finished'
[2025-07-27 13:25:20] 2025-07-27 17:24:43,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:25:20] 2025-07-27 17:24:46,326 | INFO     | monitor loop #340: job 0:6746303098 is in state 'finished'
[2025-07-27 13:25:20] 2025-07-27 17:24:46,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:25:20] 2025-07-27 17:24:46,783 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 13:25:20] 2025-07-27 17:24:46,787 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2636.8362678571434
[2025-07-27 13:25:20] 2025-07-27 17:24:46,796 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746303098/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:25:20] 2025-07-27 17:24:46,797 | INFO     | extracted standard info from prmon json
[2025-07-27 13:25:20] 2025-07-27 17:24:46,798 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:25:20] 2025-07-27 17:24:46,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:25:20] 2025-07-27 17:24:46,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:25:20] 2025-07-27 17:24:46,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:25:20] 2025-07-27 17:24:46,800 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:25:20] 2025-07-27 17:24:46,800 | INFO     | sum of square deviations: 93240818.0
[2025-07-27 13:25:20] 2025-07-27 17:24:46,800 | INFO     | sum of deviations: 1451032925.0
[2025-07-27 13:25:20] 2025-07-27 17:24:46,801 | INFO     | mean x: 1753634883.0
[2025-07-27 13:25:20] 2025-07-27 17:24:46,801 | INFO     | mean y: 2391795.074626866
[2025-07-27 13:25:20] 2025-07-27 17:24:46,801 | INFO     | -- intersect: -27288037528.073555
[2025-07-27 13:25:20] 2025-07-27 17:24:46,801 | INFO     | intersect: -27288037528.073555
[2025-07-27 13:25:20] 2025-07-27 17:24:46,801 | INFO     | chi2: 0.024210631698146724
[2025-07-27 13:25:20] 2025-07-27 17:24:46,801 | INFO     | -- intersect: -27288037528.073555
[2025-07-27 13:25:20] 2025-07-27 17:24:46,801 | INFO     | current memory leak: 15.56 B/s (using 67 data points, chi2=0.02)
[2025-07-27 13:25:20] 2025-07-27 17:24:46,802 | INFO     | could have reported an average CPU frequency of 2646 MHz (6 samples)
[2025-07-27 13:25:20] 2025-07-27 17:24:46,802 | INFO     | ..............................
[2025-07-27 13:25:20] 2025-07-27 17:24:46,802 | INFO     | . Timing measurements:
[2025-07-27 13:25:20] 2025-07-27 17:24:46,802 | INFO     | . get job = 0 s
[2025-07-27 13:25:20] 2025-07-27 17:24:46,802 | INFO     | . initial setup = 6 s
[2025-07-27 13:25:20] 2025-07-27 17:24:46,802 | INFO     | . payload setup = 6 s
[2025-07-27 13:25:20] 2025-07-27 17:24:46,802 | INFO     | . stage-in = 0 s
[2025-07-27 13:25:20] 2025-07-27 17:24:46,803 | INFO     | . payload execution = 4513 s
[2025-07-27 13:25:20] 2025-07-27 17:24:46,803 | INFO     | . stage-out = 0 s
[2025-07-27 13:25:20] 2025-07-27 17:24:46,803 | INFO     | . log creation = 0 s
[2025-07-27 13:25:20] 2025-07-27 17:24:46,803 | INFO     | ..............................
[2025-07-27 13:25:20] 2025-07-27 17:24:47,151 | INFO     | 
[2025-07-27 13:25:20] 2025-07-27 17:24:47,151 | INFO     | job summary report
[2025-07-27 13:25:20] 2025-07-27 17:24:47,151 | INFO     | --------------------------------------------------
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | PanDA job id: 6746303098
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | task id: 45743349
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | errors: (none)
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | pilot state: finished 
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | transexitcode: 0
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | exeerrorcode: 0
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | exeerrordiag: 
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | exitcode: 0
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | exitmsg: OK
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | cpuconsumptiontime: 48607 s
[2025-07-27 13:25:20] 2025-07-27 17:24:47,152 | INFO     | nevents: 400
[2025-07-27 13:25:20] 2025-07-27 17:24:47,153 | INFO     | neventsw: 0
[2025-07-27 13:25:20] 2025-07-27 17:24:47,153 | INFO     | pid: 3190423
[2025-07-27 13:25:20] 2025-07-27 17:24:47,153 | INFO     | pgrp: 3190423
[2025-07-27 13:25:20] 2025-07-27 17:24:47,153 | INFO     | corecount: 12
[2025-07-27 13:25:20] 2025-07-27 17:24:47,153 | INFO     | event service: False
[2025-07-27 13:25:20] 2025-07-27 17:24:47,153 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 4524: 2423984, 4526: 2432982, 4528: 2433038, 4533: 2433360}
[2025-07-27 13:25:20] 2025-07-27 17:24:47,153 | INFO     | --------------------------------------------------
[2025-07-27 13:25:20] 2025-07-27 17:24:47,153 | INFO     | 
[2025-07-27 13:25:20] 2025-07-27 17:24:47,153 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 13:25:20] 2025-07-27 17:24:47,176 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,176 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,178 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:25:20] 2025-07-27 17:24:47,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,178 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:25:20] 2025-07-27 17:24:47,178 | INFO     | job 6746303098 has completed (purged errors)
[2025-07-27 13:25:20] 2025-07-27 17:24:47,178 | INFO     | overall cleanup function is called
[2025-07-27 13:25:20] 2025-07-27 17:24:48,186 | INFO     | --- collectZombieJob: --- 10, [3190423]
[2025-07-27 13:25:20] 2025-07-27 17:24:48,186 | INFO     | zombie collector waiting for pid 3190423
[2025-07-27 13:25:20] 2025-07-27 17:24:48,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:25:20] 2025-07-27 17:24:48,187 | INFO     | collected zombie processes
[2025-07-27 13:25:20] 2025-07-27 17:24:48,187 | INFO     | will attempt to kill all subprocesses of pid=3190423
[2025-07-27 13:25:20] 2025-07-27 17:24:48,575 | INFO     | process IDs to be killed: [3190423] (in reverse order)
[2025-07-27 13:25:20] 2025-07-27 17:24:48,669 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:25:20] 2025-07-27 17:24:48,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:25:20] 2025-07-27 17:24:48,682 | INFO     | did not find any defunct processes belonging to 3190423
[2025-07-27 13:25:20] 2025-07-27 17:24:48,695 | INFO     | did not find any defunct processes belonging to 3190423
[2025-07-27 13:25:20] 2025-07-27 17:24:48,695 | INFO     | ready for new job
[2025-07-27 13:25:20] 2025-07-27 17:24:48,695 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:25:20] 2025-07-27 17:24:48,697 | INFO     | ***************************************
[2025-07-27 13:25:20] 2025-07-27 17:24:48,697 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:25:20] 2025-07-27 17:24:48,697 | INFO     | ***************************************
[2025-07-27 13:25:20] 2025-07-27 17:24:48,697 | INFO     | 
[2025-07-27 13:25:20] 2025-07-27 17:24:48,712 | INFO     | architecture information:
[2025-07-27 13:25:20] 2025-07-27 17:24:48,712 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:25:20] 2025-07-27 17:24:48,728 | INFO     | cat /etc/os-release:
[2025-07-27 13:25:20] NAME="CentOS Linux"
[2025-07-27 13:25:20] VERSION="7 (Core)"
[2025-07-27 13:25:20] ID="centos"
[2025-07-27 13:25:20] ID_LIKE="rhel fedora"
[2025-07-27 13:25:20] VERSION_ID="7"
[2025-07-27 13:25:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:25:20] ANSI_COLOR="0;31"
[2025-07-27 13:25:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:25:20] HOME_URL="https://www.centos.org/"
[2025-07-27 13:25:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:25:20] 
[2025-07-27 13:25:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:25:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:25:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:25:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:25:20] 
[2025-07-27 13:25:20] 2025-07-27 17:24:48,728 | INFO     | ***************************************
[2025-07-27 13:25:20] 2025-07-27 17:24:49,231 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 13:25:20] 2025-07-27 17:24:49,251 | INFO     | sufficient remaining disk space (76446433280 B)
[2025-07-27 13:25:20] 2025-07-27 17:24:49,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:25:20] 2025-07-27 17:24:49,251 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:25:20] 2025-07-27 17:24:49,251 | INFO     | update_server=False
[2025-07-27 13:25:20] 2025-07-27 17:24:49,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:25:20] 2025-07-27 17:24:49,307 | INFO     | all payload control threads have been joined
[2025-07-27 13:25:20] 2025-07-27 17:24:49,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:25:20] 2025-07-27 17:24:49,835 | INFO     | aborting loop
[2025-07-27 13:25:20] 2025-07-27 17:24:49,965 | INFO     | all job control threads have been joined
[2025-07-27 13:25:20] 2025-07-27 17:24:50,186 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:25:20] 2025-07-27 17:24:50,223 | INFO     | all data control threads have been joined
[2025-07-27 13:25:20] 2025-07-27 17:24:50,257 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:50,313 | INFO     | [payload] control thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:50,425 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:50,712 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:50,840 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:50,970 | INFO     | [job] control thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:51,182 | INFO     | [job] validate thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:51,228 | INFO     | [data] control thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:51,303 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:51,462 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:51,596 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:51,600 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:51,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:25:20] 2025-07-27 17:24:52,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:25:20] 2025-07-27 17:24:52,192 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:52,902 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:56,146 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:24:59,881 | INFO     | job.realtimelogging is not enabled
[2025-07-27 13:25:20] 2025-07-27 17:25:00,888 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:25:20] 2025-07-27 17:25:01,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140271804299072)>', '<ExcThread(monitor, started 140271299827456)>']
[2025-07-27 13:25:20] 2025-07-27 17:25:06,094 | INFO     | all workflow threads have been joined
[2025-07-27 13:25:20] 2025-07-27 17:25:06,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:25:20] 2025-07-27 17:25:06,095 | INFO     | traces error code: 0
[2025-07-27 13:25:20] 2025-07-27 17:25:06,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:25:20] 2025-07-27 17:25:19,635 | INFO     | PID=3182912 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:25:20] 2025-07-27 17:25:19,636 | INFO     | .. there are 11 such processes running
[2025-07-27 13:25:20] 2025-07-27 17:25:19,636 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:25:20] 2025-07-27 17:25:19,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:25:20] 2025-07-27 17:25:19,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:25:20] 2025-07-27 17:25:19,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:25:20] 2025-07-27 17:25:19,636 | INFO     | [monitor] control thread has ended
[2025-07-27 13:25:20] 2025-07-27 17:25:19,833 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:25:20] 2025-07-27 17:25:19,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:25:20] 2025-07-27 17:25:19,839 [wrapper] pilotpid: 3182912
[2025-07-27 13:25:20] 2025-07-27 17:25:19,842 [wrapper] Pilot exit status: 0
[2025-07-27 13:25:20] 2025-07-27 17:25:19,855 [wrapper] pandaids: 6746303098
[2025-07-27 13:25:20] 2025-07-27 17:25:19,935 [wrapper] cleanup supervisor_pilot 3522190 3182913
[2025-07-27 13:25:20] 2025-07-27 17:25:19,939 [wrapper] Test setup, not cleaning
[2025-07-27 13:25:20] 2025-07-27 17:25:19,942 [wrapper] apfmon messages muted
[2025-07-27 13:25:20] 2025-07-27 17:25:19,945 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:25:20] 2025-07-27 17:25:19,949 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:25:20]  *** Error codes and diagnostics ***
[2025-07-27 13:25:20]     "exeErrorCode": 0,
[2025-07-27 13:25:20]     "exeErrorDiag": "",
[2025-07-27 13:25:20]     "pilotErrorCode": 0,
[2025-07-27 13:25:20]     "pilotErrorDiag": "",
[2025-07-27 13:25:20]  *** Listing of results directory ***
[2025-07-27 13:25:20] total 354072
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 02:36 pilot3.tar.gz
[2025-07-27 13:25:20] -rwx------. 1 boincer umatlas     36292 Jul 27 02:37 runpilot2-wrapper.sh
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 02:37 queuedata.json
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas       100 Jul 27 12:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:25:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 12:08 run_atlas
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas       105 Jul 27 12:08 job.xml
[2025-07-27 13:25:20] -rw-r--r--. 2 boincer umatlas 145279653 Jul 27 12:08 EVNT.45743347._002582.pool.root.1
[2025-07-27 13:25:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:08 start_atlas.sh
[2025-07-27 13:25:20] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 12:08 shared
[2025-07-27 13:25:20] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 12:08 input.tar.gz
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas         0 Jul 27 12:08 boinc_lockfile
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 12:08 pandaJob.out
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas    980101 Jul 27 12:08 agis_schedconf.cvmfs.json
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas   1593052 Jul 27 12:08 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:25:20] drwx------. 4 boincer umatlas      4096 Jul 27 12:08 pilot3
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas      6843 Jul 27 13:20 init_data.xml
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas 211782086 Jul 27 13:24 HITS.45743349._045694.pool.root.1
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas       530 Jul 27 13:24 boinc_task_state.xml
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas      1053 Jul 27 13:24 memory_monitor_summary.json
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas        95 Jul 27 13:24 pilot_heartbeat.json
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas    361887 Jul 27 13:24 log.45743349._045694.job.log.tgz.1
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas      7824 Jul 27 13:24 heartbeat.json
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas        27 Jul 27 13:25 wrapper_checkpoint.txt
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 13:25 boinc_mmap_file
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas       823 Jul 27 13:25 pilotlog.txt
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas    454435 Jul 27 13:25 log.45743349._045694.job.log.1
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas       357 Jul 27 13:25 output.list
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas       620 Jul 27 13:25 runtime_log
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas    839680 Jul 27 13:25 result.tar.gz
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas       655 Jul 27 13:25 xFiLDmDCA07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoUULDmIJGxxm.diag
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 13:25 runtime_log.err
[2025-07-27 13:25:20] -rw-r--r--. 1 boincer umatlas     21958 Jul 27 13:25 stderr.txt
[2025-07-27 13:25:20] HITS file was successfully produced:
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas 211782086 Jul 27 13:24 shared/HITS.pool.root.1
[2025-07-27 13:25:20]  *** Contents of shared directory: ***
[2025-07-27 13:25:20] total 350068
[2025-07-27 13:25:20] -rw-r--r--. 2 boincer umatlas 145279653 Jul 27 12:08 ATLAS.root_0
[2025-07-27 13:25:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:08 start_atlas.sh
[2025-07-27 13:25:20] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 12:08 input.tar.gz
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas 211782086 Jul 27 13:24 HITS.pool.root.1
[2025-07-27 13:25:20] -rw-------. 1 boincer umatlas    839680 Jul 27 13:25 result.tar.gz
13:25:21 (3179107): run_atlas exited; CPU time 48676.611846
13:25:21 (3179107): called boinc_finish(0)

</stderr_txt>
]]>

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