Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:08:57 (2335421): wrapper (7.7.26015): starting
08:08:57 (2335421): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 08:08:57] Arguments: --nthreads 12
[2025-07-28 08:08:57] Threads: 12
[2025-07-28 08:08:57] Checking for CVMFS
[2025-07-28 08:08:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 08:08:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 08:08:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 08:08:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 08:08:57] 2.13.1.0 8291 34076 91248 148838 0 57 27967869 46080000 922 130560 0 31797655 99.995 1049660 9137 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-28 08:08:57] CVMFS is ok
[2025-07-28 08:08:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 08:08:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 08:08:57] Further information can be found at the LHC@home message board.
[2025-07-28 08:08:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 08:08:57] Checking for apptainer binary...
[2025-07-28 08:08:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 08:08:57] Running /usr/bin/apptainer --version
[2025-07-28 08:08:57] apptainer version 1.4.1-1.el9
[2025-07-28 08:08:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 08:08:57] gpu01.farm.particle.cz
[2025-07-28 08:08:57] apptainer works
[2025-07-28 08:08:58] Set ATHENA_PROC_NUMBER=12
[2025-07-28 08:08:58] Set ATHENA_CORE_NUMBER=12
[2025-07-28 08:08:58] Starting ATLAS job with PandaID=6746209495
[2025-07-28 08:08:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 09:00:54]  *** The last 200 lines of the pilot log: ***
[2025-07-28 09:00:54]  mtime=0
[2025-07-28 09:00:54]  protocol_id=None
[2025-07-28 09:00:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 09:00:54]  replicas=None
[2025-07-28 09:00:54]  scope=mc23_13p6TeV
[2025-07-28 09:00:54]  status=None
[2025-07-28 09:00:54]  status_code=0
[2025-07-28 09:00:54]  storage_token=
[2025-07-28 09:00:54]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6746209495/log.45759518._000092.job.log.tgz.1
[2025-07-28 09:00:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/af/log.45759518._000092.job.log.tgz.1
[2025-07-28 09:00:54]  workdir=None
[2025-07-28 09:00:54] ]
[2025-07-28 09:00:54] 2025-07-28 07:00:14,225 | INFO     | transferring file log.45759518._000092.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6746209495/log.45759518._000092.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 09:00:54] 2025-07-28 07:00:14,225 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6746209495/log.45759518._000092.job.log.tgz.1 /var/lib/boinc/slots/0/log.45759518._000092.job
[2025-07-28 09:00:54] 2025-07-28 07:00:14,239 | INFO     | adding to output.list: log.45759518._000092.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/af/log.45759518._000092.job.log.tg
[2025-07-28 09:00:54] 2025-07-28 07:00:14,239 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 09:00:54] 2025-07-28 07:00:14,239 | INFO     | summary of transferred files:
[2025-07-28 09:00:54] 2025-07-28 07:00:14,239 | INFO     |  -- lfn=log.45759518._000092.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 09:00:54] 2025-07-28 07:00:14,240 | INFO     | stage-out finished correctly
[2025-07-28 09:00:54] 2025-07-28 07:00:14,881 | INFO     | monitor loop #237: job 0:6746209495 is in state 'finished'
[2025-07-28 09:00:54] 2025-07-28 07:00:14,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 09:00:54] 2025-07-28 07:00:17,384 | INFO     | monitor loop #238: job 0:6746209495 is in state 'finished'
[2025-07-28 09:00:54] 2025-07-28 07:00:17,385 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 09:00:54] 2025-07-28 07:00:17,523 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 09:00:54] 2025-07-28 07:00:18,814 | INFO     | job 6746209495 has state=finished
[2025-07-28 09:00:54] 2025-07-28 07:00:18,815 | INFO     | preparing for final server update for job 6746209495 in state='finished'
[2025-07-28 09:00:54] 2025-07-28 07:00:18,815 | INFO     | this job has now completed (state=finished)
[2025-07-28 09:00:54] 2025-07-28 07:00:18,815 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 09:00:54] 2025-07-28 07:00:18,815 | INFO     | log transfer has been attempted: DONE
[2025-07-28 09:00:54] 2025-07-28 07:00:18,815 | INFO     | job 6746209495 has finished - writing final server update
[2025-07-28 09:00:54] 2025-07-28 07:00:18,816 | INFO     | total number of processed events: 400 (read)
[2025-07-28 09:00:54] 2025-07-28 07:00:18,816 | INFO     | executing command: lscpu
[2025-07-28 09:00:54] 2025-07-28 07:00:18,842 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 09:00:54] 2025-07-28 07:00:19,887 | INFO     | monitor loop #239: job 0:6746209495 is in state 'finished'
[2025-07-28 09:00:54] 2025-07-28 07:00:19,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 09:00:54] 2025-07-28 07:00:21,466 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 09:00:54] 2025-07-28 07:00:21,471 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3221.5333437499994
[2025-07-28 09:00:54] 2025-07-28 07:00:21,477 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6746209495/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 09:00:54] 2025-07-28 07:00:21,477 | INFO     | extracted standard info from prmon json
[2025-07-28 09:00:54] 2025-07-28 07:00:21,477 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 09:00:54] 2025-07-28 07:00:21,478 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 09:00:54] 2025-07-28 07:00:21,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 09:00:54] 2025-07-28 07:00:21,478 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 09:00:54] 2025-07-28 07:00:21,479 | INFO     | fitting pss+swap vs Time
[2025-07-28 09:00:54] 2025-07-28 07:00:21,479 | INFO     | sum of square deviations: 24640462.0
[2025-07-28 09:00:54] 2025-07-28 07:00:21,479 | INFO     | sum of deviations: 506016045.0000001
[2025-07-28 09:00:54] 2025-07-28 07:00:21,479 | INFO     | mean x: 1753684551.0
[2025-07-28 09:00:54] 2025-07-28 07:00:21,480 | INFO     | mean y: 2743233.8139534886
[2025-07-28 09:00:54] 2025-07-28 07:00:21,480 | INFO     | -- intersect: -36010888356.15465
[2025-07-28 09:00:54] 2025-07-28 07:00:21,480 | INFO     | intersect: -36010888356.15465
[2025-07-28 09:00:54] 2025-07-28 07:00:21,480 | INFO     | chi2: 0.0009135648677844925
[2025-07-28 09:00:54] 2025-07-28 07:00:21,480 | INFO     | -- intersect: -36010888356.15465
[2025-07-28 09:00:54] 2025-07-28 07:00:21,480 | INFO     | current memory leak: 20.54 B/s (using 43 data points, chi2=0.00)
[2025-07-28 09:00:54] 2025-07-28 07:00:21,480 | INFO     | could have reported an average CPU frequency of 3223 MHz (5 samples)
[2025-07-28 09:00:54] 2025-07-28 07:00:21,480 | INFO     | ..............................
[2025-07-28 09:00:54] 2025-07-28 07:00:21,480 | INFO     | . Timing measurements:
[2025-07-28 09:00:54] 2025-07-28 07:00:21,481 | INFO     | . get job = 0 s
[2025-07-28 09:00:54] 2025-07-28 07:00:21,481 | INFO     | . initial setup = 1 s
[2025-07-28 09:00:54] 2025-07-28 07:00:21,481 | INFO     | . payload setup = 4 s
[2025-07-28 09:00:54] 2025-07-28 07:00:21,481 | INFO     | . stage-in = 0 s
[2025-07-28 09:00:54] 2025-07-28 07:00:21,481 | INFO     | . payload execution = 3046 s
[2025-07-28 09:00:54] 2025-07-28 07:00:21,481 | INFO     | . stage-out = 0 s
[2025-07-28 09:00:54] 2025-07-28 07:00:21,481 | INFO     | . log creation = 0 s
[2025-07-28 09:00:54] 2025-07-28 07:00:21,481 | INFO     | ..............................
[2025-07-28 09:00:54] 2025-07-28 07:00:21,811 | INFO     | 
[2025-07-28 09:00:54] 2025-07-28 07:00:21,811 | INFO     | job summary report
[2025-07-28 09:00:54] 2025-07-28 07:00:21,811 | INFO     | --------------------------------------------------
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | PanDA job id: 6746209495
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | task id: 45759518
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | errors: (none)
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | pilot state: finished 
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | transexitcode: 0
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | exeerrorcode: 0
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | exeerrordiag: 
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | exitcode: 0
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | exitmsg: OK
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | cpuconsumptiontime: 32934 s
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | nevents: 400
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | neventsw: 0
[2025-07-28 09:00:54] 2025-07-28 07:00:21,812 | INFO     | pid: 2345962
[2025-07-28 09:00:54] 2025-07-28 07:00:21,813 | INFO     | pgrp: 2345962
[2025-07-28 09:00:54] 2025-07-28 07:00:21,813 | INFO     | corecount: 12
[2025-07-28 09:00:54] 2025-07-28 07:00:21,813 | INFO     | event service: False
[2025-07-28 09:00:54] 2025-07-28 07:00:21,813 | INFO     | sizes: {0: 2397412, 3: 2397674, 11: 2397702, 3054: 2423190, 3056: 2432188, 3059: 2432244, 3063: 2432598}
[2025-07-28 09:00:54] 2025-07-28 07:00:21,813 | INFO     | --------------------------------------------------
[2025-07-28 09:00:54] 2025-07-28 07:00:21,813 | INFO     | 
[2025-07-28 09:00:54] 2025-07-28 07:00:21,813 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 09:00:54] 2025-07-28 07:00:21,828 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,828 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,828 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,828 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,829 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 09:00:54] 2025-07-28 07:00:21,830 | INFO     | job 6746209495 has completed (purged errors)
[2025-07-28 09:00:54] 2025-07-28 07:00:21,830 | INFO     | overall cleanup function is called
[2025-07-28 09:00:54] 2025-07-28 07:00:22,836 | INFO     | --- collectZombieJob: --- 10, [2345962]
[2025-07-28 09:00:54] 2025-07-28 07:00:22,837 | INFO     | zombie collector waiting for pid 2345962
[2025-07-28 09:00:54] 2025-07-28 07:00:22,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 09:00:54] 2025-07-28 07:00:22,837 | INFO     | collected zombie processes
[2025-07-28 09:00:54] 2025-07-28 07:00:22,837 | INFO     | will attempt to kill all subprocesses of pid=2345962
[2025-07-28 09:00:54] 2025-07-28 07:00:22,927 | INFO     | process IDs to be killed: [2345962] (in reverse order)
[2025-07-28 09:00:54] 2025-07-28 07:00:22,965 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 09:00:54] 2025-07-28 07:00:22,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 09:00:54] 2025-07-28 07:00:22,969 | INFO     | did not find any defunct processes belonging to 2345962
[2025-07-28 09:00:54] 2025-07-28 07:00:22,972 | INFO     | did not find any defunct processes belonging to 2345962
[2025-07-28 09:00:54] 2025-07-28 07:00:22,972 | INFO     | ready for new job
[2025-07-28 09:00:54] 2025-07-28 07:00:22,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 09:00:54] 2025-07-28 07:00:22,973 | INFO     | ***************************************
[2025-07-28 09:00:54] 2025-07-28 07:00:22,973 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 09:00:54] 2025-07-28 07:00:22,973 | INFO     | ***************************************
[2025-07-28 09:00:54] 2025-07-28 07:00:22,973 | INFO     | 
[2025-07-28 09:00:54] 2025-07-28 07:00:22,974 | INFO     | architecture information:
[2025-07-28 09:00:54] 2025-07-28 07:00:22,974 | INFO     | executing command: cat /etc/os-release
[2025-07-28 09:00:54] 2025-07-28 07:00:22,985 | INFO     | cat /etc/os-release:
[2025-07-28 09:00:54] NAME="CentOS Linux"
[2025-07-28 09:00:54] VERSION="7 (Core)"
[2025-07-28 09:00:54] ID="centos"
[2025-07-28 09:00:54] ID_LIKE="rhel fedora"
[2025-07-28 09:00:54] VERSION_ID="7"
[2025-07-28 09:00:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 09:00:54] ANSI_COLOR="0;31"
[2025-07-28 09:00:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 09:00:54] HOME_URL="https://www.centos.org/"
[2025-07-28 09:00:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 09:00:54] 
[2025-07-28 09:00:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 09:00:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 09:00:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 09:00:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 09:00:54] 
[2025-07-28 09:00:54] 2025-07-28 07:00:22,986 | INFO     | ***************************************
[2025-07-28 09:00:54] 2025-07-28 07:00:23,488 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 09:00:54] 2025-07-28 07:00:23,501 | INFO     | sufficient remaining disk space (62817042432 B)
[2025-07-28 09:00:54] 2025-07-28 07:00:23,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 09:00:54] 2025-07-28 07:00:23,501 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 09:00:54] 2025-07-28 07:00:23,501 | INFO     | update_server=False
[2025-07-28 09:00:54] 2025-07-28 07:00:23,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 09:00:54] 2025-07-28 07:00:23,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:00:54] 2025-07-28 07:00:23,502 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:00:54] 2025-07-28 07:00:23,502 | INFO     | aborting loop
[2025-07-28 09:00:54] 2025-07-28 07:00:23,524 | INFO     | all payload control threads have been joined
[2025-07-28 09:00:54] 2025-07-28 07:00:23,570 | INFO     | all job control threads have been joined
[2025-07-28 09:00:54] 2025-07-28 07:00:23,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 09:00:54] 2025-07-28 07:00:24,376 | INFO     | all data control threads have been joined
[2025-07-28 09:00:54] 2025-07-28 07:00:24,506 | INFO     | [job] job monitor thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:24,507 | INFO     | [job] retrieve thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:24,508 | INFO     | [job] queue monitor thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:24,520 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:24,530 | INFO     | [payload] control thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:24,575 | INFO     | [job] control thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:24,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 09:00:54] 2025-07-28 07:00:25,017 | INFO     | [payload] validate_post thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:25,320 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:25,382 | INFO     | [data] control thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:25,912 | INFO     | [job] validate thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:25,937 | INFO     | [data] copytool_in thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:25,945 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:26,051 | INFO     | [payload] failed_post thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:26,811 | INFO     | [data] copytool_out thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:27,589 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:33,990 | INFO     | job.realtimelogging is not enabled
[2025-07-28 09:00:54] 2025-07-28 07:00:34,996 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 09:00:54] 2025-07-28 07:00:35,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153355552576)>', '<ExcThread(monitor, started 140152869467904)>']
[2025-07-28 09:00:54] 2025-07-28 07:00:40,827 | INFO     | all workflow threads have been joined
[2025-07-28 09:00:54] 2025-07-28 07:00:40,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 09:00:54] 2025-07-28 07:00:40,827 | INFO     | traces error code: 0
[2025-07-28 09:00:54] 2025-07-28 07:00:40,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 09:00:54] 2025-07-28 07:00:54,650 | INFO     | PID=2339233 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 09:00:54] 2025-07-28 07:00:54,651 | INFO     | .. there are 2 such processes running
[2025-07-28 09:00:54] 2025-07-28 07:00:54,651 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 09:00:54] 2025-07-28 07:00:54,651 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 09:00:54] 2025-07-28 07:00:54,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 09:00:54] 2025-07-28 07:00:54,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 09:00:54] 2025-07-28 07:00:54,651 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 09:00:54] 2025-07-28 07:00:54,651 | INFO     | [monitor] control thread has ended
[2025-07-28 09:00:54] 2025-07-28 07:00:54,719 [wrapper] ==== pilot stdout END ====
[2025-07-28 09:00:54] 2025-07-28 07:00:54,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 09:00:54] 2025-07-28 07:00:54,724 [wrapper] pilotpid: 2339233
[2025-07-28 09:00:54] 2025-07-28 07:00:54,726 [wrapper] Pilot exit status: 0
[2025-07-28 09:00:54] 2025-07-28 07:00:54,733 [wrapper] pandaids: 6746209495
[2025-07-28 09:00:54] 2025-07-28 07:00:54,758 [wrapper] cleanup supervisor_pilot 2399391 2339234
[2025-07-28 09:00:54] 2025-07-28 07:00:54,760 [wrapper] Test setup, not cleaning
[2025-07-28 09:00:54] 2025-07-28 07:00:54,762 [wrapper] apfmon messages muted
[2025-07-28 09:00:54] 2025-07-28 07:00:54,764 [wrapper] ==== wrapper stdout END ====
[2025-07-28 09:00:54] 2025-07-28 07:00:54,766 [wrapper] ==== wrapper stderr END ====
[2025-07-28 09:00:54]  *** Error codes and diagnostics ***
[2025-07-28 09:00:54]     "exeErrorCode": 0,
[2025-07-28 09:00:54]     "exeErrorDiag": "",
[2025-07-28 09:00:54]     "pilotErrorCode": 0,
[2025-07-28 09:00:54]     "pilotErrorDiag": "",
[2025-07-28 09:00:54]  *** Listing of results directory ***
[2025-07-28 09:00:54] total 408952
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc    530466 Jul 27 07:42 pilot3.tar.gz
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc      5112 Jul 27 08:04 queuedata.json
[2025-07-28 09:00:54] -rwx------ 1 boinc boinc     36292 Jul 27 08:04 runpilot2-wrapper.sh
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc       100 Jul 28 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 09:00:54] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 08:08 run_atlas
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc       105 Jul 28 08:08 job.xml
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc      9445 Jul 28 08:08 init_data.xml
[2025-07-28 09:00:54] -rw-r--r-- 2 boinc boinc 241534575 Jul 28 08:08 EVNT.45759511._000004.pool.root.1
[2025-07-28 09:00:54] -rw-r--r-- 2 boinc boinc     15095 Jul 28 08:08 start_atlas.sh
[2025-07-28 09:00:54] drwxrwx--x 2 boinc boinc      4096 Jul 28 08:08 shared
[2025-07-28 09:00:54] -rw-r--r-- 2 boinc boinc    542883 Jul 28 08:08 input.tar.gz
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc         0 Jul 28 08:08 boinc_lockfile
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc      2555 Jul 28 08:08 pandaJob.out
[2025-07-28 09:00:54] -rw------- 1 boinc boinc    980125 Jul 28 08:09 agis_schedconf.cvmfs.json
[2025-07-28 09:00:54] -rw------- 1 boinc boinc   1593052 Jul 28 08:09 agis_ddmendpoints.agis.ALL.json
[2025-07-28 09:00:54] drwx------ 4 boinc boinc      4096 Jul 28 08:09 pilot3
[2025-07-28 09:00:54] -rw------- 1 boinc boinc 171992248 Jul 28 08:59 HITS.45759518._000092.pool.root.1
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc       529 Jul 28 08:59 boinc_task_state.xml
[2025-07-28 09:00:54] -rw------- 1 boinc boinc      1026 Jul 28 09:00 memory_monitor_summary.json
[2025-07-28 09:00:54] -rw------- 1 boinc boinc    352896 Jul 28 09:00 log.45759518._000092.job.log.tgz.1
[2025-07-28 09:00:54] -rw------- 1 boinc boinc      7756 Jul 28 09:00 heartbeat.json
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc      8192 Jul 28 09:00 boinc_mmap_file
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc        27 Jul 28 09:00 wrapper_checkpoint.txt
[2025-07-28 09:00:54] -rw------- 1 boinc boinc        95 Jul 28 09:00 pilot_heartbeat.json
[2025-07-28 09:00:54] -rw------- 1 boinc boinc       892 Jul 28 09:00 pilotlog.txt
[2025-07-28 09:00:54] -rw------- 1 boinc boinc    327029 Jul 28 09:00 log.45759518._000092.job.log.1
[2025-07-28 09:00:54] -rw------- 1 boinc boinc       357 Jul 28 09:00 output.list
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc       620 Jul 28 09:00 runtime_log
[2025-07-28 09:00:54] -rw------- 1 boinc boinc    696320 Jul 28 09:00 result.tar.gz
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc      8697 Jul 28 09:00 runtime_log.err
[2025-07-28 09:00:54] -rw------- 1 boinc boinc       658 Jul 28 09:00 IsoKDmDg9z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmB41KDm9CMx2n.diag
[2025-07-28 09:00:54] -rw-r--r-- 1 boinc boinc     21695 Jul 28 09:00 stderr.txt
[2025-07-28 09:00:54] HITS file was successfully produced:
[2025-07-28 09:00:54] -rw------- 1 boinc boinc 171992248 Jul 28 08:59 shared/HITS.pool.root.1
[2025-07-28 09:00:54]  *** Contents of shared directory: ***
[2025-07-28 09:00:54] total 405076
[2025-07-28 09:00:54] -rw-r--r-- 2 boinc boinc 241534575 Jul 28 08:08 ATLAS.root_0
[2025-07-28 09:00:54] -rw-r--r-- 2 boinc boinc     15095 Jul 28 08:08 start_atlas.sh
[2025-07-28 09:00:54] -rw-r--r-- 2 boinc boinc    542883 Jul 28 08:08 input.tar.gz
[2025-07-28 09:00:54] -rw------- 1 boinc boinc 171992248 Jul 28 08:59 HITS.pool.root.1
[2025-07-28 09:00:54] -rw------- 1 boinc boinc    696320 Jul 28 09:00 result.tar.gz
09:00:56 (2335421): run_atlas exited; CPU time 32958.676365
09:00:56 (2335421): called boinc_finish(0)

</stderr_txt>
]]>

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