Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:20:55 (1151441): wrapper (7.7.26015): starting
10:20:55 (1151441): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 10:20:55] Arguments: --nthreads 8
[2025-07-27 10:20:55] Threads: 8
[2025-07-27 10:20:55] Checking for CVMFS
[2025-07-27 10:20:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:20:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:20:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:20:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:20:58] 2.13.0.0 97685 27347 403504 148815 3 64 23902035 32935937 21018 16776704 0 64421726 99.610 102213565 29567 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 10:20:58] CVMFS is ok
[2025-07-27 10:20:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 10:20:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 10:20:58] Further information can be found at the LHC@home message board.
[2025-07-27 10:20:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:20:58] Checking for apptainer binary...
[2025-07-27 10:20:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 10:20:58] Running /usr/bin/apptainer --version
[2025-07-27 10:20:58] apptainer version 1.4.1-1.el9
[2025-07-27 10:20:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:20:59] c6-4-5-1.aglt2.org
[2025-07-27 10:20:59] apptainer works
[2025-07-27 10:20:59] Set ATHENA_PROC_NUMBER=8
[2025-07-27 10:20:59] Set ATHENA_CORE_NUMBER=8
[2025-07-27 10:21:00] Starting ATLAS job with PandaID=6747410771
[2025-07-27 10:21:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:18:40]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:18:40] 2025-07-27 20:18:00,389 | INFO     | monitor loop #1262: job 0:6747410771 is in state 'finished'
[2025-07-27 16:18:40] 2025-07-27 20:18:00,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:18:40] 2025-07-27 20:18:02,906 | INFO     | monitor loop #1263: job 0:6747410771 is in state 'finished'
[2025-07-27 16:18:40] 2025-07-27 20:18:02,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:18:40] 2025-07-27 20:18:03,904 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 16:18:40] 2025-07-27 20:18:03,914 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2788.2856562499987
[2025-07-27 16:18:40] 2025-07-27 20:18:03,979 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747410771/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:18:40] 2025-07-27 20:18:03,981 | INFO     | extracted standard info from prmon json
[2025-07-27 16:18:40] 2025-07-27 20:18:03,981 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:18:40] 2025-07-27 20:18:03,981 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:18:40] 2025-07-27 20:18:03,982 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:18:40] 2025-07-27 20:18:03,982 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:18:40] 2025-07-27 20:18:03,989 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:18:40] 2025-07-27 20:18:03,990 | INFO     | sum of square deviations: 12843790738.997164
[2025-07-27 16:18:40] 2025-07-27 20:18:03,994 | INFO     | sum of deviations: 4151927447.280365
[2025-07-27 16:18:40] 2025-07-27 20:18:03,994 | INFO     | mean x: 1753636903.00289
[2025-07-27 16:18:40] 2025-07-27 20:18:03,994 | INFO     | mean y: 2145113.7196531794
[2025-07-27 16:18:40] 2025-07-27 20:18:03,994 | INFO     | -- intersect: -564741511.740108
[2025-07-27 16:18:40] 2025-07-27 20:18:03,994 | INFO     | intersect: -564741511.740108
[2025-07-27 16:18:40] 2025-07-27 20:18:03,995 | INFO     | chi2: 4.945210853769986
[2025-07-27 16:18:40] 2025-07-27 20:18:03,995 | INFO     | sum of square deviations: 12295024215.21406
[2025-07-27 16:18:40] 2025-07-27 20:18:03,998 | INFO     | sum of deviations: 23971695794.29912
[2025-07-27 16:18:40] 2025-07-27 20:18:03,999 | INFO     | mean x: 1753636750.510264
[2025-07-27 16:18:40] 2025-07-27 20:18:03,999 | INFO     | mean y: 2150553.3431085045
[2025-07-27 16:18:40] 2025-07-27 20:18:03,999 | INFO     | -- intersect: -3416927439.5995336
[2025-07-27 16:18:40] 2025-07-27 20:18:03,999 | INFO     | intersect: -3416927439.5995336
[2025-07-27 16:18:40] 2025-07-27 20:18:04,000 | INFO     | chi2: 4.153139248913227
[2025-07-27 16:18:40] 2025-07-27 20:18:04,000 | INFO     | current chi2=4.153139248913227 (change=16.016943023833292 %)
[2025-07-27 16:18:40] 2025-07-27 20:18:04,000 | INFO     | right removable region: 340
[2025-07-27 16:18:40] 2025-07-27 20:18:04,001 | INFO     | sum of square deviations: 12294938937.231688
[2025-07-27 16:18:40] 2025-07-27 20:18:04,005 | INFO     | sum of deviations: -73651820083.43694
[2025-07-27 16:18:40] 2025-07-27 20:18:04,006 | INFO     | mean x: 1753637055.5073314
[2025-07-27 16:18:40] 2025-07-27 20:18:04,006 | INFO     | mean y: 2166687.5747800586
[2025-07-27 16:18:40] 2025-07-27 20:18:04,007 | INFO     | -- intersect: 10507185180.407997
[2025-07-27 16:18:40] 2025-07-27 20:18:04,008 | INFO     | intersect: 10507185180.407997
[2025-07-27 16:18:40] 2025-07-27 20:18:04,008 | INFO     | chi2: 2.225168857036194
[2025-07-27 16:18:40] 2025-07-27 20:18:04,008 | INFO     | current chi2=2.225168857036194 (change=55.00355954812656 %)
[2025-07-27 16:18:40] 2025-07-27 20:18:04,009 | INFO     | sum of square deviations: 11761927340.925604
[2025-07-27 16:18:40] 2025-07-27 20:18:04,012 | INFO     | sum of deviations: -100106506838.57445
[2025-07-27 16:18:40] 2025-07-27 20:18:04,012 | INFO     | mean x: 1753637208.014881
[2025-07-27 16:18:40] 2025-07-27 20:18:04,013 | INFO     | mean y: 2174226.5148809524
[2025-07-27 16:18:40] 2025-07-27 20:18:04,013 | INFO     | -- intersect: 14927491316.826487
[2025-07-27 16:18:40] 2025-07-27 20:18:04,013 | INFO     | intersect: 14927491316.826487
[2025-07-27 16:18:40] 2025-07-27 20:18:04,013 | INFO     | chi2: 1.8077607351469864
[2025-07-27 16:18:40] 2025-07-27 20:18:04,013 | INFO     | current chi2=1.8077607351469864 (change=18.758491993509782 %)
[2025-07-27 16:18:40] 2025-07-27 20:18:04,013 | INFO     | left removable region: 20
[2025-07-27 16:18:40] 2025-07-27 20:18:04,014 | INFO     | sum of square deviations: 10160332808.621925
[2025-07-27 16:18:40] 2025-07-27 20:18:04,017 | INFO     | sum of deviations: -51419813675.34366
[2025-07-27 16:18:40] 2025-07-27 20:18:04,017 | INFO     | mean x: 1753637330.034375
[2025-07-27 16:18:40] 2025-07-27 20:18:04,017 | INFO     | mean y: 2171366.03125
[2025-07-27 16:18:40] 2025-07-27 20:18:04,017 | INFO     | -- intersect: 8877048445.645823
[2025-07-27 16:18:40] 2025-07-27 20:18:04,017 | INFO     | intersect: 8877048445.645823
[2025-07-27 16:18:40] 2025-07-27 20:18:04,018 | INFO     | chi2: 0.8671845824634853
[2025-07-27 16:18:40] 2025-07-27 20:18:04,018 | INFO     | -- intersect: 8877048445.645823
[2025-07-27 16:18:40] 2025-07-27 20:18:04,018 | INFO     | current memory leak: -5.06 B/s (using 320 data points, chi2=0.87)
[2025-07-27 16:18:40] 2025-07-27 20:18:04,019 | INFO     | could have reported an average CPU frequency of 2757 MHz (15 samples)
[2025-07-27 16:18:40] 2025-07-27 20:18:04,019 | INFO     | ..............................
[2025-07-27 16:18:40] 2025-07-27 20:18:04,019 | INFO     | . Timing measurements:
[2025-07-27 16:18:40] 2025-07-27 20:18:04,019 | INFO     | . get job = 1 s
[2025-07-27 16:18:40] 2025-07-27 20:18:04,020 | INFO     | . initial setup = 6 s
[2025-07-27 16:18:40] 2025-07-27 20:18:04,020 | INFO     | . payload setup = 67 s
[2025-07-27 16:18:40] 2025-07-27 20:18:04,020 | INFO     | . stage-in = 0 s
[2025-07-27 16:18:40] 2025-07-27 20:18:04,020 | INFO     | . payload execution = 21122 s
[2025-07-27 16:18:40] 2025-07-27 20:18:04,020 | INFO     | . stage-out = 5 s
[2025-07-27 16:18:40] 2025-07-27 20:18:04,020 | INFO     | . log creation = 0 s
[2025-07-27 16:18:40] 2025-07-27 20:18:04,020 | INFO     | ..............................
[2025-07-27 16:18:40] 2025-07-27 20:18:04,187 | INFO     | 
[2025-07-27 16:18:40] 2025-07-27 20:18:04,187 | INFO     | job summary report
[2025-07-27 16:18:40] 2025-07-27 20:18:04,187 | INFO     | --------------------------------------------------
[2025-07-27 16:18:40] 2025-07-27 20:18:04,187 | INFO     | PanDA job id: 6747410771
[2025-07-27 16:18:40] 2025-07-27 20:18:04,187 | INFO     | task id: 45743349
[2025-07-27 16:18:40] 2025-07-27 20:18:04,187 | INFO     | errors: (none)
[2025-07-27 16:18:40] 2025-07-27 20:18:04,187 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:18:40] 2025-07-27 20:18:04,187 | INFO     | pilot state: finished 
[2025-07-27 16:18:40] 2025-07-27 20:18:04,187 | INFO     | transexitcode: 0
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | exeerrorcode: 0
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | exeerrordiag: 
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | exitcode: 0
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | exitmsg: OK
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | cpuconsumptiontime: 52407 s
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | nevents: 400
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | neventsw: 0
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | pid: 1184090
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | pgrp: 1184090
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | corecount: 8
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | event service: False
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | sizes: {0: 2396647, 1: 2397332, 2: 2397332, 3: 2397360, 4: 2397587, 5: 2397587, 16: 2397771, 27: 2397799, 38: 2397827, 50: 2397827, 51: 2398117, 61: 2398425, 21194
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | --------------------------------------------------
[2025-07-27 16:18:40] 2025-07-27 20:18:04,188 | INFO     | 
[2025-07-27 16:18:40] 2025-07-27 20:18:04,189 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 16:18:40] 2025-07-27 20:18:04,237 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,238 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,238 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,238 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,238 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,239 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,239 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,239 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,239 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,239 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:18:40] 2025-07-27 20:18:04,239 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,239 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:18:40] 2025-07-27 20:18:04,239 | INFO     | job 6747410771 has completed (purged errors)
[2025-07-27 16:18:40] 2025-07-27 20:18:04,240 | INFO     | overall cleanup function is called
[2025-07-27 16:18:40] 2025-07-27 20:18:05,249 | INFO     | --- collectZombieJob: --- 10, [1184090]
[2025-07-27 16:18:40] 2025-07-27 20:18:05,249 | INFO     | zombie collector waiting for pid 1184090
[2025-07-27 16:18:40] 2025-07-27 20:18:05,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:18:40] 2025-07-27 20:18:05,249 | INFO     | collected zombie processes
[2025-07-27 16:18:40] 2025-07-27 20:18:05,249 | INFO     | will attempt to kill all subprocesses of pid=1184090
[2025-07-27 16:18:40] 2025-07-27 20:18:05,930 | INFO     | process IDs to be killed: [1184090] (in reverse order)
[2025-07-27 16:18:40] 2025-07-27 20:18:06,080 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:18:40] 2025-07-27 20:18:06,080 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:18:40] 2025-07-27 20:18:06,101 | INFO     | did not find any defunct processes belonging to 1184090
[2025-07-27 16:18:40] 2025-07-27 20:18:06,187 | INFO     | did not find any defunct processes belonging to 1184090
[2025-07-27 16:18:40] 2025-07-27 20:18:06,192 | INFO     | ready for new job
[2025-07-27 16:18:40] 2025-07-27 20:18:06,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:18:40] 2025-07-27 20:18:06,194 | INFO     | ***************************************
[2025-07-27 16:18:40] 2025-07-27 20:18:06,195 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:18:40] 2025-07-27 20:18:06,195 | INFO     | ***************************************
[2025-07-27 16:18:40] 2025-07-27 20:18:06,195 | INFO     | 
[2025-07-27 16:18:40] 2025-07-27 20:18:06,202 | INFO     | architecture information:
[2025-07-27 16:18:40] 2025-07-27 20:18:06,207 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:18:40] 2025-07-27 20:18:06,253 | INFO     | cat /etc/os-release:
[2025-07-27 16:18:40] NAME="CentOS Linux"
[2025-07-27 16:18:40] VERSION="7 (Core)"
[2025-07-27 16:18:40] ID="centos"
[2025-07-27 16:18:40] ID_LIKE="rhel fedora"
[2025-07-27 16:18:40] VERSION_ID="7"
[2025-07-27 16:18:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:18:40] ANSI_COLOR="0;31"
[2025-07-27 16:18:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:18:40] HOME_URL="https://www.centos.org/"
[2025-07-27 16:18:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:18:40] 
[2025-07-27 16:18:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:18:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:18:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:18:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:18:40] 
[2025-07-27 16:18:40] 2025-07-27 20:18:06,254 | INFO     | ***************************************
[2025-07-27 16:18:40] 2025-07-27 20:18:06,757 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 16:18:40] 2025-07-27 20:18:06,852 | INFO     | sufficient remaining disk space (76076285952 B)
[2025-07-27 16:18:40] 2025-07-27 20:18:06,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:18:40] 2025-07-27 20:18:06,852 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:18:40] 2025-07-27 20:18:06,852 | INFO     | update_server=False
[2025-07-27 16:18:40] 2025-07-27 20:18:06,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:18:40] 2025-07-27 20:18:06,853 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:18:40] 2025-07-27 20:18:06,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:18:40] 2025-07-27 20:18:06,853 | INFO     | aborting loop
[2025-07-27 16:18:40] 2025-07-27 20:18:07,198 | INFO     | all job control threads have been joined
[2025-07-27 16:18:40] 2025-07-27 20:18:07,435 | INFO     | all payload control threads have been joined
[2025-07-27 16:18:40] 2025-07-27 20:18:07,613 | INFO     | all data control threads have been joined
[2025-07-27 16:18:40] 2025-07-27 20:18:07,861 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:07,861 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:07,907 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:08,207 | INFO     | [job] control thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:08,272 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:08,274 | INFO     | [job] validate thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:08,441 | INFO     | [payload] control thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:08,622 | INFO     | [data] control thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:08,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:18:40] 2025-07-27 20:18:08,835 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:08,870 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:08,871 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:08,875 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:09,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:09,124 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:09,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:18:40] 2025-07-27 20:18:10,219 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:12,797 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:18:40] 2025-07-27 20:18:13,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741994538816)>', '<ExcThread(monitor, started 139741475346176)>']
[2025-07-27 16:18:40] 2025-07-27 20:18:18,398 | INFO     | all workflow threads have been joined
[2025-07-27 16:18:40] 2025-07-27 20:18:18,399 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:18:40] 2025-07-27 20:18:18,399 | INFO     | traces error code: 0
[2025-07-27 16:18:40] 2025-07-27 20:18:18,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:18:40] 2025-07-27 20:18:38,649 | INFO     | PID=1160940 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:18:40] 2025-07-27 20:18:38,649 | INFO     | .. there are 27 such processes running
[2025-07-27 16:18:40] 2025-07-27 20:18:38,657 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:18:40] 2025-07-27 20:18:38,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:18:40] 2025-07-27 20:18:38,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:18:40] 2025-07-27 20:18:38,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:18:40] 2025-07-27 20:18:38,657 | INFO     | [monitor] control thread has ended
[2025-07-27 16:18:40] 2025-07-27 20:18:39,310 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:18:40] 2025-07-27 20:18:39,332 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:18:40] 2025-07-27 20:18:39,354 [wrapper] pilotpid: 1160940
[2025-07-27 16:18:40] 2025-07-27 20:18:39,388 [wrapper] Pilot exit status: 0
[2025-07-27 16:18:40] 2025-07-27 20:18:39,631 [wrapper] pandaids: 6747410771
[2025-07-27 16:18:40] 2025-07-27 20:18:39,890 [wrapper] cleanup supervisor_pilot 3489450 1160941
[2025-07-27 16:18:40] 2025-07-27 20:18:39,897 [wrapper] Test setup, not cleaning
[2025-07-27 16:18:40] 2025-07-27 20:18:39,913 [wrapper] apfmon messages muted
[2025-07-27 16:18:40] 2025-07-27 20:18:39,930 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:18:40] 2025-07-27 20:18:39,948 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:18:40]  *** Error codes and diagnostics ***
[2025-07-27 16:18:40]     "exeErrorCode": 0,
[2025-07-27 16:18:40]     "exeErrorDiag": "",
[2025-07-27 16:18:40]     "pilotErrorCode": 0,
[2025-07-27 16:18:40]     "pilotErrorDiag": "",
[2025-07-27 16:18:40]  *** Listing of results directory ***
[2025-07-27 16:18:40] total 440420
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 07:59 pilot3.tar.gz
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 08:01 queuedata.json
[2025-07-27 16:18:40] -rwx------. 1 boincer umatlas     36292 Jul 27 08:01 runpilot2-wrapper.sh
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas       100 Jul 27 10:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:18:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 10:20 run_atlas
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas       105 Jul 27 10:20 job.xml
[2025-07-27 16:18:40] -rw-r--r--. 2 boincer umatlas 230744296 Jul 27 10:20 EVNT.45743347._002663.pool.root.1
[2025-07-27 16:18:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:20 start_atlas.sh
[2025-07-27 16:18:40] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 10:20 shared
[2025-07-27 16:18:40] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 10:20 input.tar.gz
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas         0 Jul 27 10:20 boinc_lockfile
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 10:20 pandaJob.out
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas    980109 Jul 27 10:22 agis_schedconf.cvmfs.json
[2025-07-27 16:18:40] drwx------. 4 boincer umatlas      4096 Jul 27 10:22 pilot3
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas 212144969 Jul 27 16:16 HITS.45743349._048052.pool.root.1
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas       531 Jul 27 16:17 boinc_task_state.xml
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas      1058 Jul 27 16:17 memory_monitor_summary.json
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas   1593052 Jul 27 16:17 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas    439892 Jul 27 16:17 log.45743349._048052.job.log.tgz.1
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas      6856 Jul 27 16:18 init_data.xml
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas      7831 Jul 27 16:18 heartbeat.json
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 16:18 boinc_mmap_file
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas        28 Jul 27 16:18 wrapper_checkpoint.txt
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas        95 Jul 27 16:18 pilot_heartbeat.json
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas       823 Jul 27 16:18 pilotlog.txt
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas   1669544 Jul 27 16:18 log.45743349._048052.job.log.1
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas       357 Jul 27 16:18 output.list
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas       620 Jul 27 16:18 runtime_log
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas   2129920 Jul 27 16:18 result.tar.gz
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas       656 Jul 27 16:18 UBOLDmPFF07n9Rq4apOajLDm4fhM0noT9bVof3QYDmrV2KDme6C7Rm.diag
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas      8661 Jul 27 16:18 runtime_log.err
[2025-07-27 16:18:40] -rw-r--r--. 1 boincer umatlas     21286 Jul 27 16:18 stderr.txt
[2025-07-27 16:18:40] HITS file was successfully produced:
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas 212144969 Jul 27 16:16 shared/HITS.pool.root.1
[2025-07-27 16:18:40]  *** Contents of shared directory: ***
[2025-07-27 16:18:40] total 435152
[2025-07-27 16:18:40] -rw-r--r--. 2 boincer umatlas 230744296 Jul 27 10:20 ATLAS.root_0
[2025-07-27 16:18:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:20 start_atlas.sh
[2025-07-27 16:18:40] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 10:20 input.tar.gz
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas 212144969 Jul 27 16:16 HITS.pool.root.1
[2025-07-27 16:18:40] -rw-------. 1 boincer umatlas   2129920 Jul 27 16:18 result.tar.gz
16:18:41 (1151441): run_atlas exited; CPU time 53154.231554
16:18:41 (1151441): called boinc_finish(0)

</stderr_txt>
]]>

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