Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
21:26:32 (1966233): wrapper (7.7.26015): starting
21:26:32 (1966233): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 21:26:32] Arguments: --nthreads 8
[2025-07-27 21:26:32] Threads: 8
[2025-07-27 21:26:32] Checking for CVMFS
[2025-07-27 21:26:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 21:26:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 21:26:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 21:26:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 21:26:32] 2.13.1.0 1964990 0 24840 148823 4 3 2982902 4096000 41 130560 0 1163 99.934 1291 1810 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-07-27 21:26:32] CVMFS is ok
[2025-07-27 21:26:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 21:26:32] Checking for apptainer binary...
[2025-07-27 21:26:32] apptainer is not installed, using version from CVMFS
[2025-07-27 21:26:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 21:26:32] senture-z10pe-l
[2025-07-27 21:26:32] apptainer works
[2025-07-27 21:26:33] Set ATHENA_PROC_NUMBER=8
[2025-07-27 21:26:33] Set ATHENA_CORE_NUMBER=8
[2025-07-27 21:26:33] Starting ATLAS job with PandaID=6747410762
[2025-07-27 21:26:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:08:20]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:08:20]  protocol_id=None
[2025-07-27 23:08:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 23:08:20]  replicas=None
[2025-07-27 23:08:20]  scope=mc23_13p6TeV
[2025-07-27 23:08:20]  status=None
[2025-07-27 23:08:20]  status_code=0
[2025-07-27 23:08:20]  storage_token=
[2025-07-27 23:08:20]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-6747410762/log.45743349._048043.job.log.tgz.1
[2025-07-27 23:08:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/92/log.45743349._048043.job.log.tgz.1
[2025-07-27 23:08:20]  workdir=None
[2025-07-27 23:08:20] ]
[2025-07-27 23:08:20] 2025-07-27 22:07:37,076 | INFO     | transferring file log.45743349._048043.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-6747410762/log.45743349._048043.job.log.tgz.1 to /var/lib/boinc
[2025-07-27 23:08:20] 2025-07-27 22:07:37,076 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-6747410762/log.45743349._048043.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.457433
[2025-07-27 23:08:20] 2025-07-27 22:07:37,100 | INFO     | adding to output.list: log.45743349._048043.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/92/log.45743349._048043.job.log.tg
[2025-07-27 23:08:20] 2025-07-27 22:07:37,101 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 23:08:20] 2025-07-27 22:07:37,101 | INFO     | summary of transferred files:
[2025-07-27 23:08:20] 2025-07-27 22:07:37,101 | INFO     |  -- lfn=log.45743349._048043.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 23:08:20] 2025-07-27 22:07:37,101 | INFO     | stage-out finished correctly
[2025-07-27 23:08:20] 2025-07-27 22:07:37,641 | INFO     | monitor loop #440: job 0:6747410762 is in state 'finished'
[2025-07-27 23:08:20] 2025-07-27 22:07:37,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:08:20] 2025-07-27 22:07:38,458 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 23:08:20] 2025-07-27 22:07:38,541 | INFO     | job 6747410762 has state=finished
[2025-07-27 23:08:20] 2025-07-27 22:07:38,542 | INFO     | preparing for final server update for job 6747410762 in state='finished'
[2025-07-27 23:08:20] 2025-07-27 22:07:38,542 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:08:20] 2025-07-27 22:07:38,543 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:08:20] 2025-07-27 22:07:38,543 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:08:20] 2025-07-27 22:07:38,543 | INFO     | job 6747410762 has finished - writing final server update
[2025-07-27 23:08:20] 2025-07-27 22:07:38,543 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:08:20] 2025-07-27 22:07:38,550 | INFO     | executing command: lscpu
[2025-07-27 23:08:20] 2025-07-27 22:07:38,593 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:08:20] 2025-07-27 22:07:40,144 | INFO     | monitor loop #441: job 0:6747410762 is in state 'finished'
[2025-07-27 23:08:20] 2025-07-27 22:07:40,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:08:20] 2025-07-27 22:07:42,647 | INFO     | monitor loop #442: job 0:6747410762 is in state 'finished'
[2025-07-27 23:08:20] 2025-07-27 22:07:42,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:08:20] 2025-07-27 22:07:45,150 | INFO     | monitor loop #443: job 0:6747410762 is in state 'finished'
[2025-07-27 23:08:20] 2025-07-27 22:07:45,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:08:20] 2025-07-27 22:07:46,775 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 23:08:20] 2025-07-27 22:07:46,779 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2600.0039999999976
[2025-07-27 23:08:20] 2025-07-27 22:07:46,789 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6747410762/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:08:20] 2025-07-27 22:07:46,790 | INFO     | extracted standard info from prmon json
[2025-07-27 23:08:20] 2025-07-27 22:07:46,790 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:08:20] 2025-07-27 22:07:46,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:08:20] 2025-07-27 22:07:46,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:08:20] 2025-07-27 22:07:46,791 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:08:20] 2025-07-27 22:07:46,793 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:08:20] 2025-07-27 22:07:46,793 | INFO     | sum of square deviations: 241429643.0
[2025-07-27 23:08:20] 2025-07-27 22:07:46,793 | INFO     | sum of deviations: -1825408530.0000002
[2025-07-27 23:08:20] 2025-07-27 22:07:46,794 | INFO     | mean x: 1753651108.5
[2025-07-27 23:08:20] 2025-07-27 22:07:46,794 | INFO     | mean y: 2511952.8260869565
[2025-07-27 23:08:20] 2025-07-27 22:07:46,794 | INFO     | -- intersect: 13261570170.875376
[2025-07-27 23:08:20] 2025-07-27 22:07:46,794 | INFO     | intersect: 13261570170.875376
[2025-07-27 23:08:20] 2025-07-27 22:07:46,794 | INFO     | chi2: 0.0027058311231497904
[2025-07-27 23:08:20] 2025-07-27 22:07:46,794 | INFO     | -- intersect: 13261570170.875376
[2025-07-27 23:08:20] 2025-07-27 22:07:46,794 | INFO     | current memory leak: -7.56 B/s (using 92 data points, chi2=0.00)
[2025-07-27 23:08:20] 2025-07-27 22:07:46,795 | INFO     | could have reported an average CPU frequency of 2600 MHz (7 samples)
[2025-07-27 23:08:20] 2025-07-27 22:07:46,795 | INFO     | ..............................
[2025-07-27 23:08:20] 2025-07-27 22:07:46,795 | INFO     | . Timing measurements:
[2025-07-27 23:08:20] 2025-07-27 22:07:46,795 | INFO     | . get job = 0 s
[2025-07-27 23:08:20] 2025-07-27 22:07:46,795 | INFO     | . initial setup = 1 s
[2025-07-27 23:08:20] 2025-07-27 22:07:46,795 | INFO     | . payload setup = 5 s
[2025-07-27 23:08:20] 2025-07-27 22:07:46,795 | INFO     | . stage-in = 0 s
[2025-07-27 23:08:20] 2025-07-27 22:07:46,795 | INFO     | . payload execution = 6029 s
[2025-07-27 23:08:20] 2025-07-27 22:07:46,795 | INFO     | . stage-out = 0 s
[2025-07-27 23:08:20] 2025-07-27 22:07:46,795 | INFO     | . log creation = 0 s
[2025-07-27 23:08:20] 2025-07-27 22:07:46,795 | INFO     | ..............................
[2025-07-27 23:08:20] 2025-07-27 22:07:47,065 | INFO     | 
[2025-07-27 23:08:20] 2025-07-27 22:07:47,065 | INFO     | job summary report
[2025-07-27 23:08:20] 2025-07-27 22:07:47,065 | INFO     | --------------------------------------------------
[2025-07-27 23:08:20] 2025-07-27 22:07:47,065 | INFO     | PanDA job id: 6747410762
[2025-07-27 23:08:20] 2025-07-27 22:07:47,065 | INFO     | task id: 45743349
[2025-07-27 23:08:20] 2025-07-27 22:07:47,065 | INFO     | errors: (none)
[2025-07-27 23:08:20] 2025-07-27 22:07:47,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:08:20] 2025-07-27 22:07:47,065 | INFO     | pilot state: finished 
[2025-07-27 23:08:20] 2025-07-27 22:07:47,065 | INFO     | transexitcode: 0
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | exeerrorcode: 0
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | exeerrordiag: 
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | exitcode: 0
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | exitmsg: OK
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | cpuconsumptiontime: 45996 s
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | nevents: 400
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | neventsw: 0
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | pid: 2051254
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | pgrp: 2051254
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | corecount: 8
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | event service: False
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | sizes: {0: 2397482, 3: 2397744, 11: 2397772, 6038: 2424573, 6039: 2433640, 6041: 2433640, 6049: 2433962}
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | --------------------------------------------------
[2025-07-27 23:08:20] 2025-07-27 22:07:47,066 | INFO     | 
[2025-07-27 23:08:20] 2025-07-27 22:07:47,067 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-07-27 23:08:20] 2025-07-27 22:07:47,090 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:08:20] 2025-07-27 22:07:47,092 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,092 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:08:20] 2025-07-27 22:07:47,092 | INFO     | job 6747410762 has completed (purged errors)
[2025-07-27 23:08:20] 2025-07-27 22:07:47,092 | INFO     | overall cleanup function is called
[2025-07-27 23:08:20] 2025-07-27 22:07:48,100 | INFO     | --- collectZombieJob: --- 10, [2051254]
[2025-07-27 23:08:20] 2025-07-27 22:07:48,100 | INFO     | zombie collector waiting for pid 2051254
[2025-07-27 23:08:20] 2025-07-27 22:07:48,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:08:20] 2025-07-27 22:07:48,101 | INFO     | collected zombie processes
[2025-07-27 23:08:20] 2025-07-27 22:07:48,101 | INFO     | will attempt to kill all subprocesses of pid=2051254
[2025-07-27 23:08:20] 2025-07-27 22:07:48,355 | INFO     | process IDs to be killed: [2051254] (in reverse order)
[2025-07-27 23:08:20] 2025-07-27 22:07:48,451 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:08:20] 2025-07-27 22:07:48,452 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:08:20] 2025-07-27 22:07:48,459 | INFO     | did not find any defunct processes belonging to 2051254
[2025-07-27 23:08:20] 2025-07-27 22:07:48,466 | INFO     | did not find any defunct processes belonging to 2051254
[2025-07-27 23:08:20] 2025-07-27 22:07:48,466 | INFO     | ready for new job
[2025-07-27 23:08:20] 2025-07-27 22:07:48,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:08:20] 2025-07-27 22:07:48,468 | INFO     | ***************************************
[2025-07-27 23:08:20] 2025-07-27 22:07:48,468 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:08:20] 2025-07-27 22:07:48,468 | INFO     | ***************************************
[2025-07-27 23:08:20] 2025-07-27 22:07:48,468 | INFO     | 
[2025-07-27 23:08:20] 2025-07-27 22:07:48,471 | INFO     | pilot is running in a VM
[2025-07-27 23:08:20] 2025-07-27 22:07:48,471 | INFO     | architecture information:
[2025-07-27 23:08:20] 2025-07-27 22:07:48,472 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:08:20] 2025-07-27 22:07:48,488 | INFO     | cat /etc/os-release:
[2025-07-27 23:08:20] NAME="CentOS Linux"
[2025-07-27 23:08:20] VERSION="7 (Core)"
[2025-07-27 23:08:20] ID="centos"
[2025-07-27 23:08:20] ID_LIKE="rhel fedora"
[2025-07-27 23:08:20] VERSION_ID="7"
[2025-07-27 23:08:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:08:20] ANSI_COLOR="0;31"
[2025-07-27 23:08:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:08:20] HOME_URL="https://www.centos.org/"
[2025-07-27 23:08:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:08:20] 
[2025-07-27 23:08:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:08:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:08:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:08:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:08:20] 
[2025-07-27 23:08:20] 2025-07-27 22:07:48,489 | INFO     | ***************************************
[2025-07-27 23:08:20] 2025-07-27 22:07:48,992 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-07-27 23:08:20] 2025-07-27 22:07:49,014 | INFO     | sufficient remaining disk space (112740794368 B)
[2025-07-27 23:08:20] 2025-07-27 22:07:49,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:08:20] 2025-07-27 22:07:49,015 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:08:20] 2025-07-27 22:07:49,015 | INFO     | update_server=False
[2025-07-27 23:08:20] 2025-07-27 22:07:49,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:08:20] 2025-07-27 22:07:49,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:08:20] 2025-07-27 22:07:49,016 | INFO     | aborting loop
[2025-07-27 23:08:20] 2025-07-27 22:07:49,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:08:20] 2025-07-27 22:07:49,156 | INFO     | all payload control threads have been joined
[2025-07-27 23:08:20] 2025-07-27 22:07:49,874 | INFO     | all data control threads have been joined
[2025-07-27 23:08:20] 2025-07-27 22:07:50,021 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:50,021 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:50,078 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:50,132 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:50,162 | INFO     | [payload] control thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:50,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:08:20] 2025-07-27 22:07:50,292 | INFO     | all job control threads have been joined
[2025-07-27 23:08:20] 2025-07-27 22:07:50,747 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:50,880 | INFO     | [data] control thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:51,027 | INFO     | [job] validate thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:51,163 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:51,222 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:51,224 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:51,227 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:51,298 | INFO     | [job] control thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:51,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:08:20] 2025-07-27 22:07:52,206 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:52,897 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:53,062 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:08:20] 2025-07-27 22:07:53,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125646679492416)>', '<ExcThread(monitor, started 125646265095936)>']
[2025-07-27 23:08:20] 2025-07-27 22:07:58,435 | INFO     | all workflow threads have been joined
[2025-07-27 23:08:20] 2025-07-27 22:07:58,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:08:20] 2025-07-27 22:07:58,436 | INFO     | traces error code: 0
[2025-07-27 23:08:20] 2025-07-27 22:07:58,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:08:20] 2025-07-27 22:08:19,964 | INFO     | PID=1996022 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 23:08:20] 2025-07-27 22:08:19,965 | INFO     | .. there are 8 such processes running
[2025-07-27 23:08:20] 2025-07-27 22:08:19,966 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:08:20] 2025-07-27 22:08:19,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:08:20] 2025-07-27 22:08:19,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:08:20] 2025-07-27 22:08:19,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:08:20] 2025-07-27 22:08:19,966 | INFO     | [monitor] control thread has ended
[2025-07-27 23:08:20] 2025-07-27 22:08:20,129 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:08:20] 2025-07-27 22:08:20,133 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:08:20] 2025-07-27 22:08:20,136 [wrapper] pilotpid: 1996022
[2025-07-27 23:08:20] 2025-07-27 22:08:20,139 [wrapper] Pilot exit status: 0
[2025-07-27 23:08:20] 2025-07-27 22:08:20,150 [wrapper] pandaids: 6747410762
[2025-07-27 23:08:20] 2025-07-27 22:08:20,208 [wrapper] cleanup supervisor_pilot 2146344 1996024
[2025-07-27 23:08:20] 2025-07-27 22:08:20,212 [wrapper] Test setup, not cleaning
[2025-07-27 23:08:20] 2025-07-27 22:08:20,216 [wrapper] apfmon messages muted
[2025-07-27 23:08:20] 2025-07-27 22:08:20,219 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:08:20] 2025-07-27 22:08:20,224 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:08:20]  *** Error codes and diagnostics ***
[2025-07-27 23:08:20]     "exeErrorCode": 0,
[2025-07-27 23:08:20]     "exeErrorDiag": "",
[2025-07-27 23:08:20]     "pilotErrorCode": 0,
[2025-07-27 23:08:20]     "pilotErrorDiag": "",
[2025-07-27 23:08:20]  *** Listing of results directory ***
[2025-07-27 23:08:20] total 429472
[2025-07-27 23:08:20] -rwx------ 1 boinc boinc     36292 Jul 27 12:59 runpilot2-wrapper.sh
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc    530466 Jul 27 12:59 pilot3.tar.gz
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc      5112 Jul 27 12:59 queuedata.json
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc       100 Jul 27 21:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:08:20] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 21:26 run_atlas
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc       105 Jul 27 21:26 job.xml
[2025-07-27 23:08:20] -rw-r--r-- 2 boinc boinc 230185988 Jul 27 21:26 EVNT.45743347._002662.pool.root.1
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc      6663 Jul 27 21:26 init_data.xml
[2025-07-27 23:08:20] drwxrwx--x 2 boinc boinc      4096 Jul 27 21:26 shared
[2025-07-27 23:08:20] -rw-r--r-- 2 boinc boinc    542894 Jul 27 21:26 input.tar.gz
[2025-07-27 23:08:20] -rw-r--r-- 2 boinc boinc     15095 Jul 27 21:26 start_atlas.sh
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc         0 Jul 27 21:26 boinc_lockfile
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc      2563 Jul 27 21:26 pandaJob.out
[2025-07-27 23:08:20] -rw------- 1 boinc boinc    980109 Jul 27 21:26 agis_schedconf.cvmfs.json
[2025-07-27 23:08:20] -rw------- 1 boinc boinc   1593052 Jul 27 21:26 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:08:20] drwx------ 4 boinc boinc      4096 Jul 27 21:26 pilot3
[2025-07-27 23:08:20] -rw------- 1 boinc boinc 203891394 Jul 27 23:07 HITS.45743349._048043.pool.root.1
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc       530 Jul 27 23:07 boinc_task_state.xml
[2025-07-27 23:08:20] -rw------- 1 boinc boinc      1024 Jul 27 23:07 memory_monitor_summary.json
[2025-07-27 23:08:20] -rw------- 1 boinc boinc    326212 Jul 27 23:07 log.45743349._048043.job.log.tgz.1
[2025-07-27 23:08:20] -rw------- 1 boinc boinc      7782 Jul 27 23:07 heartbeat.json
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc      8192 Jul 27 23:08 boinc_mmap_file
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc        27 Jul 27 23:08 wrapper_checkpoint.txt
[2025-07-27 23:08:20] -rw------- 1 boinc boinc        95 Jul 27 23:08 pilot_heartbeat.json
[2025-07-27 23:08:20] -rw------- 1 boinc boinc       822 Jul 27 23:08 pilotlog.txt
[2025-07-27 23:08:20] -rw------- 1 boinc boinc    581994 Jul 27 23:08 log.45743349._048043.job.log.1
[2025-07-27 23:08:20] -rw------- 1 boinc boinc       357 Jul 27 23:08 output.list
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc       620 Jul 27 23:08 runtime_log
[2025-07-27 23:08:20] -rw------- 1 boinc boinc    931840 Jul 27 23:08 result.tar.gz
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc      8749 Jul 27 23:08 runtime_log.err
[2025-07-27 23:08:20] -rw------- 1 boinc boinc       649 Jul 27 23:08 aJxNDmHDF07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2CVLDmqlimDo.diag
[2025-07-27 23:08:20] -rw-r--r-- 1 boinc boinc     21542 Jul 27 23:08 stderr.txt
[2025-07-27 23:08:20] HITS file was successfully produced:
[2025-07-27 23:08:20] -rw------- 1 boinc boinc 203891394 Jul 27 23:07 shared/HITS.pool.root.1
[2025-07-27 23:08:20]  *** Contents of shared directory: ***
[2025-07-27 23:08:20] total 425376
[2025-07-27 23:08:20] -rw-r--r-- 2 boinc boinc 230185988 Jul 27 21:26 ATLAS.root_0
[2025-07-27 23:08:20] -rw-r--r-- 2 boinc boinc    542894 Jul 27 21:26 input.tar.gz
[2025-07-27 23:08:20] -rw-r--r-- 2 boinc boinc     15095 Jul 27 21:26 start_atlas.sh
[2025-07-27 23:08:20] -rw------- 1 boinc boinc 203891394 Jul 27 23:07 HITS.pool.root.1
[2025-07-27 23:08:20] -rw------- 1 boinc boinc    931840 Jul 27 23:08 result.tar.gz
23:08:22 (1966233): run_atlas exited; CPU time 46153.548323
23:08:22 (1966233): called boinc_finish(0)

</stderr_txt>
]]>

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