Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:14:26 (28766): wrapper (7.7.26015): starting
10:14:26 (28766): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 10:14:26] Arguments: --nthreads 8
[2025-07-27 10:14:26] Threads: 8
[2025-07-27 10:14:26] Checking for CVMFS
[2025-07-27 10:14:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:14:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:14:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:14:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:14:27] 2.11.2.0 2893 112061 86656 148815 4 1 14968848 20275201 1 130560 0 28774177 99.962 9635415 10753 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 10:14:27] CVMFS is ok
[2025-07-27 10:14:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 10:14:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 10:14:27] Further information can be found at the LHC@home message board.
[2025-07-27 10:14:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:14:27] Checking for apptainer binary...
[2025-07-27 10:14:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 10:14:27] Running /usr/bin/apptainer --version
[2025-07-27 10:14:27] apptainer version 1.3.2-1.el7
[2025-07-27 10:14:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:14:29] c-115-6.aglt2.org
[2025-07-27 10:14:29] apptainer works
[2025-07-27 10:14:29] Set ATHENA_PROC_NUMBER=8
[2025-07-27 10:14:29] Set ATHENA_CORE_NUMBER=8
[2025-07-27 10:14:29] Starting ATLAS job with PandaID=6746741968
[2025-07-27 10:14:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:44:02]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:44:02] 2025-07-27 16:43:23,975 | INFO     | PID=32362 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 12:44:02] 2025-07-27 16:43:25,970 | INFO     | monitor loop #661: job 0:6746741968 is in state 'finished'
[2025-07-27 12:44:02] 2025-07-27 16:43:25,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:44:02] 2025-07-27 16:43:28,480 | INFO     | monitor loop #662: job 0:6746741968 is in state 'finished'
[2025-07-27 12:44:02] 2025-07-27 16:43:28,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:44:02] 2025-07-27 16:43:29,587 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 12:44:02] 2025-07-27 16:43:29,590 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-07-27 12:44:02] 2025-07-27 16:43:29,592 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746741968/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:44:02] 2025-07-27 16:43:29,592 | INFO     | extracted standard info from prmon json
[2025-07-27 12:44:02] 2025-07-27 16:43:29,593 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:44:02] 2025-07-27 16:43:29,593 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:44:02] 2025-07-27 16:43:29,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:44:02] 2025-07-27 16:43:29,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:44:02] 2025-07-27 16:43:29,596 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:44:02] 2025-07-27 16:43:29,596 | INFO     | sum of square deviations: 964976232.5
[2025-07-27 12:44:02] 2025-07-27 16:43:29,597 | INFO     | sum of deviations: -15488936146.000002
[2025-07-27 12:44:02] 2025-07-27 16:43:29,597 | INFO     | mean x: 1753630140.5
[2025-07-27 12:44:02] 2025-07-27 16:43:29,597 | INFO     | mean y: 2585313.684931507
[2025-07-27 12:44:02] 2025-07-27 16:43:29,597 | INFO     | -- intersect: 28150289220.895428
[2025-07-27 12:44:02] 2025-07-27 16:43:29,597 | INFO     | intersect: 28150289220.895428
[2025-07-27 12:44:02] 2025-07-27 16:43:29,597 | INFO     | chi2: 1.566765956996073
[2025-07-27 12:44:02] 2025-07-27 16:43:29,598 | INFO     | sum of square deviations: 869188390.0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,598 | INFO     | sum of deviations: -13974983490.0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,599 | INFO     | mean x: 1753629988.0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,599 | INFO     | mean y: 2587725.212765957
[2025-07-27 12:44:02] 2025-07-27 16:43:29,599 | INFO     | -- intersect: 28197798811.579094
[2025-07-27 12:44:02] 2025-07-27 16:43:29,599 | INFO     | intersect: 28197798811.579094
[2025-07-27 12:44:02] 2025-07-27 16:43:29,599 | INFO     | chi2: 1.5666775054123778
[2025-07-27 12:44:02] 2025-07-27 16:43:29,599 | INFO     | current chi2=1.5666775054123778 (change=0.00564548797478208 %)
[2025-07-27 12:44:02] 2025-07-27 16:43:29,599 | INFO     | right removable region: 140
[2025-07-27 12:44:02] 2025-07-27 16:43:29,600 | INFO     | sum of square deviations: 869188390.0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,600 | INFO     | sum of deviations: -37314342634.99999
[2025-07-27 12:44:02] 2025-07-27 16:43:29,600 | INFO     | mean x: 1753630293.0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,601 | INFO     | mean y: 2619521.404255319
[2025-07-27 12:44:02] 2025-07-27 16:43:29,601 | INFO     | -- intersect: 75286139597.08939
[2025-07-27 12:44:02] 2025-07-27 16:43:29,601 | INFO     | intersect: 75286139597.08939
[2025-07-27 12:44:02] 2025-07-27 16:43:29,601 | INFO     | chi2: 0.13160300560827992
[2025-07-27 12:44:02] 2025-07-27 16:43:29,601 | INFO     | current chi2=0.13160300560827992 (change=91.60034049625385 %)
[2025-07-27 12:44:02] 2025-07-27 16:43:29,601 | INFO     | sum of square deviations: 779958810.0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,602 | INFO     | sum of deviations: -35467046420.5
[2025-07-27 12:44:02] 2025-07-27 16:43:29,602 | INFO     | mean x: 1753630445.5
[2025-07-27 12:44:02] 2025-07-27 16:43:29,602 | INFO     | mean y: 2616323.845588235
[2025-07-27 12:44:02] 2025-07-27 16:43:29,602 | INFO     | -- intersect: 79745407375.78664
[2025-07-27 12:44:02] 2025-07-27 16:43:29,602 | INFO     | intersect: 79745407375.78664
[2025-07-27 12:44:02] 2025-07-27 16:43:29,603 | INFO     | chi2: 0.12298702649010602
[2025-07-27 12:44:02] 2025-07-27 16:43:29,603 | INFO     | current chi2=0.12298702649010602 (change=6.5469470688379285 %)
[2025-07-27 12:44:02] 2025-07-27 16:43:29,603 | INFO     | left removable region: 20
[2025-07-27 12:44:02] 2025-07-27 16:43:29,603 | INFO     | sum of square deviations: 535786790.0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,604 | INFO     | sum of deviations: -27359168102.500004
[2025-07-27 12:44:02] 2025-07-27 16:43:29,604 | INFO     | mean x: 1753630567.5
[2025-07-27 12:44:02] 2025-07-27 16:43:29,604 | INFO     | mean y: 2609033.825
[2025-07-27 12:44:02] 2025-07-27 16:43:29,604 | INFO     | -- intersect: 89549186854.2953
[2025-07-27 12:44:02] 2025-07-27 16:43:29,604 | INFO     | intersect: 89549186854.2953
[2025-07-27 12:44:02] 2025-07-27 16:43:29,604 | INFO     | chi2: 0.11388878355815571
[2025-07-27 12:44:02] 2025-07-27 16:43:29,605 | INFO     | -- intersect: 89549186854.2953
[2025-07-27 12:44:02] 2025-07-27 16:43:29,605 | INFO     | current memory leak: -51.06 B/s (using 120 data points, chi2=0.11)
[2025-07-27 12:44:02] 2025-07-27 16:43:29,605 | INFO     | could have reported an average CPU frequency of 2163 MHz (8 samples)
[2025-07-27 12:44:02] 2025-07-27 16:43:29,605 | INFO     | ..............................
[2025-07-27 12:44:02] 2025-07-27 16:43:29,605 | INFO     | . Timing measurements:
[2025-07-27 12:44:02] 2025-07-27 16:43:29,605 | INFO     | . get job = 0 s
[2025-07-27 12:44:02] 2025-07-27 16:43:29,606 | INFO     | . initial setup = 2 s
[2025-07-27 12:44:02] 2025-07-27 16:43:29,606 | INFO     | . payload setup = 11 s
[2025-07-27 12:44:02] 2025-07-27 16:43:29,606 | INFO     | . stage-in = 0 s
[2025-07-27 12:44:02] 2025-07-27 16:43:29,606 | INFO     | . payload execution = 8882 s
[2025-07-27 12:44:02] 2025-07-27 16:43:29,606 | INFO     | . stage-out = 0 s
[2025-07-27 12:44:02] 2025-07-27 16:43:29,606 | INFO     | . log creation = 0 s
[2025-07-27 12:44:02] 2025-07-27 16:43:29,606 | INFO     | ..............................
[2025-07-27 12:44:02] 2025-07-27 16:43:29,699 | INFO     | 
[2025-07-27 12:44:02] 2025-07-27 16:43:29,700 | INFO     | job summary report
[2025-07-27 12:44:02] 2025-07-27 16:43:29,700 | INFO     | --------------------------------------------------
[2025-07-27 12:44:02] 2025-07-27 16:43:29,700 | INFO     | PanDA job id: 6746741968
[2025-07-27 12:44:02] 2025-07-27 16:43:29,700 | INFO     | task id: 45759704
[2025-07-27 12:44:02] 2025-07-27 16:43:29,700 | INFO     | errors: (none)
[2025-07-27 12:44:02] 2025-07-27 16:43:29,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:44:02] 2025-07-27 16:43:29,701 | INFO     | pilot state: finished 
[2025-07-27 12:44:02] 2025-07-27 16:43:29,701 | INFO     | transexitcode: 0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,701 | INFO     | exeerrorcode: 0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,701 | INFO     | exeerrordiag: 
[2025-07-27 12:44:02] 2025-07-27 16:43:29,701 | INFO     | exitcode: 0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,702 | INFO     | exitmsg: OK
[2025-07-27 12:44:02] 2025-07-27 16:43:29,702 | INFO     | cpuconsumptiontime: 67031 s
[2025-07-27 12:44:02] 2025-07-27 16:43:29,702 | INFO     | nevents: 400
[2025-07-27 12:44:02] 2025-07-27 16:43:29,702 | INFO     | neventsw: 0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,702 | INFO     | pid: 6724
[2025-07-27 12:44:02] 2025-07-27 16:43:29,702 | INFO     | pgrp: 6724
[2025-07-27 12:44:02] 2025-07-27 16:43:29,703 | INFO     | corecount: 8
[2025-07-27 12:44:02] 2025-07-27 16:43:29,703 | INFO     | event service: False
[2025-07-27 12:44:02] 2025-07-27 16:43:29,703 | INFO     | sizes: {0: 2397295, 1: 2397494, 6: 2397756, 12: 2397784, 8898: 2425981, 8900: 2434979, 8903: 2435163, 8909: 2435357}
[2025-07-27 12:44:02] 2025-07-27 16:43:29,703 | INFO     | --------------------------------------------------
[2025-07-27 12:44:02] 2025-07-27 16:43:29,703 | INFO     | 
[2025-07-27 12:44:02] 2025-07-27 16:43:29,704 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 12:44:02] 2025-07-27 16:43:29,733 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,733 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,734 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,734 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,734 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,734 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,734 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,736 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,736 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,736 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,737 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:44:02] 2025-07-27 16:43:29,737 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,737 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:44:02] 2025-07-27 16:43:29,737 | INFO     | job 6746741968 has completed (purged errors)
[2025-07-27 12:44:02] 2025-07-27 16:43:29,738 | INFO     | overall cleanup function is called
[2025-07-27 12:44:02] 2025-07-27 16:43:30,742 | INFO     | --- collectZombieJob: --- 10, [6724]
[2025-07-27 12:44:02] 2025-07-27 16:43:30,742 | INFO     | zombie collector waiting for pid 6724
[2025-07-27 12:44:02] 2025-07-27 16:43:30,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:44:02] 2025-07-27 16:43:30,742 | INFO     | collected zombie processes
[2025-07-27 12:44:02] 2025-07-27 16:43:30,742 | INFO     | will attempt to kill all subprocesses of pid=6724
[2025-07-27 12:44:02] 2025-07-27 16:43:30,825 | INFO     | process IDs to be killed: [6724] (in reverse order)
[2025-07-27 12:44:02] 2025-07-27 16:43:30,885 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:44:02] 2025-07-27 16:43:30,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:44:02] 2025-07-27 16:43:30,891 | INFO     | did not find any defunct processes belonging to 6724
[2025-07-27 12:44:02] 2025-07-27 16:43:30,894 | INFO     | did not find any defunct processes belonging to 6724
[2025-07-27 12:44:02] 2025-07-27 16:43:30,895 | INFO     | ready for new job
[2025-07-27 12:44:02] 2025-07-27 16:43:30,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:44:02] 2025-07-27 16:43:30,897 | INFO     | ***************************************
[2025-07-27 12:44:02] 2025-07-27 16:43:30,897 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:44:02] 2025-07-27 16:43:30,897 | INFO     | ***************************************
[2025-07-27 12:44:02] 2025-07-27 16:43:30,897 | INFO     | 
[2025-07-27 12:44:02] 2025-07-27 16:43:30,898 | INFO     | architecture information:
[2025-07-27 12:44:02] 2025-07-27 16:43:30,898 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:44:02] 2025-07-27 16:43:30,918 | INFO     | cat /etc/os-release:
[2025-07-27 12:44:02] NAME="CentOS Linux"
[2025-07-27 12:44:02] VERSION="7 (Core)"
[2025-07-27 12:44:02] ID="centos"
[2025-07-27 12:44:02] ID_LIKE="rhel fedora"
[2025-07-27 12:44:02] VERSION_ID="7"
[2025-07-27 12:44:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:44:02] ANSI_COLOR="0;31"
[2025-07-27 12:44:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:44:02] HOME_URL="https://www.centos.org/"
[2025-07-27 12:44:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:44:02] 
[2025-07-27 12:44:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:44:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:44:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:44:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:44:02] 
[2025-07-27 12:44:02] 2025-07-27 16:43:30,919 | INFO     | ***************************************
[2025-07-27 12:44:02] 2025-07-27 16:43:31,422 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 12:44:02] 2025-07-27 16:43:31,443 | INFO     | sufficient remaining disk space (18595446784 B)
[2025-07-27 12:44:02] 2025-07-27 16:43:31,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:44:02] 2025-07-27 16:43:31,444 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:44:02] 2025-07-27 16:43:31,445 | INFO     | update_server=False
[2025-07-27 12:44:02] 2025-07-27 16:43:31,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:44:02] 2025-07-27 16:43:31,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:44:02] 2025-07-27 16:43:31,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:44:02] 2025-07-27 16:43:31,454 | INFO     | all data control threads have been joined
[2025-07-27 12:44:02] 2025-07-27 16:43:31,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:44:02] 2025-07-27 16:43:31,989 | INFO     | aborting loop
[2025-07-27 12:44:02] 2025-07-27 16:43:32,451 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:32,452 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:32,459 | INFO     | [data] control thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:32,466 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:32,837 | INFO     | all payload control threads have been joined
[2025-07-27 12:44:02] 2025-07-27 16:43:32,994 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:33,052 | INFO     | all job control threads have been joined
[2025-07-27 12:44:02] 2025-07-27 16:43:33,059 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:33,161 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:33,168 | INFO     | [job] validate thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:33,196 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:33,211 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:33,452 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:33,769 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:33,840 | INFO     | [payload] control thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:34,051 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:34,058 | INFO     | [job] control thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:34,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:44:02] 2025-07-27 16:43:38,215 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:44:02] 2025-07-27 16:43:39,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428636436288)>', '<ExcThread(monitor, started 140427940308736)>']
[2025-07-27 12:44:02] 2025-07-27 16:43:44,993 | INFO     | all workflow threads have been joined
[2025-07-27 12:44:02] 2025-07-27 16:43:44,993 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:44:02] 2025-07-27 16:43:44,994 | INFO     | traces error code: 0
[2025-07-27 12:44:02] 2025-07-27 16:43:44,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:44:02] 2025-07-27 16:44:02,167 | INFO     | PID=32362 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 12:44:02] 2025-07-27 16:44:02,168 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:44:02] 2025-07-27 16:44:02,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:44:02] 2025-07-27 16:44:02,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:44:02] 2025-07-27 16:44:02,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:44:02] 2025-07-27 16:44:02,168 | INFO     | [monitor] control thread has ended
[2025-07-27 12:44:02] 2025-07-27 16:44:02,262 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:44:02] 2025-07-27 16:44:02,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:44:02] 2025-07-27 16:44:02,271 [wrapper] pilotpid: 32362
[2025-07-27 12:44:02] 2025-07-27 16:44:02,276 [wrapper] Pilot exit status: 0
[2025-07-27 12:44:02] 2025-07-27 16:44:02,295 [wrapper] pandaids: 6746741968
[2025-07-27 12:44:02] 2025-07-27 16:44:02,338 [wrapper] cleanup supervisor_pilot 23409 32363
[2025-07-27 12:44:02] 2025-07-27 16:44:02,343 [wrapper] Test setup, not cleaning
[2025-07-27 12:44:02] 2025-07-27 16:44:02,347 [wrapper] apfmon messages muted
[2025-07-27 12:44:02] 2025-07-27 16:44:02,352 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:44:02] 2025-07-27 16:44:02,356 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:44:02]  *** Error codes and diagnostics ***
[2025-07-27 12:44:02]     "exeErrorCode": 0,
[2025-07-27 12:44:02]     "exeErrorDiag": "",
[2025-07-27 12:44:02]     "pilotErrorCode": 0,
[2025-07-27 12:44:02]     "pilotErrorDiag": "",
[2025-07-27 12:44:02]  *** Listing of results directory ***
[2025-07-27 12:44:02] total 405868
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 04:38 pilot3.tar.gz
[2025-07-27 12:44:02] -rwx------ 1 boincer umatlas     36292 Jul 27 04:54 runpilot2-wrapper.sh
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 04:54 queuedata.json
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas       100 Jul 27 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:44:02] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 10:14 run_atlas
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas       105 Jul 27 10:14 job.xml
[2025-07-27 12:44:02] -rw-r--r-- 2 boincer umatlas 238520541 Jul 27 10:14 EVNT.45759700._000001.pool.root.1
[2025-07-27 12:44:02] -rw-r--r-- 2 boincer umatlas    542878 Jul 27 10:14 input.tar.gz
[2025-07-27 12:44:02] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 10:14 start_atlas.sh
[2025-07-27 12:44:02] drwxrwx--x 2 boincer umatlas      4096 Jul 27 10:14 shared
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas         0 Jul 27 10:14 boinc_lockfile
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas      2564 Jul 27 10:14 pandaJob.out
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas    980109 Jul 27 10:14 agis_schedconf.cvmfs.json
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas   1593052 Jul 27 10:14 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:44:02] drwx------ 4 boincer umatlas      4096 Jul 27 10:14 pilot3
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas      5824 Jul 27 12:40 init_data.xml
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas 170935410 Jul 27 12:42 HITS.45759704._000002.pool.root.1
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas       530 Jul 27 12:43 boinc_task_state.xml
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas      1076 Jul 27 12:43 memory_monitor_summary.json
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas    331578 Jul 27 12:43 log.45759704._000002.job.log.tgz.1
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas      7834 Jul 27 12:43 heartbeat.json
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas        27 Jul 27 12:43 wrapper_checkpoint.txt
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 12:43 boinc_mmap_file
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas        95 Jul 27 12:44 pilot_heartbeat.json
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas       745 Jul 27 12:44 pilotlog.txt
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas    807705 Jul 27 12:44 log.45759704._000002.job.log.1
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas       357 Jul 27 12:44 output.list
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas       620 Jul 27 12:44 runtime_log
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas   1157120 Jul 27 12:44 result.tar.gz
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas      8655 Jul 27 12:44 runtime_log.err
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas       659 Jul 27 12:44 JWcMDm6JC07n9Rq4apOajLDm4fhM0noT9bVof3QYDm0H2KDmxs3Rhm.diag
[2025-07-27 12:44:02] -rw-r--r-- 1 boincer umatlas     21234 Jul 27 12:44 stderr.txt
[2025-07-27 12:44:02] HITS file was successfully produced:
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas 170935410 Jul 27 12:42 shared/HITS.pool.root.1
[2025-07-27 12:44:02]  *** Contents of shared directory: ***
[2025-07-27 12:44:02] total 401548
[2025-07-27 12:44:02] -rw-r--r-- 2 boincer umatlas 238520541 Jul 27 10:14 ATLAS.root_0
[2025-07-27 12:44:02] -rw-r--r-- 2 boincer umatlas    542878 Jul 27 10:14 input.tar.gz
[2025-07-27 12:44:02] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 10:14 start_atlas.sh
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas 170935410 Jul 27 12:42 HITS.pool.root.1
[2025-07-27 12:44:02] -rw------- 1 boincer umatlas   1157120 Jul 27 12:44 result.tar.gz
12:44:04 (28766): run_atlas exited; CPU time 66961.564865
12:44:04 (28766): called boinc_finish(0)

</stderr_txt>
]]>

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