Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
20:00:58 (1459783): wrapper (7.7.26015): starting
20:00:58 (1459783): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 20:00:58] Arguments: --nthreads 4
[2025-07-27 20:00:58] Threads: 4
[2025-07-27 20:00:58] Checking for CVMFS
[2025-07-27 20:00:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:00:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:00:58] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:00:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:00:58] 2.13.0.0 3104146 2546 92908 148819 0 57 2914062 4096000 2766 130560 0 7032597 99.997 84907 948 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-27 20:00:58] CVMFS is ok
[2025-07-27 20:00:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:00:58] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-27 20:00:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-27 20:00:58] Further information can be found at the LHC@home message board.
[2025-07-27 20:00:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:00:58] Checking for apptainer binary...
[2025-07-27 20:00:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:00:58] Running /usr/bin/apptainer --version
[2025-07-27 20:00:58] apptainer version 1.2.3
[2025-07-27 20:00:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:00:58] Ryzen-7-7700-Zen4-Deb12
[2025-07-27 20:00:58] apptainer works
[2025-07-27 20:00:58] Set ATHENA_PROC_NUMBER=4
[2025-07-27 20:00:58] Set ATHENA_CORE_NUMBER=4
[2025-07-27 20:00:58] Starting ATLAS job with PandaID=6746559516
[2025-07-27 20:00:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:32:25]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:32:25] 2025-07-27 19:31:31,327 | INFO     | summary of transferred files:
[2025-07-27 21:32:25] 2025-07-27 19:31:31,327 | INFO     |  -- lfn=log.45759324._000091.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 21:32:25] 2025-07-27 19:31:31,327 | INFO     | stage-out finished correctly
[2025-07-27 21:32:25] 2025-07-27 19:31:32,223 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 21:32:25] 2025-07-27 19:31:33,459 | INFO     | job 6746559516 has state=finished
[2025-07-27 21:32:25] 2025-07-27 19:31:33,460 | INFO     | preparing for final server update for job 6746559516 in state='finished'
[2025-07-27 21:32:25] 2025-07-27 19:31:33,463 | INFO     | this job has now completed (state=finished)
[2025-07-27 21:32:25] 2025-07-27 19:31:33,463 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 21:32:25] 2025-07-27 19:31:33,464 | INFO     | log transfer has been attempted: DONE
[2025-07-27 21:32:25] 2025-07-27 19:31:33,464 | INFO     | job 6746559516 has finished - writing final server update
[2025-07-27 21:32:25] 2025-07-27 19:31:33,464 | INFO     | total number of processed events: 400 (read)
[2025-07-27 21:32:25] 2025-07-27 19:31:33,464 | INFO     | executing command: lscpu
[2025-07-27 21:32:25] 2025-07-27 19:31:33,514 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 21:32:25] 2025-07-27 19:31:35,594 | WARNING  | process 1469971 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 21:32:25] 2025-07-27 19:31:35,595 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6746559516/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:32:25] 2025-07-27 19:31:35,641 | INFO     | number of running child processes to parent process 1469971: 1
[2025-07-27 21:32:25] 2025-07-27 19:31:35,641 | INFO     | maximum number of monitored processes: 6
[2025-07-27 21:32:25] 2025-07-27 19:31:38,147 | INFO     | monitor loop #406: job 0:6746559516 is in state 'finished'
[2025-07-27 21:32:25] 2025-07-27 19:31:38,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:32:25] 2025-07-27 19:31:38,915 | INFO     | PID=1463464 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 21:32:25] 2025-07-27 19:31:38,915 | INFO     | .. there are 4 such processes running
[2025-07-27 21:32:25] 2025-07-27 19:31:40,654 | INFO     | monitor loop #407: job 0:6746559516 is in state 'finished'
[2025-07-27 21:32:25] 2025-07-27 19:31:40,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:32:25] 2025-07-27 19:31:43,159 | INFO     | monitor loop #408: job 0:6746559516 is in state 'finished'
[2025-07-27 21:32:25] 2025-07-27 19:31:43,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:32:25] 2025-07-27 19:31:45,667 | INFO     | monitor loop #409: job 0:6746559516 is in state 'finished'
[2025-07-27 21:32:25] 2025-07-27 19:31:45,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:32:25] 2025-07-27 19:31:48,183 | INFO     | monitor loop #410: job 0:6746559516 is in state 'finished'
[2025-07-27 21:32:25] 2025-07-27 19:31:48,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:32:25] 2025-07-27 19:31:49,965 | INFO     | 5448s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 21:32:25] 2025-07-27 19:31:50,694 | INFO     | monitor loop #411: job 0:6746559516 is in state 'finished'
[2025-07-27 21:32:25] 2025-07-27 19:31:50,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:32:25] 2025-07-27 19:31:53,203 | INFO     | monitor loop #412: job 0:6746559516 is in state 'finished'
[2025-07-27 21:32:25] 2025-07-27 19:31:53,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:32:25] 2025-07-27 19:31:53,345 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 21:32:25] 2025-07-27 19:31:53,346 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4761.6105625
[2025-07-27 21:32:25] 2025-07-27 19:31:53,348 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6746559516/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:32:25] 2025-07-27 19:31:53,348 | INFO     | extracted standard info from prmon json
[2025-07-27 21:32:25] 2025-07-27 19:31:53,348 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:32:25] 2025-07-27 19:31:53,348 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:32:25] 2025-07-27 19:31:53,349 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:32:25] 2025-07-27 19:31:53,349 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:32:25] 2025-07-27 19:31:53,350 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:32:25] 2025-07-27 19:31:53,351 | INFO     | sum of square deviations: 170944600.5
[2025-07-27 21:32:25] 2025-07-27 19:31:53,351 | INFO     | sum of deviations: 1216747998.5
[2025-07-27 21:32:25] 2025-07-27 19:31:53,351 | INFO     | mean x: 1753642055.5
[2025-07-27 21:32:25] 2025-07-27 19:31:53,351 | INFO     | mean y: 2345405.6463414636
[2025-07-27 21:32:25] 2025-07-27 19:31:53,351 | INFO     | -- intersect: -12479712845.237406
[2025-07-27 21:32:25] 2025-07-27 19:31:53,351 | INFO     | intersect: -12479712845.237406
[2025-07-27 21:32:25] 2025-07-27 19:31:53,351 | INFO     | chi2: 0.0005036943313763094
[2025-07-27 21:32:25] 2025-07-27 19:31:53,351 | INFO     | -- intersect: -12479712845.237406
[2025-07-27 21:32:25] 2025-07-27 19:31:53,351 | INFO     | current memory leak: 7.12 B/s (using 82 data points, chi2=0.00)
[2025-07-27 21:32:25] 2025-07-27 19:31:53,355 | INFO     | could have reported an average CPU frequency of 4811 MHz (6 samples)
[2025-07-27 21:32:25] 2025-07-27 19:31:53,355 | INFO     | ..............................
[2025-07-27 21:32:25] 2025-07-27 19:31:53,355 | INFO     | . Timing measurements:
[2025-07-27 21:32:25] 2025-07-27 19:31:53,355 | INFO     | . get job = 0 s
[2025-07-27 21:32:25] 2025-07-27 19:31:53,355 | INFO     | . initial setup = 1 s
[2025-07-27 21:32:25] 2025-07-27 19:31:53,355 | INFO     | . payload setup = 2 s
[2025-07-27 21:32:25] 2025-07-27 19:31:53,356 | INFO     | . stage-in = 0 s
[2025-07-27 21:32:25] 2025-07-27 19:31:53,356 | INFO     | . payload execution = 5409 s
[2025-07-27 21:32:25] 2025-07-27 19:31:53,356 | INFO     | . stage-out = 0 s
[2025-07-27 21:32:25] 2025-07-27 19:31:53,356 | INFO     | . log creation = 0 s
[2025-07-27 21:32:25] 2025-07-27 19:31:53,356 | INFO     | ..............................
[2025-07-27 21:32:25] 2025-07-27 19:31:53,775 | INFO     | 
[2025-07-27 21:32:25] 2025-07-27 19:31:53,775 | INFO     | job summary report
[2025-07-27 21:32:25] 2025-07-27 19:31:53,775 | INFO     | --------------------------------------------------
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | PanDA job id: 6746559516
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | task id: 45759324
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | errors: (none)
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | pilot state: finished 
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | transexitcode: 0
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | exeerrorcode: 0
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | exeerrordiag: 
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | exitcode: 0
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | exitmsg: OK
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | cpuconsumptiontime: 20475 s
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | nevents: 400
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | neventsw: 0
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | pid: 1469971
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | pgrp: 1469971
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | corecount: 4
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | event service: False
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | sizes: {0: 2397476, 2: 2397738, 11: 2397766, 5416: 2433421, 5417: 2433421, 5438: 2433615}
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | --------------------------------------------------
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | 
[2025-07-27 21:32:25] 2025-07-27 19:31:53,776 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-07-27 21:32:25] 2025-07-27 19:31:53,823 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | job 6746559516 has completed (purged errors)
[2025-07-27 21:32:25] 2025-07-27 19:31:53,824 | INFO     | overall cleanup function is called
[2025-07-27 21:32:25] 2025-07-27 19:31:54,827 | INFO     | --- collectZombieJob: --- 10, [1469971]
[2025-07-27 21:32:25] 2025-07-27 19:31:54,827 | INFO     | zombie collector waiting for pid 1469971
[2025-07-27 21:32:25] 2025-07-27 19:31:54,828 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:32:25] 2025-07-27 19:31:54,828 | INFO     | collected zombie processes
[2025-07-27 21:32:25] 2025-07-27 19:31:54,828 | INFO     | will attempt to kill all subprocesses of pid=1469971
[2025-07-27 21:32:25] 2025-07-27 19:31:54,891 | INFO     | process IDs to be killed: [1469971] (in reverse order)
[2025-07-27 21:32:25] 2025-07-27 19:31:54,973 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:32:25] 2025-07-27 19:31:54,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:32:25] 2025-07-27 19:31:54,975 | INFO     | did not find any defunct processes belonging to 1469971
[2025-07-27 21:32:25] 2025-07-27 19:31:54,976 | INFO     | did not find any defunct processes belonging to 1469971
[2025-07-27 21:32:25] 2025-07-27 19:31:54,976 | INFO     | ready for new job
[2025-07-27 21:32:25] 2025-07-27 19:31:54,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:32:25] 2025-07-27 19:31:54,977 | INFO     | ***************************************
[2025-07-27 21:32:25] 2025-07-27 19:31:54,977 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:32:25] 2025-07-27 19:31:54,977 | INFO     | ***************************************
[2025-07-27 21:32:25] 2025-07-27 19:31:54,977 | INFO     | 
[2025-07-27 21:32:25] 2025-07-27 19:31:54,978 | INFO     | architecture information:
[2025-07-27 21:32:25] 2025-07-27 19:31:54,983 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:32:25] 2025-07-27 19:31:55,048 | INFO     | cat /etc/os-release:
[2025-07-27 21:32:25] NAME="CentOS Linux"
[2025-07-27 21:32:25] VERSION="7 (Core)"
[2025-07-27 21:32:25] ID="centos"
[2025-07-27 21:32:25] ID_LIKE="rhel fedora"
[2025-07-27 21:32:25] VERSION_ID="7"
[2025-07-27 21:32:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:32:25] ANSI_COLOR="0;31"
[2025-07-27 21:32:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:32:25] HOME_URL="https://www.centos.org/"
[2025-07-27 21:32:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:32:25] 
[2025-07-27 21:32:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:32:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:32:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:32:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:32:25] 
[2025-07-27 21:32:25] 2025-07-27 19:31:55,048 | INFO     | ***************************************
[2025-07-27 21:32:25] 2025-07-27 19:31:55,551 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-07-27 21:32:25] 2025-07-27 19:31:55,576 | INFO     | sufficient remaining disk space (884198080512 B)
[2025-07-27 21:32:25] 2025-07-27 19:31:55,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:32:25] 2025-07-27 19:31:55,576 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:32:25] 2025-07-27 19:31:55,576 | INFO     | update_server=False
[2025-07-27 21:32:25] 2025-07-27 19:31:55,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:32:25] 2025-07-27 19:31:55,715 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 21:32:25] 2025-07-27 19:31:55,715 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 21:32:25] 2025-07-27 19:31:55,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:32:25] 2025-07-27 19:31:55,716 | INFO     | will abort loop
[2025-07-27 21:32:25] 2025-07-27 19:31:56,171 | INFO     | all data control threads have been joined
[2025-07-27 21:32:25] 2025-07-27 19:31:56,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:32:25] 2025-07-27 19:31:56,579 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:56,619 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:56,639 | INFO     | all payload control threads have been joined
[2025-07-27 21:32:25] 2025-07-27 19:31:56,719 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:56,907 | INFO     | all job control threads have been joined
[2025-07-27 21:32:25] 2025-07-27 19:31:56,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:32:25] 2025-07-27 19:31:57,187 | INFO     | [data] control thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:57,271 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:57,435 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:57,647 | INFO     | [payload] control thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:57,651 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:57,671 | INFO     | [job] validate thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:57,739 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:57,811 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:57,915 | INFO     | [job] control thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:58,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:32:25] 2025-07-27 19:31:58,959 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:31:59,459 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:32:00,351 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:32:06,383 | INFO     | job.realtimelogging is not enabled
[2025-07-27 21:32:25] 2025-07-27 19:32:07,387 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:32:25] 2025-07-27 19:32:07,463 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140636260472640)>', '<ExcThread(monitor, started 140635482879744)>']
[2025-07-27 21:32:25] 2025-07-27 19:32:12,491 | INFO     | all workflow threads have been joined
[2025-07-27 21:32:25] 2025-07-27 19:32:12,511 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:32:25] 2025-07-27 19:32:12,511 | INFO     | traces error code: 0
[2025-07-27 21:32:25] 2025-07-27 19:32:12,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:32:25] 2025-07-27 19:32:25,141 | INFO     | PID=1463464 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 21:32:25] 2025-07-27 19:32:25,141 | INFO     | .. there are 4 such processes running
[2025-07-27 21:32:25] 2025-07-27 19:32:25,141 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:32:25] 2025-07-27 19:32:25,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:32:25] 2025-07-27 19:32:25,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:32:25] 2025-07-27 19:32:25,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:32:25] 2025-07-27 19:32:25,142 | INFO     | [monitor] control thread has ended
[2025-07-27 21:32:25] 2025-07-27 19:32:25,215 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:32:25] 2025-07-27 19:32:25,231 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:32:25] 2025-07-27 19:32:25,248 [wrapper] pilotpid: 1463464
[2025-07-27 21:32:25] 2025-07-27 19:32:25,263 [wrapper] Pilot exit status: 0
[2025-07-27 21:32:25] 2025-07-27 19:32:25,356 [wrapper] pandaids: 6746559516
[2025-07-27 21:32:25] 2025-07-27 19:32:25,393 [wrapper] cleanup supervisor_pilot 1556539 1463465
[2025-07-27 21:32:25] 2025-07-27 19:32:25,415 [wrapper] Test setup, not cleaning
[2025-07-27 21:32:25] 2025-07-27 19:32:25,423 [wrapper] apfmon messages muted
[2025-07-27 21:32:25] 2025-07-27 19:32:25,431 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:32:25] 2025-07-27 19:32:25,447 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:32:25]  *** Error codes and diagnostics ***
[2025-07-27 21:32:25]     "exeErrorCode": 0,
[2025-07-27 21:32:25]     "exeErrorDiag": "",
[2025-07-27 21:32:25]     "pilotErrorCode": 0,
[2025-07-27 21:32:25]     "pilotErrorDiag": "",
[2025-07-27 21:32:25]  *** Listing of results directory ***
[2025-07-27 21:32:25] total 407320
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc    530466 Jul 27 10:09 pilot3.tar.gz
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc      5112 Jul 27 10:13 queuedata.json
[2025-07-27 21:32:25] -rwx------ 1 boinc boinc     36292 Jul 27 10:14 runpilot2-wrapper.sh
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc       100 Jul 27 20:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:32:25] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 20:00 run_atlas
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc       105 Jul 27 20:00 job.xml
[2025-07-27 21:32:25] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:00 start_atlas.sh
[2025-07-27 21:32:25] drwxrwx--x 2 boinc boinc      4096 Jul 27 20:00 shared
[2025-07-27 21:32:25] -rw-r--r-- 2 boinc boinc    542881 Jul 27 20:00 input.tar.gz
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc      9223 Jul 27 20:00 init_data.xml
[2025-07-27 21:32:25] -rw-r--r-- 2 boinc boinc 239379597 Jul 27 20:00 EVNT.45759320._000004.pool.root.1
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc         0 Jul 27 20:00 boinc_lockfile
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc      2562 Jul 27 20:00 pandaJob.out
[2025-07-27 21:32:25] -rw------- 1 boinc boinc    980117 Jul 27 20:01 agis_schedconf.cvmfs.json
[2025-07-27 21:32:25] -rw------- 1 boinc boinc   1593052 Jul 27 20:01 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:32:25] drwx------ 4 boinc boinc      4096 Jul 27 20:01 pilot3
[2025-07-27 21:32:25] -rw------- 1 boinc boinc 172251044 Jul 27 21:31 HITS.45759324._000091.pool.root.1
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc       529 Jul 27 21:31 boinc_task_state.xml
[2025-07-27 21:32:25] -rw------- 1 boinc boinc      1017 Jul 27 21:31 memory_monitor_summary.json
[2025-07-27 21:32:25] -rw------- 1 boinc boinc    253047 Jul 27 21:31 log.45759324._000091.job.log.tgz.1
[2025-07-27 21:32:25] -rw------- 1 boinc boinc        95 Jul 27 21:31 pilot_heartbeat.json
[2025-07-27 21:32:25] -rw------- 1 boinc boinc      7738 Jul 27 21:31 heartbeat.json
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc      8192 Jul 27 21:32 boinc_mmap_file
[2025-07-27 21:32:25] -rw------- 1 boinc boinc       822 Jul 27 21:32 pilotlog.txt
[2025-07-27 21:32:25] -rw------- 1 boinc boinc    540379 Jul 27 21:32 log.45759324._000091.job.log.1
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc        27 Jul 27 21:32 wrapper_checkpoint.txt
[2025-07-27 21:32:25] -rw------- 1 boinc boinc       357 Jul 27 21:32 output.list
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc       620 Jul 27 21:32 runtime_log
[2025-07-27 21:32:25] -rw------- 1 boinc boinc    808960 Jul 27 21:32 result.tar.gz
[2025-07-27 21:32:25] -rw------- 1 boinc boinc       655 Jul 27 21:32 UWqKDmIhB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmjULDm2XtBvm.diag
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc      8783 Jul 27 21:32 runtime_log.err
[2025-07-27 21:32:25] -rw-r--r-- 1 boinc boinc     22330 Jul 27 21:32 stderr.txt
[2025-07-27 21:32:25] HITS file was successfully produced:
[2025-07-27 21:32:25] -rw------- 1 boinc boinc 172251044 Jul 27 21:31 shared/HITS.pool.root.1
[2025-07-27 21:32:25]  *** Contents of shared directory: ***
[2025-07-27 21:32:25] total 403336
[2025-07-27 21:32:25] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:00 start_atlas.sh
[2025-07-27 21:32:25] -rw-r--r-- 2 boinc boinc    542881 Jul 27 20:00 input.tar.gz
[2025-07-27 21:32:25] -rw-r--r-- 2 boinc boinc 239379597 Jul 27 20:00 ATLAS.root_0
[2025-07-27 21:32:25] -rw------- 1 boinc boinc 172251044 Jul 27 21:31 HITS.pool.root.1
[2025-07-27 21:32:25] -rw------- 1 boinc boinc    808960 Jul 27 21:32 result.tar.gz
21:32:27 (1459783): run_atlas exited; CPU time 20498.718050
21:32:27 (1459783): called boinc_finish(0)

</stderr_txt>
]]>

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