Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:45 (267774): wrapper (7.7.26015): starting
10:01:45 (267774): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 10:01:45] Arguments: --nthreads 8
[2025-07-27 10:01:45] Threads: 8
[2025-07-27 10:01:45] Checking for CVMFS
[2025-07-27 10:01:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:01:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:01:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:01:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:01:47] 2.13.1.0 682970 14239 207920 148813 1 398 28445906 40960001 21003 16776704 0 42586064 99.720 61557143 40289 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 10:01:47] CVMFS is ok
[2025-07-27 10:01:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 10:01:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 10:01:47] Further information can be found at the LHC@home message board.
[2025-07-27 10:01:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:01:47] Checking for apptainer binary...
[2025-07-27 10:01:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 10:01:47] Running /usr/bin/apptainer --version
[2025-07-27 10:01:47] apptainer version 1.4.1-1.el9
[2025-07-27 10:01:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:01:47] c-212-13.aglt2.org
[2025-07-27 10:01:47] apptainer works
[2025-07-27 10:01:48] Set ATHENA_PROC_NUMBER=8
[2025-07-27 10:01:48] Set ATHENA_CORE_NUMBER=8
[2025-07-27 10:01:48] Starting ATLAS job with PandaID=6746627260
[2025-07-27 10:01:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:54:59]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:54:59] 2025-07-27 17:54:23,700 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:54:59] 2025-07-27 17:54:23,708 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:54:59] 2025-07-27 17:54:23,709 | INFO     | sum of square deviations: 3627089287.7180543
[2025-07-27 13:54:59] 2025-07-27 17:54:23,711 | INFO     | sum of deviations: 17560446814.030872
[2025-07-27 13:54:59] 2025-07-27 17:54:23,711 | INFO     | mean x: 1753631912.0352423
[2025-07-27 13:54:59] 2025-07-27 17:54:23,711 | INFO     | mean y: 2506357.6211453746
[2025-07-27 13:54:59] 2025-07-27 17:54:23,713 | INFO     | -- intersect: -8487651308.736226
[2025-07-27 13:54:59] 2025-07-27 17:54:23,713 | INFO     | intersect: -8487651308.736226
[2025-07-27 13:54:59] 2025-07-27 17:54:23,714 | INFO     | chi2: 2.295559712152542
[2025-07-27 13:54:59] 2025-07-27 17:54:23,714 | INFO     | sum of square deviations: 3392645577.2792816
[2025-07-27 13:54:59] 2025-07-27 17:54:23,716 | INFO     | sum of deviations: 33206169281.387375
[2025-07-27 13:54:59] 2025-07-27 17:54:23,716 | INFO     | mean x: 1753631759.5315316
[2025-07-27 13:54:59] 2025-07-27 17:54:23,716 | INFO     | mean y: 2516347.8018018017
[2025-07-27 13:54:59] 2025-07-27 17:54:23,716 | INFO     | -- intersect: -17161490837.092434
[2025-07-27 13:54:59] 2025-07-27 17:54:23,716 | INFO     | intersect: -17161490837.092434
[2025-07-27 13:54:59] 2025-07-27 17:54:23,716 | INFO     | chi2: 1.4219964837934949
[2025-07-27 13:54:59] 2025-07-27 17:54:23,718 | INFO     | current chi2=1.4219964837934949 (change=38.05447637604289 %)
[2025-07-27 13:54:59] 2025-07-27 17:54:23,719 | INFO     | sum of square deviations: 3168527763.8341103
[2025-07-27 13:54:59] 2025-07-27 17:54:23,720 | INFO     | sum of deviations: 32423746284.17512
[2025-07-27 13:54:59] 2025-07-27 17:54:23,720 | INFO     | mean x: 1753631607.0276499
[2025-07-27 13:54:59] 2025-07-27 17:54:23,720 | INFO     | mean y: 2515815.3041474656
[2025-07-27 13:54:59] 2025-07-27 17:54:23,720 | INFO     | -- intersect: -17942508038.099495
[2025-07-27 13:54:59] 2025-07-27 17:54:23,721 | INFO     | intersect: -17942508038.099495
[2025-07-27 13:54:59] 2025-07-27 17:54:23,721 | INFO     | chi2: 1.422622064575203
[2025-07-27 13:54:59] 2025-07-27 17:54:23,721 | INFO     | current chi2=1.422622064575203 (change=-0.043993131406294336 %)
[2025-07-27 13:54:59] 2025-07-27 17:54:23,721 | INFO     | right removable region: 216
[2025-07-27 13:54:59] 2025-07-27 17:54:23,721 | INFO     | sum of square deviations: 3392654545.211715
[2025-07-27 13:54:59] 2025-07-27 17:54:23,724 | INFO     | sum of deviations: -13409210177.342342
[2025-07-27 13:54:59] 2025-07-27 17:54:23,724 | INFO     | mean x: 1753632064.536036
[2025-07-27 13:54:59] 2025-07-27 17:54:23,724 | INFO     | mean y: 2526250.792792793
[2025-07-27 13:54:59] 2025-07-27 17:54:23,724 | INFO     | -- intersect: 6933624190.097738
[2025-07-27 13:54:59] 2025-07-27 17:54:23,724 | INFO     | intersect: 6933624190.097738
[2025-07-27 13:54:59] 2025-07-27 17:54:23,725 | INFO     | chi2: 0.9168004731059157
[2025-07-27 13:54:59] 2025-07-27 17:54:23,725 | INFO     | current chi2=0.9168004731059157 (change=60.062007176183045 %)
[2025-07-27 13:54:59] 2025-07-27 17:54:23,725 | INFO     | sum of square deviations: 3168545577.7050776
[2025-07-27 13:54:59] 2025-07-27 17:54:23,727 | INFO     | sum of deviations: -12698356582.142857
[2025-07-27 13:54:59] 2025-07-27 17:54:23,728 | INFO     | mean x: 1753632217.0368664
[2025-07-27 13:54:59] 2025-07-27 17:54:23,728 | INFO     | mean y: 2525735.1428571427
[2025-07-27 13:54:59] 2025-07-27 17:54:23,728 | INFO     | -- intersect: 7030433858.843059
[2025-07-27 13:54:59] 2025-07-27 17:54:23,728 | INFO     | intersect: 7030433858.843059
[2025-07-27 13:54:59] 2025-07-27 17:54:23,728 | INFO     | chi2: 0.9044933390488268
[2025-07-27 13:54:59] 2025-07-27 17:54:23,728 | INFO     | current chi2=0.9044933390488268 (change=1.3424004915044507 %)
[2025-07-27 13:54:59] 2025-07-27 17:54:23,728 | INFO     | left removable region: 20
[2025-07-27 13:54:59] 2025-07-27 17:54:23,729 | INFO     | sum of square deviations: 2334782386.8163424
[2025-07-27 13:54:59] 2025-07-27 17:54:23,730 | INFO     | sum of deviations: 2144022516.6938777
[2025-07-27 13:54:59] 2025-07-27 17:54:23,730 | INFO     | mean x: 1753632186.5306122
[2025-07-27 13:54:59] 2025-07-27 17:54:23,730 | INFO     | mean y: 2537167.551020408
[2025-07-27 13:54:59] 2025-07-27 17:54:23,730 | INFO     | -- intersect: -1607817148.6161354
[2025-07-27 13:54:59] 2025-07-27 17:54:23,730 | INFO     | intersect: -1607817148.6161354
[2025-07-27 13:54:59] 2025-07-27 17:54:23,730 | INFO     | chi2: 0.0007383390214969876
[2025-07-27 13:54:59] 2025-07-27 17:54:23,736 | INFO     | -- intersect: -1607817148.6161354
[2025-07-27 13:54:59] 2025-07-27 17:54:23,736 | INFO     | current memory leak: 0.92 B/s (using 196 data points, chi2=0.00)
[2025-07-27 13:54:59] 2025-07-27 17:54:23,737 | INFO     | could have reported an average CPU frequency of 2938 MHz (11 samples)
[2025-07-27 13:54:59] 2025-07-27 17:54:23,737 | INFO     | ..............................
[2025-07-27 13:54:59] 2025-07-27 17:54:23,737 | INFO     | . Timing measurements:
[2025-07-27 13:54:59] 2025-07-27 17:54:23,737 | INFO     | . get job = 0 s
[2025-07-27 13:54:59] 2025-07-27 17:54:23,737 | INFO     | . initial setup = 6 s
[2025-07-27 13:54:59] 2025-07-27 17:54:23,738 | INFO     | . payload setup = 27 s
[2025-07-27 13:54:59] 2025-07-27 17:54:23,738 | INFO     | . stage-in = 0 s
[2025-07-27 13:54:59] 2025-07-27 17:54:23,738 | INFO     | . payload execution = 13836 s
[2025-07-27 13:54:59] 2025-07-27 17:54:23,738 | INFO     | . stage-out = 3 s
[2025-07-27 13:54:59] 2025-07-27 17:54:23,738 | INFO     | . log creation = 0 s
[2025-07-27 13:54:59] 2025-07-27 17:54:23,738 | INFO     | ..............................
[2025-07-27 13:54:59] 2025-07-27 17:54:23,980 | INFO     | 
[2025-07-27 13:54:59] 2025-07-27 17:54:23,980 | INFO     | job summary report
[2025-07-27 13:54:59] 2025-07-27 17:54:23,980 | INFO     | --------------------------------------------------
[2025-07-27 13:54:59] 2025-07-27 17:54:23,980 | INFO     | PanDA job id: 6746627260
[2025-07-27 13:54:59] 2025-07-27 17:54:23,980 | INFO     | task id: 45743349
[2025-07-27 13:54:59] 2025-07-27 17:54:23,980 | INFO     | errors: (none)
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | pilot state: finished 
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | transexitcode: 0
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | exeerrorcode: 0
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | exeerrordiag: 
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | exitcode: 0
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | exitmsg: OK
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | cpuconsumptiontime: 43536 s
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | nevents: 400
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | neventsw: 0
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | pid: 282696
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | pgrp: 282696
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | corecount: 8
[2025-07-27 13:54:59] 2025-07-27 17:54:23,981 | INFO     | event service: False
[2025-07-27 13:54:59] 2025-07-27 17:54:23,982 | INFO     | sizes: {0: 2397195, 1: 2397450, 12: 2397450, 16: 2397740, 23: 2397768, 13867: 2428689, 13872: 2437687, 13875: 2437743, 13886: 2437937}
[2025-07-27 13:54:59] 2025-07-27 17:54:23,982 | INFO     | --------------------------------------------------
[2025-07-27 13:54:59] 2025-07-27 17:54:23,982 | INFO     | 
[2025-07-27 13:54:59] 2025-07-27 17:54:23,982 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 13:54:59] 2025-07-27 17:54:24,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,030 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,030 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,030 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,032 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,032 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,032 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:54:59] 2025-07-27 17:54:24,032 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,032 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:54:59] 2025-07-27 17:54:24,032 | INFO     | job 6746627260 has completed (purged errors)
[2025-07-27 13:54:59] 2025-07-27 17:54:24,032 | INFO     | overall cleanup function is called
[2025-07-27 13:54:59] 2025-07-27 17:54:25,041 | INFO     | --- collectZombieJob: --- 10, [282696]
[2025-07-27 13:54:59] 2025-07-27 17:54:25,041 | INFO     | zombie collector waiting for pid 282696
[2025-07-27 13:54:59] 2025-07-27 17:54:25,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:54:59] 2025-07-27 17:54:25,042 | INFO     | collected zombie processes
[2025-07-27 13:54:59] 2025-07-27 17:54:25,042 | INFO     | will attempt to kill all subprocesses of pid=282696
[2025-07-27 13:54:59] 2025-07-27 17:54:26,581 | INFO     | PID=272356 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:54:59] 2025-07-27 17:54:26,581 | INFO     | .. there are 19 such processes running
[2025-07-27 13:54:59] 2025-07-27 17:54:26,677 | INFO     | process IDs to be killed: [282696] (in reverse order)
[2025-07-27 13:54:59] 2025-07-27 17:54:26,870 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:54:59] 2025-07-27 17:54:26,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:54:59] 2025-07-27 17:54:26,900 | INFO     | did not find any defunct processes belonging to 282696
[2025-07-27 13:54:59] 2025-07-27 17:54:26,924 | INFO     | did not find any defunct processes belonging to 282696
[2025-07-27 13:54:59] 2025-07-27 17:54:26,924 | INFO     | ready for new job
[2025-07-27 13:54:59] 2025-07-27 17:54:26,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:54:59] 2025-07-27 17:54:26,926 | INFO     | ***************************************
[2025-07-27 13:54:59] 2025-07-27 17:54:26,926 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:54:59] 2025-07-27 17:54:26,926 | INFO     | ***************************************
[2025-07-27 13:54:59] 2025-07-27 17:54:26,927 | INFO     | 
[2025-07-27 13:54:59] 2025-07-27 17:54:26,932 | INFO     | architecture information:
[2025-07-27 13:54:59] 2025-07-27 17:54:26,932 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:54:59] 2025-07-27 17:54:26,964 | INFO     | cat /etc/os-release:
[2025-07-27 13:54:59] NAME="CentOS Linux"
[2025-07-27 13:54:59] VERSION="7 (Core)"
[2025-07-27 13:54:59] ID="centos"
[2025-07-27 13:54:59] ID_LIKE="rhel fedora"
[2025-07-27 13:54:59] VERSION_ID="7"
[2025-07-27 13:54:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:54:59] ANSI_COLOR="0;31"
[2025-07-27 13:54:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:54:59] HOME_URL="https://www.centos.org/"
[2025-07-27 13:54:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:54:59] 
[2025-07-27 13:54:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:54:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:54:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:54:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:54:59] 
[2025-07-27 13:54:59] 2025-07-27 17:54:26,965 | INFO     | ***************************************
[2025-07-27 13:54:59] 2025-07-27 17:54:27,473 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 13:54:59] 2025-07-27 17:54:27,573 | INFO     | sufficient remaining disk space (128919273472 B)
[2025-07-27 13:54:59] 2025-07-27 17:54:27,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:54:59] 2025-07-27 17:54:27,574 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:54:59] 2025-07-27 17:54:27,574 | INFO     | update_server=False
[2025-07-27 13:54:59] 2025-07-27 17:54:27,574 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:54:59] 2025-07-27 17:54:27,575 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 13:54:59] 2025-07-27 17:54:27,575 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:54:59] 2025-07-27 17:54:27,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:54:59] 2025-07-27 17:54:27,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:54:59] 2025-07-27 17:54:27,773 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 13:54:59] 2025-07-27 17:54:27,773 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 13:54:59] 2025-07-27 17:54:27,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:54:59] 2025-07-27 17:54:27,780 | INFO     | will abort loop
[2025-07-27 13:54:59] 2025-07-27 17:54:27,832 | INFO     | all data control threads have been joined
[2025-07-27 13:54:59] 2025-07-27 17:54:28,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:54:59] 2025-07-27 17:54:28,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:54:59] 2025-07-27 17:54:28,580 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:28,627 | INFO     | all job control threads have been joined
[2025-07-27 13:54:59] 2025-07-27 17:54:28,664 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:28,752 | INFO     | all payload control threads have been joined
[2025-07-27 13:54:59] 2025-07-27 17:54:28,785 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:28,790 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:28,838 | INFO     | [data] control thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:28,857 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:54:59] 2025-07-27 17:54:28,899 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:28,934 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:29,042 | INFO     | [job] validate thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:29,094 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:29,461 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:29,551 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:29,638 | INFO     | [job] control thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:29,758 | INFO     | [payload] control thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:29,863 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:30,268 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:32,569 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:54:59] 2025-07-27 17:54:33,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524938237760)>', '<ExcThread(monitor, started 140524056987392)>']
[2025-07-27 13:54:59] 2025-07-27 17:54:34,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:54:59] 2025-07-27 17:54:34,619 | INFO     | [monitor] control thread has ended
[2025-07-27 13:54:59] 2025-07-27 17:54:38,722 | INFO     | all workflow threads have been joined
[2025-07-27 13:54:59] 2025-07-27 17:54:38,725 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:54:59] 2025-07-27 17:54:38,725 | INFO     | traces error code: 0
[2025-07-27 13:54:59] 2025-07-27 17:54:38,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:54:59] 2025-07-27 17:54:38,955 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:54:59] 2025-07-27 17:54:38,960 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:54:59] 2025-07-27 17:54:38,968 [wrapper] pilotpid: 272356
[2025-07-27 13:54:59] 2025-07-27 17:54:38,972 [wrapper] Pilot exit status: 0
[2025-07-27 13:54:59] 2025-07-27 17:54:38,991 [wrapper] pandaids: 6746627260
[2025-07-27 13:54:59] 2025-07-27 17:54:39,367 [wrapper] cleanup supervisor_pilot 1345864 272357
[2025-07-27 13:54:59] 2025-07-27 17:54:39,370 [wrapper] Test setup, not cleaning
[2025-07-27 13:54:59] 2025-07-27 17:54:39,373 [wrapper] apfmon messages muted
[2025-07-27 13:54:59] 2025-07-27 17:54:39,376 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:54:59] 2025-07-27 17:54:39,381 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:54:59]  *** Error codes and diagnostics ***
[2025-07-27 13:54:59]     "exeErrorCode": 0,
[2025-07-27 13:54:59]     "exeErrorDiag": "",
[2025-07-27 13:54:59]     "pilotErrorCode": 0,
[2025-07-27 13:54:59]     "pilotErrorDiag": "",
[2025-07-27 13:54:59]  *** Listing of results directory ***
[2025-07-27 13:54:59] total 361384
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 04:09 pilot3.tar.gz
[2025-07-27 13:54:59] -rwx------. 1 boincer umatlas     36292 Jul 27 04:34 runpilot2-wrapper.sh
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 04:34 queuedata.json
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas       100 Jul 27 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:54:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 10:01 run_atlas
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas       105 Jul 27 10:01 job.xml
[2025-07-27 13:54:59] -rw-r--r--. 2 boincer umatlas 148463609 Jul 27 10:01 EVNT.45743347._000911.pool.root.1
[2025-07-27 13:54:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:01 start_atlas.sh
[2025-07-27 13:54:59] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 10:01 shared
[2025-07-27 13:54:59] -rw-r--r--. 2 boincer umatlas    542886 Jul 27 10:01 input.tar.gz
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas         0 Jul 27 10:01 boinc_lockfile
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas      2561 Jul 27 10:01 pandaJob.out
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas    980117 Jul 27 10:02 agis_schedconf.cvmfs.json
[2025-07-27 13:54:59] drwx------. 4 boincer umatlas      4096 Jul 27 10:02 pilot3
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas 214458612 Jul 27 13:53 HITS.45743349._046277.pool.root.1
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas       530 Jul 27 13:53 boinc_task_state.xml
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas        95 Jul 27 13:53 pilot_heartbeat.json
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas      1042 Jul 27 13:54 memory_monitor_summary.json
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas   1593052 Jul 27 13:54 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas    393195 Jul 27 13:54 log.45743349._046277.job.log.tgz.1
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas      7780 Jul 27 13:54 heartbeat.json
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas      4667 Jul 27 13:54 pilotlog.txt
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas   1233114 Jul 27 13:54 log.45743349._046277.job.log.1
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas       357 Jul 27 13:54 output.list
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas       620 Jul 27 13:54 runtime_log
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas   1648640 Jul 27 13:54 result.tar.gz
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas       659 Jul 27 13:54 TzsLDmB1B07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2mULDmCFFdjm.diag
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas      8661 Jul 27 13:54 runtime_log.err
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 13:54 init_data.xml
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 13:54 boinc_mmap_file
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas        28 Jul 27 13:54 wrapper_checkpoint.txt
[2025-07-27 13:54:59] -rw-r--r--. 1 boincer umatlas     21084 Jul 27 13:54 stderr.txt
[2025-07-27 13:54:59] HITS file was successfully produced:
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas 214458612 Jul 27 13:53 shared/HITS.pool.root.1
[2025-07-27 13:54:59]  *** Contents of shared directory: ***
[2025-07-27 13:54:59] total 356584
[2025-07-27 13:54:59] -rw-r--r--. 2 boincer umatlas 148463609 Jul 27 10:01 ATLAS.root_0
[2025-07-27 13:54:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:01 start_atlas.sh
[2025-07-27 13:54:59] -rw-r--r--. 2 boincer umatlas    542886 Jul 27 10:01 input.tar.gz
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas 214458612 Jul 27 13:53 HITS.pool.root.1
[2025-07-27 13:54:59] -rw-------. 1 boincer umatlas   1648640 Jul 27 13:54 result.tar.gz
13:55:01 (267774): run_atlas exited; CPU time 44047.294551
13:55:01 (267774): called boinc_finish(0)

</stderr_txt>
]]>

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