Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:40 (10614): wrapper (7.7.26015): starting
09:56:40 (10614): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 09:56:40] Arguments: --nthreads 12
[2025-07-27 09:56:40] Threads: 12
[2025-07-27 09:56:40] Checking for CVMFS
[2025-07-27 09:56:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:56:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:56:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:56:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:56:41] 2.11.2.0 2979 112104 90052 148813 2 57 15198632 20275201 1 130560 0 38498218 99.972 9617442 10478 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 09:56:41] CVMFS is ok
[2025-07-27 09:56:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 09:56:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 09:56:41] Further information can be found at the LHC@home message board.
[2025-07-27 09:56:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:56:41] Checking for apptainer binary...
[2025-07-27 09:56:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:56:41] Running /usr/bin/apptainer --version
[2025-07-27 09:56:41] apptainer version 1.3.2-1.el7
[2025-07-27 09:56:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:56:42] c-205-21.aglt2.org
[2025-07-27 09:56:42] apptainer works
[2025-07-27 09:56:42] Set ATHENA_PROC_NUMBER=12
[2025-07-27 09:56:42] Set ATHENA_CORE_NUMBER=12
[2025-07-27 09:56:42] Starting ATLAS job with PandaID=6746570986
[2025-07-27 09:56:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 11:23:53]  *** The last 200 lines of the pilot log: ***
[2025-07-27 11:23:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 11:23:53]  is_altstaged=None
[2025-07-27 11:23:53]  is_tar=False
[2025-07-27 11:23:53]  lfn=log.45759290._000026.job.log.tgz.1
[2025-07-27 11:23:53]  mtime=0
[2025-07-27 11:23:53]  protocol_id=None
[2025-07-27 11:23:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 11:23:53]  replicas=None
[2025-07-27 11:23:53]  scope=mc23_13p6TeV
[2025-07-27 11:23:53]  status=None
[2025-07-27 11:23:53]  status_code=0
[2025-07-27 11:23:53]  storage_token=
[2025-07-27 11:23:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746570986/log.45759290._000026.job.log.tgz.1
[2025-07-27 11:23:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/3f/log.45759290._000026.job.log.tgz.1
[2025-07-27 11:23:53]  workdir=None
[2025-07-27 11:23:53] ]
[2025-07-27 11:23:53] 2025-07-27 15:23:14,403 | INFO     | transferring file log.45759290._000026.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746570986/log.45759290._000026.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 11:23:53] 2025-07-27 15:23:14,403 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746570986/log.45759290._000026.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759290._000026.job
[2025-07-27 11:23:53] 2025-07-27 15:23:14,424 | INFO     | adding to output.list: log.45759290._000026.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/3f/log.45759290._000026.job.log.tg
[2025-07-27 11:23:53] 2025-07-27 15:23:14,425 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 11:23:53] 2025-07-27 15:23:14,425 | INFO     | summary of transferred files:
[2025-07-27 11:23:53] 2025-07-27 15:23:14,425 | INFO     |  -- lfn=log.45759290._000026.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 11:23:53] 2025-07-27 15:23:14,426 | INFO     | stage-out finished correctly
[2025-07-27 11:23:53] 2025-07-27 15:23:15,976 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 11:23:53] 2025-07-27 15:23:16,650 | INFO     | job 6746570986 has state=finished
[2025-07-27 11:23:53] 2025-07-27 15:23:16,651 | INFO     | preparing for final server update for job 6746570986 in state='finished'
[2025-07-27 11:23:53] 2025-07-27 15:23:16,651 | INFO     | this job has now completed (state=finished)
[2025-07-27 11:23:53] 2025-07-27 15:23:16,651 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 11:23:53] 2025-07-27 15:23:16,652 | INFO     | log transfer has been attempted: DONE
[2025-07-27 11:23:53] 2025-07-27 15:23:16,652 | INFO     | job 6746570986 has finished - writing final server update
[2025-07-27 11:23:53] 2025-07-27 15:23:16,652 | INFO     | total number of processed events: 400 (read)
[2025-07-27 11:23:53] 2025-07-27 15:23:16,653 | INFO     | executing command: lscpu
[2025-07-27 11:23:53] 2025-07-27 15:23:16,680 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 11:23:53] 2025-07-27 15:23:19,326 | WARNING  | process 21568 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 11:23:53] 2025-07-27 15:23:19,326 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746570986/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 11:23:53] 2025-07-27 15:23:19,413 | INFO     | number of running child processes to parent process 21568: 1
[2025-07-27 11:23:53] 2025-07-27 15:23:19,414 | INFO     | maximum number of monitored processes: 6
[2025-07-27 11:23:53] 2025-07-27 15:23:21,727 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 11:23:53] 2025-07-27 15:23:21,730 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-27 11:23:53] 2025-07-27 15:23:21,732 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746570986/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 11:23:53] 2025-07-27 15:23:21,732 | INFO     | extracted standard info from prmon json
[2025-07-27 11:23:53] 2025-07-27 15:23:21,733 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 11:23:53] 2025-07-27 15:23:21,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 11:23:53] 2025-07-27 15:23:21,733 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 11:23:53] 2025-07-27 15:23:21,733 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 11:23:53] 2025-07-27 15:23:21,735 | INFO     | fitting pss+swap vs Time
[2025-07-27 11:23:53] 2025-07-27 15:23:21,735 | INFO     | sum of square deviations: 147126479.5
[2025-07-27 11:23:53] 2025-07-27 15:23:21,735 | INFO     | sum of deviations: 2289671721.9999995
[2025-07-27 11:23:53] 2025-07-27 15:23:21,735 | INFO     | mean x: 1753627300.5
[2025-07-27 11:23:53] 2025-07-27 15:23:21,736 | INFO     | mean y: 2683420.641025641
[2025-07-27 11:23:53] 2025-07-27 15:23:21,736 | INFO     | -- intersect: -27288330776.990517
[2025-07-27 11:23:53] 2025-07-27 15:23:21,736 | INFO     | intersect: -27288330776.990517
[2025-07-27 11:23:53] 2025-07-27 15:23:21,736 | INFO     | chi2: 0.011659289606814477
[2025-07-27 11:23:53] 2025-07-27 15:23:21,736 | INFO     | -- intersect: -27288330776.990517
[2025-07-27 11:23:53] 2025-07-27 15:23:21,736 | INFO     | current memory leak: 15.56 B/s (using 78 data points, chi2=0.01)
[2025-07-27 11:23:53] 2025-07-27 15:23:21,736 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-07-27 11:23:53] 2025-07-27 15:23:21,737 | INFO     | ..............................
[2025-07-27 11:23:53] 2025-07-27 15:23:21,737 | INFO     | . Timing measurements:
[2025-07-27 11:23:53] 2025-07-27 15:23:21,737 | INFO     | . get job = 0 s
[2025-07-27 11:23:53] 2025-07-27 15:23:21,737 | INFO     | . initial setup = 2 s
[2025-07-27 11:23:53] 2025-07-27 15:23:21,737 | INFO     | . payload setup = 9 s
[2025-07-27 11:23:53] 2025-07-27 15:23:21,737 | INFO     | . stage-in = 0 s
[2025-07-27 11:23:53] 2025-07-27 15:23:21,737 | INFO     | . payload execution = 5147 s
[2025-07-27 11:23:53] 2025-07-27 15:23:21,737 | INFO     | . stage-out = 0 s
[2025-07-27 11:23:53] 2025-07-27 15:23:21,737 | INFO     | . log creation = 0 s
[2025-07-27 11:23:53] 2025-07-27 15:23:21,738 | INFO     | ..............................
[2025-07-27 11:23:53] 2025-07-27 15:23:21,822 | INFO     | 
[2025-07-27 11:23:53] 2025-07-27 15:23:21,822 | INFO     | job summary report
[2025-07-27 11:23:53] 2025-07-27 15:23:21,823 | INFO     | --------------------------------------------------
[2025-07-27 11:23:53] 2025-07-27 15:23:21,823 | INFO     | PanDA job id: 6746570986
[2025-07-27 11:23:53] 2025-07-27 15:23:21,823 | INFO     | task id: 45759290
[2025-07-27 11:23:53] 2025-07-27 15:23:21,823 | INFO     | errors: (none)
[2025-07-27 11:23:53] 2025-07-27 15:23:21,823 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 11:23:53] 2025-07-27 15:23:21,823 | INFO     | pilot state: finished 
[2025-07-27 11:23:53] 2025-07-27 15:23:21,824 | INFO     | transexitcode: 0
[2025-07-27 11:23:53] 2025-07-27 15:23:21,824 | INFO     | exeerrorcode: 0
[2025-07-27 11:23:53] 2025-07-27 15:23:21,824 | INFO     | exeerrordiag: 
[2025-07-27 11:23:53] 2025-07-27 15:23:21,824 | INFO     | exitcode: 0
[2025-07-27 11:23:53] 2025-07-27 15:23:21,824 | INFO     | exitmsg: OK
[2025-07-27 11:23:53] 2025-07-27 15:23:21,824 | INFO     | cpuconsumptiontime: 56649 s
[2025-07-27 11:23:53] 2025-07-27 15:23:21,825 | INFO     | nevents: 400
[2025-07-27 11:23:53] 2025-07-27 15:23:21,825 | INFO     | neventsw: 0
[2025-07-27 11:23:53] 2025-07-27 15:23:21,825 | INFO     | pid: 21568
[2025-07-27 11:23:53] 2025-07-27 15:23:21,825 | INFO     | pgrp: 21568
[2025-07-27 11:23:53] 2025-07-27 15:23:21,825 | INFO     | corecount: 12
[2025-07-27 11:23:53] 2025-07-27 15:23:21,825 | INFO     | event service: False
[2025-07-27 11:23:53] 2025-07-27 15:23:21,826 | INFO     | sizes: {0: 2397222, 1: 2397477, 6: 2397739, 12: 2397767, 5161: 2424083, 5163: 2433081, 5164: 2433265, 5170: 2433459}
[2025-07-27 11:23:53] 2025-07-27 15:23:21,826 | INFO     | --------------------------------------------------
[2025-07-27 11:23:53] 2025-07-27 15:23:21,826 | INFO     | 
[2025-07-27 11:23:53] 2025-07-27 15:23:21,826 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 11:23:53] 2025-07-27 15:23:21,851 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,851 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,852 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,852 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,852 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,853 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,853 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,853 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,853 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,854 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 11:23:53] 2025-07-27 15:23:21,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 11:23:53] 2025-07-27 15:23:21,855 | INFO     | job 6746570986 has completed (purged errors)
[2025-07-27 11:23:53] 2025-07-27 15:23:21,855 | INFO     | overall cleanup function is called
[2025-07-27 11:23:53] 2025-07-27 15:23:22,863 | INFO     | --- collectZombieJob: --- 10, [21568]
[2025-07-27 11:23:53] 2025-07-27 15:23:22,863 | INFO     | zombie collector waiting for pid 21568
[2025-07-27 11:23:53] 2025-07-27 15:23:22,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 11:23:53] 2025-07-27 15:23:22,863 | INFO     | collected zombie processes
[2025-07-27 11:23:53] 2025-07-27 15:23:22,863 | INFO     | will attempt to kill all subprocesses of pid=21568
[2025-07-27 11:23:53] 2025-07-27 15:23:22,955 | INFO     | process IDs to be killed: [21568] (in reverse order)
[2025-07-27 11:23:53] 2025-07-27 15:23:23,005 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 11:23:53] 2025-07-27 15:23:23,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 11:23:53] 2025-07-27 15:23:23,009 | INFO     | did not find any defunct processes belonging to 21568
[2025-07-27 11:23:53] 2025-07-27 15:23:23,011 | INFO     | did not find any defunct processes belonging to 21568
[2025-07-27 11:23:53] 2025-07-27 15:23:23,012 | INFO     | ready for new job
[2025-07-27 11:23:53] 2025-07-27 15:23:23,012 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 11:23:53] 2025-07-27 15:23:23,013 | INFO     | ***************************************
[2025-07-27 11:23:53] 2025-07-27 15:23:23,013 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 11:23:53] 2025-07-27 15:23:23,013 | INFO     | ***************************************
[2025-07-27 11:23:53] 2025-07-27 15:23:23,013 | INFO     | 
[2025-07-27 11:23:53] 2025-07-27 15:23:23,014 | INFO     | architecture information:
[2025-07-27 11:23:53] 2025-07-27 15:23:23,014 | INFO     | executing command: cat /etc/os-release
[2025-07-27 11:23:53] 2025-07-27 15:23:23,029 | INFO     | cat /etc/os-release:
[2025-07-27 11:23:53] NAME="CentOS Linux"
[2025-07-27 11:23:53] VERSION="7 (Core)"
[2025-07-27 11:23:53] ID="centos"
[2025-07-27 11:23:53] ID_LIKE="rhel fedora"
[2025-07-27 11:23:53] VERSION_ID="7"
[2025-07-27 11:23:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 11:23:53] ANSI_COLOR="0;31"
[2025-07-27 11:23:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 11:23:53] HOME_URL="https://www.centos.org/"
[2025-07-27 11:23:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 11:23:53] 
[2025-07-27 11:23:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 11:23:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 11:23:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 11:23:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 11:23:53] 
[2025-07-27 11:23:53] 2025-07-27 15:23:23,029 | INFO     | ***************************************
[2025-07-27 11:23:53] 2025-07-27 15:23:23,532 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 11:23:53] 2025-07-27 15:23:23,548 | INFO     | sufficient remaining disk space (29350690816 B)
[2025-07-27 11:23:53] 2025-07-27 15:23:23,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 11:23:53] 2025-07-27 15:23:23,549 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 11:23:53] 2025-07-27 15:23:23,549 | INFO     | update_server=False
[2025-07-27 11:23:53] 2025-07-27 15:23:23,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 11:23:53] 2025-07-27 15:23:23,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:23:53] 2025-07-27 15:23:23,549 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:23:53] 2025-07-27 15:23:23,550 | INFO     | aborting loop
[2025-07-27 11:23:53] 2025-07-27 15:23:24,007 | INFO     | all data control threads have been joined
[2025-07-27 11:23:53] 2025-07-27 15:23:24,542 | INFO     | all payload control threads have been joined
[2025-07-27 11:23:53] 2025-07-27 15:23:24,554 | INFO     | [job] retrieve thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:24,555 | INFO     | [job] job monitor thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:24,555 | INFO     | [job] queue monitor thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:24,723 | INFO     | [payload] validate_post thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:24,840 | INFO     | [data] copytool_in thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:24,848 | INFO     | [payload] failed_post thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:24,902 | INFO     | all job control threads have been joined
[2025-07-27 11:23:53] 2025-07-27 15:23:25,013 | INFO     | [data] control thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:25,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 11:23:53] 2025-07-27 15:23:25,457 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:25,548 | INFO     | [payload] control thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:25,581 | INFO     | [job] validate thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:25,822 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:25,874 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:25,907 | INFO     | [job] control thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:26,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 11:23:53] 2025-07-27 15:23:27,034 | INFO     | [data] copytool_out thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:30,570 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:33,828 | INFO     | job.realtimelogging is not enabled
[2025-07-27 11:23:53] 2025-07-27 15:23:34,834 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 11:23:53] 2025-07-27 15:23:36,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015577274176)>', '<ExcThread(monitor, started 140014373558016)>']
[2025-07-27 11:23:53] 2025-07-27 15:23:41,673 | INFO     | all workflow threads have been joined
[2025-07-27 11:23:53] 2025-07-27 15:23:41,673 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 11:23:53] 2025-07-27 15:23:41,680 | INFO     | traces error code: 0
[2025-07-27 11:23:53] 2025-07-27 15:23:41,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 11:23:53] 2025-07-27 15:23:53,376 | INFO     | PID=14778 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 11:23:53] 2025-07-27 15:23:53,377 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 11:23:53] 2025-07-27 15:23:53,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 11:23:53] 2025-07-27 15:23:53,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 11:23:53] 2025-07-27 15:23:53,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 11:23:53] 2025-07-27 15:23:53,377 | INFO     | [monitor] control thread has ended
[2025-07-27 11:23:53] 2025-07-27 15:23:53,460 [wrapper] ==== pilot stdout END ====
[2025-07-27 11:23:53] 2025-07-27 15:23:53,464 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 11:23:53] 2025-07-27 15:23:53,468 [wrapper] pilotpid: 14778
[2025-07-27 11:23:53] 2025-07-27 15:23:53,471 [wrapper] Pilot exit status: 0
[2025-07-27 11:23:53] 2025-07-27 15:23:53,486 [wrapper] pandaids: 6746570986
[2025-07-27 11:23:53] 2025-07-27 15:23:53,524 [wrapper] cleanup supervisor_pilot 15272 14779
[2025-07-27 11:23:53] 2025-07-27 15:23:53,528 [wrapper] Test setup, not cleaning
[2025-07-27 11:23:53] 2025-07-27 15:23:53,533 [wrapper] apfmon messages muted
[2025-07-27 11:23:53] 2025-07-27 15:23:53,537 [wrapper] ==== wrapper stdout END ====
[2025-07-27 11:23:53] 2025-07-27 15:23:53,541 [wrapper] ==== wrapper stderr END ====
[2025-07-27 11:23:53]  *** Error codes and diagnostics ***
[2025-07-27 11:23:53]     "exeErrorCode": 0,
[2025-07-27 11:23:53]     "exeErrorDiag": "",
[2025-07-27 11:23:53]     "pilotErrorCode": 0,
[2025-07-27 11:23:53]     "pilotErrorDiag": "",
[2025-07-27 11:23:53]  *** Listing of results directory ***
[2025-07-27 11:23:53] total 418264
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 04:09 pilot3.tar.gz
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 04:19 queuedata.json
[2025-07-27 11:23:53] -rwx------ 1 boincer umatlas     36292 Jul 27 04:20 runpilot2-wrapper.sh
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas       100 Jul 27 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 11:23:53] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 09:56 run_atlas
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas       105 Jul 27 09:56 job.xml
[2025-07-27 11:23:53] -rw-r--r-- 2 boincer umatlas 245880117 Jul 27 09:56 EVNT.45759282._000004.pool.root.1
[2025-07-27 11:23:53] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 09:56 start_atlas.sh
[2025-07-27 11:23:53] drwxrwx--x 2 boincer umatlas      4096 Jul 27 09:56 shared
[2025-07-27 11:23:53] -rw-r--r-- 2 boincer umatlas    542881 Jul 27 09:56 input.tar.gz
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas         0 Jul 27 09:56 boinc_lockfile
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas      2549 Jul 27 09:56 pandaJob.out
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas    980117 Jul 27 09:56 agis_schedconf.cvmfs.json
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas   1593052 Jul 27 09:56 agis_ddmendpoints.agis.ALL.json
[2025-07-27 11:23:53] drwx------ 4 boincer umatlas      4096 Jul 27 09:56 pilot3
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 11:19 init_data.xml
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas       530 Jul 27 11:22 boinc_task_state.xml
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas 176858447 Jul 27 11:22 HITS.45759290._000026.pool.root.1
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas        95 Jul 27 11:23 pilot_heartbeat.json
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas      1049 Jul 27 11:23 memory_monitor_summary.json
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas    354096 Jul 27 11:23 log.45759290._000026.job.log.tgz.1
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas      7832 Jul 27 11:23 heartbeat.json
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 11:23 boinc_mmap_file
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas        27 Jul 27 11:23 wrapper_checkpoint.txt
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas       745 Jul 27 11:23 pilotlog.txt
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas    490023 Jul 27 11:23 log.45759290._000026.job.log.1
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas       357 Jul 27 11:23 output.list
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas       620 Jul 27 11:23 runtime_log
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas    860160 Jul 27 11:23 result.tar.gz
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 11:23 runtime_log.err
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas       659 Jul 27 11:23 OFDMDmKnB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVlULDmxHj23n.diag
[2025-07-27 11:23:53] -rw-r--r-- 1 boincer umatlas     21432 Jul 27 11:23 stderr.txt
[2025-07-27 11:23:53] HITS file was successfully produced:
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas 176858447 Jul 27 11:22 shared/HITS.pool.root.1
[2025-07-27 11:23:53]  *** Contents of shared directory: ***
[2025-07-27 11:23:53] total 414232
[2025-07-27 11:23:53] -rw-r--r-- 2 boincer umatlas 245880117 Jul 27 09:56 ATLAS.root_0
[2025-07-27 11:23:53] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 09:56 start_atlas.sh
[2025-07-27 11:23:53] -rw-r--r-- 2 boincer umatlas    542881 Jul 27 09:56 input.tar.gz
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas 176858447 Jul 27 11:22 HITS.pool.root.1
[2025-07-27 11:23:53] -rw------- 1 boincer umatlas    860160 Jul 27 11:23 result.tar.gz
11:23:55 (10614): run_atlas exited; CPU time 56617.848535
11:23:55 (10614): called boinc_finish(0)

</stderr_txt>
]]>

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