Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:47:09 (3671802): wrapper (7.7.26015): starting
09:47:09 (3671802): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 09:47:09] Arguments: --nthreads 8
[2025-07-27 09:47:09] Threads: 8
[2025-07-27 09:47:09] Checking for CVMFS
[2025-07-27 09:47:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:47:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:47:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:47:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:47:10] 2.12.6.0 2059728 18442 362168 148813 2 489 27041798 32935937 21649 16776704 0 59663684 99.696 81784300 22278 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 09:47:10] CVMFS is ok
[2025-07-27 09:47:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 09:47:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 09:47:10] Further information can be found at the LHC@home message board.
[2025-07-27 09:47:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:47:10] Checking for apptainer binary...
[2025-07-27 09:47:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:47:10] Running /usr/bin/apptainer --version
[2025-07-27 09:47:10] apptainer version 1.4.1-1.el9
[2025-07-27 09:47:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:47:11] c6-12-29-1.aglt2.org
[2025-07-27 09:47:11] apptainer works
[2025-07-27 09:47:11] Set ATHENA_PROC_NUMBER=8
[2025-07-27 09:47:11] Set ATHENA_CORE_NUMBER=8
[2025-07-27 09:47:11] Starting ATLAS job with PandaID=6746563226
[2025-07-27 09:47:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:06:36]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:06:36] 2025-07-27 17:05:59,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:06:36] 2025-07-27 17:06:02,440 | INFO     | monitor loop #756: job 0:6746563226 is in state 'finished'
[2025-07-27 13:06:36] 2025-07-27 17:06:02,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:06:36] 2025-07-27 17:06:03,106 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 13:06:36] 2025-07-27 17:06:03,115 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2437.8025208333333
[2025-07-27 13:06:36] 2025-07-27 17:06:03,170 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6746563226/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:06:36] 2025-07-27 17:06:03,171 | INFO     | extracted standard info from prmon json
[2025-07-27 13:06:36] 2025-07-27 17:06:03,171 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:06:36] 2025-07-27 17:06:03,171 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:06:36] 2025-07-27 17:06:03,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:06:36] 2025-07-27 17:06:03,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:06:36] 2025-07-27 17:06:03,178 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:06:36] 2025-07-27 17:06:03,179 | INFO     | sum of square deviations: 2263985215.628863
[2025-07-27 13:06:36] 2025-07-27 17:06:03,180 | INFO     | sum of deviations: 27817237226.78351
[2025-07-27 13:06:36] 2025-07-27 17:06:03,181 | INFO     | mean x: 1753630007.5670104
[2025-07-27 13:06:36] 2025-07-27 17:06:03,181 | INFO     | mean y: 2143902.7474226803
[2025-07-27 13:06:36] 2025-07-27 17:06:03,181 | INFO     | -- intersect: -21544437581.86172
[2025-07-27 13:06:36] 2025-07-27 17:06:03,181 | INFO     | intersect: -21544437581.86172
[2025-07-27 13:06:36] 2025-07-27 17:06:03,181 | INFO     | chi2: 1.8497091192353823
[2025-07-27 13:06:36] 2025-07-27 17:06:03,182 | INFO     | sum of square deviations: 2093409238.1058202
[2025-07-27 13:06:36] 2025-07-27 17:06:03,183 | INFO     | sum of deviations: 25408377601.619022
[2025-07-27 13:06:36] 2025-07-27 17:06:03,183 | INFO     | mean x: 1753629855.068783
[2025-07-27 13:06:36] 2025-07-27 17:06:03,183 | INFO     | mean y: 2141760.9523809524
[2025-07-27 13:06:36] 2025-07-27 17:06:03,183 | INFO     | -- intersect: -21282224773.79001
[2025-07-27 13:06:36] 2025-07-27 17:06:03,183 | INFO     | intersect: -21282224773.79001
[2025-07-27 13:06:36] 2025-07-27 17:06:03,184 | INFO     | chi2: 1.8408488950872917
[2025-07-27 13:06:36] 2025-07-27 17:06:03,184 | INFO     | current chi2=1.8408488950872917 (change=0.47900635056355184 %)
[2025-07-27 13:06:36] 2025-07-27 17:06:03,184 | INFO     | right removable region: 188
[2025-07-27 13:06:36] 2025-07-27 17:06:03,184 | INFO     | sum of square deviations: 2093401308.1058202
[2025-07-27 13:06:36] 2025-07-27 17:06:03,186 | INFO     | sum of deviations: -1280490508.523808
[2025-07-27 13:06:36] 2025-07-27 17:06:03,186 | INFO     | mean x: 1753630160.068783
[2025-07-27 13:06:36] 2025-07-27 17:06:03,186 | INFO     | mean y: 2169703.8095238097
[2025-07-27 13:06:36] 2025-07-27 17:06:03,186 | INFO     | -- intersect: 1074829191.8562627
[2025-07-27 13:06:36] 2025-07-27 17:06:03,186 | INFO     | intersect: 1074829191.8562627
[2025-07-27 13:06:36] 2025-07-27 17:06:03,186 | INFO     | chi2: 0.3081524710716453
[2025-07-27 13:06:36] 2025-07-27 17:06:03,186 | INFO     | current chi2=0.3081524710716453 (change=83.3404902496763 %)
[2025-07-27 13:06:36] 2025-07-27 17:06:03,187 | INFO     | sum of square deviations: 1931608263.0815268
[2025-07-27 13:06:36] 2025-07-27 17:06:03,188 | INFO     | sum of deviations: 955677349.7228229
[2025-07-27 13:06:36] 2025-07-27 17:06:03,188 | INFO     | mean x: 1753630312.5706522
[2025-07-27 13:06:36] 2025-07-27 17:06:03,188 | INFO     | mean y: 2167536.059782609
[2025-07-27 13:06:36] 2025-07-27 17:06:03,188 | INFO     | -- intersect: -865453917.8045366
[2025-07-27 13:06:36] 2025-07-27 17:06:03,188 | INFO     | intersect: -865453917.8045366
[2025-07-27 13:06:36] 2025-07-27 17:06:03,189 | INFO     | chi2: 0.2707295132032656
[2025-07-27 13:06:36] 2025-07-27 17:06:03,189 | INFO     | current chi2=0.2707295132032656 (change=12.144299131607115 %)
[2025-07-27 13:06:36] 2025-07-27 17:06:03,189 | INFO     | left removable region: 20
[2025-07-27 13:06:36] 2025-07-27 17:06:03,189 | INFO     | sum of square deviations: 1470246351.2797632
[2025-07-27 13:06:36] 2025-07-27 17:06:03,190 | INFO     | sum of deviations: 10334479523.29762
[2025-07-27 13:06:36] 2025-07-27 17:06:03,191 | INFO     | mean x: 1753630434.5654762
[2025-07-27 13:06:36] 2025-07-27 17:06:03,191 | INFO     | mean y: 2153392.154761905
[2025-07-27 13:06:36] 2025-07-27 17:06:03,191 | INFO     | -- intersect: -12324255581.194185
[2025-07-27 13:06:36] 2025-07-27 17:06:03,191 | INFO     | intersect: -12324255581.194185
[2025-07-27 13:06:36] 2025-07-27 17:06:03,191 | INFO     | chi2: 0.06509957247365901
[2025-07-27 13:06:36] 2025-07-27 17:06:03,191 | INFO     | -- intersect: -12324255581.194185
[2025-07-27 13:06:36] 2025-07-27 17:06:03,191 | INFO     | current memory leak: 7.03 B/s (using 168 data points, chi2=0.07)
[2025-07-27 13:06:36] 2025-07-27 17:06:03,192 | INFO     | could have reported an average CPU frequency of 2456 MHz (10 samples)
[2025-07-27 13:06:36] 2025-07-27 17:06:03,194 | INFO     | ..............................
[2025-07-27 13:06:36] 2025-07-27 17:06:03,194 | INFO     | . Timing measurements:
[2025-07-27 13:06:36] 2025-07-27 17:06:03,195 | INFO     | . get job = 0 s
[2025-07-27 13:06:36] 2025-07-27 17:06:03,195 | INFO     | . initial setup = 3 s
[2025-07-27 13:06:36] 2025-07-27 17:06:03,195 | INFO     | . payload setup = 18 s
[2025-07-27 13:06:36] 2025-07-27 17:06:03,195 | INFO     | . stage-in = 0 s
[2025-07-27 13:06:36] 2025-07-27 17:06:03,195 | INFO     | . payload execution = 11821 s
[2025-07-27 13:06:36] 2025-07-27 17:06:03,195 | INFO     | . stage-out = 4 s
[2025-07-27 13:06:36] 2025-07-27 17:06:03,195 | INFO     | . log creation = 0 s
[2025-07-27 13:06:36] 2025-07-27 17:06:03,195 | INFO     | ..............................
[2025-07-27 13:06:36] 2025-07-27 17:06:03,624 | INFO     | 
[2025-07-27 13:06:36] 2025-07-27 17:06:03,625 | INFO     | job summary report
[2025-07-27 13:06:36] 2025-07-27 17:06:03,625 | INFO     | --------------------------------------------------
[2025-07-27 13:06:36] 2025-07-27 17:06:03,625 | INFO     | PanDA job id: 6746563226
[2025-07-27 13:06:36] 2025-07-27 17:06:03,625 | INFO     | task id: 45758991
[2025-07-27 13:06:36] 2025-07-27 17:06:03,625 | INFO     | errors: (none)
[2025-07-27 13:06:36] 2025-07-27 17:06:03,625 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:06:36] 2025-07-27 17:06:03,625 | INFO     | pilot state: finished 
[2025-07-27 13:06:36] 2025-07-27 17:06:03,625 | INFO     | transexitcode: 0
[2025-07-27 13:06:36] 2025-07-27 17:06:03,625 | INFO     | exeerrorcode: 0
[2025-07-27 13:06:36] 2025-07-27 17:06:03,625 | INFO     | exeerrordiag: 
[2025-07-27 13:06:36] 2025-07-27 17:06:03,625 | INFO     | exitcode: 0
[2025-07-27 13:06:36] 2025-07-27 17:06:03,626 | INFO     | exitmsg: OK
[2025-07-27 13:06:36] 2025-07-27 17:06:03,626 | INFO     | cpuconsumptiontime: 67158 s
[2025-07-27 13:06:36] 2025-07-27 17:06:03,626 | INFO     | nevents: 400
[2025-07-27 13:06:36] 2025-07-27 17:06:03,626 | INFO     | neventsw: 0
[2025-07-27 13:06:36] 2025-07-27 17:06:03,626 | INFO     | pid: 3689535
[2025-07-27 13:06:36] 2025-07-27 17:06:03,626 | INFO     | pgrp: 3689535
[2025-07-27 13:06:36] 2025-07-27 17:06:03,626 | INFO     | corecount: 8
[2025-07-27 13:06:36] 2025-07-27 17:06:03,626 | INFO     | event service: False
[2025-07-27 13:06:36] 2025-07-27 17:06:03,626 | INFO     | sizes: {0: 2396633, 1: 2397489, 2: 2397489, 13: 2397517, 14: 2397835, 23: 2397863, 11844: 2427415, 11850: 2436469, 11873: 2436607}
[2025-07-27 13:06:36] 2025-07-27 17:06:03,626 | INFO     | --------------------------------------------------
[2025-07-27 13:06:36] 2025-07-27 17:06:03,626 | INFO     | 
[2025-07-27 13:06:36] 2025-07-27 17:06:03,627 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 13:06:36] 2025-07-27 17:06:03,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:06:36] 2025-07-27 17:06:03,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:06:36] 2025-07-27 17:06:03,698 | INFO     | job 6746563226 has completed (purged errors)
[2025-07-27 13:06:36] 2025-07-27 17:06:03,698 | INFO     | overall cleanup function is called
[2025-07-27 13:06:36] 2025-07-27 17:06:04,722 | INFO     | --- collectZombieJob: --- 10, [3689535]
[2025-07-27 13:06:36] 2025-07-27 17:06:04,723 | INFO     | zombie collector waiting for pid 3689535
[2025-07-27 13:06:36] 2025-07-27 17:06:04,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:06:36] 2025-07-27 17:06:04,723 | INFO     | collected zombie processes
[2025-07-27 13:06:36] 2025-07-27 17:06:04,723 | INFO     | will attempt to kill all subprocesses of pid=3689535
[2025-07-27 13:06:36] 2025-07-27 17:06:05,574 | INFO     | process IDs to be killed: [3689535] (in reverse order)
[2025-07-27 13:06:36] 2025-07-27 17:06:05,975 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:06:36] 2025-07-27 17:06:05,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:06:36] 2025-07-27 17:06:06,060 | INFO     | did not find any defunct processes belonging to 3689535
[2025-07-27 13:06:36] 2025-07-27 17:06:06,101 | INFO     | did not find any defunct processes belonging to 3689535
[2025-07-27 13:06:36] 2025-07-27 17:06:06,102 | INFO     | ready for new job
[2025-07-27 13:06:36] 2025-07-27 17:06:06,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:06:36] 2025-07-27 17:06:06,106 | INFO     | ***************************************
[2025-07-27 13:06:36] 2025-07-27 17:06:06,106 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:06:36] 2025-07-27 17:06:06,106 | INFO     | ***************************************
[2025-07-27 13:06:36] 2025-07-27 17:06:06,106 | INFO     | 
[2025-07-27 13:06:36] 2025-07-27 17:06:06,133 | INFO     | architecture information:
[2025-07-27 13:06:36] 2025-07-27 17:06:06,137 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:06:36] 2025-07-27 17:06:06,193 | INFO     | cat /etc/os-release:
[2025-07-27 13:06:36] NAME="CentOS Linux"
[2025-07-27 13:06:36] VERSION="7 (Core)"
[2025-07-27 13:06:36] ID="centos"
[2025-07-27 13:06:36] ID_LIKE="rhel fedora"
[2025-07-27 13:06:36] VERSION_ID="7"
[2025-07-27 13:06:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:06:36] ANSI_COLOR="0;31"
[2025-07-27 13:06:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:06:36] HOME_URL="https://www.centos.org/"
[2025-07-27 13:06:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:06:36] 
[2025-07-27 13:06:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:06:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:06:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:06:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:06:36] 
[2025-07-27 13:06:36] 2025-07-27 17:06:06,193 | INFO     | ***************************************
[2025-07-27 13:06:36] 2025-07-27 17:06:06,697 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 13:06:36] 2025-07-27 17:06:06,786 | INFO     | sufficient remaining disk space (95386861568 B)
[2025-07-27 13:06:36] 2025-07-27 17:06:06,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:06:36] 2025-07-27 17:06:06,786 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:06:36] 2025-07-27 17:06:06,787 | INFO     | update_server=False
[2025-07-27 13:06:36] 2025-07-27 17:06:06,787 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:06:36] 2025-07-27 17:06:06,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:06:36] 2025-07-27 17:06:06,788 | INFO     | aborting loop
[2025-07-27 13:06:36] 2025-07-27 17:06:06,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:06:36] 2025-07-27 17:06:06,892 | INFO     | all data control threads have been joined
[2025-07-27 13:06:36] 2025-07-27 17:06:07,713 | INFO     | all job control threads have been joined
[2025-07-27 13:06:36] 2025-07-27 17:06:07,729 | INFO     | all payload control threads have been joined
[2025-07-27 13:06:36] 2025-07-27 17:06:07,794 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:07,794 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:07,899 | INFO     | [data] control thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:08,226 | INFO     | [job] validate thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:08,293 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:08,363 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:08,435 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:08,527 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:08,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:06:36] 2025-07-27 17:06:08,719 | INFO     | [job] control thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:08,735 | INFO     | [payload] control thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:08,773 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:08,794 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:09,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:09,323 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:09,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:06:36] 2025-07-27 17:06:09,603 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:13,510 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:06:36] 2025-07-27 17:06:14,829 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139909447259968)>', '<ExcThread(monitor, started 139908819707648)>']
[2025-07-27 13:06:36] 2025-07-27 17:06:19,855 | INFO     | all workflow threads have been joined
[2025-07-27 13:06:36] 2025-07-27 17:06:19,856 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:06:36] 2025-07-27 17:06:19,856 | INFO     | traces error code: 0
[2025-07-27 13:06:36] 2025-07-27 17:06:19,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:06:36] 2025-07-27 17:06:35,815 | INFO     | PID=3680425 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:06:36] 2025-07-27 17:06:35,815 | INFO     | .. there are 25 such processes running
[2025-07-27 13:06:36] 2025-07-27 17:06:35,816 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:06:36] 2025-07-27 17:06:35,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:06:36] 2025-07-27 17:06:35,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:06:36] 2025-07-27 17:06:35,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:06:36] 2025-07-27 17:06:35,816 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 13:06:36] 2025-07-27 17:06:35,817 | INFO     | [monitor] control thread has ended
[2025-07-27 13:06:36] 2025-07-27 17:06:36,130 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:06:36] 2025-07-27 17:06:36,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:06:36] 2025-07-27 17:06:36,188 [wrapper] pilotpid: 3680425
[2025-07-27 13:06:36] 2025-07-27 17:06:36,198 [wrapper] Pilot exit status: 0
[2025-07-27 13:06:36] 2025-07-27 17:06:36,355 [wrapper] pandaids: 6746563226
[2025-07-27 13:06:36] 2025-07-27 17:06:36,577 [wrapper] cleanup supervisor_pilot  266629 3680426
[2025-07-27 13:06:36] 2025-07-27 17:06:36,582 [wrapper] Test setup, not cleaning
[2025-07-27 13:06:36] 2025-07-27 17:06:36,585 [wrapper] apfmon messages muted
[2025-07-27 13:06:36] 2025-07-27 17:06:36,588 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:06:36] 2025-07-27 17:06:36,591 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:06:36]  *** Error codes and diagnostics ***
[2025-07-27 13:06:36]     "exeErrorCode": 0,
[2025-07-27 13:06:36]     "exeErrorDiag": "",
[2025-07-27 13:06:36]     "pilotErrorCode": 0,
[2025-07-27 13:06:36]     "pilotErrorDiag": "",
[2025-07-27 13:06:36]  *** Listing of results directory ***
[2025-07-27 13:06:36] total 407128
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 04:09 pilot3.tar.gz
[2025-07-27 13:06:36] -rwx------. 1 boincer umatlas     36292 Jul 27 04:16 runpilot2-wrapper.sh
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 04:16 queuedata.json
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas       100 Jul 27 09:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:06:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 09:47 run_atlas
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas       105 Jul 27 09:47 job.xml
[2025-07-27 13:06:36] -rw-r--r--. 2 boincer umatlas 236450755 Jul 27 09:47 EVNT.45758987._000008.pool.root.1
[2025-07-27 13:06:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:47 start_atlas.sh
[2025-07-27 13:06:36] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 09:47 shared
[2025-07-27 13:06:36] -rw-r--r--. 2 boincer umatlas    542874 Jul 27 09:47 input.tar.gz
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas         0 Jul 27 09:47 boinc_lockfile
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas      2554 Jul 27 09:47 pandaJob.out
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas    980117 Jul 27 09:47 agis_schedconf.cvmfs.json
[2025-07-27 13:06:36] drwx------. 4 boincer umatlas      4096 Jul 27 09:47 pilot3
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas      6860 Jul 27 13:03 init_data.xml
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas 173799836 Jul 27 13:04 HITS.45758991._000071.pool.root.1
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas       531 Jul 27 13:05 boinc_task_state.xml
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas      1044 Jul 27 13:05 memory_monitor_summary.json
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas   1593052 Jul 27 13:05 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas    383662 Jul 27 13:05 log.45758991._000071.job.log.tgz.1
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas      7823 Jul 27 13:06 heartbeat.json
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas        28 Jul 27 13:06 wrapper_checkpoint.txt
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 13:06 boinc_mmap_file
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas        95 Jul 27 13:06 pilot_heartbeat.json
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas       893 Jul 27 13:06 pilotlog.txt
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas   1003727 Jul 27 13:06 log.45758991._000071.job.log.1
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas       357 Jul 27 13:06 output.list
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas       620 Jul 27 13:06 runtime_log
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas   1402880 Jul 27 13:06 result.tar.gz
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas       657 Jul 27 13:06 xHSMDmFjB07n9Rq4apOajLDm4fhM0noT9bVof3QYDmjF2KDmu2RW3m.diag
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas      8671 Jul 27 13:06 runtime_log.err
[2025-07-27 13:06:36] -rw-r--r--. 1 boincer umatlas     21244 Jul 27 13:06 stderr.txt
[2025-07-27 13:06:36] HITS file was successfully produced:
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas 173799836 Jul 27 13:04 shared/HITS.pool.root.1
[2025-07-27 13:06:36]  *** Contents of shared directory: ***
[2025-07-27 13:06:36] total 402564
[2025-07-27 13:06:36] -rw-r--r--. 2 boincer umatlas 236450755 Jul 27 09:47 ATLAS.root_0
[2025-07-27 13:06:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:47 start_atlas.sh
[2025-07-27 13:06:36] -rw-r--r--. 2 boincer umatlas    542874 Jul 27 09:47 input.tar.gz
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas 173799836 Jul 27 13:04 HITS.pool.root.1
[2025-07-27 13:06:36] -rw-------. 1 boincer umatlas   1402880 Jul 27 13:06 result.tar.gz
13:06:38 (3671802): run_atlas exited; CPU time 67710.387838
13:06:38 (3671802): called boinc_finish(0)

</stderr_txt>
]]>

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