Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:19:48 (618810): wrapper (7.7.26015): starting
06:19:48 (618810): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 06:19:48] Arguments: --nthreads 4
[2025-07-28 06:19:48] Threads: 4
[2025-07-28 06:19:48] Checking for CVMFS
[2025-07-28 06:19:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 06:19:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 06:19:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 06:19:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 06:19:48] 2.9.2.0 3292553 5029 94052 148836 2 56 18443598 36864000 0 130560 0 3983987 99.991 180407 1577 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 06:19:48] CVMFS is ok
[2025-07-28 06:19:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 06:19:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 06:19:48] Further information can be found at the LHC@home message board.
[2025-07-28 06:19:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 06:19:48] Checking for apptainer binary...
[2025-07-28 06:19:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 06:19:48] Running /usr/bin/apptainer --version
[2025-07-28 06:19:48] apptainer version 1.4.1-1.1
[2025-07-28 06:19:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 06:19:48] magicA254
[2025-07-28 06:19:48] apptainer works
[2025-07-28 06:19:48] Set ATHENA_PROC_NUMBER=4
[2025-07-28 06:19:48] Set ATHENA_CORE_NUMBER=4
[2025-07-28 06:19:48] Starting ATLAS job with PandaID=6746559467
[2025-07-28 06:19:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 07:46:05]  *** The last 200 lines of the pilot log: ***
[2025-07-28 07:46:05]  lfn=log.45759324._000042.job.log.tgz.1
[2025-07-28 07:46:05]  mtime=0
[2025-07-28 07:46:05]  protocol_id=None
[2025-07-28 07:46:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 07:46:05]  replicas=None
[2025-07-28 07:46:05]  scope=mc23_13p6TeV
[2025-07-28 07:46:05]  status=None
[2025-07-28 07:46:05]  status_code=0
[2025-07-28 07:46:05]  storage_token=
[2025-07-28 07:46:05]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6746559467/log.45759324._000042.job.log.tgz.1
[2025-07-28 07:46:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/a3/log.45759324._000042.job.log.tgz.1
[2025-07-28 07:46:05]  workdir=None
[2025-07-28 07:46:05] ]
[2025-07-28 07:46:05] 2025-07-28 05:45:26,445 | INFO     | transferring file log.45759324._000042.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6746559467/log.45759324._000042.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 07:46:05] 2025-07-28 05:45:26,446 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6746559467/log.45759324._000042.job.log.tgz.1 /local/data/boinc/slots/0/log.45759324._0000
[2025-07-28 07:46:05] 2025-07-28 05:45:26,464 | INFO     | adding to output.list: log.45759324._000042.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/a3/log.45759324._000042.job.log.tg
[2025-07-28 07:46:05] 2025-07-28 05:45:26,465 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 07:46:05] 2025-07-28 05:45:26,465 | INFO     | summary of transferred files:
[2025-07-28 07:46:05] 2025-07-28 05:45:26,465 | INFO     |  -- lfn=log.45759324._000042.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 07:46:05] 2025-07-28 05:45:26,465 | INFO     | stage-out finished correctly
[2025-07-28 07:46:05] 2025-07-28 05:45:27,219 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 07:46:05] 2025-07-28 05:45:27,316 | INFO     | PID=622508 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 07:46:05] 2025-07-28 05:45:27,829 | INFO     | monitor loop #396: job 0:6746559467 is in state 'finished'
[2025-07-28 07:46:05] 2025-07-28 05:45:27,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 07:46:05] 2025-07-28 05:45:29,425 | INFO     | job 6746559467 has state=finished
[2025-07-28 07:46:05] 2025-07-28 05:45:29,425 | INFO     | preparing for final server update for job 6746559467 in state='finished'
[2025-07-28 07:46:05] 2025-07-28 05:45:29,426 | INFO     | this job has now completed (state=finished)
[2025-07-28 07:46:05] 2025-07-28 05:45:29,426 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 07:46:05] 2025-07-28 05:45:29,426 | INFO     | log transfer has been attempted: DONE
[2025-07-28 07:46:05] 2025-07-28 05:45:29,426 | INFO     | job 6746559467 has finished - writing final server update
[2025-07-28 07:46:05] 2025-07-28 05:45:29,426 | INFO     | total number of processed events: 400 (read)
[2025-07-28 07:46:05] 2025-07-28 05:45:29,426 | INFO     | executing command: lscpu
[2025-07-28 07:46:05] 2025-07-28 05:45:29,446 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 07:46:05] 2025-07-28 05:45:30,332 | INFO     | monitor loop #397: job 0:6746559467 is in state 'finished'
[2025-07-28 07:46:05] 2025-07-28 05:45:30,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 07:46:05] 2025-07-28 05:45:32,835 | INFO     | monitor loop #398: job 0:6746559467 is in state 'finished'
[2025-07-28 07:46:05] 2025-07-28 05:45:32,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 07:46:05] 2025-07-28 05:45:34,198 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 07:46:05] 2025-07-28 05:45:34,200 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3317.4221875
[2025-07-28 07:46:05] 2025-07-28 05:45:34,202 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6746559467/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 07:46:05] 2025-07-28 05:45:34,202 | INFO     | extracted standard info from prmon json
[2025-07-28 07:46:05] 2025-07-28 05:45:34,202 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 07:46:05] 2025-07-28 05:45:34,202 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 07:46:05] 2025-07-28 05:45:34,202 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 07:46:05] 2025-07-28 05:45:34,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 07:46:05] 2025-07-28 05:45:34,203 | INFO     | fitting pss+swap vs Time
[2025-07-28 07:46:05] 2025-07-28 05:45:34,203 | INFO     | sum of square deviations: 141539398.0
[2025-07-28 07:46:05] 2025-07-28 05:45:34,203 | INFO     | sum of deviations: -11413234749.0
[2025-07-28 07:46:05] 2025-07-28 05:45:34,203 | INFO     | mean x: 1753679043.0
[2025-07-28 07:46:05] 2025-07-28 05:45:34,203 | INFO     | mean y: 2560438.064935065
[2025-07-28 07:46:05] 2025-07-28 05:45:34,203 | INFO     | -- intersect: 141413014876.76947
[2025-07-28 07:46:05] 2025-07-28 05:45:34,203 | INFO     | intersect: 141413014876.76947
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | chi2: 0.046648300084197125
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | -- intersect: 141413014876.76947
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | current memory leak: -80.64 B/s (using 77 data points, chi2=0.05)
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | could have reported an average CPU frequency of 3724 MHz (6 samples)
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | ..............................
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | . Timing measurements:
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | . get job = 0 s
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | . initial setup = 1 s
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | . payload setup = 5 s
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | . stage-in = 0 s
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | . payload execution = 5106 s
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | . stage-out = 0 s
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | . log creation = 0 s
[2025-07-28 07:46:05] 2025-07-28 05:45:34,204 | INFO     | ..............................
[2025-07-28 07:46:05] 2025-07-28 05:45:34,247 | INFO     | 
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | job summary report
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | --------------------------------------------------
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | PanDA job id: 6746559467
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | task id: 45759324
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | errors: (none)
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | pilot state: finished 
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | transexitcode: 0
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | exeerrorcode: 0
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | exeerrordiag: 
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | exitcode: 0
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | exitmsg: OK
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | cpuconsumptiontime: 19397 s
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | nevents: 400
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | neventsw: 0
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | pid: 629161
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | pgrp: 629161
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | corecount: 4
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | event service: False
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | sizes: {0: 2397472, 4: 2397734, 11: 2397762, 5115: 2424227, 5116: 2433286, 5117: 2433286, 5124: 2433608}
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | --------------------------------------------------
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | 
[2025-07-28 07:46:05] 2025-07-28 05:45:34,248 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 07:46:05] 2025-07-28 05:45:34,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,266 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,266 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,266 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,266 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,266 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,266 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | job 6746559467 has completed (purged errors)
[2025-07-28 07:46:05] 2025-07-28 05:45:34,267 | INFO     | overall cleanup function is called
[2025-07-28 07:46:05] 2025-07-28 05:45:35,274 | INFO     | --- collectZombieJob: --- 10, [629161]
[2025-07-28 07:46:05] 2025-07-28 05:45:35,274 | INFO     | zombie collector waiting for pid 629161
[2025-07-28 07:46:05] 2025-07-28 05:45:35,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 07:46:05] 2025-07-28 05:45:35,275 | INFO     | collected zombie processes
[2025-07-28 07:46:05] 2025-07-28 05:45:35,275 | INFO     | will attempt to kill all subprocesses of pid=629161
[2025-07-28 07:46:05] 2025-07-28 05:45:35,320 | INFO     | process IDs to be killed: [629161] (in reverse order)
[2025-07-28 07:46:05] 2025-07-28 05:45:35,354 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 07:46:05] 2025-07-28 05:45:35,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 07:46:05] 2025-07-28 05:45:35,356 | INFO     | did not find any defunct processes belonging to 629161
[2025-07-28 07:46:05] 2025-07-28 05:45:35,357 | INFO     | did not find any defunct processes belonging to 629161
[2025-07-28 07:46:05] 2025-07-28 05:45:35,357 | INFO     | ready for new job
[2025-07-28 07:46:05] 2025-07-28 05:45:35,357 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 07:46:05] 2025-07-28 05:45:35,358 | INFO     | ***************************************
[2025-07-28 07:46:05] 2025-07-28 05:45:35,358 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 07:46:05] 2025-07-28 05:45:35,358 | INFO     | ***************************************
[2025-07-28 07:46:05] 2025-07-28 05:45:35,358 | INFO     | 
[2025-07-28 07:46:05] 2025-07-28 05:45:35,359 | INFO     | architecture information:
[2025-07-28 07:46:05] 2025-07-28 05:45:35,359 | INFO     | executing command: cat /etc/os-release
[2025-07-28 07:46:05] 2025-07-28 05:45:35,373 | INFO     | cat /etc/os-release:
[2025-07-28 07:46:05] NAME="CentOS Linux"
[2025-07-28 07:46:05] VERSION="7 (Core)"
[2025-07-28 07:46:05] ID="centos"
[2025-07-28 07:46:05] ID_LIKE="rhel fedora"
[2025-07-28 07:46:05] VERSION_ID="7"
[2025-07-28 07:46:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 07:46:05] ANSI_COLOR="0;31"
[2025-07-28 07:46:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 07:46:05] HOME_URL="https://www.centos.org/"
[2025-07-28 07:46:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 07:46:05] 
[2025-07-28 07:46:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 07:46:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 07:46:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 07:46:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 07:46:05] 
[2025-07-28 07:46:05] 2025-07-28 05:45:35,373 | INFO     | ***************************************
[2025-07-28 07:46:05] 2025-07-28 05:45:35,876 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 07:46:05] 2025-07-28 05:45:35,894 | INFO     | sufficient remaining disk space (337248256000 B)
[2025-07-28 07:46:05] 2025-07-28 05:45:35,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 07:46:05] 2025-07-28 05:45:35,894 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 07:46:05] 2025-07-28 05:45:35,894 | INFO     | update_server=False
[2025-07-28 07:46:05] 2025-07-28 05:45:35,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 07:46:05] 2025-07-28 05:45:35,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 07:46:05] 2025-07-28 05:45:36,149 | INFO     | all payload control threads have been joined
[2025-07-28 07:46:05] 2025-07-28 05:45:36,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 07:46:05] 2025-07-28 05:45:36,343 | INFO     | aborting loop
[2025-07-28 07:46:05] 2025-07-28 05:45:36,418 | INFO     | all job control threads have been joined
[2025-07-28 07:46:05] 2025-07-28 05:45:36,533 | INFO     | all data control threads have been joined
[2025-07-28 07:46:05] 2025-07-28 05:45:36,900 | INFO     | [job] queue monitor thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:36,900 | INFO     | [job] retrieve thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:36,989 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:37,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 07:46:05] 2025-07-28 05:45:37,155 | INFO     | [payload] control thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:37,216 | INFO     | [data] copytool_in thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:37,349 | INFO     | [job] job monitor thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:37,424 | INFO     | [job] control thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:37,538 | INFO     | [data] control thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:37,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 07:46:05] 2025-07-28 05:45:38,016 | INFO     | [job] validate thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:38,130 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:38,210 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:38,263 | INFO     | [payload] failed_post thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:38,311 | INFO     | [payload] validate_post thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:39,023 | INFO     | [data] copytool_out thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:41,778 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:46,731 | INFO     | job.realtimelogging is not enabled
[2025-07-28 07:46:05] 2025-07-28 05:45:47,737 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 07:46:05] 2025-07-28 05:45:48,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047688980288)>', '<ExcThread(monitor, started 140046527096576)>']
[2025-07-28 07:46:05] 2025-07-28 05:45:53,795 | INFO     | all workflow threads have been joined
[2025-07-28 07:46:05] 2025-07-28 05:45:53,796 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 07:46:05] 2025-07-28 05:45:53,796 | INFO     | traces error code: 0
[2025-07-28 07:46:05] 2025-07-28 05:45:53,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 07:46:05] 2025-07-28 05:46:05,451 | INFO     | PID=622508 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 07:46:05] 2025-07-28 05:46:05,452 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 07:46:05] 2025-07-28 05:46:05,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 07:46:05] 2025-07-28 05:46:05,452 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 07:46:05] 2025-07-28 05:46:05,452 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 07:46:05] 2025-07-28 05:46:05,452 | INFO     | [monitor] control thread has ended
[2025-07-28 07:46:05] 2025-07-28 05:46:05,528 [wrapper] ==== pilot stdout END ====
[2025-07-28 07:46:05] 2025-07-28 05:46:05,532 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 07:46:05] 2025-07-28 05:46:05,536 [wrapper] pilotpid: 622508
[2025-07-28 07:46:05] 2025-07-28 05:46:05,540 [wrapper] Pilot exit status: 0
[2025-07-28 07:46:05] 2025-07-28 05:46:05,552 [wrapper] pandaids: 6746559467
[2025-07-28 07:46:05] 2025-07-28 05:46:05,575 [wrapper] cleanup supervisor_pilot  641424 622509
[2025-07-28 07:46:05] 2025-07-28 05:46:05,579 [wrapper] Test setup, not cleaning
[2025-07-28 07:46:05] 2025-07-28 05:46:05,583 [wrapper] apfmon messages muted
[2025-07-28 07:46:05] 2025-07-28 05:46:05,587 [wrapper] ==== wrapper stdout END ====
[2025-07-28 07:46:05] 2025-07-28 05:46:05,591 [wrapper] ==== wrapper stderr END ====
[2025-07-28 07:46:05]  *** Error codes and diagnostics ***
[2025-07-28 07:46:05]     "exeErrorCode": 0,
[2025-07-28 07:46:05]     "exeErrorDiag": "",
[2025-07-28 07:46:05]     "pilotErrorCode": 0,
[2025-07-28 07:46:05]     "pilotErrorDiag": "",
[2025-07-28 07:46:05]  *** Listing of results directory ***
[2025-07-28 07:46:05] total 421112
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc    530466 Jul 27 10:09 pilot3.tar.gz
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc      5112 Jul 27 10:13 queuedata.json
[2025-07-28 07:46:05] -rwx------ 1 boinc boinc     36292 Jul 27 10:14 runpilot2-wrapper.sh
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc       100 Jul 28 06:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 07:46:05] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 06:19 run_atlas
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc       105 Jul 28 06:19 job.xml
[2025-07-28 07:46:05] -rw-r--r-- 2 boinc boinc 245381156 Jul 28 06:19 EVNT.45759320._000002.pool.root.1
[2025-07-28 07:46:05] -rw-r--r-- 2 boinc boinc    542879 Jul 28 06:19 input.tar.gz
[2025-07-28 07:46:05] -rw-r--r-- 2 boinc boinc     15095 Jul 28 06:19 start_atlas.sh
[2025-07-28 07:46:05] drwxrwx--x 2 boinc boinc      4096 Jul 28 06:19 shared
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc         0 Jul 28 06:19 boinc_setup_complete
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc      6457 Jul 28 06:19 init_data.xml
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc         0 Jul 28 06:19 boinc_lockfile
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc      2562 Jul 28 06:19 pandaJob.out
[2025-07-28 07:46:05] -rw------- 1 boinc boinc    980125 Jul 28 06:19 agis_schedconf.cvmfs.json
[2025-07-28 07:46:05] -rw------- 1 boinc boinc   1593052 Jul 28 06:19 agis_ddmendpoints.agis.ALL.json
[2025-07-28 07:46:05] drwx------ 4 boinc boinc      4096 Jul 28 06:19 pilot3
[2025-07-28 07:46:05] -rw------- 1 boinc boinc 180454545 Jul 28 07:45 HITS.45759324._000042.pool.root.1
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc       530 Jul 28 07:45 boinc_task_state.xml
[2025-07-28 07:46:05] -rw------- 1 boinc boinc      1025 Jul 28 07:45 memory_monitor_summary.json
[2025-07-28 07:46:05] -rw------- 1 boinc boinc        95 Jul 28 07:45 pilot_heartbeat.json
[2025-07-28 07:46:05] -rw------- 1 boinc boinc    254058 Jul 28 07:45 log.45759324._000042.job.log.tgz.1
[2025-07-28 07:46:05] -rw------- 1 boinc boinc      7760 Jul 28 07:45 heartbeat.json
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc      8192 Jul 28 07:45 boinc_mmap_file
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc        27 Jul 28 07:45 wrapper_checkpoint.txt
[2025-07-28 07:46:05] -rw------- 1 boinc boinc       746 Jul 28 07:46 pilotlog.txt
[2025-07-28 07:46:05] -rw------- 1 boinc boinc    496880 Jul 28 07:46 log.45759324._000042.job.log.1
[2025-07-28 07:46:05] -rw------- 1 boinc boinc       357 Jul 28 07:46 output.list
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc       620 Jul 28 07:46 runtime_log
[2025-07-28 07:46:05] -rw------- 1 boinc boinc    768000 Jul 28 07:46 result.tar.gz
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc      8749 Jul 28 07:46 runtime_log.err
[2025-07-28 07:46:05] -rw------- 1 boinc boinc       661 Jul 28 07:46 dYbKDmIhB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZjULDmbgBC1m.diag
[2025-07-28 07:46:05] -rw-r--r-- 1 boinc boinc     21746 Jul 28 07:46 stderr.txt
[2025-07-28 07:46:05] HITS file was successfully produced:
[2025-07-28 07:46:05] -rw------- 1 boinc boinc 180454545 Jul 28 07:45 shared/HITS.pool.root.1
[2025-07-28 07:46:05]  *** Contents of shared directory: ***
[2025-07-28 07:46:05] total 417168
[2025-07-28 07:46:05] -rw-r--r-- 2 boinc boinc 245381156 Jul 28 06:19 ATLAS.root_0
[2025-07-28 07:46:05] -rw-r--r-- 2 boinc boinc    542879 Jul 28 06:19 input.tar.gz
[2025-07-28 07:46:05] -rw-r--r-- 2 boinc boinc     15095 Jul 28 06:19 start_atlas.sh
[2025-07-28 07:46:05] -rw------- 1 boinc boinc 180454545 Jul 28 07:45 HITS.pool.root.1
[2025-07-28 07:46:05] -rw------- 1 boinc boinc    768000 Jul 28 07:46 result.tar.gz
07:46:07 (618810): run_atlas exited; CPU time 19411.611986
07:46:07 (618810): called boinc_finish(0)

</stderr_txt>
]]>

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