Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:31:08 (3538655): wrapper (7.7.26015): starting
21:31:08 (3538655): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 21:31:08] Arguments: --nthreads 12
[2025-07-27 21:31:08] Threads: 12
[2025-07-27 21:31:08] Checking for CVMFS
[2025-07-27 21:31:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 21:31:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 21:31:08] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 21:31:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 21:31:08] 2.13.1.0 659355 8549 108660 148822 3 57 2464321 4097024 0 130560 0 7191374 99.991 309163 8235 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-27 21:31:08] CVMFS is ok
[2025-07-27 21:31:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 21:31:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 21:31:08] Further information can be found at the LHC@home message board.
[2025-07-27 21:31:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 21:31:08] Checking for apptainer binary...
[2025-07-27 21:31:08] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-27 21:31:08] apptainer is not installed, using version from CVMFS
[2025-07-27 21:31:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 21:31:08] pckelar8.cern.ch
[2025-07-27 21:31:08] apptainer works
[2025-07-27 21:31:08] Set ATHENA_PROC_NUMBER=12
[2025-07-27 21:31:08] Set ATHENA_CORE_NUMBER=12
[2025-07-27 21:31:08] Starting ATLAS job with PandaID=6746590544
[2025-07-27 21:31:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:52:48]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:52:48]  is_altstaged=None
[2025-07-27 22:52:48]  is_tar=False
[2025-07-27 22:52:48]  lfn=log.45759399._000032.job.log.tgz.1
[2025-07-27 22:52:48]  mtime=0
[2025-07-27 22:52:48]  protocol_id=None
[2025-07-27 22:52:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 22:52:48]  replicas=None
[2025-07-27 22:52:48]  scope=mc23_13p6TeV
[2025-07-27 22:52:48]  status=None
[2025-07-27 22:52:48]  status_code=0
[2025-07-27 22:52:48]  storage_token=
[2025-07-27 22:52:48]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6746590544/log.45759399._000032.job.log.tgz.1
[2025-07-27 22:52:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/b8/log.45759399._000032.job.log.tgz.1
[2025-07-27 22:52:48]  workdir=None
[2025-07-27 22:52:48] ]
[2025-07-27 22:52:48] 2025-07-27 20:52:11,043 | INFO     | transferring file log.45759399._000032.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6746590544/log.45759399._000032.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 22:52:48] 2025-07-27 20:52:11,043 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6746590544/log.45759399._000032.job.log.tgz.1 /var/lib/boinc/slots/0/log.45759399._000032.job
[2025-07-27 22:52:48] 2025-07-27 20:52:11,058 | INFO     | adding to output.list: log.45759399._000032.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/b8/log.45759399._000032.job.log.tg
[2025-07-27 22:52:48] 2025-07-27 20:52:11,058 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 22:52:48] 2025-07-27 20:52:11,058 | INFO     | summary of transferred files:
[2025-07-27 22:52:48] 2025-07-27 20:52:11,059 | INFO     |  -- lfn=log.45759399._000032.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 22:52:48] 2025-07-27 20:52:11,059 | INFO     | stage-out finished correctly
[2025-07-27 22:52:48] 2025-07-27 20:52:11,127 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 22:52:48] 2025-07-27 20:52:11,851 | INFO     | job 6746590544 has state=finished
[2025-07-27 22:52:48] 2025-07-27 20:52:11,851 | INFO     | preparing for final server update for job 6746590544 in state='finished'
[2025-07-27 22:52:48] 2025-07-27 20:52:11,852 | INFO     | this job has now completed (state=finished)
[2025-07-27 22:52:48] 2025-07-27 20:52:11,852 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 22:52:48] 2025-07-27 20:52:11,852 | INFO     | log transfer has been attempted: DONE
[2025-07-27 22:52:48] 2025-07-27 20:52:11,852 | INFO     | job 6746590544 has finished - writing final server update
[2025-07-27 22:52:48] 2025-07-27 20:52:11,852 | INFO     | total number of processed events: 400 (read)
[2025-07-27 22:52:48] 2025-07-27 20:52:11,853 | INFO     | executing command: lscpu
[2025-07-27 22:52:48] 2025-07-27 20:52:11,872 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 22:52:48] 2025-07-27 20:52:13,273 | INFO     | monitor loop #372: job 0:6746590544 is in state 'finished'
[2025-07-27 22:52:48] 2025-07-27 20:52:13,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:52:48] 2025-07-27 20:52:15,777 | INFO     | monitor loop #373: job 0:6746590544 is in state 'finished'
[2025-07-27 22:52:48] 2025-07-27 20:52:15,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:52:48] 2025-07-27 20:52:15,844 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 22:52:48] 2025-07-27 20:52:15,846 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2447.605916666667
[2025-07-27 22:52:48] 2025-07-27 20:52:15,847 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6746590544/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:52:48] 2025-07-27 20:52:15,848 | INFO     | extracted standard info from prmon json
[2025-07-27 22:52:48] 2025-07-27 20:52:15,848 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:52:48] 2025-07-27 20:52:15,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:52:48] 2025-07-27 20:52:15,848 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:52:48] 2025-07-27 20:52:15,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:52:48] 2025-07-27 20:52:15,850 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:52:48] 2025-07-27 20:52:15,850 | INFO     | sum of square deviations: 120605052.0
[2025-07-27 22:52:48] 2025-07-27 20:52:15,851 | INFO     | sum of deviations: -14173301932.000004
[2025-07-27 22:52:48] 2025-07-27 20:52:15,851 | INFO     | mean x: 1753647199.0
[2025-07-27 22:52:48] 2025-07-27 20:52:15,851 | INFO     | mean y: 2973477.6301369863
[2025-07-27 22:52:48] 2025-07-27 20:52:15,851 | INFO     | -- intersect: 206088629272.82098
[2025-07-27 22:52:48] 2025-07-27 20:52:15,851 | INFO     | intersect: 206088629272.82098
[2025-07-27 22:52:48] 2025-07-27 20:52:15,851 | INFO     | chi2: 0.13845089693599721
[2025-07-27 22:52:48] 2025-07-27 20:52:15,851 | INFO     | -- intersect: 206088629272.82098
[2025-07-27 22:52:48] 2025-07-27 20:52:15,851 | INFO     | current memory leak: -117.52 B/s (using 73 data points, chi2=0.14)
[2025-07-27 22:52:48] 2025-07-27 20:52:15,852 | INFO     | could have reported an average CPU frequency of 2487 MHz (6 samples)
[2025-07-27 22:52:48] 2025-07-27 20:52:15,852 | INFO     | ..............................
[2025-07-27 22:52:48] 2025-07-27 20:52:15,852 | INFO     | . Timing measurements:
[2025-07-27 22:52:48] 2025-07-27 20:52:15,852 | INFO     | . get job = 0 s
[2025-07-27 22:52:48] 2025-07-27 20:52:15,852 | INFO     | . initial setup = 1 s
[2025-07-27 22:52:48] 2025-07-27 20:52:15,852 | INFO     | . payload setup = 5 s
[2025-07-27 22:52:48] 2025-07-27 20:52:15,852 | INFO     | . stage-in = 0 s
[2025-07-27 22:52:48] 2025-07-27 20:52:15,852 | INFO     | . payload execution = 4830 s
[2025-07-27 22:52:48] 2025-07-27 20:52:15,852 | INFO     | . stage-out = 0 s
[2025-07-27 22:52:48] 2025-07-27 20:52:15,853 | INFO     | . log creation = 0 s
[2025-07-27 22:52:48] 2025-07-27 20:52:15,853 | INFO     | ..............................
[2025-07-27 22:52:48] 2025-07-27 20:52:16,393 | INFO     | 
[2025-07-27 22:52:48] 2025-07-27 20:52:16,393 | INFO     | job summary report
[2025-07-27 22:52:48] 2025-07-27 20:52:16,393 | INFO     | --------------------------------------------------
[2025-07-27 22:52:48] 2025-07-27 20:52:16,393 | INFO     | PanDA job id: 6746590544
[2025-07-27 22:52:48] 2025-07-27 20:52:16,393 | INFO     | task id: 45759399
[2025-07-27 22:52:48] 2025-07-27 20:52:16,393 | INFO     | errors: (none)
[2025-07-27 22:52:48] 2025-07-27 20:52:16,393 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:52:48] 2025-07-27 20:52:16,393 | INFO     | pilot state: finished 
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | transexitcode: 0
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | exeerrorcode: 0
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | exeerrordiag: 
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | exitcode: 0
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | exitmsg: OK
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | cpuconsumptiontime: 52667 s
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | nevents: 400
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | neventsw: 0
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | pid: 3549425
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | pgrp: 3549425
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | corecount: 12
[2025-07-27 22:52:48] 2025-07-27 20:52:16,394 | INFO     | event service: False
[2025-07-27 22:52:48] 2025-07-27 20:52:16,395 | INFO     | sizes: {0: 2397343, 1: 2397485, 3: 2397747, 11: 2397775, 4840: 2424092, 4842: 2433274, 4847: 2433412}
[2025-07-27 22:52:48] 2025-07-27 20:52:16,395 | INFO     | --------------------------------------------------
[2025-07-27 22:52:48] 2025-07-27 20:52:16,395 | INFO     | 
[2025-07-27 22:52:48] 2025-07-27 20:52:16,395 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 22:52:48] 2025-07-27 20:52:16,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,414 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:52:48] 2025-07-27 20:52:16,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,414 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:52:48] 2025-07-27 20:52:16,414 | INFO     | job 6746590544 has completed (purged errors)
[2025-07-27 22:52:48] 2025-07-27 20:52:16,414 | INFO     | overall cleanup function is called
[2025-07-27 22:52:48] 2025-07-27 20:52:17,422 | INFO     | --- collectZombieJob: --- 10, [3549425]
[2025-07-27 22:52:48] 2025-07-27 20:52:17,422 | INFO     | zombie collector waiting for pid 3549425
[2025-07-27 22:52:48] 2025-07-27 20:52:17,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:52:48] 2025-07-27 20:52:17,422 | INFO     | collected zombie processes
[2025-07-27 22:52:48] 2025-07-27 20:52:17,422 | INFO     | will attempt to kill all subprocesses of pid=3549425
[2025-07-27 22:52:48] 2025-07-27 20:52:17,491 | INFO     | process IDs to be killed: [3549425] (in reverse order)
[2025-07-27 22:52:48] 2025-07-27 20:52:17,522 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:52:48] 2025-07-27 20:52:17,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:52:48] 2025-07-27 20:52:17,524 | INFO     | did not find any defunct processes belonging to 3549425
[2025-07-27 22:52:48] 2025-07-27 20:52:17,526 | INFO     | did not find any defunct processes belonging to 3549425
[2025-07-27 22:52:48] 2025-07-27 20:52:17,526 | INFO     | ready for new job
[2025-07-27 22:52:48] 2025-07-27 20:52:17,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:52:48] 2025-07-27 20:52:17,527 | INFO     | ***************************************
[2025-07-27 22:52:48] 2025-07-27 20:52:17,528 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:52:48] 2025-07-27 20:52:17,528 | INFO     | ***************************************
[2025-07-27 22:52:48] 2025-07-27 20:52:17,528 | INFO     | 
[2025-07-27 22:52:48] 2025-07-27 20:52:17,528 | INFO     | architecture information:
[2025-07-27 22:52:48] 2025-07-27 20:52:17,529 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:52:48] 2025-07-27 20:52:17,539 | INFO     | cat /etc/os-release:
[2025-07-27 22:52:48] NAME="CentOS Linux"
[2025-07-27 22:52:48] VERSION="7 (Core)"
[2025-07-27 22:52:48] ID="centos"
[2025-07-27 22:52:48] ID_LIKE="rhel fedora"
[2025-07-27 22:52:48] VERSION_ID="7"
[2025-07-27 22:52:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:52:48] ANSI_COLOR="0;31"
[2025-07-27 22:52:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:52:48] HOME_URL="https://www.centos.org/"
[2025-07-27 22:52:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:52:48] 
[2025-07-27 22:52:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:52:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:52:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:52:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:52:48] 
[2025-07-27 22:52:48] 2025-07-27 20:52:17,539 | INFO     | ***************************************
[2025-07-27 22:52:48] 2025-07-27 20:52:18,042 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 22:52:48] 2025-07-27 20:52:18,057 | INFO     | sufficient remaining disk space (1717671297024 B)
[2025-07-27 22:52:48] 2025-07-27 20:52:18,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:52:48] 2025-07-27 20:52:18,057 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:52:48] 2025-07-27 20:52:18,057 | INFO     | update_server=False
[2025-07-27 22:52:48] 2025-07-27 20:52:18,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:52:48] 2025-07-27 20:52:18,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:52:48] 2025-07-27 20:52:18,199 | INFO     | all job control threads have been joined
[2025-07-27 22:52:48] 2025-07-27 20:52:18,280 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 22:52:48] 2025-07-27 20:52:18,281 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 22:52:48] 2025-07-27 20:52:18,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:52:48] 2025-07-27 20:52:18,282 | INFO     | will abort loop
[2025-07-27 22:52:48] 2025-07-27 20:52:18,812 | INFO     | all payload control threads have been joined
[2025-07-27 22:52:48] 2025-07-27 20:52:18,873 | INFO     | all data control threads have been joined
[2025-07-27 22:52:48] 2025-07-27 20:52:19,063 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:19,117 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:19,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:52:48] 2025-07-27 20:52:19,204 | INFO     | [job] control thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:19,215 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:19,280 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:19,287 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:19,621 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:19,699 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:19,818 | INFO     | [payload] control thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:19,879 | INFO     | [data] control thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:20,148 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:20,370 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:20,432 | INFO     | [job] validate thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:20,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:52:48] 2025-07-27 20:52:21,143 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:21,940 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:22,063 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:52:48] 2025-07-27 20:52:24,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140030114764608)>', '<ExcThread(monitor, started 140029137508096)>']
[2025-07-27 22:52:48] 2025-07-27 20:52:29,151 | INFO     | all workflow threads have been joined
[2025-07-27 22:52:48] 2025-07-27 20:52:29,152 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:52:48] 2025-07-27 20:52:29,152 | INFO     | traces error code: 0
[2025-07-27 22:52:48] 2025-07-27 20:52:29,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:52:48] 2025-07-27 20:52:48,072 | INFO     | PID=3542326 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 22:52:48] 2025-07-27 20:52:48,073 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:52:48] 2025-07-27 20:52:48,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:52:48] 2025-07-27 20:52:48,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:52:48] 2025-07-27 20:52:48,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:52:48] 2025-07-27 20:52:48,073 | INFO     | [monitor] control thread has ended
[2025-07-27 22:52:48] 2025-07-27 20:52:48,162 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:52:48] 2025-07-27 20:52:48,166 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:52:48] 2025-07-27 20:52:48,168 [wrapper] pilotpid: 3542326
[2025-07-27 22:52:48] 2025-07-27 20:52:48,171 [wrapper] Pilot exit status: 0
[2025-07-27 22:52:48] 2025-07-27 20:52:48,179 [wrapper] pandaids: 6746590544
[2025-07-27 22:52:48] 2025-07-27 20:52:48,197 [wrapper] cleanup supervisor_pilot 3563474 3542327
[2025-07-27 22:52:48] 2025-07-27 20:52:48,199 [wrapper] Test setup, not cleaning
[2025-07-27 22:52:48] 2025-07-27 20:52:48,201 [wrapper] apfmon messages muted
[2025-07-27 22:52:48] 2025-07-27 20:52:48,203 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:52:48] 2025-07-27 20:52:48,205 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:52:48]  *** Error codes and diagnostics ***
[2025-07-27 22:52:48]     "exeErrorCode": 0,
[2025-07-27 22:52:48]     "exeErrorDiag": "",
[2025-07-27 22:52:48]     "pilotErrorCode": 0,
[2025-07-27 22:52:48]     "pilotErrorDiag": "",
[2025-07-27 22:52:48]  *** Listing of results directory ***
[2025-07-27 22:52:48] total 411136
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc    530466 Jul 27 10:09 pilot3.tar.gz
[2025-07-27 22:52:48] -rwx------ 1 boinc boinc     36292 Jul 27 10:24 runpilot2-wrapper.sh
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc      5112 Jul 27 10:24 queuedata.json
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc       100 Jul 27 21:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:52:48] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 21:31 run_atlas
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc       105 Jul 27 21:31 job.xml
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc      6251 Jul 27 21:31 init_data.xml
[2025-07-27 22:52:48] -rw-r--r-- 2 boinc boinc 242557863 Jul 27 21:31 EVNT.45759395._000002.pool.root.1
[2025-07-27 22:52:48] -rw-r--r-- 2 boinc boinc     15095 Jul 27 21:31 start_atlas.sh
[2025-07-27 22:52:48] drwxrwx--x 2 boinc boinc      4096 Jul 27 21:31 shared
[2025-07-27 22:52:48] -rw-r--r-- 2 boinc boinc    542873 Jul 27 21:31 input.tar.gz
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc         0 Jul 27 21:31 boinc_lockfile
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc      2550 Jul 27 21:31 pandaJob.out
[2025-07-27 22:52:48] -rw------- 1 boinc boinc    980125 Jul 27 21:31 agis_schedconf.cvmfs.json
[2025-07-27 22:52:48] -rw------- 1 boinc boinc   1593052 Jul 27 21:31 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:52:48] drwx------ 4 boinc boinc      4096 Jul 27 21:31 pilot3
[2025-07-27 22:52:48] -rw------- 1 boinc boinc 172902381 Jul 27 22:51 HITS.45759399._000032.pool.root.1
[2025-07-27 22:52:48] -rw------- 1 boinc boinc        95 Jul 27 22:51 pilot_heartbeat.json
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc       530 Jul 27 22:51 boinc_task_state.xml
[2025-07-27 22:52:48] -rw------- 1 boinc boinc      1017 Jul 27 22:52 memory_monitor_summary.json
[2025-07-27 22:52:48] -rw------- 1 boinc boinc    357024 Jul 27 22:52 log.45759399._000032.job.log.tgz.1
[2025-07-27 22:52:48] -rw------- 1 boinc boinc      7780 Jul 27 22:52 heartbeat.json
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc      8192 Jul 27 22:52 boinc_mmap_file
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc        27 Jul 27 22:52 wrapper_checkpoint.txt
[2025-07-27 22:52:48] -rw------- 1 boinc boinc       747 Jul 27 22:52 pilotlog.txt
[2025-07-27 22:52:48] -rw------- 1 boinc boinc    471344 Jul 27 22:52 log.45759399._000032.job.log.1
[2025-07-27 22:52:48] -rw------- 1 boinc boinc       357 Jul 27 22:52 output.list
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc       620 Jul 27 22:52 runtime_log
[2025-07-27 22:52:48] -rw------- 1 boinc boinc    849920 Jul 27 22:52 result.tar.gz
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc      8684 Jul 27 22:52 runtime_log.err
[2025-07-27 22:52:48] -rw------- 1 boinc boinc       654 Jul 27 22:52 OD1LDm0qB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzlULDmZ2eNdn.diag
[2025-07-27 22:52:48] -rw-r--r-- 1 boinc boinc     21610 Jul 27 22:52 stderr.txt
[2025-07-27 22:52:48] HITS file was successfully produced:
[2025-07-27 22:52:48] -rw------- 1 boinc boinc 172902381 Jul 27 22:51 shared/HITS.pool.root.1
[2025-07-27 22:52:48]  *** Contents of shared directory: ***
[2025-07-27 22:52:48] total 407116
[2025-07-27 22:52:48] -rw-r--r-- 2 boinc boinc 242557863 Jul 27 21:31 ATLAS.root_0
[2025-07-27 22:52:48] -rw-r--r-- 2 boinc boinc     15095 Jul 27 21:31 start_atlas.sh
[2025-07-27 22:52:48] -rw-r--r-- 2 boinc boinc    542873 Jul 27 21:31 input.tar.gz
[2025-07-27 22:52:48] -rw------- 1 boinc boinc 172902381 Jul 27 22:51 HITS.pool.root.1
[2025-07-27 22:52:48] -rw------- 1 boinc boinc    849920 Jul 27 22:52 result.tar.gz
22:52:49 (3538655): run_atlas exited; CPU time 52690.562701
22:52:49 (3538655): called boinc_finish(0)

</stderr_txt>
]]>

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