Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
09:39:20 (91262): wrapper (7.7.26015): starting
09:39:20 (91262): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 09:39:20] Arguments: --nthreads 4
[2025-07-27 09:39:20] Threads: 4
[2025-07-27 09:39:20] Checking for CVMFS
[2025-07-27 09:39:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:39:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:39:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:39:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:39:20] 2.13.1.0 9317 8 47680 148813 3 188 1682639 4096001 3076 130560 0 217332 96.990 669220 2366 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-27 09:39:20] CVMFS is ok
[2025-07-27 09:39:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 09:39:20] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-27 09:39:20] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-27 09:39:20] Further information can be found at the LHC@home message board.
[2025-07-27 09:39:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:39:20] Checking for apptainer binary...
[2025-07-27 09:39:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:39:20] Running /usr/bin/apptainer --version
[2025-07-27 09:39:20] apptainer version 1.4.1
[2025-07-27 09:39:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:39:20] linux-7950X
[2025-07-27 09:39:20] apptainer works
[2025-07-27 09:39:20] Set ATHENA_PROC_NUMBER=4
[2025-07-27 09:39:20] Set ATHENA_CORE_NUMBER=4
[2025-07-27 09:39:20] Starting ATLAS job with PandaID=6746013617
[2025-07-27 09:39:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:03:43]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:03:43] 2025-07-27 16:03:27,484 | INFO     | executing command: lscpu
[2025-07-27 12:03:43] 2025-07-27 16:03:27,503 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 12:03:43] 2025-07-27 16:03:28,489 | INFO     | monitor loop #649: job 0:6746013617 is in state 'finished'
[2025-07-27 12:03:43] 2025-07-27 16:03:28,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:03:43] 2025-07-27 16:03:29,615 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 12:03:43] 2025-07-27 16:03:29,618 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4544.7140625
[2025-07-27 12:03:43] 2025-07-27 16:03:29,620 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6746013617/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:03:43] 2025-07-27 16:03:29,621 | INFO     | extracted standard info from prmon json
[2025-07-27 12:03:43] 2025-07-27 16:03:29,621 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:03:43] 2025-07-27 16:03:29,621 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:03:43] 2025-07-27 16:03:29,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:03:43] 2025-07-27 16:03:29,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:03:43] 2025-07-27 16:03:29,622 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:03:43] 2025-07-27 16:03:29,622 | INFO     | sum of square deviations: 887813855.5
[2025-07-27 12:03:43] 2025-07-27 16:03:29,623 | INFO     | sum of deviations: 8877175548.0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,623 | INFO     | mean x: 1753627881.5
[2025-07-27 12:03:43] 2025-07-27 16:03:29,623 | INFO     | mean y: 2290997.2253521127
[2025-07-27 12:03:43] 2025-07-27 16:03:29,623 | INFO     | -- intersect: -17532085666.873512
[2025-07-27 12:03:43] 2025-07-27 16:03:29,623 | INFO     | intersect: -17532085666.873512
[2025-07-27 12:03:43] 2025-07-27 16:03:29,623 | INFO     | chi2: 1.058627164124191
[2025-07-27 12:03:43] 2025-07-27 16:03:29,623 | INFO     | sum of square deviations: 797291228.0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,623 | INFO     | sum of deviations: 8535573596.0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,623 | INFO     | mean x: 1753627729.0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,623 | INFO     | mean y: 2290421.7591240876
[2025-07-27 12:03:43] 2025-07-27 16:03:29,623 | INFO     | -- intersect: -18771550321.997112
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | intersect: -18771550321.997112
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | chi2: 1.059671483653764
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | current chi2=1.059671483653764 (change=-0.0986484727545264 %)
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | right removable region: 136
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | sum of square deviations: 797291228.0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | sum of deviations: -2678495908.9999995
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | mean x: 1753628034.0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | mean y: 2309962.7883211677
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | -- intersect: 5893614607.8417
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | intersect: 5893614607.8417
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | chi2: 0.005272229599675165
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | current chi2=0.005272229599675165 (change=99.50197484266928 %)
[2025-07-27 12:03:43] 2025-07-27 16:03:29,624 | INFO     | sum of square deviations: 713140813.0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | sum of deviations: -2394404024.9999995
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | mean x: 1753628186.5
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | mean y: 2309442.6666666665
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | -- intersect: 5890199059.368565
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | intersect: 5890199059.368565
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | chi2: 0.00522293891789938
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | current chi2=0.00522293891789938 (change=0.9349115178675544 %)
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | left removable region: 20
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | sum of square deviations: 483971865.0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | sum of deviations: -1039581825.0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | mean x: 1753628308.5
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | mean y: 2306665.1896551726
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | -- intersect: 3769137444.334416
[2025-07-27 12:03:43] 2025-07-27 16:03:29,625 | INFO     | intersect: 3769137444.334416
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | chi2: 0.0039984374051276195
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | -- intersect: 3769137444.334416
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | current memory leak: -2.15 B/s (using 116 data points, chi2=0.00)
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | could have reported an average CPU frequency of 4608 MHz (8 samples)
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | ..............................
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | . Timing measurements:
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | . get job = 0 s
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | . initial setup = 1 s
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | . payload setup = 2 s
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | . stage-in = 0 s
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | . payload execution = 8623 s
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | . stage-out = 0 s
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | . log creation = 0 s
[2025-07-27 12:03:43] 2025-07-27 16:03:29,626 | INFO     | ..............................
[2025-07-27 12:03:43] 2025-07-27 16:03:29,671 | INFO     | 
[2025-07-27 12:03:43] 2025-07-27 16:03:29,671 | INFO     | job summary report
[2025-07-27 12:03:43] 2025-07-27 16:03:29,671 | INFO     | --------------------------------------------------
[2025-07-27 12:03:43] 2025-07-27 16:03:29,671 | INFO     | PanDA job id: 6746013617
[2025-07-27 12:03:43] 2025-07-27 16:03:29,671 | INFO     | task id: 45759981
[2025-07-27 12:03:43] 2025-07-27 16:03:29,671 | INFO     | errors: (none)
[2025-07-27 12:03:43] 2025-07-27 16:03:29,671 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | pilot state: finished 
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | transexitcode: 0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | exeerrorcode: 0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | exeerrordiag: 
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | exitcode: 0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | exitmsg: OK
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | cpuconsumptiontime: 33814 s
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | nevents: 400
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | neventsw: 0
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | pid: 130203
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | pgrp: 130203
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | corecount: 4
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | event service: False
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | sizes: {0: 2397312, 2: 2397688, 11: 2397716, 8629: 2425785, 8630: 2434853, 8632: 2434991}
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | --------------------------------------------------
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | 
[2025-07-27 12:03:43] 2025-07-27 16:03:29,672 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | job 6746013617 has completed (purged errors)
[2025-07-27 12:03:43] 2025-07-27 16:03:29,683 | INFO     | overall cleanup function is called
[2025-07-27 12:03:43] 2025-07-27 16:03:30,690 | INFO     | --- collectZombieJob: --- 10, [130203]
[2025-07-27 12:03:43] 2025-07-27 16:03:30,690 | INFO     | zombie collector waiting for pid 130203
[2025-07-27 12:03:43] 2025-07-27 16:03:30,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:03:43] 2025-07-27 16:03:30,690 | INFO     | collected zombie processes
[2025-07-27 12:03:43] 2025-07-27 16:03:30,691 | INFO     | will attempt to kill all subprocesses of pid=130203
[2025-07-27 12:03:43] 2025-07-27 16:03:30,788 | INFO     | process IDs to be killed: [130203] (in reverse order)
[2025-07-27 12:03:43] 2025-07-27 16:03:30,831 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:03:43] 2025-07-27 16:03:30,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:03:43] 2025-07-27 16:03:30,834 | INFO     | did not find any defunct processes belonging to 130203
[2025-07-27 12:03:43] 2025-07-27 16:03:30,837 | INFO     | did not find any defunct processes belonging to 130203
[2025-07-27 12:03:43] 2025-07-27 16:03:30,837 | INFO     | ready for new job
[2025-07-27 12:03:43] 2025-07-27 16:03:30,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:03:43] 2025-07-27 16:03:30,838 | INFO     | ***************************************
[2025-07-27 12:03:43] 2025-07-27 16:03:30,838 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:03:43] 2025-07-27 16:03:30,838 | INFO     | ***************************************
[2025-07-27 12:03:43] 2025-07-27 16:03:30,838 | INFO     | 
[2025-07-27 12:03:43] 2025-07-27 16:03:30,839 | INFO     | architecture information:
[2025-07-27 12:03:43] 2025-07-27 16:03:30,839 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:03:43] 2025-07-27 16:03:30,850 | INFO     | cat /etc/os-release:
[2025-07-27 12:03:43] NAME="CentOS Linux"
[2025-07-27 12:03:43] VERSION="7 (Core)"
[2025-07-27 12:03:43] ID="centos"
[2025-07-27 12:03:43] ID_LIKE="rhel fedora"
[2025-07-27 12:03:43] VERSION_ID="7"
[2025-07-27 12:03:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:03:43] ANSI_COLOR="0;31"
[2025-07-27 12:03:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:03:43] HOME_URL="https://www.centos.org/"
[2025-07-27 12:03:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:03:43] 
[2025-07-27 12:03:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:03:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:03:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:03:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:03:43] 
[2025-07-27 12:03:43] 2025-07-27 16:03:30,850 | INFO     | ***************************************
[2025-07-27 12:03:43] 2025-07-27 16:03:31,353 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-07-27 12:03:43] 2025-07-27 16:03:31,364 | INFO     | sufficient remaining disk space (899644653568 B)
[2025-07-27 12:03:43] 2025-07-27 16:03:31,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:03:43] 2025-07-27 16:03:31,364 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:03:43] 2025-07-27 16:03:31,364 | INFO     | update_server=False
[2025-07-27 12:03:43] 2025-07-27 16:03:31,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:03:43] 2025-07-27 16:03:31,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:03:43] 2025-07-27 16:03:31,364 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 12:03:43] 2025-07-27 16:03:31,364 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:03:43] 2025-07-27 16:03:31,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:03:43] 2025-07-27 16:03:31,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:03:43] 2025-07-27 16:03:31,497 | INFO     | all job control threads have been joined
[2025-07-27 12:03:43] 2025-07-27 16:03:31,941 | INFO     | all payload control threads have been joined
[2025-07-27 12:03:43] 2025-07-27 16:03:31,989 | INFO     | job.realtimelogging is not enabled
[2025-07-27 12:03:43] 2025-07-27 16:03:31,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:03:43] 2025-07-27 16:03:31,998 | INFO     | aborting loop
[2025-07-27 12:03:43] 2025-07-27 16:03:32,279 | INFO     | all data control threads have been joined
[2025-07-27 12:03:43] 2025-07-27 16:03:32,369 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:32,369 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:32,505 | INFO     | [job] control thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:32,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:03:43] 2025-07-27 16:03:32,946 | INFO     | [job] validate thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:32,947 | INFO     | [payload] control thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:32,988 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:32,994 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:32,999 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:33,003 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:33,063 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:33,091 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:33,284 | INFO     | [data] control thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:33,303 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:33,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:03:43] 2025-07-27 16:03:33,883 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:34,536 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:37,496 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:03:43] 2025-07-27 16:03:38,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130669396723520)>', '<ExcThread(monitor, started 130668466005760)>']
[2025-07-27 12:03:43] 2025-07-27 16:03:39,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:03:43] 2025-07-27 16:03:39,400 | INFO     | [monitor] control thread has ended
[2025-07-27 12:03:43] 2025-07-27 16:03:43,723 | INFO     | all workflow threads have been joined
[2025-07-27 12:03:43] 2025-07-27 16:03:43,723 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:03:43] 2025-07-27 16:03:43,724 | INFO     | traces error code: 0
[2025-07-27 12:03:43] 2025-07-27 16:03:43,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:03:43] 2025-07-27 16:03:43,787 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:03:43] 2025-07-27 16:03:43,789 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:03:43] 2025-07-27 16:03:43,791 [wrapper] pilotpid: 97210
[2025-07-27 12:03:43] 2025-07-27 16:03:43,792 [wrapper] Pilot exit status: 0
[2025-07-27 12:03:43] 2025-07-27 16:03:43,798 [wrapper] pandaids: 6746013617
[2025-07-27 12:03:43] 2025-07-27 16:03:43,826 [wrapper] cleanup supervisor_pilot  355938 97211
[2025-07-27 12:03:43] 2025-07-27 16:03:43,828 [wrapper] Test setup, not cleaning
[2025-07-27 12:03:43] 2025-07-27 16:03:43,830 [wrapper] apfmon messages muted
[2025-07-27 12:03:43] 2025-07-27 16:03:43,832 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:03:43] 2025-07-27 16:03:43,833 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:03:43]  *** Error codes and diagnostics ***
[2025-07-27 12:03:43]     "exeErrorCode": 0,
[2025-07-27 12:03:43]     "exeErrorDiag": "",
[2025-07-27 12:03:43]     "pilotErrorCode": 0,
[2025-07-27 12:03:43]     "pilotErrorDiag": "",
[2025-07-27 12:03:43]  *** Listing of results directory ***
[2025-07-27 12:03:43] total 358284
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc    530466 Jul 26 23:36 pilot3.tar.gz
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc      5112 Jul 27 00:16 queuedata.json
[2025-07-27 12:03:43] -rwx------ 1 boinc boinc     36292 Jul 27 00:18 runpilot2-wrapper.sh
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc       100 Jul 27 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:03:43] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 09:39 run_atlas
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc       105 Jul 27 09:39 job.xml
[2025-07-27 12:03:43] -rw-r--r-- 2 boinc boinc     15095 Jul 27 09:39 start_atlas.sh
[2025-07-27 12:03:43] drwxrwx--x 2 boinc boinc      4096 Jul 27 09:39 shared
[2025-07-27 12:03:43] -rw-r--r-- 2 boinc boinc    542873 Jul 27 09:39 input.tar.gz
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc      9393 Jul 27 09:39 init_data.xml
[2025-07-27 12:03:43] -rw-r--r-- 2 boinc boinc 206608776 Jul 27 09:39 EVNT.45759979._000004.pool.root.1
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc         0 Jul 27 09:39 boinc_setup_complete
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc         0 Jul 27 09:39 boinc_lockfile
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc      2560 Jul 27 09:39 pandaJob.out
[2025-07-27 12:03:43] -rw------- 1 boinc boinc    980117 Jul 27 09:39 agis_schedconf.cvmfs.json
[2025-07-27 12:03:43] -rw------- 1 boinc boinc   1593052 Jul 27 09:39 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:03:43] drwx------ 4 boinc boinc      4096 Jul 27 09:39 pilot3
[2025-07-27 12:03:43] -rw------- 1 boinc boinc        95 Jul 27 12:02 pilot_heartbeat.json
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc       529 Jul 27 12:03 boinc_task_state.xml
[2025-07-27 12:03:43] -rw------- 1 boinc boinc 154180147 Jul 27 12:03 HITS.45759981._000079.pool.root.1
[2025-07-27 12:03:43] -rw------- 1 boinc boinc      1025 Jul 27 12:03 memory_monitor_summary.json
[2025-07-27 12:03:43] -rw------- 1 boinc boinc    269996 Jul 27 12:03 log.45759981._000079.job.log.tgz.1
[2025-07-27 12:03:43] -rw------- 1 boinc boinc      7732 Jul 27 12:03 heartbeat.json
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc        27 Jul 27 12:03 wrapper_checkpoint.txt
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc      8192 Jul 27 12:03 boinc_mmap_file
[2025-07-27 12:03:43] -rw------- 1 boinc boinc      4560 Jul 27 12:03 pilotlog.txt
[2025-07-27 12:03:43] -rw------- 1 boinc boinc    832716 Jul 27 12:03 log.45759981._000079.job.log.1
[2025-07-27 12:03:43] -rw------- 1 boinc boinc       357 Jul 27 12:03 output.list
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc       620 Jul 27 12:03 runtime_log
[2025-07-27 12:03:43] -rw------- 1 boinc boinc   1126400 Jul 27 12:03 result.tar.gz
[2025-07-27 12:03:43] -rw------- 1 boinc boinc       644 Jul 27 12:03 THyLDmx07z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcu1KDmgDfuam.diag
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc      8726 Jul 27 12:03 runtime_log.err
[2025-07-27 12:03:43] -rw-r--r-- 1 boinc boinc     21160 Jul 27 12:03 stderr.txt
[2025-07-27 12:03:43] HITS file was successfully produced:
[2025-07-27 12:03:43] -rw------- 1 boinc boinc 154180147 Jul 27 12:03 shared/HITS.pool.root.1
[2025-07-27 12:03:43]  *** Contents of shared directory: ***
[2025-07-27 12:03:43] total 353992
[2025-07-27 12:03:43] -rw-r--r-- 2 boinc boinc     15095 Jul 27 09:39 start_atlas.sh
[2025-07-27 12:03:43] -rw-r--r-- 2 boinc boinc    542873 Jul 27 09:39 input.tar.gz
[2025-07-27 12:03:43] -rw-r--r-- 2 boinc boinc 206608776 Jul 27 09:39 ATLAS.root_0
[2025-07-27 12:03:43] -rw------- 1 boinc boinc 154180147 Jul 27 12:03 HITS.pool.root.1
[2025-07-27 12:03:43] -rw------- 1 boinc boinc   1126400 Jul 27 12:03 result.tar.gz
12:03:45 (91262): run_atlas exited; CPU time 33893.538592
12:03:45 (91262): called boinc_finish(0)

</stderr_txt>
]]>

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