Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:43:39 (1989234): wrapper (7.7.26015): starting
06:43:39 (1989234): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 06:43:39] Arguments: --nthreads 12
[2025-07-27 06:43:39] Threads: 12
[2025-07-27 06:43:39] Checking for CVMFS
[2025-07-27 06:43:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:43:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:43:39] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:43:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:43:39] 2.11.5.0 6468 37222 342236 148813 0 474 31610109 45568001 8405 130560 0 321375739 99.797 189446474 26647 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-27 06:43:39] CVMFS is ok
[2025-07-27 06:43:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:43:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:43:39] Further information can be found at the LHC@home message board.
[2025-07-27 06:43:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:43:39] Checking for apptainer binary...
[2025-07-27 06:43:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:43:39] Running /usr/bin/apptainer --version
[2025-07-27 06:43:39] apptainer version 1.4.1-1.el9
[2025-07-27 06:43:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:43:40] wns0074.triumf.lcg
[2025-07-27 06:43:40] apptainer works
[2025-07-27 06:43:40] Set ATHENA_PROC_NUMBER=12
[2025-07-27 06:43:40] Set ATHENA_CORE_NUMBER=12
[2025-07-27 06:43:40] Starting ATLAS job with PandaID=6747376148
[2025-07-27 06:43:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 06:46:45]  *** The last 200 lines of the pilot log: ***
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | WARNING  | found no stored workdir sizes
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | WARNING  | wrong length of table data, x=[1753623855.0], y=[1057.0] (must be same and length>=4)
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | could have reported an average CPU frequency of 2527 MHz (4 samples)
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | ..............................
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . Timing measurements:
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . get job = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . initial setup = 8 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . payload setup = 4 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . stage-in = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . payload execution = 14 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . stage-out = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . log creation = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | ..............................
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747376148/pilotlog.txt
[2025-07-27 06:46:45] 2025-07-27 13:46:31,000 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 06:46:45] - Log from pilotlog.txt -
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | WARNING  | found no stored workdir sizes
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | WARNING  | wrong length of table data, x=[1753623855.0], y=[1057.0] (must be same and length>=4)
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | could have reported an average CPU frequency of 2527 MHz (4 samples)
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | ..............................
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . Timing measurements:
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . get job = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . initial setup = 8 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . payload setup = 4 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . stage-in = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . payload execution = 14 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . stage-out = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . log creation = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | ..............................
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747376148/pilotlog.txt
[2025-07-27 06:46:45] 2025-07-27 13:46:31,000 | WARNING  | 
[2025-07-27 06:46:45] [begin log extracts]
[2025-07-27 06:46:45] - Log from pilotlog.txt -
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | WARNING  | found no stored workdir sizes
[2025-07-27 06:46:45] 2025-07-27 13:46:30,989 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | WARNING  | wrong length of table data, x=[1753623855.0], y=[1057.0] (must be same and length>=4)
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | could have reported an average CPU frequency of 2527 MHz (4 samples)
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | ..............................
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . Timing measurements:
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . get job = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . initial setup = 8 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,990 | INFO     | . payload setup = 4 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . stage-in = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . payload execution = 14 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . stage-out = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | . log creation = 0 s
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | ..............................
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 06:46:45] 2025-07-27 13:46:30,991 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747376148/pilotlog.txt
[2025-07-27 06:46:45] [end log extracts]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,000 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 06:46:45] 2025-07-27 13:46:31,001 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 06:46:45] 2025-07-27 13:46:31,056 | INFO     | 
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | job summary report
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | --------------------------------------------------
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | PanDA job id: 6747376148
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | task id: 45743349
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 06:44:21,930 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | pilot state: failed 
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | transexitcode: 65
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | exeerrorcode: 65
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | exitcode: 65
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | cpuconsumptiontime: 16 s
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | nevents: 0
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | neventsw: 0
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | pid: 2001335
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | pgrp: 2001335
[2025-07-27 06:46:45] 2025-07-27 13:46:31,057 | INFO     | corecount: 12
[2025-07-27 06:46:45] 2025-07-27 13:46:31,058 | INFO     | event service: False
[2025-07-27 06:46:45] 2025-07-27 13:46:31,058 | INFO     | sizes: {0: 2397472, 3: 2397734, 11: 2397762, 21: 2420937, 22: 2425229, 24: 2425257, 143: 2425551}
[2025-07-27 06:46:45] 2025-07-27 13:46:31,058 | INFO     | --------------------------------------------------
[2025-07-27 06:46:45] 2025-07-27 13:46:31,058 | INFO     | 
[2025-07-27 06:46:45] 2025-07-27 13:46:31,058 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,072 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 06:46:45] 2025-07-27 13:46:31,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,072 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 06:46:45] 2025-07-27 13:46:31,072 | INFO     | job 6747376148 has completed (purged errors)
[2025-07-27 06:46:45] 2025-07-27 13:46:31,072 | INFO     | overall cleanup function is called
[2025-07-27 06:46:45] 2025-07-27 13:46:32,078 | INFO     | --- collectZombieJob: --- 10, [2001335]
[2025-07-27 06:46:45] 2025-07-27 13:46:32,078 | INFO     | zombie collector waiting for pid 2001335
[2025-07-27 06:46:45] 2025-07-27 13:46:32,078 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 06:46:45] 2025-07-27 13:46:32,078 | INFO     | collected zombie processes
[2025-07-27 06:46:45] 2025-07-27 13:46:32,078 | INFO     | will attempt to kill all subprocesses of pid=2001335
[2025-07-27 06:46:45] 2025-07-27 13:46:32,204 | INFO     | process IDs to be killed: [2001335] (in reverse order)
[2025-07-27 06:46:45] 2025-07-27 13:46:32,253 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 06:46:45] 2025-07-27 13:46:32,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 06:46:45] 2025-07-27 13:46:32,259 | INFO     | did not find any defunct processes belonging to 2001335
[2025-07-27 06:46:45] 2025-07-27 13:46:32,264 | INFO     | did not find any defunct processes belonging to 2001335
[2025-07-27 06:46:45] 2025-07-27 13:46:32,265 | INFO     | ready for new job
[2025-07-27 06:46:45] 2025-07-27 13:46:32,265 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 06:46:45] 2025-07-27 13:46:32,266 | INFO     | ***************************************
[2025-07-27 06:46:45] 2025-07-27 13:46:32,266 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 06:46:45] 2025-07-27 13:46:32,266 | INFO     | ***************************************
[2025-07-27 06:46:45] 2025-07-27 13:46:32,266 | INFO     | 
[2025-07-27 06:46:45] 2025-07-27 13:46:32,268 | INFO     | architecture information:
[2025-07-27 06:46:45] 2025-07-27 13:46:32,268 | INFO     | executing command: cat /etc/os-release
[2025-07-27 06:46:45] 2025-07-27 13:46:32,277 | INFO     | cat /etc/os-release:
[2025-07-27 06:46:45] NAME="CentOS Linux"
[2025-07-27 06:46:45] VERSION="7 (Core)"
[2025-07-27 06:46:45] ID="centos"
[2025-07-27 06:46:45] ID_LIKE="rhel fedora"
[2025-07-27 06:46:45] VERSION_ID="7"
[2025-07-27 06:46:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 06:46:45] ANSI_COLOR="0;31"
[2025-07-27 06:46:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 06:46:45] HOME_URL="https://www.centos.org/"
[2025-07-27 06:46:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 06:46:45] 
[2025-07-27 06:46:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 06:46:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 06:46:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 06:46:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 06:46:45] 
[2025-07-27 06:46:45] 2025-07-27 13:46:32,278 | INFO     | ***************************************
[2025-07-27 06:46:45] 2025-07-27 13:46:32,780 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 06:46:45] 2025-07-27 13:46:32,792 | INFO     | sufficient remaining disk space (2148995694592 B)
[2025-07-27 06:46:45] 2025-07-27 13:46:32,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 06:46:45] 2025-07-27 13:46:32,792 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 06:46:45] 2025-07-27 13:46:32,792 | INFO     | update_server=False
[2025-07-27 06:46:45] 2025-07-27 13:46:32,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 06:46:45] 2025-07-27 13:46:32,793 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 06:46:45] 2025-07-27 13:46:32,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:46:45] 2025-07-27 13:46:32,793 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 06:46:45] 2025-07-27 13:46:32,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 06:46:45] 2025-07-27 13:46:32,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 06:46:45] 2025-07-27 13:46:32,936 | INFO     | all payload control threads have been joined
[2025-07-27 06:46:45] 2025-07-27 13:46:33,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 06:46:45] 2025-07-27 13:46:33,239 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 06:46:45] 2025-07-27 13:46:33,239 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 06:46:45] 2025-07-27 13:46:33,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:46:45] 2025-07-27 13:46:33,239 | INFO     | will abort loop
[2025-07-27 06:46:45] 2025-07-27 13:46:33,463 | INFO     | all data control threads have been joined
[2025-07-27 06:46:45] 2025-07-27 13:46:33,777 | INFO     | all job control threads have been joined
[2025-07-27 06:46:45] 2025-07-27 13:46:33,798 | INFO     | [job] queue monitor thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:33,798 | INFO     | [job] retrieve thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:33,942 | INFO     | [payload] control thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:34,244 | INFO     | [job] job monitor thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:34,269 | INFO     | [job] validate thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:34,410 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:34,414 | INFO     | [data] copytool_in thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:34,468 | INFO     | [data] control thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:34,502 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:34,641 | INFO     | [payload] validate_post thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:34,780 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:34,782 | INFO     | [job] control thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:34,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 06:46:45] 2025-07-27 13:46:35,095 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:35,180 | INFO     | [payload] failed_post thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:35,243 | INFO     | [data] copytool_out thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:38,998 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 06:46:45] 2025-07-27 13:46:40,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662089713472)>', '<ExcThread(monitor, started 140661546264320)>']
[2025-07-27 06:46:45] 2025-07-27 13:46:40,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 06:46:45] 2025-07-27 13:46:40,831 | INFO     | [monitor] control thread has ended
[2025-07-27 06:46:45] 2025-07-27 13:46:45,161 | INFO     | all workflow threads have been joined
[2025-07-27 06:46:45] 2025-07-27 13:46:45,161 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 06:46:45] 2025-07-27 13:46:45,161 | INFO     | traces error code: 0
[2025-07-27 06:46:45] 2025-07-27 13:46:45,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 06:46:45] 2025-07-27 13:46:45,321 [wrapper] ==== pilot stdout END ====
[2025-07-27 06:46:45] 2025-07-27 13:46:45,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 06:46:45] 2025-07-27 13:46:45,324 [wrapper] pilotpid: 1992813
[2025-07-27 06:46:45] 2025-07-27 13:46:45,326 [wrapper] Pilot exit status: 0
[2025-07-27 06:46:45] 2025-07-27 13:46:45,332 [wrapper] pandaids: 6747376148
[2025-07-27 06:46:45] 2025-07-27 13:46:45,364 [wrapper] cleanup supervisor_pilot 1992819 1992814
[2025-07-27 06:46:45] 2025-07-27 13:46:45,365 [wrapper] Test setup, not cleaning
[2025-07-27 06:46:45] 2025-07-27 13:46:45,367 [wrapper] apfmon messages muted
[2025-07-27 06:46:45] 2025-07-27 13:46:45,369 [wrapper] ==== wrapper stdout END ====
[2025-07-27 06:46:45] 2025-07-27 13:46:45,370 [wrapper] ==== wrapper stderr END ====
[2025-07-27 06:46:45]  *** Error codes and diagnostics ***
[2025-07-27 06:46:45]     "exeErrorCode": 65,
[2025-07-27 06:46:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 06:46:45]     "pilotErrorCode": 1305,
[2025-07-27 06:46:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 06:46:45]  *** Listing of results directory ***
[2025-07-27 06:46:45] total 142908
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc    530466 Jul 27 03:53 pilot3.tar.gz
[2025-07-27 06:46:45] -rwx------. 1 boinc boinc     36292 Jul 27 03:59 runpilot2-wrapper.sh
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc      5112 Jul 27 03:59 queuedata.json
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc       100 Jul 27 06:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 06:46:45] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 06:43 run_atlas
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc       105 Jul 27 06:43 job.xml
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc      6595 Jul 27 06:43 init_data.xml
[2025-07-27 06:46:45] -rw-r--r--. 2 boinc boinc 142267418 Jul 27 06:43 EVNT.45743347._002633.pool.root.1
[2025-07-27 06:46:45] -rw-r--r--. 2 boinc boinc     15095 Jul 27 06:43 start_atlas.sh
[2025-07-27 06:46:45] drwxrwx--x. 2 boinc boinc      4096 Jul 27 06:43 shared
[2025-07-27 06:46:45] -rw-r--r--. 2 boinc boinc    542891 Jul 27 06:43 input.tar.gz
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc         0 Jul 27 06:43 boinc_lockfile
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc      2563 Jul 27 06:43 pandaJob.out
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc    980117 Jul 27 06:43 agis_schedconf.cvmfs.json
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc   1593052 Jul 27 06:43 agis_ddmendpoints.agis.ALL.json
[2025-07-27 06:46:45] drwx------. 4 boinc boinc      4096 Jul 27 06:43 pilot3
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc       521 Jul 27 06:44 boinc_task_state.xml
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc       951 Jul 27 06:44 memory_monitor_summary.json
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc     20829 Jul 27 06:44 log.45743349._047383.job.log.tgz.1
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc        95 Jul 27 06:45 pilot_heartbeat.json
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc      8372 Jul 27 06:46 heartbeat.json
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc        22 Jul 27 06:46 wrapper_checkpoint.txt
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc      8192 Jul 27 06:46 boinc_mmap_file
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc      4665 Jul 27 06:46 pilotlog.txt
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc     74219 Jul 27 06:46 log.45743349._047383.job.log.1
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc       188 Jul 27 06:46 output.list
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc       620 Jul 27 06:46 runtime_log
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc    112640 Jul 27 06:46 result.tar.gz
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc       644 Jul 27 06:46 WmkMDmPHE07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmf5ULDmkaJ7mm.diag
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc      8485 Jul 27 06:46 runtime_log.err
[2025-07-27 06:46:45] -rw-r--r--. 1 boinc boinc     21593 Jul 27 06:46 stderr.txt
[2025-07-27 06:46:45] No HITS result produced
[2025-07-27 06:46:45]  *** Contents of shared directory: ***
[2025-07-27 06:46:45] total 139596
[2025-07-27 06:46:45] -rw-r--r--. 2 boinc boinc 142267418 Jul 27 06:43 ATLAS.root_0
[2025-07-27 06:46:45] -rw-r--r--. 2 boinc boinc     15095 Jul 27 06:43 start_atlas.sh
[2025-07-27 06:46:45] -rw-r--r--. 2 boinc boinc    542891 Jul 27 06:43 input.tar.gz
[2025-07-27 06:46:45] -rw-------. 1 boinc boinc    112640 Jul 27 06:46 result.tar.gz
06:46:46 (1989234): run_atlas exited; CPU time 18.384798
06:46:46 (1989234): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN