Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:38:54 (129534): wrapper (7.7.26015): starting
09:38:54 (129534): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 09:38:54] Arguments: --nthreads 8
[2025-07-27 09:38:54] Threads: 8
[2025-07-27 09:38:54] Checking for CVMFS
[2025-07-27 09:38:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:38:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:38:54] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:38:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:38:55] 2.12.6.0 2533812 18432 341968 148813 1 104 20346260 32935937 19557 16776704 0 61531679 99.589 101556768 22675 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 09:38:55] CVMFS is ok
[2025-07-27 09:38:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 09:38:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 09:38:55] Further information can be found at the LHC@home message board.
[2025-07-27 09:38:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:38:55] Checking for apptainer binary...
[2025-07-27 09:38:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:38:55] Running /usr/bin/apptainer --version
[2025-07-27 09:38:55] apptainer version 1.4.1-1.el9
[2025-07-27 09:38:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:38:56] c6-12-29-3.aglt2.org
[2025-07-27 09:38:56] apptainer works
[2025-07-27 09:38:56] Set ATHENA_PROC_NUMBER=8
[2025-07-27 09:38:56] Set ATHENA_CORE_NUMBER=8
[2025-07-27 09:38:56] Starting ATLAS job with PandaID=6746473204
[2025-07-27 09:38:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:03:51]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:03:51] 2025-07-27 17:03:11,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:03:51] 2025-07-27 17:03:14,199 | INFO     | monitor loop #772: job 0:6746473204 is in state 'finished'
[2025-07-27 13:03:51] 2025-07-27 17:03:14,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:03:51] 2025-07-27 17:03:14,948 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 13:03:51] 2025-07-27 17:03:15,025 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2403.0060833333323
[2025-07-27 13:03:51] 2025-07-27 17:03:15,140 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6746473204/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:03:51] 2025-07-27 17:03:15,162 | INFO     | extracted standard info from prmon json
[2025-07-27 13:03:51] 2025-07-27 17:03:15,163 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:03:51] 2025-07-27 17:03:15,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:03:51] 2025-07-27 17:03:15,167 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:03:51] 2025-07-27 17:03:15,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:03:51] 2025-07-27 17:03:15,190 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:03:51] 2025-07-27 17:03:15,190 | INFO     | sum of square deviations: 2406917741.055569
[2025-07-27 13:03:51] 2025-07-27 17:03:15,192 | INFO     | sum of deviations: 2291168236.111122
[2025-07-27 13:03:51] 2025-07-27 17:03:15,197 | INFO     | mean x: 1753629732.6111112
[2025-07-27 13:03:51] 2025-07-27 17:03:15,197 | INFO     | mean y: 2154897.6767676766
[2025-07-27 13:03:51] 2025-07-27 17:03:15,197 | INFO     | -- intersect: -1667142175.8063335
[2025-07-27 13:03:51] 2025-07-27 17:03:15,198 | INFO     | intersect: -1667142175.8063335
[2025-07-27 13:03:51] 2025-07-27 17:03:15,198 | INFO     | chi2: 2.64865903457724
[2025-07-27 13:03:51] 2025-07-27 17:03:15,199 | INFO     | sum of square deviations: 2229144373.4922194
[2025-07-27 13:03:51] 2025-07-27 17:03:15,200 | INFO     | sum of deviations: 13629816129.186535
[2025-07-27 13:03:51] 2025-07-27 17:03:15,201 | INFO     | mean x: 1753629580.1139896
[2025-07-27 13:03:51] 2025-07-27 17:03:15,201 | INFO     | mean y: 2164431.2642487045
[2025-07-27 13:03:51] 2025-07-27 17:03:15,201 | INFO     | -- intersect: -10720177746.246443
[2025-07-27 13:03:51] 2025-07-27 17:03:15,201 | INFO     | intersect: -10720177746.246443
[2025-07-27 13:03:51] 2025-07-27 17:03:15,201 | INFO     | chi2: 1.9929251347484116
[2025-07-27 13:03:51] 2025-07-27 17:03:15,202 | INFO     | current chi2=1.9929251347484116 (change=24.757203221270494 %)
[2025-07-27 13:03:51] 2025-07-27 17:03:15,202 | INFO     | right removable region: 192
[2025-07-27 13:03:51] 2025-07-27 17:03:15,202 | INFO     | sum of square deviations: 2229143152.7150164
[2025-07-27 13:03:51] 2025-07-27 17:03:15,203 | INFO     | sum of deviations: -29145645193.720207
[2025-07-27 13:03:51] 2025-07-27 17:03:15,203 | INFO     | mean x: 1753629885.1088083
[2025-07-27 13:03:51] 2025-07-27 17:03:15,204 | INFO     | mean y: 2181657.1295336788
[2025-07-27 13:03:51] 2025-07-27 17:03:15,204 | INFO     | -- intersect: 22930576529.497726
[2025-07-27 13:03:51] 2025-07-27 17:03:15,204 | INFO     | intersect: 22930576529.497726
[2025-07-27 13:03:51] 2025-07-27 17:03:15,206 | INFO     | chi2: 0.9798576876175785
[2025-07-27 13:03:51] 2025-07-27 17:03:15,206 | INFO     | current chi2=0.9798576876175785 (change=63.005518081946086 %)
[2025-07-27 13:03:51] 2025-07-27 17:03:15,206 | INFO     | sum of square deviations: 2060345598.8723352
[2025-07-27 13:03:51] 2025-07-27 17:03:15,208 | INFO     | sum of deviations: -30010717128.71277
[2025-07-27 13:03:51] 2025-07-27 17:03:15,208 | INFO     | mean x: 1753630037.606383
[2025-07-27 13:03:51] 2025-07-27 17:03:15,208 | INFO     | mean y: 2182378.760638298
[2025-07-27 13:03:51] 2025-07-27 17:03:15,208 | INFO     | -- intersect: 25545321857.799107
[2025-07-27 13:03:51] 2025-07-27 17:03:15,208 | INFO     | intersect: 25545321857.799107
[2025-07-27 13:03:51] 2025-07-27 17:03:15,209 | INFO     | chi2: 0.9456143068924383
[2025-07-27 13:03:51] 2025-07-27 17:03:15,209 | INFO     | current chi2=0.9456143068924383 (change=3.4947300161923933 %)
[2025-07-27 13:03:51] 2025-07-27 17:03:15,209 | INFO     | left removable region: 20
[2025-07-27 13:03:51] 2025-07-27 17:03:15,226 | INFO     | sum of square deviations: 1577819063.3197596
[2025-07-27 13:03:51] 2025-07-27 17:03:15,228 | INFO     | sum of deviations: -2623017310.2790713
[2025-07-27 13:03:51] 2025-07-27 17:03:15,228 | INFO     | mean x: 1753630159.5988371
[2025-07-27 13:03:51] 2025-07-27 17:03:15,228 | INFO     | mean y: 2176763.604651163
[2025-07-27 13:03:51] 2025-07-27 17:03:15,228 | INFO     | -- intersect: 2917468111.8896275
[2025-07-27 13:03:51] 2025-07-27 17:03:15,228 | INFO     | intersect: 2917468111.8896275
[2025-07-27 13:03:51] 2025-07-27 17:03:15,229 | INFO     | chi2: 0.1317251271538231
[2025-07-27 13:03:51] 2025-07-27 17:03:15,229 | INFO     | -- intersect: 2917468111.8896275
[2025-07-27 13:03:51] 2025-07-27 17:03:15,229 | INFO     | current memory leak: -1.66 B/s (using 172 data points, chi2=0.13)
[2025-07-27 13:03:51] 2025-07-27 17:03:15,230 | INFO     | could have reported an average CPU frequency of 2434 MHz (10 samples)
[2025-07-27 13:03:51] 2025-07-27 17:03:15,249 | INFO     | ..............................
[2025-07-27 13:03:51] 2025-07-27 17:03:15,250 | INFO     | . Timing measurements:
[2025-07-27 13:03:51] 2025-07-27 17:03:15,250 | INFO     | . get job = 0 s
[2025-07-27 13:03:51] 2025-07-27 17:03:15,250 | INFO     | . initial setup = 5 s
[2025-07-27 13:03:51] 2025-07-27 17:03:15,250 | INFO     | . payload setup = 42 s
[2025-07-27 13:03:51] 2025-07-27 17:03:15,250 | INFO     | . stage-in = 0 s
[2025-07-27 13:03:51] 2025-07-27 17:03:15,250 | INFO     | . payload execution = 12063 s
[2025-07-27 13:03:51] 2025-07-27 17:03:15,250 | INFO     | . stage-out = 10 s
[2025-07-27 13:03:51] 2025-07-27 17:03:15,250 | INFO     | . log creation = 0 s
[2025-07-27 13:03:51] 2025-07-27 17:03:15,250 | INFO     | ..............................
[2025-07-27 13:03:51] 2025-07-27 17:03:16,055 | INFO     | 
[2025-07-27 13:03:51] 2025-07-27 17:03:16,055 | INFO     | job summary report
[2025-07-27 13:03:51] 2025-07-27 17:03:16,055 | INFO     | --------------------------------------------------
[2025-07-27 13:03:51] 2025-07-27 17:03:16,056 | INFO     | PanDA job id: 6746473204
[2025-07-27 13:03:51] 2025-07-27 17:03:16,057 | INFO     | task id: 45759781
[2025-07-27 13:03:51] 2025-07-27 17:03:16,057 | INFO     | errors: (none)
[2025-07-27 13:03:51] 2025-07-27 17:03:16,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:03:51] 2025-07-27 17:03:16,057 | INFO     | pilot state: finished 
[2025-07-27 13:03:51] 2025-07-27 17:03:16,057 | INFO     | transexitcode: 0
[2025-07-27 13:03:51] 2025-07-27 17:03:16,057 | INFO     | exeerrorcode: 0
[2025-07-27 13:03:51] 2025-07-27 17:03:16,057 | INFO     | exeerrordiag: 
[2025-07-27 13:03:51] 2025-07-27 17:03:16,057 | INFO     | exitcode: 0
[2025-07-27 13:03:51] 2025-07-27 17:03:16,058 | INFO     | exitmsg: OK
[2025-07-27 13:03:51] 2025-07-27 17:03:16,058 | INFO     | cpuconsumptiontime: 67384 s
[2025-07-27 13:03:51] 2025-07-27 17:03:16,058 | INFO     | nevents: 400
[2025-07-27 13:03:51] 2025-07-27 17:03:16,058 | INFO     | neventsw: 0
[2025-07-27 13:03:51] 2025-07-27 17:03:16,058 | INFO     | pid: 152651
[2025-07-27 13:03:51] 2025-07-27 17:03:16,058 | INFO     | pgrp: 152651
[2025-07-27 13:03:51] 2025-07-27 17:03:16,058 | INFO     | corecount: 8
[2025-07-27 13:03:51] 2025-07-27 17:03:16,058 | INFO     | event service: False
[2025-07-27 13:03:51] 2025-07-27 17:03:16,058 | INFO     | sizes: {0: 2397242, 1: 2397326, 2: 2397525, 3: 2397525, 14: 2397553, 25: 2397581, 27: 2397999, 36: 2398027, 12110: 2427507, 12111: 2427506, 12122: 2436896, 12141: 
[2025-07-27 13:03:51] 2025-07-27 17:03:16,058 | INFO     | --------------------------------------------------
[2025-07-27 13:03:51] 2025-07-27 17:03:16,058 | INFO     | 
[2025-07-27 13:03:51] 2025-07-27 17:03:16,059 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 13:03:51] 2025-07-27 17:03:16,139 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,139 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,140 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,140 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,140 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,141 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,141 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,141 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:03:51] 2025-07-27 17:03:16,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,141 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:03:51] 2025-07-27 17:03:16,141 | INFO     | job 6746473204 has completed (purged errors)
[2025-07-27 13:03:51] 2025-07-27 17:03:16,141 | INFO     | overall cleanup function is called
[2025-07-27 13:03:51] 2025-07-27 17:03:17,174 | INFO     | --- collectZombieJob: --- 10, [152651]
[2025-07-27 13:03:51] 2025-07-27 17:03:17,174 | INFO     | zombie collector waiting for pid 152651
[2025-07-27 13:03:51] 2025-07-27 17:03:17,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:03:51] 2025-07-27 17:03:17,175 | INFO     | collected zombie processes
[2025-07-27 13:03:51] 2025-07-27 17:03:17,175 | INFO     | will attempt to kill all subprocesses of pid=152651
[2025-07-27 13:03:51] 2025-07-27 17:03:18,966 | INFO     | process IDs to be killed: [152651] (in reverse order)
[2025-07-27 13:03:51] 2025-07-27 17:03:19,343 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:03:51] 2025-07-27 17:03:19,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:03:51] 2025-07-27 17:03:19,376 | INFO     | did not find any defunct processes belonging to 152651
[2025-07-27 13:03:51] 2025-07-27 17:03:19,438 | INFO     | did not find any defunct processes belonging to 152651
[2025-07-27 13:03:51] 2025-07-27 17:03:19,439 | INFO     | ready for new job
[2025-07-27 13:03:51] 2025-07-27 17:03:19,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:03:51] 2025-07-27 17:03:19,461 | INFO     | ***************************************
[2025-07-27 13:03:51] 2025-07-27 17:03:19,462 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:03:51] 2025-07-27 17:03:19,462 | INFO     | ***************************************
[2025-07-27 13:03:51] 2025-07-27 17:03:19,462 | INFO     | 
[2025-07-27 13:03:51] 2025-07-27 17:03:19,508 | INFO     | architecture information:
[2025-07-27 13:03:51] 2025-07-27 17:03:19,525 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:03:51] 2025-07-27 17:03:19,605 | INFO     | cat /etc/os-release:
[2025-07-27 13:03:51] NAME="CentOS Linux"
[2025-07-27 13:03:51] VERSION="7 (Core)"
[2025-07-27 13:03:51] ID="centos"
[2025-07-27 13:03:51] ID_LIKE="rhel fedora"
[2025-07-27 13:03:51] VERSION_ID="7"
[2025-07-27 13:03:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:03:51] ANSI_COLOR="0;31"
[2025-07-27 13:03:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:03:51] HOME_URL="https://www.centos.org/"
[2025-07-27 13:03:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:03:51] 
[2025-07-27 13:03:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:03:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:03:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:03:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:03:51] 
[2025-07-27 13:03:51] 2025-07-27 17:03:19,606 | INFO     | ***************************************
[2025-07-27 13:03:51] 2025-07-27 17:03:20,109 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 13:03:51] 2025-07-27 17:03:20,195 | INFO     | sufficient remaining disk space (95550439424 B)
[2025-07-27 13:03:51] 2025-07-27 17:03:20,196 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:03:51] 2025-07-27 17:03:20,196 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:03:51] 2025-07-27 17:03:20,196 | INFO     | update_server=False
[2025-07-27 13:03:51] 2025-07-27 17:03:20,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:03:51] 2025-07-27 17:03:20,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:03:51] 2025-07-27 17:03:20,367 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:03:51] 2025-07-27 17:03:20,368 | INFO     | aborting loop
[2025-07-27 13:03:51] 2025-07-27 17:03:20,790 | INFO     | all job control threads have been joined
[2025-07-27 13:03:51] 2025-07-27 17:03:21,007 | INFO     | all payload control threads have been joined
[2025-07-27 13:03:51] 2025-07-27 17:03:21,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:03:51] 2025-07-27 17:03:21,169 | INFO     | all data control threads have been joined
[2025-07-27 13:03:51] 2025-07-27 17:03:21,202 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:21,375 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:21,376 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:21,469 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:21,796 | INFO     | [job] control thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:21,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:03:51] 2025-07-27 17:03:21,922 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:22,013 | INFO     | [payload] control thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:22,082 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:22,087 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:22,095 | INFO     | [job] validate thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:22,175 | INFO     | [data] control thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:22,195 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:22,201 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:22,204 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:22,586 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:25,850 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:03:51] 2025-07-27 17:03:26,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348285331264)>', '<ExcThread(monitor, started 140347468388096)>']
[2025-07-27 13:03:51] 2025-07-27 17:03:31,907 | INFO     | all workflow threads have been joined
[2025-07-27 13:03:51] 2025-07-27 17:03:31,907 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:03:51] 2025-07-27 17:03:31,908 | INFO     | traces error code: 0
[2025-07-27 13:03:51] 2025-07-27 17:03:31,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:03:51] 2025-07-27 17:03:49,909 | INFO     | PID=135112 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 13:03:51] 2025-07-27 17:03:49,909 | INFO     | .. there are 21 such processes running
[2025-07-27 13:03:51] 2025-07-27 17:03:49,910 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:03:51] 2025-07-27 17:03:49,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:03:51] 2025-07-27 17:03:49,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:03:51] 2025-07-27 17:03:49,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:03:51] 2025-07-27 17:03:49,910 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 13:03:51] 2025-07-27 17:03:49,910 | INFO     | [monitor] control thread has ended
[2025-07-27 13:03:51] 2025-07-27 17:03:50,215 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:03:51] 2025-07-27 17:03:50,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:03:51] 2025-07-27 17:03:50,227 [wrapper] pilotpid: 135112
[2025-07-27 13:03:51] 2025-07-27 17:03:50,230 [wrapper] Pilot exit status: 0
[2025-07-27 13:03:51] 2025-07-27 17:03:50,325 [wrapper] pandaids: 6746473204
[2025-07-27 13:03:51] 2025-07-27 17:03:50,866 [wrapper] cleanup supervisor_pilot  881969 135113
[2025-07-27 13:03:51] 2025-07-27 17:03:50,883 [wrapper] Test setup, not cleaning
[2025-07-27 13:03:51] 2025-07-27 17:03:50,900 [wrapper] apfmon messages muted
[2025-07-27 13:03:51] 2025-07-27 17:03:50,923 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:03:51] 2025-07-27 17:03:50,937 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:03:51]  *** Error codes and diagnostics ***
[2025-07-27 13:03:51]     "exeErrorCode": 0,
[2025-07-27 13:03:51]     "exeErrorDiag": "",
[2025-07-27 13:03:51]     "pilotErrorCode": 0,
[2025-07-27 13:03:51]     "pilotErrorDiag": "",
[2025-07-27 13:03:51]  *** Listing of results directory ***
[2025-07-27 13:03:51] total 407680
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 03:44 pilot3.tar.gz
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 03:54 queuedata.json
[2025-07-27 13:03:51] -rwx------. 1 boincer umatlas     36292 Jul 27 03:56 runpilot2-wrapper.sh
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas       100 Jul 27 09:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:03:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 09:38 run_atlas
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas       105 Jul 27 09:38 job.xml
[2025-07-27 13:03:51] -rw-r--r--. 2 boincer umatlas 239255259 Jul 27 09:38 EVNT.45759779._000004.pool.root.1
[2025-07-27 13:03:51] -rw-r--r--. 2 boincer umatlas    542880 Jul 27 09:38 input.tar.gz
[2025-07-27 13:03:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:38 start_atlas.sh
[2025-07-27 13:03:51] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 09:38 shared
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas         0 Jul 27 09:38 boinc_lockfile
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 09:38 pandaJob.out
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas    980117 Jul 27 09:39 agis_schedconf.cvmfs.json
[2025-07-27 13:03:51] drwx------. 4 boincer umatlas      4096 Jul 27 09:39 pilot3
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas      6860 Jul 27 12:58 init_data.xml
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas 171550186 Jul 27 13:02 HITS.45759781._000091.pool.root.1
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas       530 Jul 27 13:02 boinc_task_state.xml
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas      1043 Jul 27 13:02 memory_monitor_summary.json
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas   1593052 Jul 27 13:02 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas    379086 Jul 27 13:02 log.45759781._000091.job.log.tgz.1
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas        95 Jul 27 13:02 pilot_heartbeat.json
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas      7818 Jul 27 13:03 heartbeat.json
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas        28 Jul 27 13:03 wrapper_checkpoint.txt
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 13:03 boinc_mmap_file
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas       892 Jul 27 13:03 pilotlog.txt
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas   1011158 Jul 27 13:03 log.45759781._000091.job.log.1
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas       357 Jul 27 13:03 output.list
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas       620 Jul 27 13:03 runtime_log
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas   1413120 Jul 27 13:03 result.tar.gz
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas      8671 Jul 27 13:03 runtime_log.err
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas       658 Jul 27 13:03 j1FMDmBQB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOiULDmCsMhkm.diag
[2025-07-27 13:03:51] -rw-r--r--. 1 boincer umatlas     21272 Jul 27 13:03 stderr.txt
[2025-07-27 13:03:51] HITS file was successfully produced:
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas 171550186 Jul 27 13:02 shared/HITS.pool.root.1
[2025-07-27 13:03:51]  *** Contents of shared directory: ***
[2025-07-27 13:03:51] total 403116
[2025-07-27 13:03:51] -rw-r--r--. 2 boincer umatlas 239255259 Jul 27 09:38 ATLAS.root_0
[2025-07-27 13:03:51] -rw-r--r--. 2 boincer umatlas    542880 Jul 27 09:38 input.tar.gz
[2025-07-27 13:03:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:38 start_atlas.sh
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas 171550186 Jul 27 13:02 HITS.pool.root.1
[2025-07-27 13:03:51] -rw-------. 1 boincer umatlas   1413120 Jul 27 13:03 result.tar.gz
13:03:52 (129534): run_atlas exited; CPU time 67957.687066
13:03:52 (129534): called boinc_finish(0)

</stderr_txt>
]]>

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