Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:27:14 (3209501): wrapper (7.7.26015): starting
09:27:14 (3209501): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 09:27:14] Arguments: --nthreads 8
[2025-07-27 09:27:14] Threads: 8
[2025-07-27 09:27:14] Checking for CVMFS
[2025-07-27 09:27:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:27:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:27:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:27:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:27:14] 2.13.1.0 681289 14204 152272 148813 2 196 40185026 40960000 15200 16776704 0 36969339 99.898 19899541 48898 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 09:27:14] CVMFS is ok
[2025-07-27 09:27:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 09:27:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 09:27:14] Further information can be found at the LHC@home message board.
[2025-07-27 09:27:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:27:14] Checking for apptainer binary...
[2025-07-27 09:27:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:27:14] Running /usr/bin/apptainer --version
[2025-07-27 09:27:14] apptainer version 1.4.1-1.el9
[2025-07-27 09:27:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:27:15] c-212-14.aglt2.org
[2025-07-27 09:27:15] apptainer works
[2025-07-27 09:27:15] Set ATHENA_PROC_NUMBER=8
[2025-07-27 09:27:15] Set ATHENA_CORE_NUMBER=8
[2025-07-27 09:27:15] Starting ATLAS job with PandaID=6747375962
[2025-07-27 09:27:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 11:17:40]  *** The last 200 lines of the pilot log: ***
[2025-07-27 11:17:40] 2025-07-27 15:17:07,730 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 11:17:40] 2025-07-27 15:17:07,732 | INFO     | fitting pss+swap vs Time
[2025-07-27 11:17:40] 2025-07-27 15:17:07,733 | INFO     | sum of square deviations: 379832238.0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,733 | INFO     | sum of deviations: 3974206851.999999
[2025-07-27 11:17:40] 2025-07-27 15:17:07,733 | INFO     | mean x: 1753626117.0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,733 | INFO     | mean y: 2540263.925233645
[2025-07-27 11:17:40] 2025-07-27 15:17:07,734 | INFO     | -- intersect: -18345752041.97312
[2025-07-27 11:17:40] 2025-07-27 15:17:07,734 | INFO     | intersect: -18345752041.97312
[2025-07-27 11:17:40] 2025-07-27 15:17:07,734 | INFO     | chi2: 1.4578967393834414
[2025-07-27 11:17:40] 2025-07-27 15:17:07,734 | INFO     | sum of square deviations: 329031285.5
[2025-07-27 11:17:40] 2025-07-27 15:17:07,735 | INFO     | sum of deviations: 4212412157.000002
[2025-07-27 11:17:40] 2025-07-27 15:17:07,735 | INFO     | mean x: 1753625964.5
[2025-07-27 11:17:40] 2025-07-27 15:17:07,735 | INFO     | mean y: 2540977.31372549
[2025-07-27 11:17:40] 2025-07-27 15:17:07,735 | INFO     | -- intersect: -22448197469.838146
[2025-07-27 11:17:40] 2025-07-27 15:17:07,735 | INFO     | intersect: -22448197469.838146
[2025-07-27 11:17:40] 2025-07-27 15:17:07,736 | INFO     | chi2: 1.4607635490852495
[2025-07-27 11:17:40] 2025-07-27 15:17:07,736 | INFO     | current chi2=1.4607635490852495 (change=-0.196640106556551 %)
[2025-07-27 11:17:40] 2025-07-27 15:17:07,736 | INFO     | right removable region: 101
[2025-07-27 11:17:40] 2025-07-27 15:17:07,736 | INFO     | sum of square deviations: 329031285.5
[2025-07-27 11:17:40] 2025-07-27 15:17:07,737 | INFO     | sum of deviations: -11439344945.0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,737 | INFO     | mean x: 1753626269.5
[2025-07-27 11:17:40] 2025-07-27 15:17:07,737 | INFO     | mean y: 2585527.0784313725
[2025-07-27 11:17:40] 2025-07-27 15:17:07,737 | INFO     | -- intersect: 60970452977.55536
[2025-07-27 11:17:40] 2025-07-27 15:17:07,737 | INFO     | intersect: 60970452977.55536
[2025-07-27 11:17:40] 2025-07-27 15:17:07,737 | INFO     | chi2: 0.06388123686697154
[2025-07-27 11:17:40] 2025-07-27 15:17:07,738 | INFO     | current chi2=0.06388123686697154 (change=95.61826052961835 %)
[2025-07-27 11:17:40] 2025-07-27 15:17:07,738 | INFO     | sum of square deviations: 282974608.0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,738 | INFO     | sum of deviations: -11102326959.999994
[2025-07-27 11:17:40] 2025-07-27 15:17:07,738 | INFO     | mean x: 1753626422.0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,739 | INFO     | mean y: 2584267.092783505
[2025-07-27 11:17:40] 2025-07-27 15:17:07,739 | INFO     | -- intersect: 68804990392.30571
[2025-07-27 11:17:40] 2025-07-27 15:17:07,739 | INFO     | intersect: 68804990392.30571
[2025-07-27 11:17:40] 2025-07-27 15:17:07,739 | INFO     | chi2: 0.04657588971421953
[2025-07-27 11:17:40] 2025-07-27 15:17:07,739 | INFO     | current chi2=0.04657588971421953 (change=27.089874901435067 %)
[2025-07-27 11:17:40] 2025-07-27 15:17:07,739 | INFO     | sum of square deviations: 241429643.0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,740 | INFO     | sum of deviations: -9394977281.0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,740 | INFO     | mean x: 1753626574.5
[2025-07-27 11:17:40] 2025-07-27 15:17:07,740 | INFO     | mean y: 2577981.304347826
[2025-07-27 11:17:40] 2025-07-27 15:17:07,740 | INFO     | -- intersect: 68243087398.7223
[2025-07-27 11:17:40] 2025-07-27 15:17:07,740 | INFO     | intersect: 68243087398.7223
[2025-07-27 11:17:40] 2025-07-27 15:17:07,741 | INFO     | chi2: 0.046449981371721426
[2025-07-27 11:17:40] 2025-07-27 15:17:07,741 | INFO     | current chi2=0.046449981371721426 (change=0.27032944141412213 %)
[2025-07-27 11:17:40] 2025-07-27 15:17:07,741 | INFO     | left removable region: 30
[2025-07-27 11:17:40] 2025-07-27 15:17:07,741 | INFO     | sum of square deviations: 110960220.0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,741 | INFO     | sum of deviations: -2962173480.9999995
[2025-07-27 11:17:40] 2025-07-27 15:17:07,742 | INFO     | mean x: 1753626849.0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,742 | INFO     | mean y: 2551643.7183098593
[2025-07-27 11:17:40] 2025-07-27 15:17:07,742 | INFO     | -- intersect: 46817049196.78183
[2025-07-27 11:17:40] 2025-07-27 15:17:07,742 | INFO     | intersect: 46817049196.78183
[2025-07-27 11:17:40] 2025-07-27 15:17:07,742 | INFO     | chi2: 0.032713368180369184
[2025-07-27 11:17:40] 2025-07-27 15:17:07,743 | INFO     | -- intersect: 46817049196.78183
[2025-07-27 11:17:40] 2025-07-27 15:17:07,743 | INFO     | current memory leak: -26.70 B/s (using 71 data points, chi2=0.03)
[2025-07-27 11:17:40] 2025-07-27 15:17:07,743 | INFO     | could have reported an average CPU frequency of 2914 MHz (7 samples)
[2025-07-27 11:17:40] 2025-07-27 15:17:07,743 | INFO     | ..............................
[2025-07-27 11:17:40] 2025-07-27 15:17:07,744 | INFO     | . Timing measurements:
[2025-07-27 11:17:40] 2025-07-27 15:17:07,744 | INFO     | . get job = 0 s
[2025-07-27 11:17:40] 2025-07-27 15:17:07,744 | INFO     | . initial setup = 2 s
[2025-07-27 11:17:40] 2025-07-27 15:17:07,744 | INFO     | . payload setup = 9 s
[2025-07-27 11:17:40] 2025-07-27 15:17:07,744 | INFO     | . stage-in = 0 s
[2025-07-27 11:17:40] 2025-07-27 15:17:07,744 | INFO     | . payload execution = 6533 s
[2025-07-27 11:17:40] 2025-07-27 15:17:07,744 | INFO     | . stage-out = 1 s
[2025-07-27 11:17:40] 2025-07-27 15:17:07,744 | INFO     | . log creation = 0 s
[2025-07-27 11:17:40] 2025-07-27 15:17:07,744 | INFO     | ..............................
[2025-07-27 11:17:40] 2025-07-27 15:17:07,847 | INFO     | 
[2025-07-27 11:17:40] 2025-07-27 15:17:07,847 | INFO     | job summary report
[2025-07-27 11:17:40] 2025-07-27 15:17:07,847 | INFO     | --------------------------------------------------
[2025-07-27 11:17:40] 2025-07-27 15:17:07,847 | INFO     | PanDA job id: 6747375962
[2025-07-27 11:17:40] 2025-07-27 15:17:07,848 | INFO     | task id: 45743349
[2025-07-27 11:17:40] 2025-07-27 15:17:07,848 | INFO     | errors: (none)
[2025-07-27 11:17:40] 2025-07-27 15:17:07,848 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 11:17:40] 2025-07-27 15:17:07,848 | INFO     | pilot state: finished 
[2025-07-27 11:17:40] 2025-07-27 15:17:07,848 | INFO     | transexitcode: 0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,848 | INFO     | exeerrorcode: 0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,848 | INFO     | exeerrordiag: 
[2025-07-27 11:17:40] 2025-07-27 15:17:07,848 | INFO     | exitcode: 0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,848 | INFO     | exitmsg: OK
[2025-07-27 11:17:40] 2025-07-27 15:17:07,848 | INFO     | cpuconsumptiontime: 39190 s
[2025-07-27 11:17:40] 2025-07-27 15:17:07,849 | INFO     | nevents: 400
[2025-07-27 11:17:40] 2025-07-27 15:17:07,849 | INFO     | neventsw: 0
[2025-07-27 11:17:40] 2025-07-27 15:17:07,849 | INFO     | pid: 3219566
[2025-07-27 11:17:40] 2025-07-27 15:17:07,849 | INFO     | pgrp: 3219566
[2025-07-27 11:17:40] 2025-07-27 15:17:07,849 | INFO     | corecount: 8
[2025-07-27 11:17:40] 2025-07-27 15:17:07,849 | INFO     | event service: False
[2025-07-27 11:17:40] 2025-07-27 15:17:07,849 | INFO     | sizes: {0: 2397475, 6: 2397737, 11: 2397765, 6547: 2424714, 6549: 2433712, 6552: 2433796, 6561: 2434118}
[2025-07-27 11:17:40] 2025-07-27 15:17:07,849 | INFO     | --------------------------------------------------
[2025-07-27 11:17:40] 2025-07-27 15:17:07,850 | INFO     | 
[2025-07-27 11:17:40] 2025-07-27 15:17:07,850 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 11:17:40] 2025-07-27 15:17:07,874 | INFO     | PID=3213166 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 11:17:40] 2025-07-27 15:17:07,874 | INFO     | .. there are 15 such processes running
[2025-07-27 11:17:40] 2025-07-27 15:17:07,883 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,884 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,884 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,884 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,884 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,884 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,884 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,885 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,885 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,885 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,885 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,885 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,885 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,885 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 11:17:40] 2025-07-27 15:17:07,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,885 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 11:17:40] 2025-07-27 15:17:07,885 | INFO     | job 6747375962 has completed (purged errors)
[2025-07-27 11:17:40] 2025-07-27 15:17:07,886 | INFO     | overall cleanup function is called
[2025-07-27 11:17:40] 2025-07-27 15:17:08,895 | INFO     | --- collectZombieJob: --- 10, [3219566]
[2025-07-27 11:17:40] 2025-07-27 15:17:08,895 | INFO     | zombie collector waiting for pid 3219566
[2025-07-27 11:17:40] 2025-07-27 15:17:08,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 11:17:40] 2025-07-27 15:17:08,896 | INFO     | collected zombie processes
[2025-07-27 11:17:40] 2025-07-27 15:17:08,896 | INFO     | will attempt to kill all subprocesses of pid=3219566
[2025-07-27 11:17:40] 2025-07-27 15:17:09,317 | INFO     | process IDs to be killed: [3219566] (in reverse order)
[2025-07-27 11:17:40] 2025-07-27 15:17:09,445 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 11:17:40] 2025-07-27 15:17:09,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 11:17:40] 2025-07-27 15:17:09,464 | INFO     | did not find any defunct processes belonging to 3219566
[2025-07-27 11:17:40] 2025-07-27 15:17:09,478 | INFO     | did not find any defunct processes belonging to 3219566
[2025-07-27 11:17:40] 2025-07-27 15:17:09,478 | INFO     | ready for new job
[2025-07-27 11:17:40] 2025-07-27 15:17:09,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 11:17:40] 2025-07-27 15:17:09,480 | INFO     | ***************************************
[2025-07-27 11:17:40] 2025-07-27 15:17:09,480 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 11:17:40] 2025-07-27 15:17:09,480 | INFO     | ***************************************
[2025-07-27 11:17:40] 2025-07-27 15:17:09,480 | INFO     | 
[2025-07-27 11:17:40] 2025-07-27 15:17:09,485 | INFO     | architecture information:
[2025-07-27 11:17:40] 2025-07-27 15:17:09,485 | INFO     | executing command: cat /etc/os-release
[2025-07-27 11:17:40] 2025-07-27 15:17:09,502 | INFO     | cat /etc/os-release:
[2025-07-27 11:17:40] NAME="CentOS Linux"
[2025-07-27 11:17:40] VERSION="7 (Core)"
[2025-07-27 11:17:40] ID="centos"
[2025-07-27 11:17:40] ID_LIKE="rhel fedora"
[2025-07-27 11:17:40] VERSION_ID="7"
[2025-07-27 11:17:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 11:17:40] ANSI_COLOR="0;31"
[2025-07-27 11:17:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 11:17:40] HOME_URL="https://www.centos.org/"
[2025-07-27 11:17:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 11:17:40] 
[2025-07-27 11:17:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 11:17:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 11:17:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 11:17:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 11:17:40] 
[2025-07-27 11:17:40] 2025-07-27 15:17:09,502 | INFO     | ***************************************
[2025-07-27 11:17:40] 2025-07-27 15:17:10,006 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 11:17:40] 2025-07-27 15:17:10,025 | INFO     | sufficient remaining disk space (128948633600 B)
[2025-07-27 11:17:40] 2025-07-27 15:17:10,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 11:17:40] 2025-07-27 15:17:10,025 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 11:17:40] 2025-07-27 15:17:10,025 | INFO     | update_server=False
[2025-07-27 11:17:40] 2025-07-27 15:17:10,025 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 11:17:40] 2025-07-27 15:17:10,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 11:17:40] 2025-07-27 15:17:10,026 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 11:17:40] 2025-07-27 15:17:10,619 | INFO     | all data control threads have been joined
[2025-07-27 11:17:40] 2025-07-27 15:17:10,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:17:40] 2025-07-27 15:17:10,639 | INFO     | aborting loop
[2025-07-27 11:17:40] 2025-07-27 15:17:10,729 | INFO     | all job control threads have been joined
[2025-07-27 11:17:40] 2025-07-27 15:17:11,030 | INFO     | [job] retrieve thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:11,145 | INFO     | [payload] validate_post thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:11,330 | INFO     | [job] validate thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:11,421 | INFO     | all payload control threads have been joined
[2025-07-27 11:17:40] 2025-07-27 15:17:11,489 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:11,625 | INFO     | [data] control thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:11,645 | INFO     | [job] job monitor thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:11,735 | INFO     | [job] control thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:12,032 | INFO     | [data] copytool_out thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:12,036 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:12,083 | INFO     | [data] copytool_in thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:12,248 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:12,335 | INFO     | [payload] failed_post thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:12,422 | INFO     | [payload] control thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:12,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:17:40] 2025-07-27 15:17:13,865 | INFO     | [job] queue monitor thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:14,033 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:20,163 | INFO     | job.realtimelogging is not enabled
[2025-07-27 11:17:40] 2025-07-27 15:17:21,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 11:17:40] 2025-07-27 15:17:21,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974101776192)>', '<ExcThread(monitor, started 139973177108224)>']
[2025-07-27 11:17:40] 2025-07-27 15:17:26,406 | INFO     | all workflow threads have been joined
[2025-07-27 11:17:40] 2025-07-27 15:17:26,407 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 11:17:40] 2025-07-27 15:17:26,407 | INFO     | traces error code: 0
[2025-07-27 11:17:40] 2025-07-27 15:17:26,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 11:17:40] 2025-07-27 15:17:40,414 | INFO     | PID=3213166 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 11:17:40] 2025-07-27 15:17:40,415 | INFO     | .. there are 15 such processes running
[2025-07-27 11:17:40] 2025-07-27 15:17:40,416 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 11:17:40] 2025-07-27 15:17:40,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 11:17:40] 2025-07-27 15:17:40,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 11:17:40] 2025-07-27 15:17:40,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 11:17:40] 2025-07-27 15:17:40,416 | INFO     | [monitor] control thread has ended
[2025-07-27 11:17:40] 2025-07-27 15:17:40,640 [wrapper] ==== pilot stdout END ====
[2025-07-27 11:17:40] 2025-07-27 15:17:40,646 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 11:17:40] 2025-07-27 15:17:40,650 [wrapper] pilotpid: 3213166
[2025-07-27 11:17:40] 2025-07-27 15:17:40,654 [wrapper] Pilot exit status: 0
[2025-07-27 11:17:40] 2025-07-27 15:17:40,674 [wrapper] pandaids: 6747375962
[2025-07-27 11:17:40] 2025-07-27 15:17:40,778 [wrapper] cleanup supervisor_pilot 3483466 3213167
[2025-07-27 11:17:40] 2025-07-27 15:17:40,788 [wrapper] Test setup, not cleaning
[2025-07-27 11:17:40] 2025-07-27 15:17:40,795 [wrapper] apfmon messages muted
[2025-07-27 11:17:40] 2025-07-27 15:17:40,800 [wrapper] ==== wrapper stdout END ====
[2025-07-27 11:17:40] 2025-07-27 15:17:40,808 [wrapper] ==== wrapper stderr END ====
[2025-07-27 11:17:40]  *** Error codes and diagnostics ***
[2025-07-27 11:17:40]     "exeErrorCode": 0,
[2025-07-27 11:17:40]     "exeErrorDiag": "",
[2025-07-27 11:17:40]     "pilotErrorCode": 0,
[2025-07-27 11:17:40]     "pilotErrorDiag": "",
[2025-07-27 11:17:40]  *** Listing of results directory ***
[2025-07-27 11:17:40] total 340664
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 06:51 queuedata.json
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 06:51 pilot3.tar.gz
[2025-07-27 11:17:40] -rwx------. 1 boincer umatlas     36292 Jul 27 06:53 runpilot2-wrapper.sh
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas       100 Jul 27 09:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 11:17:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 09:27 run_atlas
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas       105 Jul 27 09:27 job.xml
[2025-07-27 11:17:40] -rw-r--r--. 2 boincer umatlas 144289881 Jul 27 09:27 EVNT.45743347._002621.pool.root.1
[2025-07-27 11:17:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:27 start_atlas.sh
[2025-07-27 11:17:40] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 09:27 shared
[2025-07-27 11:17:40] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 09:27 input.tar.gz
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas         0 Jul 27 09:27 boinc_lockfile
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 09:27 pandaJob.out
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas    980117 Jul 27 09:27 agis_schedconf.cvmfs.json
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas   1593052 Jul 27 09:27 agis_ddmendpoints.agis.ALL.json
[2025-07-27 11:17:40] drwx------. 4 boincer umatlas      4096 Jul 27 09:27 pilot3
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 11:10 init_data.xml
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas 198784612 Jul 27 11:16 HITS.45743349._047197.pool.root.1
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas       529 Jul 27 11:16 boinc_task_state.xml
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas        95 Jul 27 11:16 pilot_heartbeat.json
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas      1034 Jul 27 11:16 memory_monitor_summary.json
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas    318575 Jul 27 11:16 log.45743349._047197.job.log.tgz.1
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas      7775 Jul 27 11:17 heartbeat.json
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas        27 Jul 27 11:17 wrapper_checkpoint.txt
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas       823 Jul 27 11:17 pilotlog.txt
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas    624117 Jul 27 11:17 log.45743349._047197.job.log.1
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas       357 Jul 27 11:17 output.list
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas       620 Jul 27 11:17 runtime_log
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas    962560 Jul 27 11:17 result.tar.gz
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 11:17 runtime_log.err
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas       652 Jul 27 11:17 OfGODmCBE07n9Rq4apOajLDm4fhM0noT9bVof3QYDm2Q2KDmOJWC8n.diag
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas     21011 Jul 27 11:17 stderr.txt
[2025-07-27 11:17:40] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 11:17 boinc_mmap_file
[2025-07-27 11:17:40] HITS file was successfully produced:
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas 198784612 Jul 27 11:16 shared/HITS.pool.root.1
[2025-07-27 11:17:40]  *** Contents of shared directory: ***
[2025-07-27 11:17:40] total 336536
[2025-07-27 11:17:40] -rw-r--r--. 2 boincer umatlas 144289881 Jul 27 09:27 ATLAS.root_0
[2025-07-27 11:17:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:27 start_atlas.sh
[2025-07-27 11:17:40] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 09:27 input.tar.gz
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas 198784612 Jul 27 11:16 HITS.pool.root.1
[2025-07-27 11:17:40] -rw-------. 1 boincer umatlas    962560 Jul 27 11:17 result.tar.gz
11:18:02 (3209501): run_atlas exited; CPU time 39339.258874
11:18:02 (3209501): called boinc_finish(0)

</stderr_txt>
]]>

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