Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:42:56 (3392750): wrapper (7.7.26015): starting
10:42:56 (3392750): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 10:42:56] Arguments: --nthreads 12
[2025-07-27 10:42:56] Threads: 12
[2025-07-27 10:42:56] Checking for CVMFS
[2025-07-27 10:42:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:42:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:42:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:42:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:42:57] 2.12.6.0 1263230 18499 346076 148815 0 514 28263657 32935937 8607 16776704 0 36247876 99.605 57914617 29019 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 10:42:57] CVMFS is ok
[2025-07-27 10:42:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 10:42:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 10:42:57] Further information can be found at the LHC@home message board.
[2025-07-27 10:42:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:42:57] Checking for apptainer binary...
[2025-07-27 10:42:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 10:42:57] Running /usr/bin/apptainer --version
[2025-07-27 10:42:57] apptainer version 1.4.1-1.el9
[2025-07-27 10:42:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:42:57] c6-5-7-2.aglt2.org
[2025-07-27 10:42:57] apptainer works
[2025-07-27 10:42:57] Set ATHENA_PROC_NUMBER=12
[2025-07-27 10:42:57] Set ATHENA_CORE_NUMBER=12
[2025-07-27 10:42:57] Starting ATLAS job with PandaID=6746473113
[2025-07-27 10:42:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:25:31]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:25:31] 2025-07-27 16:24:58,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:25:31] 2025-07-27 16:24:58,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:25:31] 2025-07-27 16:24:58,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:25:31] 2025-07-27 16:24:58,818 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:25:31] 2025-07-27 16:24:58,819 | INFO     | sum of square deviations: 310052325.0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,819 | INFO     | sum of deviations: -4024484211.0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,819 | INFO     | mean x: 1753630443.5
[2025-07-27 12:25:31] 2025-07-27 16:24:58,819 | INFO     | mean y: 2389946.5
[2025-07-27 12:25:31] 2025-07-27 16:24:58,819 | INFO     | -- intersect: 22764541566.536
[2025-07-27 12:25:31] 2025-07-27 16:24:58,819 | INFO     | intersect: 22764541566.536
[2025-07-27 12:25:31] 2025-07-27 16:24:58,820 | INFO     | chi2: 2.7015953806931305
[2025-07-27 12:25:31] 2025-07-27 16:24:58,820 | INFO     | sum of square deviations: 265828240.0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,820 | INFO     | sum of deviations: 2669676101.999998
[2025-07-27 12:25:31] 2025-07-27 16:24:58,820 | INFO     | mean x: 1753630291.0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,820 | INFO     | mean y: 2412184.484210526
[2025-07-27 12:25:31] 2025-07-27 16:24:58,820 | INFO     | -- intersect: -17609053322.814796
[2025-07-27 12:25:31] 2025-07-27 16:24:58,820 | INFO     | intersect: -17609053322.814796
[2025-07-27 12:25:31] 2025-07-27 16:24:58,820 | INFO     | chi2: 1.988166916183845
[2025-07-27 12:25:31] 2025-07-27 16:24:58,820 | INFO     | current chi2=1.988166916183845 (change=26.407672651788662 %)
[2025-07-27 12:25:31] 2025-07-27 16:24:58,820 | INFO     | sum of square deviations: 226022842.5
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | sum of deviations: 2635376259.500002
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | mean x: 1753630138.5
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | mean y: 2412064.722222222
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | -- intersect: -20444526766.01388
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | intersect: -20444526766.01388
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | chi2: 1.991102324521648
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | current chi2=1.991102324521648 (change=-0.14764395855843726 %)
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | right removable region: 89
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | sum of square deviations: 265828240.0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | sum of deviations: -20020391906.0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | mean x: 1753630596.0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,821 | INFO     | mean y: 2444182.7578947367
[2025-07-27 12:25:31] 2025-07-27 16:24:58,822 | INFO     | -- intersect: 132074084841.67493
[2025-07-27 12:25:31] 2025-07-27 16:24:58,822 | INFO     | intersect: 132074084841.67493
[2025-07-27 12:25:31] 2025-07-27 16:24:58,822 | INFO     | chi2: 1.0908401845199922
[2025-07-27 12:25:31] 2025-07-27 16:24:58,822 | INFO     | current chi2=1.0908401845199922 (change=59.62237008859104 %)
[2025-07-27 12:25:31] 2025-07-27 16:24:58,822 | INFO     | sum of square deviations: 226022842.5
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | sum of deviations: -22325338668.5
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | mean x: 1753630748.5
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | mean y: 2452768.1222222224
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | -- intersect: 173216805471.24625
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | intersect: 173216805471.24625
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | chi2: 0.9756963346161518
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | current chi2=0.9756963346161518 (change=10.55551963870012 %)
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | left removable region: 20
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | sum of square deviations: 101843770.0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | sum of deviations: -7490560148.0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | mean x: 1753630718.0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | mean y: 2445449.0434782607
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | -- intersect: 128981138702.04683
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | intersect: 128981138702.04683
[2025-07-27 12:25:31] 2025-07-27 16:24:58,823 | INFO     | chi2: 0.16262039945898993
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | -- intersect: 128981138702.04683
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | current memory leak: -73.55 B/s (using 69 data points, chi2=0.16)
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | could have reported an average CPU frequency of 2646 MHz (7 samples)
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | ..............................
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | . Timing measurements:
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | . get job = 0 s
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | . initial setup = 2 s
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | . payload setup = 9 s
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | . stage-in = 0 s
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | . payload execution = 6069 s
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | . stage-out = 0 s
[2025-07-27 12:25:31] 2025-07-27 16:24:58,824 | INFO     | . log creation = 0 s
[2025-07-27 12:25:31] 2025-07-27 16:24:58,825 | INFO     | ..............................
[2025-07-27 12:25:31] 2025-07-27 16:24:58,891 | INFO     | 
[2025-07-27 12:25:31] 2025-07-27 16:24:58,892 | INFO     | job summary report
[2025-07-27 12:25:31] 2025-07-27 16:24:58,892 | INFO     | --------------------------------------------------
[2025-07-27 12:25:31] 2025-07-27 16:24:58,892 | INFO     | PanDA job id: 6746473113
[2025-07-27 12:25:31] 2025-07-27 16:24:58,892 | INFO     | task id: 45759781
[2025-07-27 12:25:31] 2025-07-27 16:24:58,892 | INFO     | errors: (none)
[2025-07-27 12:25:31] 2025-07-27 16:24:58,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:25:31] 2025-07-27 16:24:58,892 | INFO     | pilot state: finished 
[2025-07-27 12:25:31] 2025-07-27 16:24:58,892 | INFO     | transexitcode: 0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,892 | INFO     | exeerrorcode: 0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,892 | INFO     | exeerrordiag: 
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | exitcode: 0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | exitmsg: OK
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | cpuconsumptiontime: 59965 s
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | nevents: 400
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | neventsw: 0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | pid: 3405374
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | pgrp: 3405374
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | corecount: 12
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | event service: False
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | sizes: {0: 2397418, 6: 2397680, 11: 2397708, 6081: 2424374, 6082: 2433372, 6085: 2433428, 6090: 2433750}
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | --------------------------------------------------
[2025-07-27 12:25:31] 2025-07-27 16:24:58,893 | INFO     | 
[2025-07-27 12:25:31] 2025-07-27 16:24:58,894 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 12:25:31] 2025-07-27 16:24:58,911 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,911 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,911 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,913 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,913 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:25:31] 2025-07-27 16:24:58,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,913 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:25:31] 2025-07-27 16:24:58,913 | INFO     | job 6746473113 has completed (purged errors)
[2025-07-27 12:25:31] 2025-07-27 16:24:58,913 | INFO     | overall cleanup function is called
[2025-07-27 12:25:31] 2025-07-27 16:24:59,920 | INFO     | --- collectZombieJob: --- 10, [3405374]
[2025-07-27 12:25:31] 2025-07-27 16:24:59,921 | INFO     | zombie collector waiting for pid 3405374
[2025-07-27 12:25:31] 2025-07-27 16:24:59,921 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:25:31] 2025-07-27 16:24:59,921 | INFO     | collected zombie processes
[2025-07-27 12:25:31] 2025-07-27 16:24:59,921 | INFO     | will attempt to kill all subprocesses of pid=3405374
[2025-07-27 12:25:31] 2025-07-27 16:25:00,300 | INFO     | process IDs to be killed: [3405374] (in reverse order)
[2025-07-27 12:25:31] 2025-07-27 16:25:00,393 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:25:31] 2025-07-27 16:25:00,393 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:25:31] 2025-07-27 16:25:00,404 | INFO     | did not find any defunct processes belonging to 3405374
[2025-07-27 12:25:31] 2025-07-27 16:25:00,414 | INFO     | did not find any defunct processes belonging to 3405374
[2025-07-27 12:25:31] 2025-07-27 16:25:00,414 | INFO     | ready for new job
[2025-07-27 12:25:31] 2025-07-27 16:25:00,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:25:31] 2025-07-27 16:25:00,416 | INFO     | ***************************************
[2025-07-27 12:25:31] 2025-07-27 16:25:00,416 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:25:31] 2025-07-27 16:25:00,416 | INFO     | ***************************************
[2025-07-27 12:25:31] 2025-07-27 16:25:00,416 | INFO     | 
[2025-07-27 12:25:31] 2025-07-27 16:25:00,432 | INFO     | architecture information:
[2025-07-27 12:25:31] 2025-07-27 16:25:00,432 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:25:31] 2025-07-27 16:25:00,446 | INFO     | cat /etc/os-release:
[2025-07-27 12:25:31] NAME="CentOS Linux"
[2025-07-27 12:25:31] VERSION="7 (Core)"
[2025-07-27 12:25:31] ID="centos"
[2025-07-27 12:25:31] ID_LIKE="rhel fedora"
[2025-07-27 12:25:31] VERSION_ID="7"
[2025-07-27 12:25:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:25:31] ANSI_COLOR="0;31"
[2025-07-27 12:25:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:25:31] HOME_URL="https://www.centos.org/"
[2025-07-27 12:25:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:25:31] 
[2025-07-27 12:25:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:25:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:25:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:25:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:25:31] 
[2025-07-27 12:25:31] 2025-07-27 16:25:00,447 | INFO     | ***************************************
[2025-07-27 12:25:31] 2025-07-27 16:25:00,950 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 12:25:31] 2025-07-27 16:25:00,965 | INFO     | sufficient remaining disk space (76302778368 B)
[2025-07-27 12:25:31] 2025-07-27 16:25:00,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:25:31] 2025-07-27 16:25:00,966 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:25:31] 2025-07-27 16:25:00,966 | INFO     | update_server=False
[2025-07-27 12:25:31] 2025-07-27 16:25:00,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:25:31] 2025-07-27 16:25:00,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:25:31] 2025-07-27 16:25:01,062 | INFO     | all data control threads have been joined
[2025-07-27 12:25:31] 2025-07-27 16:25:01,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:25:31] 2025-07-27 16:25:01,077 | INFO     | aborting loop
[2025-07-27 12:25:31] 2025-07-27 16:25:01,501 | INFO     | all payload control threads have been joined
[2025-07-27 12:25:31] 2025-07-27 16:25:01,971 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:02,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:25:31] 2025-07-27 16:25:02,068 | INFO     | [data] control thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:02,082 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:02,157 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:02,347 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:02,475 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:02,507 | INFO     | [payload] control thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:02,507 | INFO     | all job control threads have been joined
[2025-07-27 12:25:31] 2025-07-27 16:25:02,508 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:02,895 | INFO     | [job] validate thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:03,144 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:03,173 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:03,204 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:03,513 | INFO     | [job] control thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:03,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:25:31] 2025-07-27 16:25:04,011 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:04,906 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:04,972 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:25:31] 2025-07-27 16:25:06,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140210432042816)>', '<ExcThread(monitor, started 140209802962688)>']
[2025-07-27 12:25:31] 2025-07-27 16:25:11,658 | INFO     | all workflow threads have been joined
[2025-07-27 12:25:31] 2025-07-27 16:25:11,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:25:31] 2025-07-27 16:25:11,659 | INFO     | traces error code: 0
[2025-07-27 12:25:31] 2025-07-27 16:25:11,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:25:31] 2025-07-27 16:25:31,036 | INFO     | PID=3396338 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 12:25:31] 2025-07-27 16:25:31,036 | INFO     | .. there are 6 such processes running
[2025-07-27 12:25:31] 2025-07-27 16:25:31,037 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:25:31] 2025-07-27 16:25:31,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:25:31] 2025-07-27 16:25:31,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:25:31] 2025-07-27 16:25:31,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:25:31] 2025-07-27 16:25:31,037 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 12:25:31] 2025-07-27 16:25:31,038 | INFO     | [monitor] control thread has ended
[2025-07-27 12:25:31] 2025-07-27 16:25:31,333 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:25:31] 2025-07-27 16:25:31,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:25:31] 2025-07-27 16:25:31,338 [wrapper] pilotpid: 3396338
[2025-07-27 12:25:31] 2025-07-27 16:25:31,341 [wrapper] Pilot exit status: 0
[2025-07-27 12:25:31] 2025-07-27 16:25:31,351 [wrapper] pandaids: 6746473113
[2025-07-27 12:25:31] 2025-07-27 16:25:31,406 [wrapper] cleanup supervisor_pilot 3913567 3396339
[2025-07-27 12:25:31] 2025-07-27 16:25:31,409 [wrapper] Test setup, not cleaning
[2025-07-27 12:25:31] 2025-07-27 16:25:31,412 [wrapper] apfmon messages muted
[2025-07-27 12:25:31] 2025-07-27 16:25:31,415 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:25:31] 2025-07-27 16:25:31,418 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:25:31]  *** Error codes and diagnostics ***
[2025-07-27 12:25:31]     "exeErrorCode": 0,
[2025-07-27 12:25:31]     "exeErrorDiag": "",
[2025-07-27 12:25:31]     "pilotErrorCode": 0,
[2025-07-27 12:25:31]     "pilotErrorDiag": "",
[2025-07-27 12:25:31]  *** Listing of results directory ***
[2025-07-27 12:25:31] total 411108
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 03:44 pilot3.tar.gz
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 03:49 queuedata.json
[2025-07-27 12:25:31] -rwx------. 1 boincer umatlas     36292 Jul 27 03:51 runpilot2-wrapper.sh
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas       100 Jul 27 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:25:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 10:42 run_atlas
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas       105 Jul 27 10:42 job.xml
[2025-07-27 12:25:31] -rw-r--r--. 2 boincer umatlas 239404431 Jul 27 10:42 EVNT.45759779._000002.pool.root.1
[2025-07-27 12:25:31] -rw-r--r--. 2 boincer umatlas    542882 Jul 27 10:42 input.tar.gz
[2025-07-27 12:25:31] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:42 start_atlas.sh
[2025-07-27 12:25:31] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 10:42 shared
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas         0 Jul 27 10:42 boinc_lockfile
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas      2561 Jul 27 10:42 pandaJob.out
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas    980109 Jul 27 10:43 agis_schedconf.cvmfs.json
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas   1593052 Jul 27 10:43 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:25:31] drwx------. 4 boincer umatlas      4096 Jul 27 10:43 pilot3
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 12:18 init_data.xml
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas 175739961 Jul 27 12:24 HITS.45759781._000045.pool.root.1
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas       529 Jul 27 12:24 boinc_task_state.xml
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas      1038 Jul 27 12:24 memory_monitor_summary.json
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas    390690 Jul 27 12:24 log.45759781._000045.job.log.tgz.1
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas      7809 Jul 27 12:24 heartbeat.json
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 12:25 boinc_mmap_file
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas        27 Jul 27 12:25 wrapper_checkpoint.txt
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas        95 Jul 27 12:25 pilot_heartbeat.json
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas       892 Jul 27 12:25 pilotlog.txt
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas    584793 Jul 27 12:25 log.45759781._000045.job.log.1
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas       357 Jul 27 12:25 output.list
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas       620 Jul 27 12:25 runtime_log
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas    993280 Jul 27 12:25 result.tar.gz
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 12:25 runtime_log.err
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas       653 Jul 27 12:25 41ANDm7KB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxfULDmKsUBsn.diag
[2025-07-27 12:25:31] -rw-r--r--. 1 boincer umatlas     20866 Jul 27 12:25 stderr.txt
[2025-07-27 12:25:31] HITS file was successfully produced:
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas 175739961 Jul 27 12:24 shared/HITS.pool.root.1
[2025-07-27 12:25:31]  *** Contents of shared directory: ***
[2025-07-27 12:25:31] total 406948
[2025-07-27 12:25:31] -rw-r--r--. 2 boincer umatlas 239404431 Jul 27 10:42 ATLAS.root_0
[2025-07-27 12:25:31] -rw-r--r--. 2 boincer umatlas    542882 Jul 27 10:42 input.tar.gz
[2025-07-27 12:25:31] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:42 start_atlas.sh
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas 175739961 Jul 27 12:24 HITS.pool.root.1
[2025-07-27 12:25:31] -rw-------. 1 boincer umatlas    993280 Jul 27 12:25 result.tar.gz
12:25:32 (3392750): run_atlas exited; CPU time 60052.356604
12:25:32 (3392750): called boinc_finish(0)

</stderr_txt>
]]>

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