Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:20:01 (3186634): wrapper (7.7.26015): starting
09:20:01 (3186634): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 09:20:01] Arguments: --nthreads 8
[2025-07-27 09:20:01] Threads: 8
[2025-07-27 09:20:01] Checking for CVMFS
[2025-07-27 09:20:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:20:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:20:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:20:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:20:01] 2.13.1.0 681289 14197 150736 148813 2 64 40185026 40960000 15200 16776704 0 36914023 99.898 19899540 48898 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 09:20:01] CVMFS is ok
[2025-07-27 09:20:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 09:20:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 09:20:01] Further information can be found at the LHC@home message board.
[2025-07-27 09:20:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:20:01] Checking for apptainer binary...
[2025-07-27 09:20:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:20:01] Running /usr/bin/apptainer --version
[2025-07-27 09:20:01] apptainer version 1.4.1-1.el9
[2025-07-27 09:20:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:20:02] c-212-14.aglt2.org
[2025-07-27 09:20:02] apptainer works
[2025-07-27 09:20:02] Set ATHENA_PROC_NUMBER=8
[2025-07-27 09:20:02] Set ATHENA_CORE_NUMBER=8
[2025-07-27 09:20:02] Starting ATLAS job with PandaID=6746473133
[2025-07-27 09:20:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 11:01:09]  *** The last 200 lines of the pilot log: ***
[2025-07-27 11:01:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 11:01:09]  replicas=None
[2025-07-27 11:01:09]  scope=mc23_13p6TeV
[2025-07-27 11:01:09]  status=None
[2025-07-27 11:01:09]  status_code=0
[2025-07-27 11:01:09]  storage_token=
[2025-07-27 11:01:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746473133/log.45759781._000055.job.log.tgz.1
[2025-07-27 11:01:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/b8/log.45759781._000055.job.log.tgz.1
[2025-07-27 11:01:09]  workdir=None
[2025-07-27 11:01:09] ]
[2025-07-27 11:01:09] 2025-07-27 15:00:26,512 | INFO     | transferring file log.45759781._000055.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746473133/log.45759781._000055.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 11:01:09] 2025-07-27 15:00:26,512 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746473133/log.45759781._000055.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759781._000055.job
[2025-07-27 11:01:09] 2025-07-27 15:00:26,540 | INFO     | adding to output.list: log.45759781._000055.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/b8/log.45759781._000055.job.log.tg
[2025-07-27 11:01:09] 2025-07-27 15:00:26,540 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 11:01:09] 2025-07-27 15:00:26,540 | INFO     | summary of transferred files:
[2025-07-27 11:01:09] 2025-07-27 15:00:26,540 | INFO     |  -- lfn=log.45759781._000055.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 11:01:09] 2025-07-27 15:00:26,541 | INFO     | stage-out finished correctly
[2025-07-27 11:01:09] 2025-07-27 15:00:28,101 | INFO     | monitor loop #440: job 0:6746473133 is in state 'finished'
[2025-07-27 11:01:09] 2025-07-27 15:00:28,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 11:01:09] 2025-07-27 15:00:29,019 | INFO     | PID=3190386 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 11:01:09] 2025-07-27 15:00:29,019 | INFO     | .. there are 15 such processes running
[2025-07-27 11:01:09] 2025-07-27 15:00:29,426 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 11:01:09] 2025-07-27 15:00:30,608 | INFO     | monitor loop #441: job 0:6746473133 is in state 'finished'
[2025-07-27 11:01:09] 2025-07-27 15:00:30,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 11:01:09] 2025-07-27 15:00:31,149 | INFO     | job 6746473133 has state=finished
[2025-07-27 11:01:09] 2025-07-27 15:00:31,149 | INFO     | preparing for final server update for job 6746473133 in state='finished'
[2025-07-27 11:01:09] 2025-07-27 15:00:31,149 | INFO     | this job has now completed (state=finished)
[2025-07-27 11:01:09] 2025-07-27 15:00:31,149 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 11:01:09] 2025-07-27 15:00:31,149 | INFO     | log transfer has been attempted: DONE
[2025-07-27 11:01:09] 2025-07-27 15:00:31,149 | INFO     | job 6746473133 has finished - writing final server update
[2025-07-27 11:01:09] 2025-07-27 15:00:31,150 | INFO     | total number of processed events: 400 (read)
[2025-07-27 11:01:09] 2025-07-27 15:00:31,151 | INFO     | executing command: lscpu
[2025-07-27 11:01:09] 2025-07-27 15:00:31,215 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 11:01:09] 2025-07-27 15:00:33,112 | INFO     | monitor loop #442: job 0:6746473133 is in state 'finished'
[2025-07-27 11:01:09] 2025-07-27 15:00:33,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 11:01:09] 2025-07-27 15:00:35,617 | INFO     | monitor loop #443: job 0:6746473133 is in state 'finished'
[2025-07-27 11:01:09] 2025-07-27 15:00:35,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 11:01:09] 2025-07-27 15:00:37,277 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 11:01:09] 2025-07-27 15:00:37,284 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2955.287052083335
[2025-07-27 11:01:09] 2025-07-27 15:00:37,299 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746473133/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 11:01:09] 2025-07-27 15:00:37,300 | INFO     | extracted standard info from prmon json
[2025-07-27 11:01:09] 2025-07-27 15:00:37,300 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 11:01:09] 2025-07-27 15:00:37,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 11:01:09] 2025-07-27 15:00:37,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 11:01:09] 2025-07-27 15:00:37,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 11:01:09] 2025-07-27 15:00:37,302 | INFO     | fitting pss+swap vs Time
[2025-07-27 11:01:09] 2025-07-27 15:00:37,302 | INFO     | sum of square deviations: 233641590.0
[2025-07-27 11:01:09] 2025-07-27 15:00:37,303 | INFO     | sum of deviations: -13383501260.0
[2025-07-27 11:01:09] 2025-07-27 15:00:37,303 | INFO     | mean x: 1753625503.0
[2025-07-27 11:01:09] 2025-07-27 15:00:37,303 | INFO     | mean y: 2625217.318681319
[2025-07-27 11:01:09] 2025-07-27 15:00:37,303 | INFO     | -- intersect: 100454129288.01361
[2025-07-27 11:01:09] 2025-07-27 15:00:37,303 | INFO     | intersect: 100454129288.01361
[2025-07-27 11:01:09] 2025-07-27 15:00:37,303 | INFO     | chi2: 0.042959547898674996
[2025-07-27 11:01:09] 2025-07-27 15:00:37,303 | INFO     | -- intersect: 100454129288.01361
[2025-07-27 11:01:09] 2025-07-27 15:00:37,303 | INFO     | current memory leak: -57.28 B/s (using 91 data points, chi2=0.04)
[2025-07-27 11:01:09] 2025-07-27 15:00:37,304 | INFO     | could have reported an average CPU frequency of 2928 MHz (7 samples)
[2025-07-27 11:01:09] 2025-07-27 15:00:37,304 | INFO     | ..............................
[2025-07-27 11:01:09] 2025-07-27 15:00:37,304 | INFO     | . Timing measurements:
[2025-07-27 11:01:09] 2025-07-27 15:00:37,304 | INFO     | . get job = 0 s
[2025-07-27 11:01:09] 2025-07-27 15:00:37,304 | INFO     | . initial setup = 2 s
[2025-07-27 11:01:09] 2025-07-27 15:00:37,304 | INFO     | . payload setup = 10 s
[2025-07-27 11:01:09] 2025-07-27 15:00:37,304 | INFO     | . stage-in = 0 s
[2025-07-27 11:01:09] 2025-07-27 15:00:37,304 | INFO     | . payload execution = 5976 s
[2025-07-27 11:01:09] 2025-07-27 15:00:37,304 | INFO     | . stage-out = 0 s
[2025-07-27 11:01:09] 2025-07-27 15:00:37,304 | INFO     | . log creation = 0 s
[2025-07-27 11:01:09] 2025-07-27 15:00:37,304 | INFO     | ..............................
[2025-07-27 11:01:09] 2025-07-27 15:00:37,383 | INFO     | 
[2025-07-27 11:01:09] 2025-07-27 15:00:37,383 | INFO     | job summary report
[2025-07-27 11:01:09] 2025-07-27 15:00:37,383 | INFO     | --------------------------------------------------
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | PanDA job id: 6746473133
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | task id: 45759781
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | errors: (none)
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | pilot state: finished 
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | transexitcode: 0
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | exeerrorcode: 0
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | exeerrordiag: 
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | exitcode: 0
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | exitmsg: OK
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | cpuconsumptiontime: 44370 s
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | nevents: 400
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | neventsw: 0
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | pid: 3196906
[2025-07-27 11:01:09] 2025-07-27 15:00:37,384 | INFO     | pgrp: 3196906
[2025-07-27 11:01:09] 2025-07-27 15:00:37,385 | INFO     | corecount: 8
[2025-07-27 11:01:09] 2025-07-27 15:00:37,385 | INFO     | event service: False
[2025-07-27 11:01:09] 2025-07-27 15:00:37,385 | INFO     | sizes: {0: 2397297, 1: 2397496, 8: 2397758, 11: 2397786, 5991: 2424404, 5992: 2433402, 5994: 2433586, 6002: 2433780}
[2025-07-27 11:01:09] 2025-07-27 15:00:37,385 | INFO     | --------------------------------------------------
[2025-07-27 11:01:09] 2025-07-27 15:00:37,385 | INFO     | 
[2025-07-27 11:01:09] 2025-07-27 15:00:37,385 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 11:01:09] 2025-07-27 15:00:37,406 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,408 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 11:01:09] 2025-07-27 15:00:37,408 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,408 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 11:01:09] 2025-07-27 15:00:37,408 | INFO     | job 6746473133 has completed (purged errors)
[2025-07-27 11:01:09] 2025-07-27 15:00:37,408 | INFO     | overall cleanup function is called
[2025-07-27 11:01:09] 2025-07-27 15:00:38,412 | INFO     | --- collectZombieJob: --- 10, [3196906]
[2025-07-27 11:01:09] 2025-07-27 15:00:38,413 | INFO     | zombie collector waiting for pid 3196906
[2025-07-27 11:01:09] 2025-07-27 15:00:38,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 11:01:09] 2025-07-27 15:00:38,413 | INFO     | collected zombie processes
[2025-07-27 11:01:09] 2025-07-27 15:00:38,413 | INFO     | will attempt to kill all subprocesses of pid=3196906
[2025-07-27 11:01:09] 2025-07-27 15:00:38,771 | INFO     | process IDs to be killed: [3196906] (in reverse order)
[2025-07-27 11:01:09] 2025-07-27 15:00:38,878 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 11:01:09] 2025-07-27 15:00:38,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 11:01:09] 2025-07-27 15:00:38,893 | INFO     | did not find any defunct processes belonging to 3196906
[2025-07-27 11:01:09] 2025-07-27 15:00:38,908 | INFO     | did not find any defunct processes belonging to 3196906
[2025-07-27 11:01:09] 2025-07-27 15:00:38,909 | INFO     | ready for new job
[2025-07-27 11:01:09] 2025-07-27 15:00:38,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 11:01:09] 2025-07-27 15:00:38,911 | INFO     | ***************************************
[2025-07-27 11:01:09] 2025-07-27 15:00:38,912 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 11:01:09] 2025-07-27 15:00:38,912 | INFO     | ***************************************
[2025-07-27 11:01:09] 2025-07-27 15:00:38,912 | INFO     | 
[2025-07-27 11:01:09] 2025-07-27 15:00:38,917 | INFO     | architecture information:
[2025-07-27 11:01:09] 2025-07-27 15:00:38,918 | INFO     | executing command: cat /etc/os-release
[2025-07-27 11:01:09] 2025-07-27 15:00:38,936 | INFO     | cat /etc/os-release:
[2025-07-27 11:01:09] NAME="CentOS Linux"
[2025-07-27 11:01:09] VERSION="7 (Core)"
[2025-07-27 11:01:09] ID="centos"
[2025-07-27 11:01:09] ID_LIKE="rhel fedora"
[2025-07-27 11:01:09] VERSION_ID="7"
[2025-07-27 11:01:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 11:01:09] ANSI_COLOR="0;31"
[2025-07-27 11:01:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 11:01:09] HOME_URL="https://www.centos.org/"
[2025-07-27 11:01:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 11:01:09] 
[2025-07-27 11:01:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 11:01:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 11:01:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 11:01:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 11:01:09] 
[2025-07-27 11:01:09] 2025-07-27 15:00:38,937 | INFO     | ***************************************
[2025-07-27 11:01:09] 2025-07-27 15:00:39,439 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 11:01:09] 2025-07-27 15:00:39,462 | INFO     | sufficient remaining disk space (128855310336 B)
[2025-07-27 11:01:09] 2025-07-27 15:00:39,463 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 11:01:09] 2025-07-27 15:00:39,463 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 11:01:09] 2025-07-27 15:00:39,463 | INFO     | update_server=False
[2025-07-27 11:01:09] 2025-07-27 15:00:39,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 11:01:09] 2025-07-27 15:00:39,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:01:09] 2025-07-27 15:00:39,464 | INFO     | aborting loop
[2025-07-27 11:01:09] 2025-07-27 15:00:39,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 11:01:09] 2025-07-27 15:00:39,627 | INFO     | all data control threads have been joined
[2025-07-27 11:01:09] 2025-07-27 15:00:39,629 | INFO     | all job control threads have been joined
[2025-07-27 11:01:09] 2025-07-27 15:00:40,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 11:01:09] 2025-07-27 15:00:40,468 | INFO     | [job] retrieve thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:40,469 | INFO     | [job] job monitor thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:40,632 | INFO     | [data] control thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:40,635 | INFO     | [job] control thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:40,727 | INFO     | all payload control threads have been joined
[2025-07-27 11:01:09] 2025-07-27 15:00:40,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:40,804 | INFO     | [data] copytool_in thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:40,911 | INFO     | [job] validate thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:41,026 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:41,190 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:41,257 | INFO     | [payload] validate_post thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:41,632 | INFO     | [data] copytool_out thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:41,650 | INFO     | [payload] failed_post thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:41,732 | INFO     | [payload] control thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:41,785 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:42,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:01:09] 2025-07-27 15:00:43,403 | INFO     | [job] queue monitor thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:44,030 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 11:01:09] 2025-07-27 15:00:45,919 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220088194880)>', '<ExcThread(monitor, started 140219458246400)>']
[2025-07-27 11:01:09] 2025-07-27 15:00:50,946 | INFO     | all workflow threads have been joined
[2025-07-27 11:01:09] 2025-07-27 15:00:50,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 11:01:09] 2025-07-27 15:00:50,948 | INFO     | traces error code: 0
[2025-07-27 11:01:09] 2025-07-27 15:00:50,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 11:01:09] 2025-07-27 15:01:09,533 | INFO     | PID=3190386 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 11:01:09] 2025-07-27 15:01:09,533 | INFO     | .. there are 15 such processes running
[2025-07-27 11:01:09] 2025-07-27 15:01:09,534 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 11:01:09] 2025-07-27 15:01:09,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 11:01:09] 2025-07-27 15:01:09,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 11:01:09] 2025-07-27 15:01:09,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 11:01:09] 2025-07-27 15:01:09,534 | INFO     | [monitor] control thread has ended
[2025-07-27 11:01:09] 2025-07-27 15:01:09,674 [wrapper] ==== pilot stdout END ====
[2025-07-27 11:01:09] 2025-07-27 15:01:09,681 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 11:01:09] 2025-07-27 15:01:09,686 [wrapper] pilotpid: 3190386
[2025-07-27 11:01:09] 2025-07-27 15:01:09,690 [wrapper] Pilot exit status: 0
[2025-07-27 11:01:09] 2025-07-27 15:01:09,706 [wrapper] pandaids: 6746473133
[2025-07-27 11:01:09] 2025-07-27 15:01:09,810 [wrapper] cleanup supervisor_pilot 3341545 3190387
[2025-07-27 11:01:09] 2025-07-27 15:01:09,814 [wrapper] Test setup, not cleaning
[2025-07-27 11:01:09] 2025-07-27 15:01:09,819 [wrapper] apfmon messages muted
[2025-07-27 11:01:09] 2025-07-27 15:01:09,822 [wrapper] ==== wrapper stdout END ====
[2025-07-27 11:01:09] 2025-07-27 15:01:09,826 [wrapper] ==== wrapper stderr END ====
[2025-07-27 11:01:09]  *** Error codes and diagnostics ***
[2025-07-27 11:01:09]     "exeErrorCode": 0,
[2025-07-27 11:01:09]     "exeErrorDiag": "",
[2025-07-27 11:01:09]     "pilotErrorCode": 0,
[2025-07-27 11:01:09]     "pilotErrorDiag": "",
[2025-07-27 11:01:09]  *** Listing of results directory ***
[2025-07-27 11:01:09] total 408700
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 03:44 pilot3.tar.gz
[2025-07-27 11:01:09] -rwx------. 1 boincer umatlas     36292 Jul 27 03:52 runpilot2-wrapper.sh
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 03:52 queuedata.json
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas       100 Jul 27 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 11:01:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 09:20 run_atlas
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas       105 Jul 27 09:20 job.xml
[2025-07-27 11:01:09] -rw-r--r--. 2 boincer umatlas 237326828 Jul 27 09:20 EVNT.45759779._000003.pool.root.1
[2025-07-27 11:01:09] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:20 start_atlas.sh
[2025-07-27 11:01:09] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 09:20 shared
[2025-07-27 11:01:09] -rw-r--r--. 2 boincer umatlas    542885 Jul 27 09:20 input.tar.gz
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas         0 Jul 27 09:20 boinc_lockfile
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas      2561 Jul 27 09:20 pandaJob.out
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas    980117 Jul 27 09:20 agis_schedconf.cvmfs.json
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas   1593052 Jul 27 09:20 agis_ddmendpoints.agis.ALL.json
[2025-07-27 11:01:09] drwx------. 4 boincer umatlas      4096 Jul 27 09:20 pilot3
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 10:58 init_data.xml
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas 175537738 Jul 27 10:59 HITS.45759781._000055.pool.root.1
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas       529 Jul 27 11:00 boinc_task_state.xml
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas      1033 Jul 27 11:00 memory_monitor_summary.json
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas    308198 Jul 27 11:00 log.45759781._000055.job.log.tgz.1
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas        95 Jul 27 11:00 pilot_heartbeat.json
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas      7766 Jul 27 11:00 heartbeat.json
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 11:01 boinc_mmap_file
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas        27 Jul 27 11:01 wrapper_checkpoint.txt
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas       823 Jul 27 11:01 pilotlog.txt
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas    575098 Jul 27 11:01 log.45759781._000055.job.log.1
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas       357 Jul 27 11:01 output.list
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas       620 Jul 27 11:01 runtime_log
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas    901120 Jul 27 11:01 result.tar.gz
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 11:01 runtime_log.err
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas       652 Jul 27 11:01 oCTLDm6LB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3fULDmMrsfHn.diag
[2025-07-27 11:01:09] -rw-r--r--. 1 boincer umatlas     22021 Jul 27 11:01 stderr.txt
[2025-07-27 11:01:09] HITS file was successfully produced:
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas 175537738 Jul 27 10:59 shared/HITS.pool.root.1
[2025-07-27 11:01:09]  *** Contents of shared directory: ***
[2025-07-27 11:01:09] total 404628
[2025-07-27 11:01:09] -rw-r--r--. 2 boincer umatlas 237326828 Jul 27 09:20 ATLAS.root_0
[2025-07-27 11:01:09] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:20 start_atlas.sh
[2025-07-27 11:01:09] -rw-r--r--. 2 boincer umatlas    542885 Jul 27 09:20 input.tar.gz
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas 175537738 Jul 27 10:59 HITS.pool.root.1
[2025-07-27 11:01:09] -rw-------. 1 boincer umatlas    901120 Jul 27 11:01 result.tar.gz
11:01:11 (3186634): run_atlas exited; CPU time 44551.912740
11:01:11 (3186634): called boinc_finish(0)

</stderr_txt>
]]>

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