Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:29:34 (271685): wrapper (7.7.26015): starting
09:29:34 (271685): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 09:29:34] Arguments: --nthreads 10
[2025-07-27 09:29:34] Threads: 10
[2025-07-27 09:29:34] Checking for CVMFS
[2025-07-27 09:29:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:29:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:29:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:29:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:29:34] 2.12.6.0 71612 27324 464844 148813 3 195 19476977 21042176 10888 16776704 0 68306186 99.090 155381952 30721 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 09:29:34] CVMFS is ok
[2025-07-27 09:29:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 09:29:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 09:29:34] Further information can be found at the LHC@home message board.
[2025-07-27 09:29:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:29:34] Checking for apptainer binary...
[2025-07-27 09:29:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:29:34] Running /usr/bin/apptainer --version
[2025-07-27 09:29:34] apptainer version 1.4.1-1.el9
[2025-07-27 09:29:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:29:34] c-16-16.aglt2.org
[2025-07-27 09:29:34] apptainer works
[2025-07-27 09:29:35] Set ATHENA_PROC_NUMBER=10
[2025-07-27 09:29:35] Set ATHENA_CORE_NUMBER=10
[2025-07-27 09:29:35] Starting ATLAS job with PandaID=6746446350
[2025-07-27 09:29:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:18:10]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:18:10] 2025-07-28 00:17:35,670 | INFO     | PID=276687 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:18:10] 2025-07-28 00:17:35,671 | INFO     | .. there are 10 such processes running
[2025-07-27 20:18:10] 2025-07-28 00:17:36,254 | INFO     | monitor loop #1864: job 0:6746446350 is in state 'finished'
[2025-07-27 20:18:10] 2025-07-28 00:17:36,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:18:10] 2025-07-28 00:17:37,243 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 20:18:10] 2025-07-28 00:17:37,252 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2909.8355250000004
[2025-07-27 20:18:10] 2025-07-28 00:17:37,266 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746446350/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:18:10] 2025-07-28 00:17:37,267 | INFO     | extracted standard info from prmon json
[2025-07-27 20:18:10] 2025-07-28 00:17:37,268 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:18:10] 2025-07-28 00:17:37,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:18:10] 2025-07-28 00:17:37,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:18:10] 2025-07-28 00:17:37,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:18:10] 2025-07-28 00:17:37,285 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:18:10] 2025-07-28 00:17:37,287 | INFO     | sum of square deviations: 80144080071.11786
[2025-07-27 20:18:10] 2025-07-28 00:17:37,301 | INFO     | sum of deviations: 5288943587.786522
[2025-07-27 20:18:10] 2025-07-28 00:17:37,301 | INFO     | mean x: 1753642417.1365776
[2025-07-27 20:18:10] 2025-07-28 00:17:37,302 | INFO     | mean y: 2256216.2323390893
[2025-07-27 20:18:10] 2025-07-28 00:17:37,302 | INFO     | -- intersect: -113471805.21546629
[2025-07-27 20:18:10] 2025-07-28 00:17:37,302 | INFO     | intersect: -113471805.21546629
[2025-07-27 20:18:10] 2025-07-28 00:17:37,303 | INFO     | chi2: 2.8703329112637057
[2025-07-27 20:18:10] 2025-07-28 00:17:37,304 | INFO     | sum of square deviations: 78271744844.6077
[2025-07-27 20:18:10] 2025-07-28 00:17:37,316 | INFO     | sum of deviations: 41771505512.22778
[2025-07-27 20:18:10] 2025-07-28 00:17:37,316 | INFO     | mean x: 1753642264.6455696
[2025-07-27 20:18:10] 2025-07-28 00:17:37,320 | INFO     | mean y: 2259169.1170886075
[2025-07-27 20:18:10] 2025-07-28 00:17:37,320 | INFO     | -- intersect: -933612104.3487735
[2025-07-27 20:18:10] 2025-07-28 00:17:37,321 | INFO     | intersect: -933612104.3487735
[2025-07-27 20:18:10] 2025-07-28 00:17:37,322 | INFO     | chi2: 2.2055286381135697
[2025-07-27 20:18:10] 2025-07-28 00:17:37,322 | INFO     | current chi2=2.2055286381135697 (change=23.16122532481594 %)
[2025-07-27 20:18:10] 2025-07-28 00:17:37,322 | INFO     | right removable region: 631
[2025-07-27 20:18:10] 2025-07-28 00:17:37,323 | INFO     | sum of square deviations: 78271303204.60767
[2025-07-27 20:18:10] 2025-07-28 00:17:37,337 | INFO     | sum of deviations: -88029784705.92416
[2025-07-27 20:18:10] 2025-07-28 00:17:37,337 | INFO     | mean x: 1753642569.6455696
[2025-07-27 20:18:10] 2025-07-28 00:17:37,337 | INFO     | mean y: 2263793.5806962023
[2025-07-27 20:18:10] 2025-07-28 00:17:37,338 | INFO     | -- intersect: 1974541902.3723676
[2025-07-27 20:18:10] 2025-07-28 00:17:37,338 | INFO     | intersect: 1974541902.3723676
[2025-07-27 20:18:10] 2025-07-28 00:17:37,339 | INFO     | chi2: 1.4600878015910415
[2025-07-27 20:18:10] 2025-07-28 00:17:37,339 | INFO     | current chi2=1.4600878015910415 (change=49.13176113260616 %)
[2025-07-27 20:18:10] 2025-07-28 00:17:37,340 | INFO     | sum of square deviations: 76427922237.99355
[2025-07-27 20:18:10] 2025-07-28 00:17:37,351 | INFO     | sum of deviations: -101340297929.62674
[2025-07-27 20:18:10] 2025-07-28 00:17:37,351 | INFO     | mean x: 1753642722.154705
[2025-07-27 20:18:10] 2025-07-28 00:17:37,351 | INFO     | mean y: 2264892.449760766
[2025-07-27 20:18:10] 2025-07-28 00:17:37,352 | INFO     | -- intersect: 2327523393.811121
[2025-07-27 20:18:10] 2025-07-28 00:17:37,352 | INFO     | intersect: 2327523393.811121
[2025-07-27 20:18:10] 2025-07-28 00:17:37,353 | INFO     | chi2: 1.428798945140215
[2025-07-27 20:18:10] 2025-07-28 00:17:37,353 | INFO     | current chi2=1.428798945140215 (change=2.142943487147235 %)
[2025-07-27 20:18:10] 2025-07-28 00:17:37,353 | INFO     | left removable region: 20
[2025-07-27 20:18:10] 2025-07-28 00:17:37,354 | INFO     | sum of square deviations: 70724654142.91
[2025-07-27 20:18:10] 2025-07-28 00:17:37,365 | INFO     | sum of deviations: -19624348453.42886
[2025-07-27 20:18:10] 2025-07-28 00:17:37,365 | INFO     | mean x: 1753642844.1767595
[2025-07-27 20:18:10] 2025-07-28 00:17:37,366 | INFO     | mean y: 2263971.0965630114
[2025-07-27 20:18:10] 2025-07-28 00:17:37,366 | INFO     | -- intersect: 488856640.2872503
[2025-07-27 20:18:10] 2025-07-28 00:17:37,366 | INFO     | intersect: 488856640.2872503
[2025-07-27 20:18:10] 2025-07-28 00:17:37,367 | INFO     | chi2: 0.6556858702560843
[2025-07-27 20:18:10] 2025-07-28 00:17:37,367 | INFO     | -- intersect: 488856640.2872503
[2025-07-27 20:18:10] 2025-07-28 00:17:37,367 | INFO     | current memory leak: -0.28 B/s (using 611 data points, chi2=0.66)
[2025-07-27 20:18:10] 2025-07-28 00:17:37,368 | INFO     | could have reported an average CPU frequency of 2911 MHz (24 samples)
[2025-07-27 20:18:10] 2025-07-28 00:17:37,369 | INFO     | ..............................
[2025-07-27 20:18:10] 2025-07-28 00:17:37,369 | INFO     | . Timing measurements:
[2025-07-27 20:18:10] 2025-07-28 00:17:37,369 | INFO     | . get job = 0 s
[2025-07-27 20:18:10] 2025-07-28 00:17:37,369 | INFO     | . initial setup = 3 s
[2025-07-27 20:18:10] 2025-07-28 00:17:37,369 | INFO     | . payload setup = 8 s
[2025-07-27 20:18:10] 2025-07-28 00:17:37,369 | INFO     | . stage-in = 0 s
[2025-07-27 20:18:10] 2025-07-28 00:17:37,369 | INFO     | . payload execution = 38826 s
[2025-07-27 20:18:10] 2025-07-28 00:17:37,370 | INFO     | . stage-out = 3 s
[2025-07-27 20:18:10] 2025-07-28 00:17:37,370 | INFO     | . log creation = 0 s
[2025-07-27 20:18:10] 2025-07-28 00:17:37,370 | INFO     | ..............................
[2025-07-27 20:18:10] 2025-07-28 00:17:37,528 | INFO     | 
[2025-07-27 20:18:10] 2025-07-28 00:17:37,529 | INFO     | job summary report
[2025-07-27 20:18:10] 2025-07-28 00:17:37,529 | INFO     | --------------------------------------------------
[2025-07-27 20:18:10] 2025-07-28 00:17:37,529 | INFO     | PanDA job id: 6746446350
[2025-07-27 20:18:10] 2025-07-28 00:17:37,529 | INFO     | task id: 45759100
[2025-07-27 20:18:10] 2025-07-28 00:17:37,529 | INFO     | errors: (none)
[2025-07-27 20:18:10] 2025-07-28 00:17:37,529 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:18:10] 2025-07-28 00:17:37,530 | INFO     | pilot state: finished 
[2025-07-27 20:18:10] 2025-07-28 00:17:37,530 | INFO     | transexitcode: 0
[2025-07-27 20:18:10] 2025-07-28 00:17:37,530 | INFO     | exeerrorcode: 0
[2025-07-27 20:18:10] 2025-07-28 00:17:37,530 | INFO     | exeerrordiag: 
[2025-07-27 20:18:10] 2025-07-28 00:17:37,530 | INFO     | exitcode: 0
[2025-07-27 20:18:10] 2025-07-28 00:17:37,530 | INFO     | exitmsg: OK
[2025-07-27 20:18:10] 2025-07-28 00:17:37,531 | INFO     | cpuconsumptiontime: 118424 s
[2025-07-27 20:18:10] 2025-07-28 00:17:37,531 | INFO     | nevents: 400
[2025-07-27 20:18:10] 2025-07-28 00:17:37,531 | INFO     | neventsw: 0
[2025-07-27 20:18:10] 2025-07-28 00:17:37,531 | INFO     | pid: 284150
[2025-07-27 20:18:10] 2025-07-28 00:17:37,531 | INFO     | pgrp: 284150
[2025-07-27 20:18:10] 2025-07-28 00:17:37,531 | INFO     | corecount: 10
[2025-07-27 20:18:10] 2025-07-28 00:17:37,531 | INFO     | event service: False
[2025-07-27 20:18:10] 2025-07-28 00:17:37,532 | INFO     | sizes: {0: 2397239, 1: 2397494, 2: 2397494, 6: 2397784, 12: 2397812, 38838: 2438346, 38842: 2447344, 38844: 2447400, 38853: 2447594}
[2025-07-27 20:18:10] 2025-07-28 00:17:37,532 | INFO     | --------------------------------------------------
[2025-07-27 20:18:10] 2025-07-28 00:17:37,532 | INFO     | 
[2025-07-27 20:18:10] 2025-07-28 00:17:37,532 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:18:10] 2025-07-28 00:17:37,553 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,554 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,554 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,554 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,557 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:18:10] 2025-07-28 00:17:37,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:18:10] 2025-07-28 00:17:37,557 | INFO     | job 6746446350 has completed (purged errors)
[2025-07-27 20:18:10] 2025-07-28 00:17:37,557 | INFO     | overall cleanup function is called
[2025-07-27 20:18:10] 2025-07-28 00:17:38,567 | INFO     | --- collectZombieJob: --- 10, [284150]
[2025-07-27 20:18:10] 2025-07-28 00:17:38,568 | INFO     | zombie collector waiting for pid 284150
[2025-07-27 20:18:10] 2025-07-28 00:17:38,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:18:10] 2025-07-28 00:17:38,568 | INFO     | collected zombie processes
[2025-07-27 20:18:10] 2025-07-28 00:17:38,568 | INFO     | will attempt to kill all subprocesses of pid=284150
[2025-07-27 20:18:10] 2025-07-28 00:17:38,950 | INFO     | process IDs to be killed: [284150] (in reverse order)
[2025-07-27 20:18:10] 2025-07-28 00:17:39,062 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:18:10] 2025-07-28 00:17:39,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:18:10] 2025-07-28 00:17:39,079 | INFO     | did not find any defunct processes belonging to 284150
[2025-07-27 20:18:10] 2025-07-28 00:17:39,098 | INFO     | did not find any defunct processes belonging to 284150
[2025-07-27 20:18:10] 2025-07-28 00:17:39,099 | INFO     | ready for new job
[2025-07-27 20:18:10] 2025-07-28 00:17:39,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:18:10] 2025-07-28 00:17:39,102 | INFO     | ***************************************
[2025-07-27 20:18:10] 2025-07-28 00:17:39,103 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:18:10] 2025-07-28 00:17:39,103 | INFO     | ***************************************
[2025-07-27 20:18:10] 2025-07-28 00:17:39,103 | INFO     | 
[2025-07-27 20:18:10] 2025-07-28 00:17:39,119 | INFO     | architecture information:
[2025-07-27 20:18:10] 2025-07-28 00:17:39,120 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:18:10] 2025-07-28 00:17:39,136 | INFO     | cat /etc/os-release:
[2025-07-27 20:18:10] NAME="CentOS Linux"
[2025-07-27 20:18:10] VERSION="7 (Core)"
[2025-07-27 20:18:10] ID="centos"
[2025-07-27 20:18:10] ID_LIKE="rhel fedora"
[2025-07-27 20:18:10] VERSION_ID="7"
[2025-07-27 20:18:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:18:10] ANSI_COLOR="0;31"
[2025-07-27 20:18:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:18:10] HOME_URL="https://www.centos.org/"
[2025-07-27 20:18:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:18:10] 
[2025-07-27 20:18:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:18:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:18:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:18:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:18:10] 
[2025-07-27 20:18:10] 2025-07-28 00:17:39,136 | INFO     | ***************************************
[2025-07-27 20:18:10] 2025-07-28 00:17:39,639 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:18:10] 2025-07-28 00:17:39,661 | INFO     | sufficient remaining disk space (53838086144 B)
[2025-07-27 20:18:10] 2025-07-28 00:17:39,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:18:10] 2025-07-28 00:17:39,662 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:18:10] 2025-07-28 00:17:39,662 | INFO     | update_server=False
[2025-07-27 20:18:10] 2025-07-28 00:17:39,662 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:18:10] 2025-07-28 00:17:39,662 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:18:10] 2025-07-28 00:17:39,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:18:10] 2025-07-28 00:17:39,740 | INFO     | all data control threads have been joined
[2025-07-27 20:18:10] 2025-07-28 00:17:39,770 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:18:10] 2025-07-28 00:17:39,771 | INFO     | aborting loop
[2025-07-27 20:18:10] 2025-07-28 00:17:40,667 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:40,702 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:40,746 | INFO     | [data] control thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:40,776 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:40,993 | INFO     | all payload control threads have been joined
[2025-07-27 20:18:10] 2025-07-28 00:17:41,134 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:41,248 | INFO     | all job control threads have been joined
[2025-07-27 20:18:10] 2025-07-28 00:17:41,357 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:41,378 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:41,552 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:41,669 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:41,997 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:41,998 | INFO     | [payload] control thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:42,020 | INFO     | [job] validate thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:42,141 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:42,255 | INFO     | [job] control thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:42,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:18:10] 2025-07-28 00:17:43,545 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:43,679 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:18:10] 2025-07-28 00:17:45,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620505954112)>', '<ExcThread(monitor, started 140620014270208)>']
[2025-07-27 20:18:10] 2025-07-28 00:17:50,255 | INFO     | all workflow threads have been joined
[2025-07-27 20:18:10] 2025-07-28 00:17:50,256 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:18:10] 2025-07-28 00:17:50,257 | INFO     | traces error code: 0
[2025-07-27 20:18:10] 2025-07-28 00:17:50,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:18:10] 2025-07-28 00:18:10,206 | INFO     | PID=276687 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 20:18:10] 2025-07-28 00:18:10,206 | INFO     | .. there are 10 such processes running
[2025-07-27 20:18:10] 2025-07-28 00:18:10,207 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:18:10] 2025-07-28 00:18:10,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:18:10] 2025-07-28 00:18:10,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:18:10] 2025-07-28 00:18:10,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:18:10] 2025-07-28 00:18:10,208 | INFO     | [monitor] control thread has ended
[2025-07-27 20:18:10] 2025-07-28 00:18:10,403 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:18:10] 2025-07-28 00:18:10,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:18:10] 2025-07-28 00:18:10,419 [wrapper] pilotpid: 276687
[2025-07-27 20:18:10] 2025-07-28 00:18:10,423 [wrapper] Pilot exit status: 0
[2025-07-27 20:18:10] 2025-07-28 00:18:10,438 [wrapper] pandaids: 6746446350
[2025-07-27 20:18:10] 2025-07-28 00:18:10,516 [wrapper] cleanup supervisor_pilot 2411775 276688
[2025-07-27 20:18:10] 2025-07-28 00:18:10,520 [wrapper] Test setup, not cleaning
[2025-07-27 20:18:10] 2025-07-28 00:18:10,524 [wrapper] apfmon messages muted
[2025-07-27 20:18:10] 2025-07-28 00:18:10,528 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:18:10] 2025-07-28 00:18:10,533 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:18:10]  *** Error codes and diagnostics ***
[2025-07-27 20:18:10]     "exeErrorCode": 0,
[2025-07-27 20:18:10]     "exeErrorDiag": "",
[2025-07-27 20:18:10]     "pilotErrorCode": 0,
[2025-07-27 20:18:10]     "pilotErrorDiag": "",
[2025-07-27 20:18:10]  *** Listing of results directory ***
[2025-07-27 20:18:10] total 408564
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 03:44 pilot3.tar.gz
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 03:46 queuedata.json
[2025-07-27 20:18:10] -rwx------. 1 boincer umatlas     36292 Jul 27 03:47 runpilot2-wrapper.sh
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas       100 Jul 27 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:18:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 09:29 run_atlas
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas       105 Jul 27 09:29 job.xml
[2025-07-27 20:18:10] -rw-r--r--. 2 boincer umatlas 232508862 Jul 27 09:29 EVNT.45759097._000004.pool.root.1
[2025-07-27 20:18:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:29 start_atlas.sh
[2025-07-27 20:18:10] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 09:29 shared
[2025-07-27 20:18:10] -rw-r--r--. 2 boincer umatlas    542874 Jul 27 09:29 input.tar.gz
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas         0 Jul 27 09:29 boinc_lockfile
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas      2559 Jul 27 09:29 pandaJob.out
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas    980117 Jul 27 09:29 agis_schedconf.cvmfs.json
[2025-07-27 20:18:10] drwx------. 4 boincer umatlas      4096 Jul 27 09:29 pilot3
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas      6525 Jul 27 20:13 init_data.xml
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas 175490079 Jul 27 20:16 HITS.45759100._000096.pool.root.1
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas       532 Jul 27 20:16 boinc_task_state.xml
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas      1037 Jul 27 20:17 memory_monitor_summary.json
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:17 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas    612248 Jul 27 20:17 log.45759100._000096.job.log.tgz.1
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas      7807 Jul 27 20:17 heartbeat.json
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:17 boinc_mmap_file
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas        29 Jul 27 20:17 wrapper_checkpoint.txt
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas        95 Jul 27 20:18 pilot_heartbeat.json
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas       822 Jul 27 20:18 pilotlog.txt
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas   2637183 Jul 27 20:18 log.45759100._000096.job.log.1
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas       357 Jul 27 20:18 output.list
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:18 runtime_log
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas   3266560 Jul 27 20:18 result.tar.gz
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas       659 Jul 27 20:18 WJnMDmvHB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRfULDmXmEfcn.diag
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas      8658 Jul 27 20:18 runtime_log.err
[2025-07-27 20:18:10] -rw-r--r--. 1 boincer umatlas     21313 Jul 27 20:18 stderr.txt
[2025-07-27 20:18:10] HITS file was successfully produced:
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas 175490079 Jul 27 20:16 shared/HITS.pool.root.1
[2025-07-27 20:18:10]  *** Contents of shared directory: ***
[2025-07-27 20:18:10] total 402184
[2025-07-27 20:18:10] -rw-r--r--. 2 boincer umatlas 232508862 Jul 27 09:29 ATLAS.root_0
[2025-07-27 20:18:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:29 start_atlas.sh
[2025-07-27 20:18:10] -rw-r--r--. 2 boincer umatlas    542874 Jul 27 09:29 input.tar.gz
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas 175490079 Jul 27 20:16 HITS.pool.root.1
[2025-07-27 20:18:10] -rw-------. 1 boincer umatlas   3266560 Jul 27 20:18 result.tar.gz
20:18:11 (271685): run_atlas exited; CPU time 120024.065520
20:18:11 (271685): called boinc_finish(0)

</stderr_txt>
]]>

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