Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:31:21 (1257330): wrapper (7.7.26015): starting
05:31:21 (1257330): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 05:31:21] Arguments: --nthreads 12
[2025-07-28 05:31:21] Threads: 12
[2025-07-28 05:31:21] Checking for CVMFS
[2025-07-28 05:31:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 05:31:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 05:31:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 05:31:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 05:31:21] 2.13.1.0 1072336 8865 82108 148834 3 56 2233561 4097025 0 130560 0 10908968 99.988 324762 7440 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-28 05:31:21] CVMFS is ok
[2025-07-28 05:31:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 05:31:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 05:31:21] Further information can be found at the LHC@home message board.
[2025-07-28 05:31:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 05:31:21] Checking for apptainer binary...
[2025-07-28 05:31:21] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-28 05:31:21] apptainer is not installed, using version from CVMFS
[2025-07-28 05:31:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 05:31:22] pckelar2.cern.ch
[2025-07-28 05:31:22] apptainer works
[2025-07-28 05:31:22] Set ATHENA_PROC_NUMBER=12
[2025-07-28 05:31:22] Set ATHENA_CORE_NUMBER=12
[2025-07-28 05:31:22] Starting ATLAS job with PandaID=6746446295
[2025-07-28 05:31:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 06:31:08]  *** The last 200 lines of the pilot log: ***
[2025-07-28 06:31:08]  protocol_id=None
[2025-07-28 06:31:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 06:31:08]  replicas=None
[2025-07-28 06:31:08]  scope=mc23_13p6TeV
[2025-07-28 06:31:08]  status=None
[2025-07-28 06:31:08]  status_code=0
[2025-07-28 06:31:08]  storage_token=
[2025-07-28 06:31:08]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6746446295/log.45759100._000041.job.log.tgz.1
[2025-07-28 06:31:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/5f/log.45759100._000041.job.log.tgz.1
[2025-07-28 06:31:08]  workdir=None
[2025-07-28 06:31:08] ]
[2025-07-28 06:31:08] 2025-07-28 04:30:26,647 | INFO     | transferring file log.45759100._000041.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6746446295/log.45759100._000041.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 06:31:08] 2025-07-28 04:30:26,648 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6746446295/log.45759100._000041.job.log.tgz.1 /var/lib/boinc/slots/0/log.45759100._000041.job
[2025-07-28 06:31:08] 2025-07-28 04:30:26,660 | INFO     | adding to output.list: log.45759100._000041.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/5f/log.45759100._000041.job.log.tg
[2025-07-28 06:31:08] 2025-07-28 04:30:26,660 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 06:31:08] 2025-07-28 04:30:26,660 | INFO     | summary of transferred files:
[2025-07-28 06:31:08] 2025-07-28 04:30:26,660 | INFO     |  -- lfn=log.45759100._000041.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 06:31:08] 2025-07-28 04:30:26,661 | INFO     | stage-out finished correctly
[2025-07-28 06:31:08] 2025-07-28 04:30:28,120 | INFO     | monitor loop #275: job 0:6746446295 is in state 'finished'
[2025-07-28 06:31:08] 2025-07-28 04:30:28,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:31:08] 2025-07-28 04:30:30,054 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 06:31:08] 2025-07-28 04:30:30,623 | INFO     | monitor loop #276: job 0:6746446295 is in state 'finished'
[2025-07-28 06:31:08] 2025-07-28 04:30:30,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:31:08] 2025-07-28 04:30:31,700 | INFO     | job 6746446295 has state=finished
[2025-07-28 06:31:08] 2025-07-28 04:30:31,700 | INFO     | preparing for final server update for job 6746446295 in state='finished'
[2025-07-28 06:31:08] 2025-07-28 04:30:31,701 | INFO     | this job has now completed (state=finished)
[2025-07-28 06:31:08] 2025-07-28 04:30:31,701 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 06:31:08] 2025-07-28 04:30:31,701 | INFO     | log transfer has been attempted: DONE
[2025-07-28 06:31:08] 2025-07-28 04:30:31,701 | INFO     | job 6746446295 has finished - writing final server update
[2025-07-28 06:31:08] 2025-07-28 04:30:31,701 | INFO     | total number of processed events: 400 (read)
[2025-07-28 06:31:08] 2025-07-28 04:30:31,702 | INFO     | executing command: lscpu
[2025-07-28 06:31:08] 2025-07-28 04:30:31,725 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 06:31:08] 2025-07-28 04:30:33,126 | INFO     | monitor loop #277: job 0:6746446295 is in state 'finished'
[2025-07-28 06:31:08] 2025-07-28 04:30:33,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:31:08] 2025-07-28 04:30:33,871 | INFO     | PID=1261078 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 06:31:08] 2025-07-28 04:30:35,629 | INFO     | monitor loop #278: job 0:6746446295 is in state 'finished'
[2025-07-28 06:31:08] 2025-07-28 04:30:35,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 06:31:08] 2025-07-28 04:30:36,154 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 06:31:08] 2025-07-28 04:30:36,157 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2783.9915000000005
[2025-07-28 06:31:08] 2025-07-28 04:30:36,159 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6746446295/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 06:31:08] 2025-07-28 04:30:36,159 | INFO     | extracted standard info from prmon json
[2025-07-28 06:31:08] 2025-07-28 04:30:36,159 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 06:31:08] 2025-07-28 04:30:36,159 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 06:31:08] 2025-07-28 04:30:36,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 06:31:08] 2025-07-28 04:30:36,160 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 06:31:08] 2025-07-28 04:30:36,160 | INFO     | fitting pss+swap vs Time
[2025-07-28 06:31:08] 2025-07-28 04:30:36,160 | INFO     | sum of square deviations: 41117050.0
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | sum of deviations: -7745404117.999999
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | mean x: 1753675341.0
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | mean y: 2993268.745098039
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | -- intersect: 330350725117.612
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | intersect: 330350725117.612
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | chi2: 0.07547754711443476
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | -- intersect: 330350725117.612
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | current memory leak: -188.37 B/s (using 51 data points, chi2=0.08)
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | could have reported an average CPU frequency of 2536 MHz (5 samples)
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | ..............................
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | . Timing measurements:
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | . get job = 0 s
[2025-07-28 06:31:08] 2025-07-28 04:30:36,161 | INFO     | . initial setup = 1 s
[2025-07-28 06:31:08] 2025-07-28 04:30:36,162 | INFO     | . payload setup = 5 s
[2025-07-28 06:31:08] 2025-07-28 04:30:36,162 | INFO     | . stage-in = 0 s
[2025-07-28 06:31:08] 2025-07-28 04:30:36,162 | INFO     | . payload execution = 3514 s
[2025-07-28 06:31:08] 2025-07-28 04:30:36,162 | INFO     | . stage-out = 0 s
[2025-07-28 06:31:08] 2025-07-28 04:30:36,162 | INFO     | . log creation = 0 s
[2025-07-28 06:31:08] 2025-07-28 04:30:36,162 | INFO     | ..............................
[2025-07-28 06:31:08] 2025-07-28 04:30:36,640 | INFO     | 
[2025-07-28 06:31:08] 2025-07-28 04:30:36,640 | INFO     | job summary report
[2025-07-28 06:31:08] 2025-07-28 04:30:36,640 | INFO     | --------------------------------------------------
[2025-07-28 06:31:08] 2025-07-28 04:30:36,640 | INFO     | PanDA job id: 6746446295
[2025-07-28 06:31:08] 2025-07-28 04:30:36,640 | INFO     | task id: 45759100
[2025-07-28 06:31:08] 2025-07-28 04:30:36,640 | INFO     | errors: (none)
[2025-07-28 06:31:08] 2025-07-28 04:30:36,640 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 06:31:08] 2025-07-28 04:30:36,640 | INFO     | pilot state: finished 
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | transexitcode: 0
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | exeerrorcode: 0
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | exeerrordiag: 
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | exitcode: 0
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | exitmsg: OK
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | cpuconsumptiontime: 38965 s
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | nevents: 400
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | neventsw: 0
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | pid: 1268324
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | pgrp: 1268324
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | corecount: 12
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | event service: False
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | sizes: {0: 2397467, 3: 2397729, 11: 2397757, 3524: 2432474, 3528: 2432474, 3534: 2432700}
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | --------------------------------------------------
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | 
[2025-07-28 06:31:08] 2025-07-28 04:30:36,641 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 06:31:08] 2025-07-28 04:30:36,659 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,659 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,659 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,659 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 06:31:08] 2025-07-28 04:30:36,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,661 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 06:31:08] 2025-07-28 04:30:36,661 | INFO     | job 6746446295 has completed (purged errors)
[2025-07-28 06:31:08] 2025-07-28 04:30:36,661 | INFO     | overall cleanup function is called
[2025-07-28 06:31:08] 2025-07-28 04:30:37,668 | INFO     | --- collectZombieJob: --- 10, [1268324]
[2025-07-28 06:31:08] 2025-07-28 04:30:37,668 | INFO     | zombie collector waiting for pid 1268324
[2025-07-28 06:31:08] 2025-07-28 04:30:37,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 06:31:08] 2025-07-28 04:30:37,668 | INFO     | collected zombie processes
[2025-07-28 06:31:08] 2025-07-28 04:30:37,668 | INFO     | will attempt to kill all subprocesses of pid=1268324
[2025-07-28 06:31:08] 2025-07-28 04:30:37,745 | INFO     | process IDs to be killed: [1268324] (in reverse order)
[2025-07-28 06:31:08] 2025-07-28 04:30:37,776 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 06:31:08] 2025-07-28 04:30:37,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 06:31:08] 2025-07-28 04:30:37,778 | INFO     | did not find any defunct processes belonging to 1268324
[2025-07-28 06:31:08] 2025-07-28 04:30:37,779 | INFO     | did not find any defunct processes belonging to 1268324
[2025-07-28 06:31:08] 2025-07-28 04:30:37,779 | INFO     | ready for new job
[2025-07-28 06:31:08] 2025-07-28 04:30:37,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 06:31:08] 2025-07-28 04:30:37,780 | INFO     | ***************************************
[2025-07-28 06:31:08] 2025-07-28 04:30:37,781 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 06:31:08] 2025-07-28 04:30:37,781 | INFO     | ***************************************
[2025-07-28 06:31:08] 2025-07-28 04:30:37,781 | INFO     | 
[2025-07-28 06:31:08] 2025-07-28 04:30:37,781 | INFO     | architecture information:
[2025-07-28 06:31:08] 2025-07-28 04:30:37,782 | INFO     | executing command: cat /etc/os-release
[2025-07-28 06:31:08] 2025-07-28 04:30:37,791 | INFO     | cat /etc/os-release:
[2025-07-28 06:31:08] NAME="CentOS Linux"
[2025-07-28 06:31:08] VERSION="7 (Core)"
[2025-07-28 06:31:08] ID="centos"
[2025-07-28 06:31:08] ID_LIKE="rhel fedora"
[2025-07-28 06:31:08] VERSION_ID="7"
[2025-07-28 06:31:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 06:31:08] ANSI_COLOR="0;31"
[2025-07-28 06:31:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 06:31:08] HOME_URL="https://www.centos.org/"
[2025-07-28 06:31:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 06:31:08] 
[2025-07-28 06:31:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 06:31:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 06:31:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 06:31:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 06:31:08] 
[2025-07-28 06:31:08] 2025-07-28 04:30:37,791 | INFO     | ***************************************
[2025-07-28 06:31:08] 2025-07-28 04:30:38,294 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 06:31:08] 2025-07-28 04:30:38,305 | INFO     | sufficient remaining disk space (233011412992 B)
[2025-07-28 06:31:08] 2025-07-28 04:30:38,305 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 06:31:08] 2025-07-28 04:30:38,306 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 06:31:08] 2025-07-28 04:30:38,306 | INFO     | update_server=False
[2025-07-28 06:31:08] 2025-07-28 04:30:38,306 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 06:31:08] 2025-07-28 04:30:38,441 | INFO     | all data control threads have been joined
[2025-07-28 06:31:08] 2025-07-28 04:30:38,897 | INFO     | all job control threads have been joined
[2025-07-28 06:31:08] 2025-07-28 04:30:39,005 | INFO     | all payload control threads have been joined
[2025-07-28 06:31:08] 2025-07-28 04:30:39,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:31:08] 2025-07-28 04:30:39,138 | INFO     | aborting loop
[2025-07-28 06:31:08] 2025-07-28 04:30:39,311 | INFO     | [job] retrieve thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:39,446 | INFO     | [data] control thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:39,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 06:31:08] 2025-07-28 04:30:39,903 | INFO     | [job] control thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:40,011 | INFO     | [payload] control thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:40,059 | INFO     | [payload] validate_post thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:40,143 | INFO     | [job] job monitor thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:40,212 | INFO     | [payload] failed_post thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:40,540 | INFO     | [job] validate thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:40,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 06:31:08] 2025-07-28 04:30:40,648 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:40,673 | INFO     | [data] copytool_in thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:40,678 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:40,720 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:41,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:31:08] 2025-07-28 04:30:41,727 | INFO     | [data] copytool_out thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:42,224 | INFO     | [job] queue monitor thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:44,611 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:49,080 | INFO     | job.realtimelogging is not enabled
[2025-07-28 06:31:08] 2025-07-28 04:30:50,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 06:31:08] 2025-07-28 04:30:50,648 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538968463168)>', '<ExcThread(monitor, started 140537839482624)>']
[2025-07-28 06:31:08] 2025-07-28 04:30:55,667 | INFO     | all workflow threads have been joined
[2025-07-28 06:31:08] 2025-07-28 04:30:55,667 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 06:31:08] 2025-07-28 04:30:55,668 | INFO     | traces error code: 0
[2025-07-28 06:31:08] 2025-07-28 04:30:55,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 06:31:08] 2025-07-28 04:31:08,054 | INFO     | PID=1261078 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 06:31:08] 2025-07-28 04:31:08,055 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 06:31:08] 2025-07-28 04:31:08,055 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 06:31:08] 2025-07-28 04:31:08,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 06:31:08] 2025-07-28 04:31:08,055 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 06:31:08] 2025-07-28 04:31:08,055 | INFO     | [monitor] control thread has ended
[2025-07-28 06:31:08] 2025-07-28 04:31:08,116 [wrapper] ==== pilot stdout END ====
[2025-07-28 06:31:08] 2025-07-28 04:31:08,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 06:31:08] 2025-07-28 04:31:08,121 [wrapper] pilotpid: 1261078
[2025-07-28 06:31:08] 2025-07-28 04:31:08,123 [wrapper] Pilot exit status: 0
[2025-07-28 06:31:08] 2025-07-28 04:31:08,131 [wrapper] pandaids: 6746446295
[2025-07-28 06:31:08] 2025-07-28 04:31:08,152 [wrapper] cleanup supervisor_pilot 1280217 1261079
[2025-07-28 06:31:08] 2025-07-28 04:31:08,154 [wrapper] Test setup, not cleaning
[2025-07-28 06:31:08] 2025-07-28 04:31:08,157 [wrapper] apfmon messages muted
[2025-07-28 06:31:08] 2025-07-28 04:31:08,159 [wrapper] ==== wrapper stdout END ====
[2025-07-28 06:31:08] 2025-07-28 04:31:08,161 [wrapper] ==== wrapper stderr END ====
[2025-07-28 06:31:08]  *** Error codes and diagnostics ***
[2025-07-28 06:31:08]     "exeErrorCode": 0,
[2025-07-28 06:31:08]     "exeErrorDiag": "",
[2025-07-28 06:31:08]     "pilotErrorCode": 0,
[2025-07-28 06:31:08]     "pilotErrorDiag": "",
[2025-07-28 06:31:08]  *** Listing of results directory ***
[2025-07-28 06:31:08] total 398188
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc      5112 Jul 27 09:44 queuedata.json
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc    530466 Jul 27 09:44 pilot3.tar.gz
[2025-07-28 06:31:08] -rwx------ 1 boinc boinc     36292 Jul 27 09:46 runpilot2-wrapper.sh
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc       100 Jul 28 05:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 06:31:08] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 05:31 run_atlas
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc       105 Jul 28 05:31 job.xml
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc      6471 Jul 28 05:31 init_data.xml
[2025-07-28 06:31:08] -rw-r--r-- 2 boinc boinc 231259676 Jul 28 05:31 EVNT.45759097._000002.pool.root.1
[2025-07-28 06:31:08] -rw-r--r-- 2 boinc boinc     15095 Jul 28 05:31 start_atlas.sh
[2025-07-28 06:31:08] drwxrwx--x 2 boinc boinc        68 Jul 28 05:31 shared
[2025-07-28 06:31:08] -rw-r--r-- 2 boinc boinc    542883 Jul 28 05:31 input.tar.gz
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc         0 Jul 28 05:31 boinc_lockfile
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc      2560 Jul 28 05:31 pandaJob.out
[2025-07-28 06:31:08] -rw------- 1 boinc boinc    980117 Jul 28 05:31 agis_schedconf.cvmfs.json
[2025-07-28 06:31:08] -rw------- 1 boinc boinc   1593052 Jul 28 05:31 agis_ddmendpoints.agis.ALL.json
[2025-07-28 06:31:08] drwx------ 4 boinc boinc      4096 Jul 28 05:31 pilot3
[2025-07-28 06:31:08] -rw------- 1 boinc boinc 171203506 Jul 28 06:30 HITS.45759100._000041.pool.root.1
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc       529 Jul 28 06:30 boinc_task_state.xml
[2025-07-28 06:31:08] -rw------- 1 boinc boinc      1021 Jul 28 06:30 memory_monitor_summary.json
[2025-07-28 06:31:08] -rw------- 1 boinc boinc    354713 Jul 28 06:30 log.45759100._000041.job.log.tgz.1
[2025-07-28 06:31:08] -rw------- 1 boinc boinc      7791 Jul 28 06:30 heartbeat.json
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc        27 Jul 28 06:30 wrapper_checkpoint.txt
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc      8192 Jul 28 06:30 boinc_mmap_file
[2025-07-28 06:31:08] -rw------- 1 boinc boinc        95 Jul 28 06:31 pilot_heartbeat.json
[2025-07-28 06:31:08] -rw------- 1 boinc boinc       747 Jul 28 06:31 pilotlog.txt
[2025-07-28 06:31:08] -rw------- 1 boinc boinc    356813 Jul 28 06:31 log.45759100._000041.job.log.1
[2025-07-28 06:31:08] -rw------- 1 boinc boinc       357 Jul 28 06:31 output.list
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc       620 Jul 28 06:31 runtime_log
[2025-07-28 06:31:08] -rw------- 1 boinc boinc    727040 Jul 28 06:31 result.tar.gz
[2025-07-28 06:31:08] -rw------- 1 boinc boinc       654 Jul 28 06:31 yZpNDmEGB07n9Rq4apOajLDm4fhM0noT9bVof3QYDmTC2KDmnfewwn.diag
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc      8684 Jul 28 06:31 runtime_log.err
[2025-07-28 06:31:08] -rw-r--r-- 1 boinc boinc     22022 Jul 28 06:31 stderr.txt
[2025-07-28 06:31:08] HITS file was successfully produced:
[2025-07-28 06:31:08] -rw------- 1 boinc boinc 171203506 Jul 28 06:30 shared/HITS.pool.root.1
[2025-07-28 06:31:08]  *** Contents of shared directory: ***
[2025-07-28 06:31:08] total 394292
[2025-07-28 06:31:08] -rw-r--r-- 2 boinc boinc 231259676 Jul 28 05:31 ATLAS.root_0
[2025-07-28 06:31:08] -rw-r--r-- 2 boinc boinc     15095 Jul 28 05:31 start_atlas.sh
[2025-07-28 06:31:08] -rw-r--r-- 2 boinc boinc    542883 Jul 28 05:31 input.tar.gz
[2025-07-28 06:31:08] -rw------- 1 boinc boinc 171203506 Jul 28 06:30 HITS.pool.root.1
[2025-07-28 06:31:08] -rw------- 1 boinc boinc    727040 Jul 28 06:31 result.tar.gz
06:31:09 (1257330): run_atlas exited; CPU time 38989.712420
06:31:09 (1257330): called boinc_finish(0)

</stderr_txt>
]]>

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