Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:39:44 (385456): wrapper (7.7.26015): starting
13:39:44 (385456): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 13:39:44] Arguments: --nthreads 4
[2025-07-29 13:39:44] Threads: 4
[2025-07-29 13:39:44] Checking for CVMFS
[2025-07-29 13:39:44] No cvmfs_config command found, will try listing directly
[2025-07-29 13:39:44] CVMFS is ok
[2025-07-29 13:39:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 13:39:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 13:39:44] Further information can be found at the LHC@home message board.
[2025-07-29 13:39:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 13:39:44] Checking for apptainer binary...
[2025-07-29 13:39:44] which: no apptainer in ((null))
[2025-07-29 13:39:44] apptainer is not installed, using version from CVMFS
[2025-07-29 13:39:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 13:39:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-07-29 13:39:45] apptainer works
[2025-07-29 13:39:45] Set ATHENA_PROC_NUMBER=4
[2025-07-29 13:39:45] Set ATHENA_CORE_NUMBER=4
[2025-07-29 13:39:45] Starting ATLAS job with PandaID=6747375782
[2025-07-29 13:39:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 16:55:12]  *** The last 200 lines of the pilot log: ***
[2025-07-29 16:55:12] 2025-07-29 14:54:38,691 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2727.0835468749992
[2025-07-29 16:55:12] 2025-07-29 14:54:38,724 | INFO     | using path: /scratch/boinc/var/slot72/slots/0/PanDA_Pilot-6747375782/memory_monitor_summary.json (trf name=prmon)
[2025-07-29 16:55:12] 2025-07-29 14:54:38,725 | INFO     | extracted standard info from prmon json
[2025-07-29 16:55:12] 2025-07-29 14:54:38,725 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 16:55:12] 2025-07-29 14:54:38,725 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 16:55:12] 2025-07-29 14:54:38,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 16:55:12] 2025-07-29 14:54:38,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 16:55:12] 2025-07-29 14:54:38,729 | INFO     | fitting pss+swap vs Time
[2025-07-29 16:55:12] 2025-07-29 14:54:38,730 | INFO     | sum of square deviations: 2160561440.0
[2025-07-29 16:55:12] 2025-07-29 14:54:38,731 | INFO     | sum of deviations: 20756586449.0
[2025-07-29 16:55:12] 2025-07-29 14:54:38,731 | INFO     | mean x: 1753795030.0
[2025-07-29 16:55:12] 2025-07-29 14:54:38,731 | INFO     | mean y: 2322164.926701571
[2025-07-29 16:55:12] 2025-07-29 14:54:38,731 | INFO     | -- intersect: -16846445697.014566
[2025-07-29 16:55:12] 2025-07-29 14:54:38,732 | INFO     | intersect: -16846445697.014566
[2025-07-29 16:55:12] 2025-07-29 14:54:38,732 | INFO     | chi2: 1.3193689594892475
[2025-07-29 16:55:12] 2025-07-29 14:54:38,732 | INFO     | sum of square deviations: 1995283922.5
[2025-07-29 16:55:12] 2025-07-29 14:54:38,733 | INFO     | sum of deviations: 20157256630.000004
[2025-07-29 16:55:12] 2025-07-29 14:54:38,734 | INFO     | mean x: 1753794877.5
[2025-07-29 16:55:12] 2025-07-29 14:54:38,734 | INFO     | mean y: 2321611.7526881723
[2025-07-29 16:55:12] 2025-07-29 14:54:38,734 | INFO     | -- intersect: -17715303946.94617
[2025-07-29 16:55:12] 2025-07-29 14:54:38,734 | INFO     | intersect: -17715303946.94617
[2025-07-29 16:55:12] 2025-07-29 14:54:38,734 | INFO     | chi2: 1.320247249724919
[2025-07-29 16:55:12] 2025-07-29 14:54:38,734 | INFO     | current chi2=1.320247249724919 (change=-0.06656896309061518 %)
[2025-07-29 16:55:12] 2025-07-29 14:54:38,734 | INFO     | right removable region: 185
[2025-07-29 16:55:12] 2025-07-29 14:54:38,735 | INFO     | sum of square deviations: 1995283922.5
[2025-07-29 16:55:12] 2025-07-29 14:54:38,736 | INFO     | sum of deviations: -3290224405.000001
[2025-07-29 16:55:12] 2025-07-29 14:54:38,736 | INFO     | mean x: 1753795182.5
[2025-07-29 16:55:12] 2025-07-29 14:54:38,736 | INFO     | mean y: 2344048.494623656
[2025-07-29 16:55:12] 2025-07-29 14:54:38,736 | INFO     | -- intersect: 2894353373.9659114
[2025-07-29 16:55:12] 2025-07-29 14:54:38,736 | INFO     | intersect: 2894353373.9659114
[2025-07-29 16:55:12] 2025-07-29 14:54:38,737 | INFO     | chi2: 0.007509601136225258
[2025-07-29 16:55:12] 2025-07-29 14:54:38,737 | INFO     | current chi2=0.007509601136225258 (change=99.43081871964516 %)
[2025-07-29 16:55:12] 2025-07-29 14:54:38,737 | INFO     | sum of square deviations: 1838657730.0
[2025-07-29 16:55:12] 2025-07-29 14:54:38,738 | INFO     | sum of deviations: -1943353555.0
[2025-07-29 16:55:12] 2025-07-29 14:54:38,738 | INFO     | mean x: 1753795335.0
[2025-07-29 16:55:12] 2025-07-29 14:54:38,739 | INFO     | mean y: 2342737.82320442
[2025-07-29 16:55:12] 2025-07-29 14:54:38,739 | INFO     | -- intersect: 1856001710.564513
[2025-07-29 16:55:12] 2025-07-29 14:54:38,739 | INFO     | intersect: 1856001710.564513
[2025-07-29 16:55:12] 2025-07-29 14:54:38,739 | INFO     | chi2: 0.006008850668787491
[2025-07-29 16:55:12] 2025-07-29 14:54:38,739 | INFO     | current chi2=0.006008850668787491 (change=19.984423143305946 %)
[2025-07-29 16:55:12] 2025-07-29 14:54:38,739 | INFO     | left removable region: 20
[2025-07-29 16:55:12] 2025-07-29 14:54:38,740 | INFO     | sum of square deviations: 1392881930.0
[2025-07-29 16:55:12] 2025-07-29 14:54:38,741 | INFO     | sum of deviations: 129723392.9999999
[2025-07-29 16:55:12] 2025-07-29 14:54:38,741 | INFO     | mean x: 1753795457.0
[2025-07-29 16:55:12] 2025-07-29 14:54:38,741 | INFO     | mean y: 2340374.6
[2025-07-29 16:55:12] 2025-07-29 14:54:38,741 | INFO     | -- intersect: -160996009.05889735
[2025-07-29 16:55:12] 2025-07-29 14:54:38,741 | INFO     | intersect: -160996009.05889735
[2025-07-29 16:55:12] 2025-07-29 14:54:38,741 | INFO     | chi2: 0.0033992545344832146
[2025-07-29 16:55:12] 2025-07-29 14:54:38,741 | INFO     | -- intersect: -160996009.05889735
[2025-07-29 16:55:12] 2025-07-29 14:54:38,741 | INFO     | current memory leak: 0.09 B/s (using 165 data points, chi2=0.00)
[2025-07-29 16:55:12] 2025-07-29 14:54:38,742 | INFO     | could have reported an average CPU frequency of 2699 MHz (10 samples)
[2025-07-29 16:55:12] 2025-07-29 14:54:38,742 | INFO     | ..............................
[2025-07-29 16:55:12] 2025-07-29 14:54:38,742 | INFO     | . Timing measurements:
[2025-07-29 16:55:12] 2025-07-29 14:54:38,742 | INFO     | . get job = 0 s
[2025-07-29 16:55:12] 2025-07-29 14:54:38,742 | INFO     | . initial setup = 1 s
[2025-07-29 16:55:12] 2025-07-29 14:54:38,742 | INFO     | . payload setup = 10 s
[2025-07-29 16:55:12] 2025-07-29 14:54:38,743 | INFO     | . stage-in = 0 s
[2025-07-29 16:55:12] 2025-07-29 14:54:38,743 | INFO     | . payload execution = 11634 s
[2025-07-29 16:55:12] 2025-07-29 14:54:38,743 | INFO     | . stage-out = 0 s
[2025-07-29 16:55:12] 2025-07-29 14:54:38,743 | INFO     | . log creation = 0 s
[2025-07-29 16:55:12] 2025-07-29 14:54:38,743 | INFO     | ..............................
[2025-07-29 16:55:12] 2025-07-29 14:54:38,986 | INFO     | PID=391631 has CPU usage=15.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 16:55:12] 2025-07-29 14:54:38,986 | INFO     | .. there are 24 such processes running
[2025-07-29 16:55:12] 2025-07-29 14:54:39,224 | INFO     | 
[2025-07-29 16:55:12] 2025-07-29 14:54:39,225 | INFO     | job summary report
[2025-07-29 16:55:12] 2025-07-29 14:54:39,225 | INFO     | --------------------------------------------------
[2025-07-29 16:55:12] 2025-07-29 14:54:39,225 | INFO     | PanDA job id: 6747375782
[2025-07-29 16:55:12] 2025-07-29 14:54:39,225 | INFO     | task id: 45743349
[2025-07-29 16:55:12] 2025-07-29 14:54:39,225 | INFO     | errors: (none)
[2025-07-29 16:55:12] 2025-07-29 14:54:39,225 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 16:55:12] 2025-07-29 14:54:39,225 | INFO     | pilot state: finished 
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | transexitcode: 0
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | exeerrorcode: 0
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | exeerrordiag: 
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | exitcode: 0
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | exitmsg: OK
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | cpuconsumptiontime: 44061 s
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | nevents: 400
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | neventsw: 0
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | pid: 403427
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | pgrp: 403427
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | corecount: 4
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | event service: False
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | sizes: {0: 2391747, 1: 2391946, 8: 2392208, 12: 2392236, 11648: 2422326, 11650: 2431346, 11654: 2431530, 11662: 2431724}
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | --------------------------------------------------
[2025-07-29 16:55:12] 2025-07-29 14:54:39,226 | INFO     | 
[2025-07-29 16:55:12] 2025-07-29 14:54:39,227 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/0
[2025-07-29 16:55:12] 2025-07-29 14:54:39,260 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,261 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,261 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,261 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,262 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,262 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 16:55:12] 2025-07-29 14:54:39,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 16:55:12] 2025-07-29 14:54:39,263 | INFO     | job 6747375782 has completed (purged errors)
[2025-07-29 16:55:12] 2025-07-29 14:54:39,263 | INFO     | overall cleanup function is called
[2025-07-29 16:55:12] 2025-07-29 14:54:40,271 | INFO     | --- collectZombieJob: --- 10, [403427]
[2025-07-29 16:55:12] 2025-07-29 14:54:40,272 | INFO     | zombie collector waiting for pid 403427
[2025-07-29 16:55:12] 2025-07-29 14:54:40,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 16:55:12] 2025-07-29 14:54:40,272 | INFO     | collected zombie processes
[2025-07-29 16:55:12] 2025-07-29 14:54:40,272 | INFO     | will attempt to kill all subprocesses of pid=403427
[2025-07-29 16:55:12] 2025-07-29 14:54:40,960 | INFO     | process IDs to be killed: [403427] (in reverse order)
[2025-07-29 16:55:12] 2025-07-29 14:54:41,237 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 16:55:12] 2025-07-29 14:54:41,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 16:55:12] 2025-07-29 14:54:41,265 | INFO     | did not find any defunct processes belonging to 403427
[2025-07-29 16:55:12] 2025-07-29 14:54:41,288 | INFO     | did not find any defunct processes belonging to 403427
[2025-07-29 16:55:12] 2025-07-29 14:54:41,288 | INFO     | ready for new job
[2025-07-29 16:55:12] 2025-07-29 14:54:41,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 16:55:12] 2025-07-29 14:54:41,291 | INFO     | ***************************************
[2025-07-29 16:55:12] 2025-07-29 14:54:41,291 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 16:55:12] 2025-07-29 14:54:41,291 | INFO     | ***************************************
[2025-07-29 16:55:12] 2025-07-29 14:54:41,291 | INFO     | 
[2025-07-29 16:55:12] 2025-07-29 14:54:41,301 | INFO     | architecture information:
[2025-07-29 16:55:12] 2025-07-29 14:54:41,301 | INFO     | executing command: cat /etc/os-release
[2025-07-29 16:55:12] 2025-07-29 14:54:41,326 | INFO     | cat /etc/os-release:
[2025-07-29 16:55:12] NAME="CentOS Linux"
[2025-07-29 16:55:12] VERSION="7 (Core)"
[2025-07-29 16:55:12] ID="centos"
[2025-07-29 16:55:12] ID_LIKE="rhel fedora"
[2025-07-29 16:55:12] VERSION_ID="7"
[2025-07-29 16:55:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 16:55:12] ANSI_COLOR="0;31"
[2025-07-29 16:55:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 16:55:12] HOME_URL="https://www.centos.org/"
[2025-07-29 16:55:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 16:55:12] 
[2025-07-29 16:55:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 16:55:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 16:55:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 16:55:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 16:55:12] 
[2025-07-29 16:55:12] 2025-07-29 14:54:41,327 | INFO     | ***************************************
[2025-07-29 16:55:12] 2025-07-29 14:54:41,829 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/0
[2025-07-29 16:55:12] 2025-07-29 14:54:41,853 | INFO     | sufficient remaining disk space (3316428832768 B)
[2025-07-29 16:55:12] 2025-07-29 14:54:41,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 16:55:12] 2025-07-29 14:54:41,854 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 16:55:12] 2025-07-29 14:54:41,854 | INFO     | update_server=False
[2025-07-29 16:55:12] 2025-07-29 14:54:41,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 16:55:12] 2025-07-29 14:54:41,855 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 16:55:12] 2025-07-29 14:54:42,138 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-29 16:55:12] 2025-07-29 14:54:42,138 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-29 16:55:12] 2025-07-29 14:54:42,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 16:55:12] 2025-07-29 14:54:42,139 | INFO     | will abort loop
[2025-07-29 16:55:12] 2025-07-29 14:54:42,474 | INFO     | all data control threads have been joined
[2025-07-29 16:55:12] 2025-07-29 14:54:42,582 | INFO     | all job control threads have been joined
[2025-07-29 16:55:12] 2025-07-29 14:54:42,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 16:55:12] 2025-07-29 14:54:42,860 | INFO     | [job] retrieve thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:43,144 | INFO     | [job] job monitor thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:43,203 | INFO     | all payload control threads have been joined
[2025-07-29 16:55:12] 2025-07-29 14:54:43,356 | INFO     | [payload] failed_post thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:43,479 | INFO     | [data] control thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:43,534 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:43,571 | INFO     | [data] copytool_in thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:43,588 | INFO     | [job] control thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:43,732 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:43,822 | INFO     | [job] validate thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:43,836 | INFO     | [payload] validate_post thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:43,860 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 16:55:12] 2025-07-29 14:54:44,043 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:44,147 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:44,208 | INFO     | [payload] control thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:44,682 | INFO     | [data] copytool_out thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:44,865 | INFO     | [job] queue monitor thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:45,861 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 16:55:12] 2025-07-29 14:54:46,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23300115035968)>', '<ExcThread(monitor, started 23299878782720)>']
[2025-07-29 16:55:12] 2025-07-29 14:54:51,928 | INFO     | all workflow threads have been joined
[2025-07-29 16:55:12] 2025-07-29 14:54:51,928 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 16:55:12] 2025-07-29 14:54:51,929 | INFO     | traces error code: 0
[2025-07-29 16:55:12] 2025-07-29 14:54:51,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 16:55:12] 2025-07-29 14:54:56,701 [wrapper] supervise_pilot (15 min periods counter: 14)
[2025-07-29 16:55:12] 2025-07-29 14:55:11,871 | INFO     | PID=391631 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-29 16:55:12] 2025-07-29 14:55:11,872 | INFO     | .. there are 24 such processes running
[2025-07-29 16:55:12] 2025-07-29 14:55:11,872 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 16:55:12] 2025-07-29 14:55:11,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 16:55:12] 2025-07-29 14:55:11,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 16:55:12] 2025-07-29 14:55:11,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 16:55:12] 2025-07-29 14:55:11,872 | INFO     | [monitor] control thread has ended
[2025-07-29 16:55:12] 2025-07-29 14:55:12,109 [wrapper] ==== pilot stdout END ====
[2025-07-29 16:55:12] 2025-07-29 14:55:12,112 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 16:55:12] 2025-07-29 14:55:12,116 [wrapper] pilotpid: 391631
[2025-07-29 16:55:12] 2025-07-29 14:55:12,121 [wrapper] Pilot exit status: 0
[2025-07-29 16:55:12] 2025-07-29 14:55:12,136 [wrapper] pandaids: 6747375782
[2025-07-29 16:55:12] 2025-07-29 14:55:12,301 [wrapper] cleanup supervisor_pilot 1388660 391632
[2025-07-29 16:55:12] 2025-07-29 14:55:12,305 [wrapper] Test setup, not cleaning
[2025-07-29 16:55:12] 2025-07-29 14:55:12,309 [wrapper] apfmon messages muted
[2025-07-29 16:55:12] 2025-07-29 14:55:12,313 [wrapper] ==== wrapper stdout END ====
[2025-07-29 16:55:12] 2025-07-29 14:55:12,317 [wrapper] ==== wrapper stderr END ====
[2025-07-29 16:55:12]  *** Error codes and diagnostics ***
[2025-07-29 16:55:12]     "exeErrorCode": 0,
[2025-07-29 16:55:12]     "exeErrorDiag": "",
[2025-07-29 16:55:12]     "pilotErrorCode": 0,
[2025-07-29 16:55:12]     "pilotErrorDiag": "",
[2025-07-29 16:55:12]  *** Listing of results directory ***
[2025-07-29 16:55:12] total 350056
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc    530466 Jul 27 12:10 pilot3.tar.gz
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc      5112 Jul 27 12:36 queuedata.json
[2025-07-29 16:55:12] -rwx------ 1 boinc boinc     36292 Jul 27 12:36 runpilot2-wrapper.sh
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc       100 Jul 29 13:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 16:55:12] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 13:39 run_atlas
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc       105 Jul 29 13:39 job.xml
[2025-07-29 16:55:12] -rw-r--r-- 2 boinc boinc 142266230 Jul 29 13:39 EVNT.45743347._002611.pool.root.1
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc      6687 Jul 29 13:39 init_data.xml
[2025-07-29 16:55:12] -rw-r--r-- 2 boinc boinc     15095 Jul 29 13:39 start_atlas.sh
[2025-07-29 16:55:12] drwxrwx--x 2 boinc boinc      4096 Jul 29 13:39 shared
[2025-07-29 16:55:12] -rw-r--r-- 2 boinc boinc    542899 Jul 29 13:39 input.tar.gz
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc         0 Jul 29 13:39 boinc_lockfile
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc      2562 Jul 29 13:39 pandaJob.out
[2025-07-29 16:55:12] -rw------- 1 boinc boinc    977308 Jul 29 13:39 agis_schedconf.cvmfs.json
[2025-07-29 16:55:12] drwx------ 4 boinc boinc      4096 Jul 29 13:39 pilot3
[2025-07-29 16:55:12] -rw------- 1 boinc boinc 209573841 Jul 29 16:53 HITS.45743349._047024.pool.root.1
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc       530 Jul 29 16:54 boinc_task_state.xml
[2025-07-29 16:55:12] -rw------- 1 boinc boinc      1029 Jul 29 16:54 memory_monitor_summary.json
[2025-07-29 16:55:12] -rw------- 1 boinc boinc   1589827 Jul 29 16:54 agis_ddmendpoints.agis.ALL.json
[2025-07-29 16:55:12] -rw------- 1 boinc boinc    300187 Jul 29 16:54 log.45743349._047024.job.log.tgz.1
[2025-07-29 16:55:12] -rw------- 1 boinc boinc        95 Jul 29 16:54 pilot_heartbeat.json
[2025-07-29 16:55:12] -rw------- 1 boinc boinc      7786 Jul 29 16:54 heartbeat.json
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc      8192 Jul 29 16:55 boinc_mmap_file
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc        28 Jul 29 16:55 wrapper_checkpoint.txt
[2025-07-29 16:55:12] -rw------- 1 boinc boinc       822 Jul 29 16:55 pilotlog.txt
[2025-07-29 16:55:12] -rw------- 1 boinc boinc   1069780 Jul 29 16:55 log.45743349._047024.job.log.1
[2025-07-29 16:55:12] -rw------- 1 boinc boinc       357 Jul 29 16:55 output.list
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc       620 Jul 29 16:55 runtime_log
[2025-07-29 16:55:12] -rw------- 1 boinc boinc   1392640 Jul 29 16:55 result.tar.gz
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc      9027 Jul 29 16:55 runtime_log.err
[2025-07-29 16:55:12] -rw------- 1 boinc boinc       667 Jul 29 16:55 JpPODmJvD07n9Rq4apOajLDm4fhM0noT9bVof3QYDmLP2KDmVtNAfn.diag
[2025-07-29 16:55:12] -rw-r--r-- 1 boinc boinc     21005 Jul 29 16:55 stderr.txt
[2025-07-29 16:55:12] HITS file was successfully produced:
[2025-07-29 16:55:12] -rw------- 1 boinc boinc 209573841 Jul 29 16:53 shared/HITS.pool.root.1
[2025-07-29 16:55:12]  *** Contents of shared directory: ***
[2025-07-29 16:55:12] total 345512
[2025-07-29 16:55:12] -rw-r--r-- 2 boinc boinc 142266230 Jul 29 13:39 ATLAS.root_0
[2025-07-29 16:55:12] -rw-r--r-- 2 boinc boinc     15095 Jul 29 13:39 start_atlas.sh
[2025-07-29 16:55:12] -rw-r--r-- 2 boinc boinc    542899 Jul 29 13:39 input.tar.gz
[2025-07-29 16:55:12] -rw------- 1 boinc boinc 209573841 Jul 29 16:53 HITS.pool.root.1
[2025-07-29 16:55:12] -rw------- 1 boinc boinc   1392640 Jul 29 16:55 result.tar.gz
16:55:13 (385456): run_atlas exited; CPU time 44621.144481
16:55:13 (385456): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN