Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:46:14 (392360): wrapper (7.7.26015): starting
04:46:14 (392360): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 04:46:14] Arguments: --nthreads 3
[2025-07-28 04:46:14] Threads: 3
[2025-07-28 04:46:14] Checking for CVMFS
[2025-07-28 04:46:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 04:46:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 04:46:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 04:46:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 04:46:14] 2.9.2.0 3197323 5006 82424 148832 1 57 31310484 36864001 0 130560 0 3687133 99.990 172526 1942 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 04:46:14] CVMFS is ok
[2025-07-28 04:46:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 04:46:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 04:46:14] Further information can be found at the LHC@home message board.
[2025-07-28 04:46:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 04:46:14] Checking for apptainer binary...
[2025-07-28 04:46:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 04:46:14] Running /usr/bin/apptainer --version
[2025-07-28 04:46:14] apptainer version 1.4.1-1.1
[2025-07-28 04:46:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 04:46:14] magicA246b
[2025-07-28 04:46:14] apptainer works
[2025-07-28 04:46:14] Set ATHENA_PROC_NUMBER=3
[2025-07-28 04:46:14] Set ATHENA_CORE_NUMBER=3
[2025-07-28 04:46:14] Starting ATLAS job with PandaID=6745965974
[2025-07-28 04:46:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 06:26:44]  *** The last 200 lines of the pilot log: ***
[2025-07-28 06:26:44]  scope=mc23_13p6TeV
[2025-07-28 06:26:44]  status=None
[2025-07-28 06:26:44]  status_code=0
[2025-07-28 06:26:44]  storage_token=
[2025-07-28 06:26:44]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745965974/log.45758307._000057.job.log.tgz.1
[2025-07-28 06:26:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/28/log.45758307._000057.job.log.tgz.1
[2025-07-28 06:26:44]  workdir=None
[2025-07-28 06:26:44] ]
[2025-07-28 06:26:44] 2025-07-28 04:26:10,281 | INFO     | transferring file log.45758307._000057.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745965974/log.45758307._000057.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 06:26:44] 2025-07-28 04:26:10,281 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745965974/log.45758307._000057.job.log.tgz.1 /local/data/boinc/slots/0/log.45758307._0000
[2025-07-28 06:26:44] 2025-07-28 04:26:10,294 | INFO     | adding to output.list: log.45758307._000057.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/28/log.45758307._000057.job.log.tg
[2025-07-28 06:26:44] 2025-07-28 04:26:10,294 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 06:26:44] 2025-07-28 04:26:10,294 | INFO     | summary of transferred files:
[2025-07-28 06:26:44] 2025-07-28 04:26:10,294 | INFO     |  -- lfn=log.45758307._000057.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 06:26:44] 2025-07-28 04:26:10,294 | INFO     | stage-out finished correctly
[2025-07-28 06:26:44] 2025-07-28 04:26:10,580 | INFO     | PID=395997 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 06:26:44] 2025-07-28 04:26:10,936 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 06:26:44] 2025-07-28 04:26:10,968 | INFO     | job 6745965974 has state=finished
[2025-07-28 06:26:44] 2025-07-28 04:26:10,969 | INFO     | preparing for final server update for job 6745965974 in state='finished'
[2025-07-28 06:26:44] 2025-07-28 04:26:10,969 | INFO     | this job has now completed (state=finished)
[2025-07-28 06:26:44] 2025-07-28 04:26:10,969 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 06:26:44] 2025-07-28 04:26:10,969 | INFO     | log transfer has been attempted: DONE
[2025-07-28 06:26:44] 2025-07-28 04:26:10,969 | INFO     | job 6745965974 has finished - writing final server update
[2025-07-28 06:26:44] 2025-07-28 04:26:10,969 | INFO     | total number of processed events: 400 (read)
[2025-07-28 06:26:44] 2025-07-28 04:26:10,969 | INFO     | executing command: lscpu
[2025-07-28 06:26:44] 2025-07-28 04:26:10,982 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 06:26:44] 2025-07-28 04:26:13,398 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 06:26:44] 2025-07-28 04:26:13,400 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3870.1872499999995
[2025-07-28 06:26:44] 2025-07-28 04:26:13,400 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745965974/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 06:26:44] 2025-07-28 04:26:13,401 | INFO     | extracted standard info from prmon json
[2025-07-28 06:26:44] 2025-07-28 04:26:13,401 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 06:26:44] 2025-07-28 04:26:13,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 06:26:44] 2025-07-28 04:26:13,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 06:26:44] 2025-07-28 04:26:13,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 06:26:44] 2025-07-28 04:26:13,402 | INFO     | fitting pss+swap vs Time
[2025-07-28 06:26:44] 2025-07-28 04:26:13,402 | INFO     | sum of square deviations: 233641590.0
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | sum of deviations: -13720024961.999998
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | mean x: 1753673850.0
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | mean y: 2436460.2527472526
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | -- intersect: 102982599355.08084
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | intersect: 102982599355.08084
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | chi2: 0.1053911614142614
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | -- intersect: 102982599355.08084
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | current memory leak: -58.72 B/s (using 91 data points, chi2=0.11)
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | could have reported an average CPU frequency of 3973 MHz (7 samples)
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | ..............................
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | . Timing measurements:
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | . get job = 0 s
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | . initial setup = 1 s
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | . payload setup = 3 s
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | . stage-in = 0 s
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | . payload execution = 5969 s
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | . stage-out = 0 s
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | . log creation = 0 s
[2025-07-28 06:26:44] 2025-07-28 04:26:13,403 | INFO     | ..............................
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | 
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | job summary report
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | --------------------------------------------------
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | PanDA job id: 6745965974
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | task id: 45758307
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | errors: (none)
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | pilot state: finished 
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | transexitcode: 0
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | exeerrorcode: 0
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | exeerrordiag: 
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | exitcode: 0
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | exitmsg: OK
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | cpuconsumptiontime: 17242 s
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | nevents: 400
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | neventsw: 0
[2025-07-28 06:26:44] 2025-07-28 04:26:13,433 | INFO     | pid: 402503
[2025-07-28 06:26:44] 2025-07-28 04:26:13,434 | INFO     | pgrp: 402503
[2025-07-28 06:26:44] 2025-07-28 04:26:13,434 | INFO     | corecount: 3
[2025-07-28 06:26:44] 2025-07-28 04:26:13,434 | INFO     | event service: False
[2025-07-28 06:26:44] 2025-07-28 04:26:13,434 | INFO     | sizes: {0: 2397456, 2: 2397718, 11: 2397746, 5977: 2433663, 5978: 2433663, 5980: 2433857}
[2025-07-28 06:26:44] 2025-07-28 04:26:13,434 | INFO     | --------------------------------------------------
[2025-07-28 06:26:44] 2025-07-28 04:26:13,434 | INFO     | 
[2025-07-28 06:26:44] 2025-07-28 04:26:13,434 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 06:26:44] 2025-07-28 04:26:13,445 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,445 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,445 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,445 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | job 6745965974 has completed (purged errors)
[2025-07-28 06:26:44] 2025-07-28 04:26:13,446 | INFO     | overall cleanup function is called
[2025-07-28 06:26:44] 2025-07-28 04:26:14,030 | WARNING  | process 402503 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 06:26:44] 2025-07-28 04:26:14,056 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 06:26:44] 2025-07-28 04:26:14,056 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 06:26:44] 2025-07-28 04:26:14,056 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6745965974/payload.stdout) since it has not been created yet
[2025-07-28 06:26:44] 2025-07-28 04:26:14,056 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 06:26:44] 2025-07-28 04:26:14,067 | INFO     | sufficient remaining disk space (369206755328 B)
[2025-07-28 06:26:44] 2025-07-28 04:26:14,067 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-07-28 06:26:44] 2025-07-28 04:26:14,067 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6745965974/HITS.45758307._000057.pool.root.1 since it does not exist
[2025-07-28 06:26:44] 2025-07-28 04:26:14,103 | INFO     | number of running child processes to parent process 402503: 1
[2025-07-28 06:26:44] 2025-07-28 04:26:14,103 | INFO     | maximum number of monitored processes: 6
[2025-07-28 06:26:44] 2025-07-28 04:26:14,103 | INFO     | aborting job monitoring since job object (job id=6745965974) has expired
[2025-07-28 06:26:44] 2025-07-28 04:26:14,452 | INFO     | --- collectZombieJob: --- 10, [402503]
[2025-07-28 06:26:44] 2025-07-28 04:26:14,453 | INFO     | zombie collector waiting for pid 402503
[2025-07-28 06:26:44] 2025-07-28 04:26:14,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 06:26:44] 2025-07-28 04:26:14,453 | INFO     | collected zombie processes
[2025-07-28 06:26:44] 2025-07-28 04:26:14,453 | INFO     | will attempt to kill all subprocesses of pid=402503
[2025-07-28 06:26:44] 2025-07-28 04:26:14,491 | INFO     | process IDs to be killed: [402503] (in reverse order)
[2025-07-28 06:26:44] 2025-07-28 04:26:14,515 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 06:26:44] 2025-07-28 04:26:14,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 06:26:44] 2025-07-28 04:26:14,516 | INFO     | did not find any defunct processes belonging to 402503
[2025-07-28 06:26:44] 2025-07-28 04:26:14,517 | INFO     | did not find any defunct processes belonging to 402503
[2025-07-28 06:26:44] 2025-07-28 04:26:14,517 | INFO     | ready for new job
[2025-07-28 06:26:44] 2025-07-28 04:26:14,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 06:26:44] 2025-07-28 04:26:14,518 | INFO     | ***************************************
[2025-07-28 06:26:44] 2025-07-28 04:26:14,518 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 06:26:44] 2025-07-28 04:26:14,518 | INFO     | ***************************************
[2025-07-28 06:26:44] 2025-07-28 04:26:14,518 | INFO     | 
[2025-07-28 06:26:44] 2025-07-28 04:26:14,519 | INFO     | architecture information:
[2025-07-28 06:26:44] 2025-07-28 04:26:14,519 | INFO     | executing command: cat /etc/os-release
[2025-07-28 06:26:44] 2025-07-28 04:26:14,527 | INFO     | cat /etc/os-release:
[2025-07-28 06:26:44] NAME="CentOS Linux"
[2025-07-28 06:26:44] VERSION="7 (Core)"
[2025-07-28 06:26:44] ID="centos"
[2025-07-28 06:26:44] ID_LIKE="rhel fedora"
[2025-07-28 06:26:44] VERSION_ID="7"
[2025-07-28 06:26:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 06:26:44] ANSI_COLOR="0;31"
[2025-07-28 06:26:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 06:26:44] HOME_URL="https://www.centos.org/"
[2025-07-28 06:26:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 06:26:44] 
[2025-07-28 06:26:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 06:26:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 06:26:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 06:26:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 06:26:44] 
[2025-07-28 06:26:44] 2025-07-28 04:26:14,528 | INFO     | ***************************************
[2025-07-28 06:26:44] 2025-07-28 04:26:15,031 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 06:26:44] 2025-07-28 04:26:15,044 | INFO     | sufficient remaining disk space (369207803904 B)
[2025-07-28 06:26:44] 2025-07-28 04:26:15,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 06:26:44] 2025-07-28 04:26:15,044 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 06:26:44] 2025-07-28 04:26:15,044 | INFO     | update_server=False
[2025-07-28 06:26:44] 2025-07-28 04:26:15,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 06:26:44] 2025-07-28 04:26:15,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:26:44] 2025-07-28 04:26:15,045 | INFO     | will abort loop
[2025-07-28 06:26:44] 2025-07-28 04:26:15,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 06:26:44] 2025-07-28 04:26:15,408 | INFO     | all payload control threads have been joined
[2025-07-28 06:26:44] 2025-07-28 04:26:15,487 | INFO     | all data control threads have been joined
[2025-07-28 06:26:44] 2025-07-28 04:26:15,638 | INFO     | all job control threads have been joined
[2025-07-28 06:26:44] 2025-07-28 04:26:15,834 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 06:26:44] 2025-07-28 04:26:16,050 | INFO     | [job] retrieve thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,050 | INFO     | [job] job monitor thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,050 | INFO     | [job] queue monitor thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,099 | INFO     | [data] copytool_in thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,221 | INFO     | [payload] failed_post thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,411 | INFO     | [payload] control thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,493 | INFO     | [data] control thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,523 | INFO     | [job] validate thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,591 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,644 | INFO     | [job] control thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,677 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,852 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:16,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 06:26:44] 2025-07-28 04:26:17,281 | INFO     | [payload] validate_post thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:17,840 | INFO     | [data] copytool_out thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:20,982 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:25,907 | INFO     | job.realtimelogging is not enabled
[2025-07-28 06:26:44] 2025-07-28 04:26:26,912 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 06:26:44] 2025-07-28 04:26:28,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995760179008)>', '<ExcThread(monitor, started 139994987489024)>']
[2025-07-28 06:26:44] 2025-07-28 04:26:33,164 | INFO     | all workflow threads have been joined
[2025-07-28 06:26:44] 2025-07-28 04:26:33,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 06:26:44] 2025-07-28 04:26:33,164 | INFO     | traces error code: 0
[2025-07-28 06:26:44] 2025-07-28 04:26:33,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 06:26:44] 2025-07-28 04:26:44,714 | INFO     | PID=395997 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 06:26:44] 2025-07-28 04:26:44,715 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 06:26:44] 2025-07-28 04:26:44,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 06:26:44] 2025-07-28 04:26:44,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 06:26:44] 2025-07-28 04:26:44,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 06:26:44] 2025-07-28 04:26:44,715 | INFO     | [monitor] control thread has ended
[2025-07-28 06:26:44] 2025-07-28 04:26:44,759 [wrapper] ==== pilot stdout END ====
[2025-07-28 06:26:44] 2025-07-28 04:26:44,762 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 06:26:44] 2025-07-28 04:26:44,764 [wrapper] pilotpid: 395997
[2025-07-28 06:26:44] 2025-07-28 04:26:44,767 [wrapper] Pilot exit status: 0
[2025-07-28 06:26:44] 2025-07-28 04:26:44,774 [wrapper] pandaids: 6745965974
[2025-07-28 06:26:44] 2025-07-28 04:26:44,790 [wrapper] cleanup supervisor_pilot  414718 395998
[2025-07-28 06:26:44] 2025-07-28 04:26:44,793 [wrapper] Test setup, not cleaning
[2025-07-28 06:26:44] 2025-07-28 04:26:44,795 [wrapper] apfmon messages muted
[2025-07-28 06:26:44] 2025-07-28 04:26:44,798 [wrapper] ==== wrapper stdout END ====
[2025-07-28 06:26:44] 2025-07-28 04:26:44,800 [wrapper] ==== wrapper stderr END ====
[2025-07-28 06:26:44]  *** Error codes and diagnostics ***
[2025-07-28 06:26:44]     "exeErrorCode": 0,
[2025-07-28 06:26:44]     "exeErrorDiag": "",
[2025-07-28 06:26:44]     "pilotErrorCode": 0,
[2025-07-28 06:26:44]     "pilotErrorDiag": "",
[2025-07-28 06:26:44]  *** Listing of results directory ***
[2025-07-28 06:26:44] total 418824
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc    530466 Jul 27 04:22 pilot3.tar.gz
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc      5112 Jul 27 04:31 queuedata.json
[2025-07-28 06:26:44] -rwx------ 1 boinc boinc     36292 Jul 27 04:32 runpilot2-wrapper.sh
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc       100 Jul 28 04:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 06:26:44] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 04:46 run_atlas
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc       105 Jul 28 04:46 job.xml
[2025-07-28 06:26:44] -rw-r--r-- 2 boinc boinc 243794340 Jul 28 04:46 EVNT.45758305._000003.pool.root.1
[2025-07-28 06:26:44] -rw-r--r-- 2 boinc boinc    542868 Jul 28 04:46 input.tar.gz
[2025-07-28 06:26:44] -rw-r--r-- 2 boinc boinc     15095 Jul 28 04:46 start_atlas.sh
[2025-07-28 06:26:44] drwxrwx--x 2 boinc boinc      4096 Jul 28 04:46 shared
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc         0 Jul 28 04:46 boinc_setup_complete
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc      6527 Jul 28 04:46 init_data.xml
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc         0 Jul 28 04:46 boinc_lockfile
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc      2546 Jul 28 04:46 pandaJob.out
[2025-07-28 06:26:44] -rw------- 1 boinc boinc    980125 Jul 28 04:46 agis_schedconf.cvmfs.json
[2025-07-28 06:26:44] -rw------- 1 boinc boinc   1593052 Jul 28 04:46 agis_ddmendpoints.agis.ALL.json
[2025-07-28 06:26:44] drwx------ 4 boinc boinc      4096 Jul 28 04:46 pilot3
[2025-07-28 06:26:44] -rw------- 1 boinc boinc        95 Jul 28 06:25 pilot_heartbeat.json
[2025-07-28 06:26:44] -rw------- 1 boinc boinc 179601288 Jul 28 06:25 HITS.45758307._000057.pool.root.1
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc       529 Jul 28 06:25 boinc_task_state.xml
[2025-07-28 06:26:44] -rw------- 1 boinc boinc      1018 Jul 28 06:26 memory_monitor_summary.json
[2025-07-28 06:26:44] -rw------- 1 boinc boinc    231176 Jul 28 06:26 log.45758307._000057.job.log.tgz.1
[2025-07-28 06:26:44] -rw------- 1 boinc boinc      7748 Jul 28 06:26 heartbeat.json
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc        27 Jul 28 06:26 wrapper_checkpoint.txt
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc      8192 Jul 28 06:26 boinc_mmap_file
[2025-07-28 06:26:44] -rw------- 1 boinc boinc       746 Jul 28 06:26 pilotlog.txt
[2025-07-28 06:26:44] -rw------- 1 boinc boinc    573298 Jul 28 06:26 log.45758307._000057.job.log.1
[2025-07-28 06:26:44] -rw------- 1 boinc boinc       357 Jul 28 06:26 output.list
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc       620 Jul 28 06:26 runtime_log
[2025-07-28 06:26:44] -rw------- 1 boinc boinc    819200 Jul 28 06:26 result.tar.gz
[2025-07-28 06:26:44] -rw------- 1 boinc boinc       662 Jul 28 06:26 xsCLDmnM6z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQxTLDm2yIfCo.diag
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc      8754 Jul 28 06:26 runtime_log.err
[2025-07-28 06:26:44] -rw-r--r-- 1 boinc boinc     22185 Jul 28 06:26 stderr.txt
[2025-07-28 06:26:44] HITS file was successfully produced:
[2025-07-28 06:26:44] -rw------- 1 boinc boinc 179601288 Jul 28 06:25 shared/HITS.pool.root.1
[2025-07-28 06:26:44]  *** Contents of shared directory: ***
[2025-07-28 06:26:44] total 414832
[2025-07-28 06:26:44] -rw-r--r-- 2 boinc boinc 243794340 Jul 28 04:46 ATLAS.root_0
[2025-07-28 06:26:44] -rw-r--r-- 2 boinc boinc    542868 Jul 28 04:46 input.tar.gz
[2025-07-28 06:26:44] -rw-r--r-- 2 boinc boinc     15095 Jul 28 04:46 start_atlas.sh
[2025-07-28 06:26:44] -rw------- 1 boinc boinc 179601288 Jul 28 06:25 HITS.pool.root.1
[2025-07-28 06:26:44] -rw------- 1 boinc boinc    819200 Jul 28 06:26 result.tar.gz
06:26:45 (392360): run_atlas exited; CPU time 17260.110053
06:26:45 (392360): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN