Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:06:29 (50172): wrapper (7.7.26015): starting
09:06:29 (50172): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 09:06:29] Arguments: --nthreads 10
[2025-07-27 09:06:29] Threads: 10
[2025-07-27 09:06:29] Checking for CVMFS
[2025-07-27 09:06:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:06:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:06:30] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:06:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:06:30] 2.13.1.0 158023 6725 154480 148812 2 65 36491704 39288832 5247 16776704 0 6270068 99.616 8867369 39466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 09:06:30] CVMFS is ok
[2025-07-27 09:06:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 09:06:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 09:06:30] Further information can be found at the LHC@home message board.
[2025-07-27 09:06:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:06:30] Checking for apptainer binary...
[2025-07-27 09:06:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:06:30] Running /usr/bin/apptainer --version
[2025-07-27 09:06:30] apptainer version 1.4.1-1.el9
[2025-07-27 09:06:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:06:30] c-210-6.aglt2.org
[2025-07-27 09:06:30] apptainer works
[2025-07-27 09:06:30] Set ATHENA_PROC_NUMBER=10
[2025-07-27 09:06:30] Set ATHENA_CORE_NUMBER=10
[2025-07-27 09:06:30] Starting ATLAS job with PandaID=6745910102
[2025-07-27 09:06:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 10:45:20]  *** The last 200 lines of the pilot log: ***
[2025-07-27 10:45:20]  protocol_id=None
[2025-07-27 10:45:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 10:45:20]  replicas=None
[2025-07-27 10:45:20]  scope=mc23_13p6TeV
[2025-07-27 10:45:20]  status=None
[2025-07-27 10:45:20]  status_code=0
[2025-07-27 10:45:20]  storage_token=
[2025-07-27 10:45:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745910102/log.45743349._045551.job.log.tgz.1
[2025-07-27 10:45:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/85/log.45743349._045551.job.log.tgz.1
[2025-07-27 10:45:20]  workdir=None
[2025-07-27 10:45:20] ]
[2025-07-27 10:45:20] 2025-07-27 14:44:39,711 | INFO     | transferring file log.45743349._045551.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745910102/log.45743349._045551.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 10:45:20] 2025-07-27 14:44:39,711 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745910102/log.45743349._045551.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._045551.job
[2025-07-27 10:45:20] 2025-07-27 14:44:39,736 | INFO     | adding to output.list: log.45743349._045551.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/85/log.45743349._045551.job.log.tg
[2025-07-27 10:45:20] 2025-07-27 14:44:39,737 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 10:45:20] 2025-07-27 14:44:39,737 | INFO     | summary of transferred files:
[2025-07-27 10:45:20] 2025-07-27 14:44:39,737 | INFO     |  -- lfn=log.45743349._045551.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 10:45:20] 2025-07-27 14:44:39,738 | INFO     | stage-out finished correctly
[2025-07-27 10:45:20] 2025-07-27 14:44:41,620 | INFO     | monitor loop #437: job 0:6745910102 is in state 'finished'
[2025-07-27 10:45:20] 2025-07-27 14:44:41,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 10:45:20] 2025-07-27 14:44:42,207 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 10:45:20] 2025-07-27 14:44:42,402 | INFO     | 5881s have passed since pilot start - server update state is 'RUNNING'
[2025-07-27 10:45:20] 2025-07-27 14:44:43,022 | INFO     | job 6745910102 has state=finished
[2025-07-27 10:45:20] 2025-07-27 14:44:43,022 | INFO     | preparing for final server update for job 6745910102 in state='finished'
[2025-07-27 10:45:20] 2025-07-27 14:44:43,023 | INFO     | this job has now completed (state=finished)
[2025-07-27 10:45:20] 2025-07-27 14:44:43,023 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 10:45:20] 2025-07-27 14:44:43,023 | INFO     | log transfer has been attempted: DONE
[2025-07-27 10:45:20] 2025-07-27 14:44:43,023 | INFO     | job 6745910102 has finished - writing final server update
[2025-07-27 10:45:20] 2025-07-27 14:44:43,023 | INFO     | total number of processed events: 400 (read)
[2025-07-27 10:45:20] 2025-07-27 14:44:43,024 | INFO     | executing command: lscpu
[2025-07-27 10:45:20] 2025-07-27 14:44:43,063 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 10:45:20] 2025-07-27 14:44:43,709 | INFO     | PID=53849 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 10:45:20] 2025-07-27 14:44:43,710 | INFO     | .. there are 6 such processes running
[2025-07-27 10:45:20] 2025-07-27 14:44:44,124 | INFO     | monitor loop #438: job 0:6745910102 is in state 'finished'
[2025-07-27 10:45:20] 2025-07-27 14:44:44,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 10:45:20] 2025-07-27 14:44:46,627 | INFO     | monitor loop #439: job 0:6745910102 is in state 'finished'
[2025-07-27 10:45:20] 2025-07-27 14:44:46,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 10:45:20] 2025-07-27 14:44:48,126 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 10:45:20] 2025-07-27 14:44:48,134 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2562.3805249999996
[2025-07-27 10:45:20] 2025-07-27 14:44:48,142 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745910102/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 10:45:20] 2025-07-27 14:44:48,144 | INFO     | extracted standard info from prmon json
[2025-07-27 10:45:20] 2025-07-27 14:44:48,144 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 10:45:20] 2025-07-27 14:44:48,144 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 10:45:20] 2025-07-27 14:44:48,144 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 10:45:20] 2025-07-27 14:44:48,145 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 10:45:20] 2025-07-27 14:44:48,148 | INFO     | fitting pss+swap vs Time
[2025-07-27 10:45:20] 2025-07-27 14:44:48,149 | INFO     | sum of square deviations: 218571540.0
[2025-07-27 10:45:20] 2025-07-27 14:44:48,149 | INFO     | sum of deviations: -3492359556.0
[2025-07-27 10:45:20] 2025-07-27 14:44:48,149 | INFO     | mean x: 1753624622.0
[2025-07-27 10:45:20] 2025-07-27 14:44:48,149 | INFO     | mean y: 2668493.0
[2025-07-27 10:45:20] 2025-07-27 14:44:48,150 | INFO     | -- intersect: 28022271165.32682
[2025-07-27 10:45:20] 2025-07-27 14:44:48,150 | INFO     | intersect: 28022271165.32682
[2025-07-27 10:45:20] 2025-07-27 14:44:48,150 | INFO     | chi2: 0.07405332675490948
[2025-07-27 10:45:20] 2025-07-27 14:44:48,150 | INFO     | -- intersect: 28022271165.32682
[2025-07-27 10:45:20] 2025-07-27 14:44:48,150 | INFO     | current memory leak: -15.98 B/s (using 89 data points, chi2=0.07)
[2025-07-27 10:45:20] 2025-07-27 14:44:48,151 | INFO     | could have reported an average CPU frequency of 2582 MHz (7 samples)
[2025-07-27 10:45:20] 2025-07-27 14:44:48,151 | INFO     | ..............................
[2025-07-27 10:45:20] 2025-07-27 14:44:48,152 | INFO     | . Timing measurements:
[2025-07-27 10:45:20] 2025-07-27 14:44:48,152 | INFO     | . get job = 0 s
[2025-07-27 10:45:20] 2025-07-27 14:44:48,152 | INFO     | . initial setup = 2 s
[2025-07-27 10:45:20] 2025-07-27 14:44:48,152 | INFO     | . payload setup = 8 s
[2025-07-27 10:45:20] 2025-07-27 14:44:48,152 | INFO     | . stage-in = 0 s
[2025-07-27 10:45:20] 2025-07-27 14:44:48,152 | INFO     | . payload execution = 5847 s
[2025-07-27 10:45:20] 2025-07-27 14:44:48,152 | INFO     | . stage-out = 1 s
[2025-07-27 10:45:20] 2025-07-27 14:44:48,152 | INFO     | . log creation = 0 s
[2025-07-27 10:45:20] 2025-07-27 14:44:48,153 | INFO     | ..............................
[2025-07-27 10:45:20] 2025-07-27 14:44:48,258 | INFO     | 
[2025-07-27 10:45:20] 2025-07-27 14:44:48,259 | INFO     | job summary report
[2025-07-27 10:45:20] 2025-07-27 14:44:48,259 | INFO     | --------------------------------------------------
[2025-07-27 10:45:20] 2025-07-27 14:44:48,259 | INFO     | PanDA job id: 6745910102
[2025-07-27 10:45:20] 2025-07-27 14:44:48,259 | INFO     | task id: 45743349
[2025-07-27 10:45:20] 2025-07-27 14:44:48,259 | INFO     | errors: (none)
[2025-07-27 10:45:20] 2025-07-27 14:44:48,259 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 10:45:20] 2025-07-27 14:44:48,259 | INFO     | pilot state: finished 
[2025-07-27 10:45:20] 2025-07-27 14:44:48,259 | INFO     | transexitcode: 0
[2025-07-27 10:45:20] 2025-07-27 14:44:48,260 | INFO     | exeerrorcode: 0
[2025-07-27 10:45:20] 2025-07-27 14:44:48,260 | INFO     | exeerrordiag: 
[2025-07-27 10:45:20] 2025-07-27 14:44:48,260 | INFO     | exitcode: 0
[2025-07-27 10:45:20] 2025-07-27 14:44:48,260 | INFO     | exitmsg: OK
[2025-07-27 10:45:20] 2025-07-27 14:44:48,260 | INFO     | cpuconsumptiontime: 53824 s
[2025-07-27 10:45:20] 2025-07-27 14:44:48,260 | INFO     | nevents: 400
[2025-07-27 10:45:20] 2025-07-27 14:44:48,260 | INFO     | neventsw: 0
[2025-07-27 10:45:20] 2025-07-27 14:44:48,260 | INFO     | pid: 60248
[2025-07-27 10:45:20] 2025-07-27 14:44:48,260 | INFO     | pgrp: 60248
[2025-07-27 10:45:20] 2025-07-27 14:44:48,260 | INFO     | corecount: 10
[2025-07-27 10:45:20] 2025-07-27 14:44:48,261 | INFO     | event service: False
[2025-07-27 10:45:20] 2025-07-27 14:44:48,261 | INFO     | sizes: {0: 2396595, 1: 2397451, 6: 2397713, 12: 2397741, 5859: 2424384, 5861: 2433382, 5863: 2433566, 5869: 2433760}
[2025-07-27 10:45:20] 2025-07-27 14:44:48,261 | INFO     | --------------------------------------------------
[2025-07-27 10:45:20] 2025-07-27 14:44:48,261 | INFO     | 
[2025-07-27 10:45:20] 2025-07-27 14:44:48,261 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 10:45:20] 2025-07-27 14:44:48,286 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,287 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,287 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,287 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,288 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,288 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,288 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,288 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,288 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,288 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,289 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,289 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,289 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,289 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,289 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 10:45:20] 2025-07-27 14:44:48,289 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,290 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 10:45:20] 2025-07-27 14:44:48,290 | INFO     | job 6745910102 has completed (purged errors)
[2025-07-27 10:45:20] 2025-07-27 14:44:48,290 | INFO     | overall cleanup function is called
[2025-07-27 10:45:20] 2025-07-27 14:44:49,299 | INFO     | --- collectZombieJob: --- 10, [60248]
[2025-07-27 10:45:20] 2025-07-27 14:44:49,300 | INFO     | zombie collector waiting for pid 60248
[2025-07-27 10:45:20] 2025-07-27 14:44:49,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 10:45:20] 2025-07-27 14:44:49,300 | INFO     | collected zombie processes
[2025-07-27 10:45:20] 2025-07-27 14:44:49,301 | INFO     | will attempt to kill all subprocesses of pid=60248
[2025-07-27 10:45:20] 2025-07-27 14:44:49,514 | INFO     | process IDs to be killed: [60248] (in reverse order)
[2025-07-27 10:45:20] 2025-07-27 14:44:49,581 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 10:45:20] 2025-07-27 14:44:49,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 10:45:20] 2025-07-27 14:44:49,588 | INFO     | did not find any defunct processes belonging to 60248
[2025-07-27 10:45:20] 2025-07-27 14:44:49,595 | INFO     | did not find any defunct processes belonging to 60248
[2025-07-27 10:45:20] 2025-07-27 14:44:49,596 | INFO     | ready for new job
[2025-07-27 10:45:20] 2025-07-27 14:44:49,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 10:45:20] 2025-07-27 14:44:49,597 | INFO     | ***************************************
[2025-07-27 10:45:20] 2025-07-27 14:44:49,598 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 10:45:20] 2025-07-27 14:44:49,598 | INFO     | ***************************************
[2025-07-27 10:45:20] 2025-07-27 14:44:49,598 | INFO     | 
[2025-07-27 10:45:20] 2025-07-27 14:44:49,599 | INFO     | architecture information:
[2025-07-27 10:45:20] 2025-07-27 14:44:49,600 | INFO     | executing command: cat /etc/os-release
[2025-07-27 10:45:20] 2025-07-27 14:44:49,619 | INFO     | cat /etc/os-release:
[2025-07-27 10:45:20] NAME="CentOS Linux"
[2025-07-27 10:45:20] VERSION="7 (Core)"
[2025-07-27 10:45:20] ID="centos"
[2025-07-27 10:45:20] ID_LIKE="rhel fedora"
[2025-07-27 10:45:20] VERSION_ID="7"
[2025-07-27 10:45:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 10:45:20] ANSI_COLOR="0;31"
[2025-07-27 10:45:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 10:45:20] HOME_URL="https://www.centos.org/"
[2025-07-27 10:45:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 10:45:20] 
[2025-07-27 10:45:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 10:45:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 10:45:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 10:45:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 10:45:20] 
[2025-07-27 10:45:20] 2025-07-27 14:44:49,619 | INFO     | ***************************************
[2025-07-27 10:45:20] 2025-07-27 14:44:50,122 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 10:45:20] 2025-07-27 14:44:50,142 | INFO     | sufficient remaining disk space (53832843264 B)
[2025-07-27 10:45:20] 2025-07-27 14:44:50,142 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 10:45:20] 2025-07-27 14:44:50,142 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 10:45:20] 2025-07-27 14:44:50,142 | INFO     | update_server=False
[2025-07-27 10:45:20] 2025-07-27 14:44:50,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 10:45:20] 2025-07-27 14:44:50,143 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:45:20] 2025-07-27 14:44:50,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:45:20] 2025-07-27 14:44:50,143 | INFO     | aborting loop
[2025-07-27 10:45:20] 2025-07-27 14:44:50,239 | INFO     | all payload control threads have been joined
[2025-07-27 10:45:20] 2025-07-27 14:44:50,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 10:45:20] 2025-07-27 14:44:50,592 | INFO     | all data control threads have been joined
[2025-07-27 10:45:20] 2025-07-27 14:44:51,147 | INFO     | [job] retrieve thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:51,148 | INFO     | [job] queue monitor thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:51,149 | INFO     | [job] job monitor thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:51,213 | INFO     | [job] validate thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:51,245 | INFO     | [payload] control thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:51,332 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:51,503 | INFO     | all job control threads have been joined
[2025-07-27 10:45:20] 2025-07-27 14:44:51,540 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:51,597 | INFO     | [data] control thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:51,700 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:51,790 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:52,024 | INFO     | [payload] failed_post thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:52,299 | INFO     | [data] copytool_in thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:52,376 | INFO     | [data] copytool_out thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:52,508 | INFO     | [job] control thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:52,558 | INFO     | [payload] validate_post thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:52,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 10:45:20] 2025-07-27 14:44:56,813 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 10:45:20] 2025-07-27 14:44:57,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489328645952)>', '<ExcThread(monitor, started 140488673830656)>']
[2025-07-27 10:45:20] 2025-07-27 14:45:02,731 | INFO     | all workflow threads have been joined
[2025-07-27 10:45:20] 2025-07-27 14:45:02,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 10:45:20] 2025-07-27 14:45:02,732 | INFO     | traces error code: 0
[2025-07-27 10:45:20] 2025-07-27 14:45:02,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 10:45:20] 2025-07-27 14:45:20,101 | INFO     | PID=53849 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 10:45:20] 2025-07-27 14:45:20,102 | INFO     | .. there are 6 such processes running
[2025-07-27 10:45:20] 2025-07-27 14:45:20,102 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 10:45:20] 2025-07-27 14:45:20,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 10:45:20] 2025-07-27 14:45:20,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 10:45:20] 2025-07-27 14:45:20,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 10:45:20] 2025-07-27 14:45:20,103 | INFO     | [monitor] control thread has ended
[2025-07-27 10:45:20] 2025-07-27 14:45:20,319 [wrapper] ==== pilot stdout END ====
[2025-07-27 10:45:20] 2025-07-27 14:45:20,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 10:45:20] 2025-07-27 14:45:20,329 [wrapper] pilotpid: 53849
[2025-07-27 10:45:20] 2025-07-27 14:45:20,332 [wrapper] Pilot exit status: 0
[2025-07-27 10:45:20] 2025-07-27 14:45:20,347 [wrapper] pandaids: 6745910102
[2025-07-27 10:45:20] 2025-07-27 14:45:20,396 [wrapper] cleanup supervisor_pilot  176420 53850
[2025-07-27 10:45:20] 2025-07-27 14:45:20,400 [wrapper] Test setup, not cleaning
[2025-07-27 10:45:20] 2025-07-27 14:45:20,403 [wrapper] apfmon messages muted
[2025-07-27 10:45:20] 2025-07-27 14:45:20,407 [wrapper] ==== wrapper stdout END ====
[2025-07-27 10:45:20] 2025-07-27 14:45:20,410 [wrapper] ==== wrapper stderr END ====
[2025-07-27 10:45:20]  *** Error codes and diagnostics ***
[2025-07-27 10:45:20]     "exeErrorCode": 0,
[2025-07-27 10:45:20]     "exeErrorDiag": "",
[2025-07-27 10:45:20]     "pilotErrorCode": 0,
[2025-07-27 10:45:20]     "pilotErrorDiag": "",
[2025-07-27 10:45:20]  *** Listing of results directory ***
[2025-07-27 10:45:20] total 431576
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 19:58 pilot3.tar.gz
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 20:11 queuedata.json
[2025-07-27 10:45:20] -rwx------. 1 boincer umatlas     36292 Jul 26 20:12 runpilot2-wrapper.sh
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas       100 Jul 27 09:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 10:45:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 09:06 run_atlas
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas       105 Jul 27 09:06 job.xml
[2025-07-27 10:45:20] -rw-r--r--. 2 boincer umatlas 228093569 Jul 27 09:06 EVNT.45743347._000651.pool.root.1
[2025-07-27 10:45:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:06 start_atlas.sh
[2025-07-27 10:45:20] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 09:06 shared
[2025-07-27 10:45:20] -rw-r--r--. 2 boincer umatlas    542899 Jul 27 09:06 input.tar.gz
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas         0 Jul 27 09:06 boinc_lockfile
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 09:06 pandaJob.out
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas    980117 Jul 27 09:06 agis_schedconf.cvmfs.json
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas   1593052 Jul 27 09:06 agis_ddmendpoints.agis.ALL.json
[2025-07-27 10:45:20] drwx------. 4 boincer umatlas      4096 Jul 27 09:06 pilot3
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas      6657 Jul 27 10:36 init_data.xml
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas 208123384 Jul 27 10:43 HITS.45743349._045551.pool.root.1
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas       529 Jul 27 10:44 boinc_task_state.xml
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas        95 Jul 27 10:44 pilot_heartbeat.json
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas      1036 Jul 27 10:44 memory_monitor_summary.json
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas    354429 Jul 27 10:44 log.45743349._045551.job.log.tgz.1
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas      7816 Jul 27 10:44 heartbeat.json
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 10:45 boinc_mmap_file
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas        27 Jul 27 10:45 wrapper_checkpoint.txt
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas       820 Jul 27 10:45 pilotlog.txt
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas    568904 Jul 27 10:45 log.45743349._045551.job.log.1
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas       357 Jul 27 10:45 output.list
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas       620 Jul 27 10:45 runtime_log
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas    942080 Jul 27 10:45 result.tar.gz
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas       652 Jul 27 10:45 zvsKDmwA4z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgbTLDmcSvBom.diag
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas      8657 Jul 27 10:45 runtime_log.err
[2025-07-27 10:45:20] -rw-r--r--. 1 boincer umatlas     21895 Jul 27 10:45 stderr.txt
[2025-07-27 10:45:20] HITS file was successfully produced:
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas 208123384 Jul 27 10:43 shared/HITS.pool.root.1
[2025-07-27 10:45:20]  *** Contents of shared directory: ***
[2025-07-27 10:45:20] total 427468
[2025-07-27 10:45:20] -rw-r--r--. 2 boincer umatlas 228093569 Jul 27 09:06 ATLAS.root_0
[2025-07-27 10:45:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:06 start_atlas.sh
[2025-07-27 10:45:20] -rw-r--r--. 2 boincer umatlas    542899 Jul 27 09:06 input.tar.gz
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas 208123384 Jul 27 10:43 HITS.pool.root.1
[2025-07-27 10:45:20] -rw-------. 1 boincer umatlas    942080 Jul 27 10:45 result.tar.gz
10:45:22 (50172): run_atlas exited; CPU time 53915.362398
10:45:22 (50172): called boinc_finish(0)

</stderr_txt>
]]>

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