Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:09:50 (3948878): wrapper (7.7.26015): starting
09:09:50 (3948878): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 09:09:50] Arguments: --nthreads 8
[2025-07-27 09:09:50] Threads: 8
[2025-07-27 09:09:50] Checking for CVMFS
[2025-07-27 09:09:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:09:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:09:51] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:09:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:09:51] 2.13.1.0 5036 14024 261668 148812 3 196 35759132 40960000 10409 16776704 0 72595386 99.766 68335961 33634 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 09:09:51] CVMFS is ok
[2025-07-27 09:09:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 09:09:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 09:09:51] Further information can be found at the LHC@home message board.
[2025-07-27 09:09:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:09:51] Checking for apptainer binary...
[2025-07-27 09:09:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:09:51] Running /usr/bin/apptainer --version
[2025-07-27 09:09:51] apptainer version 1.4.1-1.el9
[2025-07-27 09:09:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:09:51] c-212-2.aglt2.org
[2025-07-27 09:09:51] apptainer works
[2025-07-27 09:09:51] Set ATHENA_PROC_NUMBER=8
[2025-07-27 09:09:51] Set ATHENA_CORE_NUMBER=8
[2025-07-27 09:09:51] Starting ATLAS job with PandaID=6745950244
[2025-07-27 09:09:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 10:42:17]  *** The last 200 lines of the pilot log: ***
[2025-07-27 10:42:17]  is_tar=False
[2025-07-27 10:42:17]  lfn=log.45759738._000016.job.log.tgz.1
[2025-07-27 10:42:17]  mtime=0
[2025-07-27 10:42:17]  protocol_id=None
[2025-07-27 10:42:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 10:42:17]  replicas=None
[2025-07-27 10:42:17]  scope=mc23_13p6TeV
[2025-07-27 10:42:17]  status=None
[2025-07-27 10:42:17]  status_code=0
[2025-07-27 10:42:17]  storage_token=
[2025-07-27 10:42:17]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6745950244/log.45759738._000016.job.log.tgz.1
[2025-07-27 10:42:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/cf/log.45759738._000016.job.log.tgz.1
[2025-07-27 10:42:17]  workdir=None
[2025-07-27 10:42:17] ]
[2025-07-27 10:42:17] 2025-07-27 14:41:36,953 | INFO     | transferring file log.45759738._000016.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6745950244/log.45759738._000016.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 10:42:17] 2025-07-27 14:41:36,953 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6745950244/log.45759738._000016.job.log.tgz.1 /tmp/boinchome/slots/2/log.45759738._000016.job
[2025-07-27 10:42:17] 2025-07-27 14:41:36,977 | INFO     | adding to output.list: log.45759738._000016.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/cf/log.45759738._000016.job.log.tg
[2025-07-27 10:42:17] 2025-07-27 14:41:36,977 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 10:42:17] 2025-07-27 14:41:36,977 | INFO     | summary of transferred files:
[2025-07-27 10:42:17] 2025-07-27 14:41:36,977 | INFO     |  -- lfn=log.45759738._000016.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 10:42:17] 2025-07-27 14:41:36,977 | INFO     | stage-out finished correctly
[2025-07-27 10:42:17] 2025-07-27 14:41:37,924 | INFO     | monitor loop #402: job 0:6745950244 is in state 'finished'
[2025-07-27 10:42:17] 2025-07-27 14:41:37,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 10:42:17] 2025-07-27 14:41:38,443 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 10:42:17] 2025-07-27 14:41:38,496 | INFO     | job 6745950244 has state=finished
[2025-07-27 10:42:17] 2025-07-27 14:41:38,497 | INFO     | preparing for final server update for job 6745950244 in state='finished'
[2025-07-27 10:42:17] 2025-07-27 14:41:38,497 | INFO     | this job has now completed (state=finished)
[2025-07-27 10:42:17] 2025-07-27 14:41:38,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 10:42:17] 2025-07-27 14:41:38,497 | INFO     | log transfer has been attempted: DONE
[2025-07-27 10:42:17] 2025-07-27 14:41:38,497 | INFO     | job 6745950244 has finished - writing final server update
[2025-07-27 10:42:17] 2025-07-27 14:41:38,498 | INFO     | total number of processed events: 400 (read)
[2025-07-27 10:42:17] 2025-07-27 14:41:38,498 | INFO     | executing command: lscpu
[2025-07-27 10:42:17] 2025-07-27 14:41:38,565 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 10:42:17] 2025-07-27 14:41:40,427 | INFO     | monitor loop #403: job 0:6745950244 is in state 'finished'
[2025-07-27 10:42:17] 2025-07-27 14:41:40,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 10:42:17] 2025-07-27 14:41:42,930 | INFO     | monitor loop #404: job 0:6745950244 is in state 'finished'
[2025-07-27 10:42:17] 2025-07-27 14:41:42,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 10:42:17] 2025-07-27 14:41:43,445 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 10:42:17] 2025-07-27 14:41:43,451 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3311.8292291666658
[2025-07-27 10:42:17] 2025-07-27 14:41:43,465 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745950244/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 10:42:17] 2025-07-27 14:41:43,466 | INFO     | extracted standard info from prmon json
[2025-07-27 10:42:17] 2025-07-27 14:41:43,467 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 10:42:17] 2025-07-27 14:41:43,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 10:42:17] 2025-07-27 14:41:43,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 10:42:17] 2025-07-27 14:41:43,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 10:42:17] 2025-07-27 14:41:43,469 | INFO     | fitting pss+swap vs Time
[2025-07-27 10:42:17] 2025-07-27 14:41:43,470 | INFO     | sum of square deviations: 177275882.0
[2025-07-27 10:42:17] 2025-07-27 14:41:43,470 | INFO     | sum of deviations: 760538179.0
[2025-07-27 10:42:17] 2025-07-27 14:41:43,470 | INFO     | mean x: 1753624652.0
[2025-07-27 10:42:17] 2025-07-27 14:41:43,470 | INFO     | mean y: 2527643.2409638553
[2025-07-27 10:42:17] 2025-07-27 14:41:43,470 | INFO     | -- intersect: -7520765905.971719
[2025-07-27 10:42:17] 2025-07-27 14:41:43,470 | INFO     | intersect: -7520765905.971719
[2025-07-27 10:42:17] 2025-07-27 14:41:43,470 | INFO     | chi2: 0.0005957817301949695
[2025-07-27 10:42:17] 2025-07-27 14:41:43,470 | INFO     | -- intersect: -7520765905.971719
[2025-07-27 10:42:17] 2025-07-27 14:41:43,471 | INFO     | current memory leak: 4.29 B/s (using 83 data points, chi2=0.00)
[2025-07-27 10:42:17] 2025-07-27 14:41:43,471 | INFO     | could have reported an average CPU frequency of 3292 MHz (7 samples)
[2025-07-27 10:42:17] 2025-07-27 14:41:43,471 | INFO     | ..............................
[2025-07-27 10:42:17] 2025-07-27 14:41:43,471 | INFO     | . Timing measurements:
[2025-07-27 10:42:17] 2025-07-27 14:41:43,471 | INFO     | . get job = 0 s
[2025-07-27 10:42:17] 2025-07-27 14:41:43,471 | INFO     | . initial setup = 2 s
[2025-07-27 10:42:17] 2025-07-27 14:41:43,471 | INFO     | . payload setup = 11 s
[2025-07-27 10:42:17] 2025-07-27 14:41:43,472 | INFO     | . stage-in = 0 s
[2025-07-27 10:42:17] 2025-07-27 14:41:43,472 | INFO     | . payload execution = 5454 s
[2025-07-27 10:42:17] 2025-07-27 14:41:43,472 | INFO     | . stage-out = 0 s
[2025-07-27 10:42:17] 2025-07-27 14:41:43,472 | INFO     | . log creation = 0 s
[2025-07-27 10:42:17] 2025-07-27 14:41:43,472 | INFO     | ..............................
[2025-07-27 10:42:17] 2025-07-27 14:41:43,554 | INFO     | 
[2025-07-27 10:42:17] 2025-07-27 14:41:43,555 | INFO     | job summary report
[2025-07-27 10:42:17] 2025-07-27 14:41:43,555 | INFO     | --------------------------------------------------
[2025-07-27 10:42:17] 2025-07-27 14:41:43,555 | INFO     | PanDA job id: 6745950244
[2025-07-27 10:42:17] 2025-07-27 14:41:43,555 | INFO     | task id: 45759738
[2025-07-27 10:42:17] 2025-07-27 14:41:43,555 | INFO     | errors: (none)
[2025-07-27 10:42:17] 2025-07-27 14:41:43,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 10:42:17] 2025-07-27 14:41:43,555 | INFO     | pilot state: finished 
[2025-07-27 10:42:17] 2025-07-27 14:41:43,555 | INFO     | transexitcode: 0
[2025-07-27 10:42:17] 2025-07-27 14:41:43,555 | INFO     | exeerrorcode: 0
[2025-07-27 10:42:17] 2025-07-27 14:41:43,555 | INFO     | exeerrordiag: 
[2025-07-27 10:42:17] 2025-07-27 14:41:43,555 | INFO     | exitcode: 0
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | exitmsg: OK
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | cpuconsumptiontime: 39898 s
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | nevents: 400
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | neventsw: 0
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | pid: 3960301
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | pgrp: 3960301
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | corecount: 8
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | event service: False
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | sizes: {0: 2397459, 7: 2397721, 11: 2397749, 5469: 2424369, 5471: 2433367, 5472: 2433423, 5477: 2433745}
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | --------------------------------------------------
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | 
[2025-07-27 10:42:17] 2025-07-27 14:41:43,556 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 10:42:17] 2025-07-27 14:41:43,585 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,585 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,585 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,587 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,587 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 10:42:17] 2025-07-27 14:41:43,587 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,587 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 10:42:17] 2025-07-27 14:41:43,587 | INFO     | job 6745950244 has completed (purged errors)
[2025-07-27 10:42:17] 2025-07-27 14:41:43,587 | INFO     | overall cleanup function is called
[2025-07-27 10:42:17] 2025-07-27 14:41:44,592 | INFO     | --- collectZombieJob: --- 10, [3960301]
[2025-07-27 10:42:17] 2025-07-27 14:41:44,593 | INFO     | zombie collector waiting for pid 3960301
[2025-07-27 10:42:17] 2025-07-27 14:41:44,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 10:42:17] 2025-07-27 14:41:44,593 | INFO     | collected zombie processes
[2025-07-27 10:42:17] 2025-07-27 14:41:44,593 | INFO     | will attempt to kill all subprocesses of pid=3960301
[2025-07-27 10:42:17] 2025-07-27 14:41:44,958 | INFO     | process IDs to be killed: [3960301] (in reverse order)
[2025-07-27 10:42:17] 2025-07-27 14:41:45,094 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 10:42:17] 2025-07-27 14:41:45,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 10:42:17] 2025-07-27 14:41:45,110 | INFO     | did not find any defunct processes belonging to 3960301
[2025-07-27 10:42:17] 2025-07-27 14:41:45,122 | INFO     | did not find any defunct processes belonging to 3960301
[2025-07-27 10:42:17] 2025-07-27 14:41:45,122 | INFO     | ready for new job
[2025-07-27 10:42:17] 2025-07-27 14:41:45,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 10:42:17] 2025-07-27 14:41:45,124 | INFO     | ***************************************
[2025-07-27 10:42:17] 2025-07-27 14:41:45,124 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 10:42:17] 2025-07-27 14:41:45,124 | INFO     | ***************************************
[2025-07-27 10:42:17] 2025-07-27 14:41:45,124 | INFO     | 
[2025-07-27 10:42:17] 2025-07-27 14:41:45,129 | INFO     | architecture information:
[2025-07-27 10:42:17] 2025-07-27 14:41:45,130 | INFO     | executing command: cat /etc/os-release
[2025-07-27 10:42:17] 2025-07-27 14:41:45,150 | INFO     | cat /etc/os-release:
[2025-07-27 10:42:17] NAME="CentOS Linux"
[2025-07-27 10:42:17] VERSION="7 (Core)"
[2025-07-27 10:42:17] ID="centos"
[2025-07-27 10:42:17] ID_LIKE="rhel fedora"
[2025-07-27 10:42:17] VERSION_ID="7"
[2025-07-27 10:42:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 10:42:17] ANSI_COLOR="0;31"
[2025-07-27 10:42:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 10:42:17] HOME_URL="https://www.centos.org/"
[2025-07-27 10:42:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 10:42:17] 
[2025-07-27 10:42:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 10:42:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 10:42:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 10:42:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 10:42:17] 
[2025-07-27 10:42:17] 2025-07-27 14:41:45,150 | INFO     | ***************************************
[2025-07-27 10:42:17] 2025-07-27 14:41:45,652 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 10:42:17] 2025-07-27 14:41:45,676 | INFO     | sufficient remaining disk space (123693170688 B)
[2025-07-27 10:42:17] 2025-07-27 14:41:45,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 10:42:17] 2025-07-27 14:41:45,677 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 10:42:17] 2025-07-27 14:41:45,677 | INFO     | update_server=False
[2025-07-27 10:42:17] 2025-07-27 14:41:45,677 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 10:42:17] 2025-07-27 14:41:45,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 10:42:17] 2025-07-27 14:41:46,151 | INFO     | all job control threads have been joined
[2025-07-27 10:42:17] 2025-07-27 14:41:46,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:42:17] 2025-07-27 14:41:46,439 | INFO     | aborting loop
[2025-07-27 10:42:17] 2025-07-27 14:41:46,476 | INFO     | all data control threads have been joined
[2025-07-27 10:42:17] 2025-07-27 14:41:46,675 | INFO     | all payload control threads have been joined
[2025-07-27 10:42:17] 2025-07-27 14:41:46,682 | INFO     | [job] retrieve thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:46,807 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:46,938 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:47,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:47,156 | INFO     | [job] control thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:47,263 | INFO     | [payload] failed_post thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:47,396 | INFO     | [payload] validate_post thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:47,444 | INFO     | [job] job monitor thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:47,481 | INFO     | [data] control thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:47,682 | INFO     | [payload] control thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:47,683 | INFO     | [data] copytool_out thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:47,981 | INFO     | [job] validate thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:47,998 | INFO     | [data] copytool_in thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:48,123 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:48,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:42:17] 2025-07-27 14:41:49,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 10:42:17] 2025-07-27 14:41:49,569 | INFO     | [job] queue monitor thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:53,011 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 10:42:17] 2025-07-27 14:41:53,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140410204489536)>', '<ExcThread(monitor, started 140409728661248)>']
[2025-07-27 10:42:17] 2025-07-27 14:41:58,120 | INFO     | all workflow threads have been joined
[2025-07-27 10:42:17] 2025-07-27 14:41:58,120 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 10:42:17] 2025-07-27 14:41:58,121 | INFO     | traces error code: 0
[2025-07-27 10:42:17] 2025-07-27 14:41:58,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 10:42:17] 2025-07-27 14:42:16,952 | INFO     | PID=3952933 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 10:42:17] 2025-07-27 14:42:16,953 | INFO     | .. there are 13 such processes running
[2025-07-27 10:42:17] 2025-07-27 14:42:16,954 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 10:42:17] 2025-07-27 14:42:16,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 10:42:17] 2025-07-27 14:42:16,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 10:42:17] 2025-07-27 14:42:16,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 10:42:17] 2025-07-27 14:42:16,954 | INFO     | [monitor] control thread has ended
[2025-07-27 10:42:17] 2025-07-27 14:42:17,107 [wrapper] ==== pilot stdout END ====
[2025-07-27 10:42:17] 2025-07-27 14:42:17,110 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 10:42:17] 2025-07-27 14:42:17,113 [wrapper] pilotpid: 3952933
[2025-07-27 10:42:17] 2025-07-27 14:42:17,117 [wrapper] Pilot exit status: 0
[2025-07-27 10:42:17] 2025-07-27 14:42:17,130 [wrapper] pandaids: 6745950244
[2025-07-27 10:42:17] 2025-07-27 14:42:17,208 [wrapper] cleanup supervisor_pilot  102515 3952934
[2025-07-27 10:42:17] 2025-07-27 14:42:17,212 [wrapper] Test setup, not cleaning
[2025-07-27 10:42:17] 2025-07-27 14:42:17,216 [wrapper] apfmon messages muted
[2025-07-27 10:42:17] 2025-07-27 14:42:17,219 [wrapper] ==== wrapper stdout END ====
[2025-07-27 10:42:17] 2025-07-27 14:42:17,222 [wrapper] ==== wrapper stderr END ====
[2025-07-27 10:42:17]  *** Error codes and diagnostics ***
[2025-07-27 10:42:17]     "exeErrorCode": 0,
[2025-07-27 10:42:17]     "exeErrorDiag": "",
[2025-07-27 10:42:17]     "pilotErrorCode": 0,
[2025-07-27 10:42:17]     "pilotErrorDiag": "",
[2025-07-27 10:42:17]  *** Listing of results directory ***
[2025-07-27 10:42:17] total 409816
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 21:40 pilot3.tar.gz
[2025-07-27 10:42:17] -rwx------. 1 boincer umatlas     36292 Jul 26 22:14 runpilot2-wrapper.sh
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 22:14 queuedata.json
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas       100 Jul 27 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 10:42:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 09:09 run_atlas
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas       105 Jul 27 09:09 job.xml
[2025-07-27 10:42:17] -rw-r--r--. 2 boincer umatlas 240431336 Jul 27 09:09 EVNT.45759733._000001.pool.root.1
[2025-07-27 10:42:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:09 start_atlas.sh
[2025-07-27 10:42:17] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 09:09 shared
[2025-07-27 10:42:17] -rw-r--r--. 2 boincer umatlas    542866 Jul 27 09:09 input.tar.gz
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas         0 Jul 27 09:09 boinc_lockfile
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas      2553 Jul 27 09:09 pandaJob.out
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas    980117 Jul 27 09:10 agis_schedconf.cvmfs.json
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas   1593052 Jul 27 09:10 agis_ddmendpoints.agis.ALL.json
[2025-07-27 10:42:17] drwx------. 4 boincer umatlas      4096 Jul 27 09:10 pilot3
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas      6945 Jul 27 10:36 init_data.xml
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas 173645295 Jul 27 10:41 HITS.45759738._000016.pool.root.1
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas       529 Jul 27 10:41 boinc_task_state.xml
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas      1026 Jul 27 10:41 memory_monitor_summary.json
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas    317197 Jul 27 10:41 log.45759738._000016.job.log.tgz.1
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas      7752 Jul 27 10:41 heartbeat.json
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 10:42 boinc_mmap_file
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas        27 Jul 27 10:42 wrapper_checkpoint.txt
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas        95 Jul 27 10:42 pilot_heartbeat.json
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas       823 Jul 27 10:42 pilotlog.txt
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas    530360 Jul 27 10:42 log.45759738._000016.job.log.1
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas       357 Jul 27 10:42 output.list
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas       620 Jul 27 10:42 runtime_log
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas    870400 Jul 27 10:42 result.tar.gz
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 10:42 runtime_log.err
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas       650 Jul 27 10:42 aWiNDmw45z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJtTLDmv5g6rm.diag
[2025-07-27 10:42:17] -rw-r--r--. 1 boincer umatlas     21596 Jul 27 10:42 stderr.txt
[2025-07-27 10:42:17] HITS file was successfully produced:
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas 173645295 Jul 27 10:41 shared/HITS.pool.root.1
[2025-07-27 10:42:17]  *** Contents of shared directory: ***
[2025-07-27 10:42:17] total 405780
[2025-07-27 10:42:17] -rw-r--r--. 2 boincer umatlas 240431336 Jul 27 09:09 ATLAS.root_0
[2025-07-27 10:42:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 09:09 start_atlas.sh
[2025-07-27 10:42:17] -rw-r--r--. 2 boincer umatlas    542866 Jul 27 09:09 input.tar.gz
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas 173645295 Jul 27 10:41 HITS.pool.root.1
[2025-07-27 10:42:17] -rw-------. 1 boincer umatlas    870400 Jul 27 10:42 result.tar.gz
10:42:18 (3948878): run_atlas exited; CPU time 40052.419612
10:42:18 (3948878): called boinc_finish(0)

</stderr_txt>
]]>

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